Rroxscaffold_5G00367340

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000660
Physical Location & Seq
Forward (+)
49194075 .. 49200102
6028 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00367340.1

Sequence Viewer

Length: 1590 bp
ATGGACACTCCGCCGCCGCCGGAGGAGCTGCTGAAGAAGATCCAGGTACTGGAGGAGGGTCAGGAGCACCTGAAGCAGGAGATGTCCAAGCTCCGGAACAACTCCGATGCTAAGTCCGAGCACCCGAGGGCCCACTCGGTCTCGCCGCAGCGGTCCAGATTCTCGTCTTTGCCCAAGAGGAGAGTCGCCGGGGGCGGCGCCGGAGCCGACTCGGCGGGTTGGAAGAGAGGGTCTACTTCGTTTCGGCATTCTTCGCCGCTGCAGAGGGAGAGCCGCAGCCATGATCCTCCGACCGGCGGCAGCGGCCGCGCCGGCGATGATTTTAGAGGTGGAGGTGGTAGCGGGCCGTCGGCGGTGAACTTTACTGATAGGCAGTATCTGAATATATTGCAGTCCATTGGGCAGTCTGTGCATATTTTTGATCCTCATGGTCGTATAATTTACTGGAACAAAACAGCTGAAGCTATGTATGGTTATTCAGCGGCAGAGGCCCTTGGACGGGATCCCATTGAGTTCTTAACAGATCCCCAGGACCATGTTCTAGGACATAATATAATCCAAAGAGTCACCAAGGGGGAGAGCTGGACAGGGCACTTCCCTGTCAAGAACAAAAAGGGGGAGAGATTTTCAGCTACTATAACGAATACTCCATTCTATGATGATGATGGCACTTTTATTGGGGTTATTTGTGTGTCAAGTGATACGAGGCTATTTCAAGAAATGAGCGTCCCTTTTTCAGGGCTGACGCACCCTGAACCAGATTCAAGCTTCAGTCGTACTAAAGCTACTGTTACAACTAAACTTGGCCTTGATCCTCAGCAGCCTCTGCAAACTGCAATTGCATCGAAAATTACACATTTGGCATCCAAGATGAGCAACAAAGTCAAGTCGAAAATTCGGGCAGGAGAAAACTATATGGATCGGGAAGGTGGGAGTGTAGATAGTCATCATTCTGATCATGGTTCGGACTGTGACCACCGGGAGGATGCAAATTCAAGTGGGGCTAGCACACCTAGAGGAGATATAGCCCCATCTCCTTTTGGTGTGTTTTCCCAGATGGATGAAAAGTCTCCAGGAAAACCTTCCAGAGATTCTGGCGATGAGAGTGAAGGAAAACCGCCAATGCACAAGGTAATATCCTCAAAGGCAGAAGCATGGATTGGTAAGAAAGGGATAACTTGGCCATGGAAAGGAAATGAGCGAGAAGGGTCAGAGGTTAAGACCCCTCGTTTTCTTTGGCCTTGGTTGCAAAATGAACAAGAGAATGATCCAGTTCCTCAGAAGAATAATTGTGGTTTAAAACCTGACAATTACGCAACTGAAAGTAATCGACATGCAACTAATGAGGCTTCAGGATCCTGGACCTCCTCATTTAATGTTAACAGCACAAGCAGTGCCAGCAGCTGTGGAAGCACCAGCAGTACTGTGAATAAGGTAGACGTGGACACTGATTGCTTGGATTACGAAATCTTGTGGGAAGACTTGGCAATTGGAGAACAGATTGGGCAAGGTTCATGTGGAACTGTATACCATGGTCTGTGGATGTTGCTGTCAAGGTATTCTCCAGGCAAGAATATTCAGAAGATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAS PAS_9 Pkinase_Tyr

Protein Analysis

529

Amino Acids

57.89

Weight (kDa)

6.45

Isoelectric Point (pI)

56.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS PF00989 125 - 234 5e-14 PAS fold
PAS_8 PF13188 125 - 177 3.9e-06 PAS domain
PAS_4 PF08448 131 - 235 2.4e-13 PAS fold
PAS_9 PF13426 139 - 234 2.9e-13 PAS domain
PAS_3 PF08447 146 - 231 1e-06 PAS fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 197
AccB7I CCANNNNNTGG 1 cut(s) 49
AccI GTMKAC 3 cut(s) 233, 1437, 1527
AccII CGCG 1 cut(s) 309
AccIII TCCGGA 1 cut(s) 93
AcoI YGGCCR 2 cut(s) 304, 1181
AcsI RAATTY 2 cut(s) 894, 991
AcuI CTGAAG 5 cut(s) 53, 92, 480, 754, 1335
AcyI GRCGYC 1 cut(s) 198
AfaI GTAC 3 cut(s) 48, 778, 1423
AgsI TTSAA 3 cut(s) 716, 765, 996
AjiI CACGTC 1 cut(s) 1441
AjnI CCWGG 5 cut(s) 42, 528, 1072, 1358, 1564
AjuI GAANNNNNNNTTGG 2 cut(s) 1143, 1175
AluBI AGCT 9 cut(s) 28, 91, 458, 464, 582, 632, 768, 785, 1404
AluI AGCT 9 cut(s) 28, 91, 458, 464, 582, 632, 768, 785, 1404
Alw21I GWGCWC 2 cut(s) 69, 123
Alw26I GTCTC 2 cut(s) 145, 1074
AlwNI CAGNNNCTG 4 cut(s) 49, 379, 826, 1404
Ama87I CYCGRG 1 cut(s) 124
Aor13HI TCCGGA 1 cut(s) 93
AoxI GGCC 7 cut(s) 129, 304, 344, 489, 805, 1181, 1238
ApaI GGGCCC 1 cut(s) 133
ApeKI GCWGC 7 cut(s) 28, 148, 259, 276, 300, 820, 1401
ApoI RAATTY 2 cut(s) 894, 991
Asp700I GAANNNNTTC 1 cut(s) 1081
AspLEI GCGC 2 cut(s) 200, 311
AspS9I GGNCC 7 cut(s) 129, 130, 153, 344, 490, 532, 1362
AsuC2I CCSGG 2 cut(s) 190, 980
AsuHPI GGTGA 2 cut(s) 367, 559
AsuNHI GCTAGC 1 cut(s) 1004
AvaI CYCGRG 1 cut(s) 124
AvaII GGWCC 3 cut(s) 153, 532, 1362
BaeGI GKGCMC 2 cut(s) 133, 594
BalI TGGCCA 1 cut(s) 1183
BamHI GGATCC 2 cut(s) 502, 1355
BanI GGYRCC 1 cut(s) 197
BanII GRGCYC 1 cut(s) 133
BbsI GAAGAC 1 cut(s) 1485
Bbv12I GWGCWC 2 cut(s) 69, 123
BbvCI CCTCAGC 1 cut(s) 816
BbvI GCAGC 7 cut(s) 15, 160, 246, 288, 312, 832, 1413
BccI CCATC 3 cut(s) 659, 1039, 1051
BceAI ACGGC 1 cut(s) 331
BcgI CGANNNNNNTGC 2 cut(s) 825, 859
BciT130I CCWGG 5 cut(s) 44, 530, 1074, 1360, 1566
BclI TGATCA 1 cut(s) 955
BcnI CCSGG 2 cut(s) 190, 980
BcoDI GTCTC 2 cut(s) 145, 1074
BfaI CTAG 3 cut(s) 542, 1005, 1014
BfmI CTRYAG 1 cut(s) 260
BfoI RGCGCY 1 cut(s) 201
BglI GCCNNNNNGGC 2 cut(s) 212, 312
BmcAI AGTACT 1 cut(s) 1423
Bme1390I CCNGG 7 cut(s) 44, 190, 530, 980, 1074, 1360, 1566
Bme18I GGWCC 3 cut(s) 153, 532, 1362
BmeT110I CYCGRG 1 cut(s) 124
BmgBI CACGTC 1 cut(s) 1441
BmgT120I GGNCC 7 cut(s) 129, 130, 153, 344, 490, 532, 1362
BmiI GGNNCC 5 cut(s) 131, 199, 205, 504, 1357
BmrFI CCNGG 7 cut(s) 44, 190, 530, 980, 1074, 1360, 1566
BmsI GCATC 4 cut(s) 97, 851, 872, 976
BmtI GCTAGC 1 cut(s) 1008
BpiI GAAGAC 1 cut(s) 1485
BpmI CTGGAG 3 cut(s) 71, 1056, 1548
Bpu10I CCTNAGC 1 cut(s) 816
BpuMI CCSGG 2 cut(s) 190, 980
BsaBI GATNNNNATC 1 cut(s) 945
BsaHI GRCGYC 1 cut(s) 198
BsaI GGTCTC 1 cut(s) 145
BsaJI CCNNGG 8 cut(s) 125, 189, 493, 528, 570, 1184, 1241, 1531
BsaWI WCCGGW 1 cut(s) 93
BsaXI ACNNNNNCTCC 2 cut(s) 631, 661
Bse118I RCCGGY 2 cut(s) 293, 311
Bse1I ACTGG 3 cut(s) 54, 449, 1271
Bse8I GATNNNNATC 1 cut(s) 945
BseAI TCCGGA 1 cut(s) 93
BseBI CCWGG 5 cut(s) 44, 530, 1074, 1360, 1566
BseDI CCNNGG 8 cut(s) 125, 189, 493, 528, 570, 1184, 1241, 1531
BseGI GGATG 4 cut(s) 863, 991, 1066, 1548
BseJI GATNNNNATC 1 cut(s) 945
BseMII CTCAG 2 cut(s) 830, 1292
BseNI ACTGG 3 cut(s) 54, 449, 1271
BseRI GAGGAG 5 cut(s) 38, 68, 193, 1032, 1357
BseSI GKGCMC 2 cut(s) 133, 594
BseX3I CGGCCG 1 cut(s) 304
BseXI GCAGC 7 cut(s) 15, 160, 246, 288, 312, 832, 1413
Bsh1236I CGCG 1 cut(s) 309
Bsh1285I CGRYCG 2 cut(s) 294, 307
BshFI GGCC 7 cut(s) 131, 306, 346, 491, 807, 1183, 1240
BshNI GGYRCC 1 cut(s) 197
BsiEI CGRYCG 2 cut(s) 294, 307
BsiHKAI GWGCWC 2 cut(s) 69, 123
BsiHKCI CYCGRG 1 cut(s) 124
BsiSI CCGG 7 cut(s) 20, 94, 189, 201, 294, 312, 979
BslFI GGGAC 1 cut(s) 713
BsmAI GTCTC 2 cut(s) 145, 1074
BsmFI GGGAC 1 cut(s) 713
BsmI GAATGC 1 cut(s) 247
BsnI GGCC 7 cut(s) 131, 306, 346, 491, 807, 1183, 1240
Bso31I GGTCTC 1 cut(s) 145
BsoBI CYCGRG 1 cut(s) 124
Bsp120I GGGCCC 1 cut(s) 129
Bsp1286I GDGCHC 4 cut(s) 69, 123, 133, 594
Bsp13I TCCGGA 1 cut(s) 93
Bsp19I CCATGG 2 cut(s) 1184, 1531
BspANI GGCC 7 cut(s) 131, 306, 346, 491, 807, 1183, 1240
BspCNI CTCAG 2 cut(s) 829, 1291
BspEI TCCGGA 1 cut(s) 93
BspFNI CGCG 1 cut(s) 309
BspLI GGNNCC 5 cut(s) 131, 199, 205, 504, 1357
BspMAI CTGCAG 1 cut(s) 264
BspOI GCTAGC 1 cut(s) 1008
BspT107I GGYRCC 1 cut(s) 197
BspTNI GGTCTC 1 cut(s) 145
BsrFI RCCGGY 2 cut(s) 293, 311
BsrI ACTGG 3 cut(s) 54, 449, 1271
BssAI RCCGGY 2 cut(s) 293, 311
BssECI CCNNGG 8 cut(s) 125, 189, 493, 528, 570, 1184, 1241, 1531
BssNAI GTATAC 1 cut(s) 1528
BssNI GRCGYC 1 cut(s) 198
BssT1I CCWWGG 5 cut(s) 493, 570, 1184, 1241, 1531
Bst1107I GTATAC 1 cut(s) 1528
Bst2UI CCWGG 5 cut(s) 44, 530, 1074, 1360, 1566
Bst4CI ACNGT 4 cut(s) 790, 971, 1426, 1525
Bst6I CTCTTC 1 cut(s) 218
BstACI GRCGYC 1 cut(s) 198
BstAPI GCANNNNNTGC 2 cut(s) 409, 826
BstC8I GCNNGC 4 cut(s) 313, 344, 1006, 1399
BstDEI CTNAG 3 cut(s) 111, 816, 1278
BstDSI CCRYGG 2 cut(s) 1184, 1531
BstENI CCTNNNNNAGG 2 cut(s) 74, 735
BstF5I GGATG 4 cut(s) 863, 991, 1066, 1548
BstFNI CGCG 1 cut(s) 309
BstH2I RGCGCY 1 cut(s) 201
BstHHI GCGC 2 cut(s) 200, 311
BstMAI GTCTC 2 cut(s) 145, 1074
BstMCI CGRYCG 2 cut(s) 294, 307
BstNI CCWGG 5 cut(s) 44, 530, 1074, 1360, 1566
BstNSI RCATGY 1 cut(s) 1337
BstSCI CCNGG 7 cut(s) 42, 188, 528, 978, 1072, 1358, 1564
BstSFI CTRYAG 1 cut(s) 260
BstSLI GKGCMC 2 cut(s) 133, 594
BstUI CGCG 1 cut(s) 309
BstV1I GCAGC 7 cut(s) 15, 160, 246, 288, 312, 832, 1413
BstV2I GAAGAC 1 cut(s) 1485
BstX2I RGATCY 4 cut(s) 39, 502, 523, 1355
BstYI RGATCY 4 cut(s) 39, 502, 523, 1355
BstZ17I GTATAC 1 cut(s) 1528
BstZI CGGCCG 1 cut(s) 304
BsuRI GGCC 7 cut(s) 131, 306, 346, 491, 807, 1183, 1240
BtgI CCRYGG 2 cut(s) 1184, 1531
BtgZI GCGATG 2 cut(s) 330, 1113
BtrI CACGTC 1 cut(s) 1441
BtsCI GGATG 4 cut(s) 863, 991, 1066, 1548
BtsI GCAGTG 1 cut(s) 1399
BtsIMutI CAGTG 2 cut(s) 1399, 1446
Cac8I GCNNGC 4 cut(s) 313, 344, 1006, 1399
CaiI CAGNNNCTG 4 cut(s) 49, 379, 826, 1404
CciNI GCGGCCGC 1 cut(s) 304
CfoI GCGC 2 cut(s) 200, 311
Cfr10I RCCGGY 2 cut(s) 293, 311
Cfr13I GGNCC 7 cut(s) 129, 130, 153, 344, 490, 532, 1362
CseI GACGC 2 cut(s) 715, 754
Csp6I GTAC 3 cut(s) 47, 777, 1422
CviAII CATG 9 cut(s) 281, 428, 536, 959, 1155, 1185, 1334, 1515, 1532
CviQI GTAC 3 cut(s) 47, 777, 1422
DdeI CTNAG 3 cut(s) 111, 816, 1278
DinI GGCGCC 1 cut(s) 199
DraI TTTAAA 1 cut(s) 1299
EaeI YGGCCR 2 cut(s) 304, 1181
EagI CGGCCG 1 cut(s) 304
Eam1104I CTCTTC 1 cut(s) 218
EarI CTCTTC 1 cut(s) 218
EclXI CGGCCG 1 cut(s) 304
Eco130I CCWWGG 5 cut(s) 493, 570, 1184, 1241, 1531
Eco24I GRGCYC 1 cut(s) 133
Eco31I GGTCTC 1 cut(s) 145
Eco47I GGWCC 3 cut(s) 153, 532, 1362
Eco52I CGGCCG 1 cut(s) 304
Eco57I CTGAAG 5 cut(s) 53, 92, 480, 754, 1335
Eco88I CYCGRG 1 cut(s) 124
EcoNI CCTNNNNNAGG 2 cut(s) 74, 735
EcoO109I RGGNCCY 2 cut(s) 129, 490
EcoRII CCWGG 5 cut(s) 42, 528, 1072, 1358, 1564
EcoT14I CCWWGG 5 cut(s) 493, 570, 1184, 1241, 1531
EcoT38I GRGCYC 1 cut(s) 133
EgeI GGCGCC 1 cut(s) 199
EheI GGCGCC 1 cut(s) 199
ErhI CCWWGG 5 cut(s) 493, 570, 1184, 1241, 1531
FaeI CATG 9 cut(s) 284, 431, 539, 962, 1158, 1188, 1337, 1518, 1535
FaqI GGGAC 1 cut(s) 713
FatI CATG 9 cut(s) 280, 427, 535, 958, 1154, 1184, 1333, 1514, 1531
FauI CCCGC 2 cut(s) 208, 335
FbaI TGATCA 1 cut(s) 955
FblI GTMKAC 3 cut(s) 233, 1437, 1527
FokI GGATG 4 cut(s) 850, 998, 1073, 1555
FriOI GRGCYC 1 cut(s) 133
FspBI CTAG 3 cut(s) 542, 1005, 1014
GlaI GCGC 2 cut(s) 199, 310
GsuI CTGGAG 3 cut(s) 71, 1056, 1548
HaeII RGCGCY 1 cut(s) 201
HaeIII GGCC 7 cut(s) 131, 306, 346, 491, 807, 1183, 1240
HapII CCGG 7 cut(s) 20, 94, 189, 201, 294, 312, 979
HgaI GACGC 2 cut(s) 715, 754
HhaI GCGC 2 cut(s) 200, 311
Hin1I GRCGYC 1 cut(s) 198
Hin1II CATG 9 cut(s) 284, 431, 539, 962, 1158, 1188, 1337, 1518, 1535
Hin6I GCGC 2 cut(s) 198, 309
HinP1I GCGC 2 cut(s) 198, 309
HincII GTYRAC 1 cut(s) 1381
HindII GTYRAC 1 cut(s) 1381
HindIII AAGCTT 1 cut(s) 766
HinfI GANTC 6 cut(s) 159, 183, 209, 564, 761, 1091
HpaI GTTAAC 1 cut(s) 1381
HpaII CCGG 7 cut(s) 20, 94, 189, 201, 294, 312, 979
HphI GGTGA 2 cut(s) 367, 559
Hpy166II GTNNAC 6 cut(s) 234, 358, 1381, 1438, 1444, 1528
Hpy188I TCNGA 9 cut(s) 106, 118, 291, 381, 955, 967, 1213, 1281, 1581
Hpy188III TCNNGA 8 cut(s) 62, 94, 156, 604, 716, 923, 1086, 1353
Hpy8I GTNNAC 6 cut(s) 234, 358, 1381, 1438, 1444, 1528
Hpy99I CGWCG 1 cut(s) 352
HpyAV CCTTC 4 cut(s) 920, 1092, 1103, 1199
HpyCH4III ACNGT 4 cut(s) 790, 971, 1426, 1525
HpyCH4IV ACGT 1 cut(s) 1440
HpyF3I CTNAG 3 cut(s) 111, 816, 1278
HpySE526I ACGT 1 cut(s) 1440
Hsp92I GRCGYC 1 cut(s) 198
Hsp92II CATG 9 cut(s) 284, 431, 539, 962, 1158, 1188, 1337, 1518, 1535
HspAI GCGC 2 cut(s) 198, 309
KasI GGCGCC 1 cut(s) 197
Kpn2I TCCGGA 1 cut(s) 93
KroI GCCGGC 1 cut(s) 311
KroNI GCCGGC 1 cut(s) 313
Ksp22I TGATCA 1 cut(s) 955
KspAI GTTAAC 1 cut(s) 1381
LmnI GCTCC 4 cut(s) 25, 64, 96, 203
Lsp1109I GCAGC 7 cut(s) 15, 160, 246, 288, 312, 832, 1413
LweI GCATC 4 cut(s) 97, 851, 872, 976
MaeI CTAG 3 cut(s) 542, 1005, 1014
MaeII ACGT 1 cut(s) 1440
MaeIII GTNAC 3 cut(s) 565, 790, 971
MboII GAAGA 6 cut(s) 46, 49, 235, 243, 1294, 1490
MfeI CAATTG 2 cut(s) 837, 1488
MflI RGATCY 4 cut(s) 39, 502, 523, 1355
MhlI GDGCHC 4 cut(s) 69, 123, 133, 594
MlsI TGGCCA 1 cut(s) 1183
MluCI AATT 8 cut(s) 438, 837, 849, 894, 991, 1288, 1309, 1488
MluNI TGGCCA 1 cut(s) 1183
Mly113I GGCGCC 1 cut(s) 198
MlyI GAGTC 3 cut(s) 192, 203, 573
MmeI TCCRAC 2 cut(s) 200, 314
Mox20I TGGCCA 1 cut(s) 1183
MreI CGCCGGCG 1 cut(s) 311
MroI TCCGGA 1 cut(s) 93
MroNI GCCGGC 1 cut(s) 311
MroXI GAANNNNTTC 1 cut(s) 1081
MscI TGGCCA 1 cut(s) 1183
MseI TTAA 5 cut(s) 518, 1218, 1298, 1374, 1380
Msp20I TGGCCA 1 cut(s) 1183
MspA1I CMGCKG 6 cut(s) 151, 259, 303, 458, 482, 1404
MspI CCGG 7 cut(s) 20, 94, 189, 201, 294, 312, 979
MspR9I CCNGG 7 cut(s) 44, 190, 530, 980, 1074, 1360, 1566
MunI CAATTG 2 cut(s) 837, 1488
Mva1269I GAATGC 1 cut(s) 247
MvaI CCWGG 5 cut(s) 44, 530, 1074, 1360, 1566
MvnI CGCG 1 cut(s) 309
NaeI GCCGGC 1 cut(s) 313
NarI GGCGCC 1 cut(s) 198
NciI CCSGG 2 cut(s) 190, 980
NcoI CCATGG 2 cut(s) 1184, 1531
NgoMIV GCCGGC 1 cut(s) 311
NheI GCTAGC 1 cut(s) 1004
NlaIII CATG 9 cut(s) 284, 431, 539, 962, 1158, 1188, 1337, 1518, 1535
NlaIV GGNNCC 5 cut(s) 131, 199, 205, 504, 1357
NmeAIII GCCGAG 1 cut(s) 191
NmuCI GTSAC 2 cut(s) 565, 971
NotI GCGGCCGC 1 cut(s) 304
NspI RCATGY 1 cut(s) 1337
PctI GAATGC 1 cut(s) 247
PdiI GCCGGC 1 cut(s) 313
PdmI GAANNNNTTC 1 cut(s) 1081
PfeI GAWTC 3 cut(s) 159, 761, 1091
PflMI CCANNNNNTGG 1 cut(s) 49
PfoI TCCNGGA 2 cut(s) 1072, 1358
PleI GAGTC 3 cut(s) 191, 203, 572
PluTI GGCGCC 1 cut(s) 201
PpsI GAGTC 3 cut(s) 191, 203, 572
Psp6I CCWGG 5 cut(s) 42, 528, 1072, 1358, 1564
PspGI CCWGG 5 cut(s) 42, 528, 1072, 1358, 1564
PspN4I GGNNCC 5 cut(s) 131, 199, 205, 504, 1357
PspOMI GGGCCC 1 cut(s) 129
PspPI GGNCC 7 cut(s) 129, 130, 153, 344, 490, 532, 1362
PstI CTGCAG 1 cut(s) 264
PstNI CAGNNNCTG 4 cut(s) 49, 379, 826, 1404
PsuI RGATCY 4 cut(s) 39, 502, 523, 1355
PvuII CAGCTG 2 cut(s) 458, 1404
RsaI GTAC 3 cut(s) 48, 778, 1423
RsaNI GTAC 3 cut(s) 47, 777, 1422
SaqAI TTAA 5 cut(s) 518, 1218, 1298, 1374, 1380
Sau96I GGNCC 7 cut(s) 129, 130, 153, 344, 490, 532, 1362
ScaI AGTACT 1 cut(s) 1423
SchI GAGTC 3 cut(s) 192, 203, 573
ScrFI CCNGG 7 cut(s) 44, 190, 530, 980, 1074, 1360, 1566
SduI GDGCHC 4 cut(s) 69, 123, 133, 594
SfaNI GCATC 4 cut(s) 97, 851, 872, 976
SfcI CTRYAG 1 cut(s) 260
SfoI GGCGCC 1 cut(s) 199
SgrAI CRCCGGYG 1 cut(s) 311
SinI GGWCC 3 cut(s) 153, 532, 1362
Sse9I AATT 8 cut(s) 438, 837, 849, 894, 991, 1288, 1309, 1488
SspDI GGCGCC 1 cut(s) 197
SspI AATATT 1 cut(s) 1576
SspMI CTAG 3 cut(s) 542, 1005, 1014
StyD4I CCNGG 7 cut(s) 42, 188, 528, 978, 1072, 1358, 1564
StyI CCWWGG 5 cut(s) 493, 570, 1184, 1241, 1531
TaaI ACNGT 4 cut(s) 790, 971, 1426, 1525
TaiI ACGT 1 cut(s) 1443
TaqI TCGA 3 cut(s) 845, 890, 1330
TaqII GACCGA 1 cut(s) 127
TasI AATT 8 cut(s) 438, 837, 849, 894, 991, 1288, 1309, 1488
TatI WGTACW 1 cut(s) 1421
TfiI GAWTC 3 cut(s) 159, 761, 1091
Tru1I TTAA 5 cut(s) 518, 1218, 1298, 1374, 1380
Tru9I TTAA 5 cut(s) 518, 1218, 1298, 1374, 1380
TscAI CASTG 2 cut(s) 1399, 1453
TseFI GTSAC 2 cut(s) 565, 971
TseI GCWGC 7 cut(s) 28, 148, 259, 276, 300, 820, 1401
Tsp45I GTSAC 2 cut(s) 565, 971
TspDTI ATGAA 3 cut(s) 1077, 1269, 1503
TspRI CASTG 2 cut(s) 1399, 1453
Van91I CCANNNNNTGG 1 cut(s) 49
VpaK11BI GGWCC 3 cut(s) 153, 532, 1362
XagI CCTNNNNNAGG 2 cut(s) 74, 735
XapI RAATTY 2 cut(s) 894, 991
XceI RCATGY 1 cut(s) 1337
XmiI GTMKAC 3 cut(s) 233, 1437, 1527
XmnI GAANNNNTTC 1 cut(s) 1081
XspI CTAG 3 cut(s) 542, 1005, 1014
ZrmI AGTACT 1 cut(s) 1423
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.