RLG00000007379

serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0000660
Physical Location & Seq
Reverse (-)
16313823 .. 16318961
5139 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007379

Sequence Viewer

Length: 1824 bp
ATGGATGATACACCACCAGCAGAGGAGCTTCTGAAGAAGCTTCAAGTGCTGGAAGAGGGTCACGCCTACCTCAAGCAAGAGCTCTCGGAGTATTCCTATGCCGAACTGGAGAACCAAAAGGCTCTCTCAAAAAGGCGCTTAAGATTCTCTTCCAAAAGAAGAGTCGGTGGTGGTGGCGGCAGCGGTGGTGGCGGTGCAAGTTGGCGGCCGCCGAGTCTCAACTTCAGTGACAGGCAGTATCTCAACATATTGCAGTCAATAGGGCAGTCTGTTTACATATTTGATCTCAGTTGTCGTATAATTTACTGGAGCAAGACTGCTGGAAATCTATATGGTTATTCTGTGGCAGAGGCCCTTGGACAGAATCCCCTTGATATAGTTCAACATCTCACCAAGGAGGAGAGCTGGACCGGGCAGTTCCCTGTCAAGAACAAAATGGGGGAAATTTTTTCAGCCATGGCCACCAATACTCCATTTTATGATGATGATGGCACTTTCATTGGGGTTGTATGTGTTTCATGGGATTTGCGGCATTTTCAAGAAACGAGGGTTCCACTGTTATGTTTGGAACCAGACTCAAGCCTCGGCCGTTGCCCTACCACTAGTGTGGCAACTCAAGTTGGTGTTGATCCTCAGCAACCTCTGCAAAATGAACTTGCATCAAGAATAACAAATTTGGCATCCAAGGTCAGCAACAAATTCAAGTCAAGAGTTAAGGATGGAAAAGAAAACTTGGATGACAAAGCTGGGAGTGGAGATAGTCGCTGGTGTGATCATGGTTCAGTTTCTCATCTCTCTGACCATTTGGAGGATGGATGTTCAAGTGGGGCAAGCACACCGAGAGGAGATATACGTCCATCTCCTTTTGGTATGTTTGCCAAAATTAAAGACAAGTTTCCAGGTAAACCCTCTGGAGAATATGATGATCAGAGTGAAGCAAAACGCCCTATGCATAAGATAATAACCTCAAAGGCAGAAGCATGGATTGGTAAGAAGGGACTATCATGGCCATGGAAAGAAAATGAGAAAGAAGGGTCGGTGACTAGGAGCACTCATTTTGATGTTGCTGTTAAGGTATTCTTCAAGCAAGAATATCCAGGTGATGTGCTTCTTTCTTTTAGACAAGAGGTATCTCTTATGAAAAGGCTTCGACATCCAAACGTGCTGCTTTTCATGGGAGCGGTGACTTCACCTCAGCGTCTCTGCATTGCAACAGAGTTCCTCCCACGTGGAAGTTTGTTTCAATTACTACAGAAGAACCAGTCAAAACTAGACTGGAGACGACGTGTTCAAATGGCTTTAGATATAGCACGAGGCATGAATTATCTTCATCATTTCAGCCCCCCTATTATTCATCGAGATCTGAAGTCTTCAAATCTCCTAGTTGATAAGAACTGGACTGTCAAGGTTGGTGACTTTGGTCTTTCACGTCTTAAGCATGAAACATTTCTCTATACCAAGACCGGAAAGGGGACGCCTCAATGGATGGCACCAGAAGTTCTGTGTAATGAATCCTCAGATGAGAAGTCTGATGTATACAGCTACGGGGTGATATTGTGGGAGCTCGCTACTGAGAAGATTCCTTGGGATGATCTGAATGCAATGCAGACCGTGTCTTTTGTTATCCAAAAAGAAGAAGACTGTATTTTTATGGGAAGAAATGAACTGAGTTCTTCGCAAGATCCAGCTTGCCGGCCAACATTTCATGAATTGCTGGAAGAACTTAAAGCGTTACAGAGACGGCGTGCTCTCCAGTTCAAAGCAGCGCGTTCTGCCTCTAGTGATAGCACCCAAAACGAATTGCAGACCAGCCTGAAAGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PAS PAS_9 Pkinase_Tyr

Protein Analysis

608

Amino Acids

68.4

Weight (kDa)

8.17

Isoelectric Point (pI)

51.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAS_9 PF13426 92 - 175 4.3e-06 PAS domain
PK_Tyr_Ser-Thr PF07714 349 - 574 1.7e-51 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 349 - 578 4.3e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1489
AccBSI CCGCTC 1 cut(s) 1181
AccI GTMKAC 1 cut(s) 1536
AccII CGCG 1 cut(s) 1768
AciI CCGC 7 cut(s) 177, 183, 192, 205, 209, 529, 1181
AclWI GGATC 2 cut(s) 623, 1676
AcoI YGGCCR 5 cut(s) 206, 459, 586, 1007, 1694
AcsI RAATTY 3 cut(s) 444, 673, 698
AcuI CTGAAG 3 cut(s) 53, 208, 1385
AcvI CACGTG 1 cut(s) 1229
AcyI GRCGYC 1 cut(s) 1475
AfiI CCNNNNNNNGG 2 cut(s) 808, 1470
AflII CTTAAG 2 cut(s) 139, 1433
AflIII ACRYGT 1 cut(s) 1285
AhlI ACTAGT 1 cut(s) 602
AjiI CACGTC 2 cut(s) 1286, 1430
AjnI CCWGG 2 cut(s) 898, 1096
AjuI GAANNNNNNNTTGG 2 cut(s) 969, 1001
AleI CACNNNNGTG 1 cut(s) 605
AluBI AGCT 8 cut(s) 28, 40, 82, 405, 746, 1542, 1564, 1688
AluI AGCT 8 cut(s) 28, 40, 82, 405, 746, 1542, 1564, 1688
Alw21I GWGCWC 4 cut(s) 84, 1052, 1566, 1750
Alw26I GTCTC 4 cut(s) 221, 1205, 1273, 1732
AlwI GGATC 2 cut(s) 623, 1676
AoxI GGCC 6 cut(s) 206, 351, 459, 586, 1007, 1694
ApeKI GCWGC 3 cut(s) 180, 1165, 1763
ApoI RAATTY 3 cut(s) 444, 673, 698
ArsI GACNNNNNNTTYG 2 cut(s) 147, 179
Asp700I GAANNNNTTC 1 cut(s) 1446
AspLEI GCGC 2 cut(s) 138, 1768
AspS9I GGNCC 2 cut(s) 352, 408
AsuC2I CCSGG 1 cut(s) 412
AsuHPI GGTGA 7 cut(s) 382, 1051, 1112, 1182, 1195, 1424, 1561
AvaII GGWCC 1 cut(s) 408
BalI TGGCCA 2 cut(s) 461, 1009
BanI GGYRCC 1 cut(s) 1489
BanII GRGCYC 2 cut(s) 84, 1566
BauI CACGAG 1 cut(s) 1311
BbrPI CACGTG 1 cut(s) 1229
BbsI GAAGAC 2 cut(s) 1362, 1644
Bbv12I GWGCWC 4 cut(s) 84, 1052, 1566, 1750
BbvCI CCTCAGC 2 cut(s) 633, 1194
BbvI GCAGC 3 cut(s) 192, 1152, 1775
BccI CCATC 5 cut(s) 482, 713, 806, 865, 1480
BceAI ACGGC 2 cut(s) 573, 1757
BciT130I CCWGG 2 cut(s) 900, 1098
BclI TGATCA 2 cut(s) 772, 925
BcnI CCSGG 1 cut(s) 412
BcoDI GTCTC 4 cut(s) 221, 1205, 1273, 1732
BcuI ACTAGT 1 cut(s) 602
BfaI CTAG 5 cut(s) 603, 1044, 1271, 1382, 1779
BfmI CTRYAG 1 cut(s) 1250
BfoI RGCGCY 1 cut(s) 139
BfrI CTTAAG 2 cut(s) 139, 1433
BglII AGATCT 1 cut(s) 1360
BisI GCNGC 7 cut(s) 178, 181, 206, 209, 530, 1166, 1764
BlsI GCNGC 7 cut(s) 179, 182, 207, 210, 531, 1167, 1765
Bme1390I CCNGG 3 cut(s) 412, 900, 1098
Bme18I GGWCC 1 cut(s) 408
BmgBI CACGTC 2 cut(s) 1286, 1430
BmgT120I GGNCC 2 cut(s) 352, 408
BmiI GGNNCC 3 cut(s) 552, 570, 1491
BmrFI CCNGG 3 cut(s) 412, 900, 1098
BmsI GCATC 2 cut(s) 668, 689
BoxI GACNNNNGTC 1 cut(s) 1419
BpiI GAAGAC 2 cut(s) 1362, 1644
BpmI CTGGAG 5 cut(s) 128, 328, 933, 1297, 1736
Bpu10I CCTNAGC 2 cut(s) 633, 1194
BpuEI CTTGAG 3 cut(s) 56, 562, 600
BpuMI CCSGG 1 cut(s) 412
BsaAI YACGTR 1 cut(s) 1229
BsaHI GRCGYC 1 cut(s) 1475
BsaJI CCNNGG 7 cut(s) 355, 393, 456, 583, 684, 1010, 1583
BsaWI WCCGGW 1 cut(s) 1463
BsaXI ACNNNNNCTCC 4 cut(s) 454, 484, 1270, 1300
Bsc4I CCNNNNNNNGG 2 cut(s) 808, 1470
Bse118I RCCGGY 1 cut(s) 1692
Bse1I ACTGG 6 cut(s) 111, 311, 1261, 1280, 1400, 1753
Bse3DI GCAATG 2 cut(s) 1206, 1608
BseBI CCWGG 2 cut(s) 900, 1098
BseDI CCNNGG 7 cut(s) 355, 393, 456, 583, 684, 1010, 1583
BseGI GGATG 9 cut(s) 10, 680, 724, 742, 817, 821, 1153, 1491, 1594
BseLI CCNNNNNNNGG 2 cut(s) 808, 1470
BseMI GCAATG 2 cut(s) 1206, 1608
BseMII CTCAG 6 cut(s) 301, 647, 1208, 1530, 1563, 1658
BseNI ACTGG 6 cut(s) 111, 311, 1261, 1280, 1400, 1753
BseRI GAGGAG 3 cut(s) 38, 413, 858
BseX3I CGGCCG 2 cut(s) 206, 586
BseXI GCAGC 3 cut(s) 192, 1152, 1775
BseYI CCCAGC 1 cut(s) 746
Bsh1236I CGCG 1 cut(s) 1768
Bsh1285I CGRYCG 2 cut(s) 209, 589
BshFI GGCC 6 cut(s) 208, 353, 461, 588, 1009, 1696
BshNI GGYRCC 1 cut(s) 1489
BsiEI CGRYCG 2 cut(s) 209, 589
BsiHKAI GWGCWC 4 cut(s) 84, 1052, 1566, 1750
BsiSI CCGG 3 cut(s) 411, 1464, 1693
BslFI GGGAC 2 cut(s) 1011, 1486
BslI CCNNNNNNNGG 2 cut(s) 808, 1470
BsmAI GTCTC 4 cut(s) 221, 1205, 1273, 1732
BsmBI CGTCTC 3 cut(s) 1205, 1273, 1732
BsmFI GGGAC 2 cut(s) 1011, 1486
BsmI GAATGC 1 cut(s) 1603
BsnI GGCC 6 cut(s) 208, 353, 461, 588, 1009, 1696
Bsp1286I GDGCHC 4 cut(s) 84, 1052, 1566, 1750
Bsp143I GATC 7 cut(s) 283, 628, 772, 925, 1360, 1591, 1681
Bsp19I CCATGG 2 cut(s) 456, 1010
BspACI CCGC 7 cut(s) 177, 183, 192, 205, 209, 529, 1181
BspANI GGCC 6 cut(s) 208, 353, 461, 588, 1009, 1696
BspCNI CTCAG 6 cut(s) 300, 646, 1207, 1529, 1564, 1659
BspFNI CGCG 1 cut(s) 1768
BspHI TCATGA 1 cut(s) 1705
BspLI GGNNCC 3 cut(s) 552, 570, 1491
BspPI GGATC 2 cut(s) 623, 1676
BspT107I GGYRCC 1 cut(s) 1489
BspTI CTTAAG 2 cut(s) 139, 1433
BsrBI CCGCTC 1 cut(s) 1181
BsrDI GCAATG 2 cut(s) 1206, 1608
BsrFI RCCGGY 1 cut(s) 1692
BsrI ACTGG 6 cut(s) 111, 311, 1261, 1280, 1400, 1753
BssAI RCCGGY 1 cut(s) 1692
BssECI CCNNGG 7 cut(s) 355, 393, 456, 583, 684, 1010, 1583
BssMI GATC 7 cut(s) 283, 628, 772, 925, 1360, 1591, 1681
BssNAI GTATAC 1 cut(s) 1537
BssNI GRCGYC 1 cut(s) 1475
BssSI CACGAG 1 cut(s) 1311
BssT1I CCWWGG 6 cut(s) 355, 393, 456, 684, 1010, 1583
Bst1107I GTATAC 1 cut(s) 1537
Bst2BI CACGAG 1 cut(s) 1311
Bst2UI CCWGG 2 cut(s) 900, 1098
Bst4CI ACNGT 4 cut(s) 558, 1402, 1612, 1643
Bst6I CTCTTC 3 cut(s) 48, 154, 154
BstACI GRCGYC 1 cut(s) 1475
BstAFI CTTAAG 2 cut(s) 139, 1433
BstAPI GCANNNNNTGC 1 cut(s) 643
BstBAI YACGTR 1 cut(s) 1229
BstC8I GCNNGC 5 cut(s) 832, 1566, 1690, 1694, 1746
BstDEI CTNAG 6 cut(s) 287, 633, 1194, 1516, 1572, 1667
BstDSI CCRYGG 2 cut(s) 456, 1010
BstF5I GGATG 9 cut(s) 10, 680, 724, 742, 817, 821, 1153, 1491, 1594
BstFNI CGCG 1 cut(s) 1768
BstH2I RGCGCY 1 cut(s) 139
BstHHI GCGC 2 cut(s) 138, 1768
BstKTI GATC 7 cut(s) 286, 631, 775, 928, 1363, 1594, 1684
BstMAI GTCTC 4 cut(s) 221, 1205, 1273, 1732
BstMBI GATC 7 cut(s) 283, 628, 772, 925, 1360, 1591, 1681
BstMCI CGRYCG 2 cut(s) 209, 589
BstMWI GCNNNNNNNGC 4 cut(s) 46, 189, 643, 1772
BstNI CCWGG 2 cut(s) 900, 1098
BstPAI GACNNNNGTC 1 cut(s) 1419
BstSCI CCNGG 3 cut(s) 410, 898, 1096
BstSFI CTRYAG 1 cut(s) 1250
BstUI CGCG 1 cut(s) 1768
BstV1I GCAGC 3 cut(s) 192, 1152, 1775
BstV2I GAAGAC 2 cut(s) 1362, 1644
BstX2I RGATCY 2 cut(s) 1360, 1681
BstXI CCANNNNNNTGG 1 cut(s) 607
BstYI RGATCY 2 cut(s) 1360, 1681
BstZ17I GTATAC 1 cut(s) 1537
BstZI CGGCCG 2 cut(s) 206, 586
BsuRI GGCC 6 cut(s) 208, 353, 461, 588, 1009, 1696
BtgI CCRYGG 2 cut(s) 456, 1010
BtrI CACGTC 2 cut(s) 1286, 1430
BtsCI GGATG 9 cut(s) 10, 680, 724, 742, 817, 821, 1153, 1491, 1594
BtsIMutI CAGTG 2 cut(s) 232, 554
Cac8I GCNNGC 5 cut(s) 832, 1566, 1690, 1694, 1746
CciI TCATGA 1 cut(s) 1705
CciNI GCGGCCGC 1 cut(s) 206
CfoI GCGC 2 cut(s) 138, 1768
Cfr10I RCCGGY 1 cut(s) 1692
Cfr13I GGNCC 2 cut(s) 352, 408
CseI GACGC 2 cut(s) 1187, 1483
DdeI CTNAG 6 cut(s) 287, 633, 1194, 1516, 1572, 1667
DpnI GATC 7 cut(s) 285, 630, 774, 927, 1362, 1593, 1683
DpnII GATC 7 cut(s) 283, 628, 772, 925, 1360, 1591, 1681
EaeI YGGCCR 5 cut(s) 206, 459, 586, 1007, 1694
EagI CGGCCG 2 cut(s) 206, 586
Eam1104I CTCTTC 3 cut(s) 48, 154, 154
EarI CTCTTC 3 cut(s) 48, 154, 154
Ecl136II GAGCTC 2 cut(s) 82, 1564
EclXI CGGCCG 2 cut(s) 206, 586
Eco130I CCWWGG 6 cut(s) 355, 393, 456, 684, 1010, 1583
Eco24I GRGCYC 2 cut(s) 84, 1566
Eco47I GGWCC 1 cut(s) 408
Eco52I CGGCCG 2 cut(s) 206, 586
Eco53kI GAGCTC 2 cut(s) 82, 1564
Eco57I CTGAAG 3 cut(s) 53, 208, 1385
Eco72I CACGTG 1 cut(s) 1229
EcoICRI GAGCTC 2 cut(s) 82, 1564
EcoO109I RGGNCCY 1 cut(s) 352
EcoRII CCWGG 2 cut(s) 898, 1096
EcoT14I CCWWGG 6 cut(s) 355, 393, 456, 684, 1010, 1583
EcoT22I ATGCAT 1 cut(s) 954
EcoT38I GRGCYC 2 cut(s) 84, 1566
ErhI CCWWGG 6 cut(s) 355, 393, 456, 684, 1010, 1583
Esp3I CGTCTC 3 cut(s) 1205, 1273, 1732
FalI AAGNNNNNCTT 4 cut(s) 133, 165, 1064, 1096
FaqI GGGAC 2 cut(s) 1011, 1486
FbaI TGATCA 2 cut(s) 772, 925
FblI GTMKAC 1 cut(s) 1536
Fnu4HI GCNGC 7 cut(s) 178, 181, 206, 209, 530, 1166, 1764
FokI GGATG 9 cut(s) 17, 667, 731, 749, 824, 828, 1140, 1498, 1601
FriOI GRGCYC 2 cut(s) 84, 1566
Fsp4HI GCNGC 7 cut(s) 178, 181, 206, 209, 530, 1166, 1764
FspBI CTAG 5 cut(s) 603, 1044, 1271, 1382, 1779
GlaI GCGC 2 cut(s) 137, 1767
GluI GCNGC 7 cut(s) 178, 181, 206, 209, 530, 1166, 1764
GsaI CCCAGC 1 cut(s) 750
GsuI CTGGAG 5 cut(s) 128, 328, 933, 1297, 1736
HaeII RGCGCY 1 cut(s) 139
HaeIII GGCC 6 cut(s) 208, 353, 461, 588, 1009, 1696
HapII CCGG 3 cut(s) 411, 1464, 1693
HgaI GACGC 2 cut(s) 1187, 1483
HhaI GCGC 2 cut(s) 138, 1768
Hin1I GRCGYC 1 cut(s) 1475
Hin6I GCGC 2 cut(s) 136, 1766
HinP1I GCGC 2 cut(s) 136, 1766
HindIII AAGCTT 1 cut(s) 38
HinfI GANTC 7 cut(s) 144, 162, 214, 364, 575, 1511, 1579
HpaII CCGG 3 cut(s) 411, 1464, 1693
HphI GGTGA 7 cut(s) 382, 1051, 1112, 1182, 1195, 1424, 1561
Hpy166II GTNNAC 3 cut(s) 274, 905, 1537
Hpy188I TCNGA 8 cut(s) 33, 88, 799, 930, 1365, 1519, 1531, 1596
Hpy188III TCNNGA 7 cut(s) 427, 539, 663, 708, 912, 1358, 1706
Hpy8I GTNNAC 3 cut(s) 274, 905, 1537
Hpy99I CGWCG 1 cut(s) 1287
HpyAV CCTTC 2 cut(s) 988, 1025
HpyCH4III ACNGT 4 cut(s) 558, 1402, 1612, 1643
HpyCH4IV ACGT 5 cut(s) 853, 1161, 1228, 1285, 1429
HpyF10VI GCNNNNNNNGC 4 cut(s) 46, 189, 643, 1772
HpyF3I CTNAG 6 cut(s) 287, 633, 1194, 1516, 1572, 1667
HpySE526I ACGT 5 cut(s) 853, 1161, 1228, 1285, 1429
Hsp92I GRCGYC 1 cut(s) 1475
HspAI GCGC 2 cut(s) 136, 1766
KroI GCCGGC 1 cut(s) 1692
KroNI GCCGGC 1 cut(s) 1694
Ksp22I TGATCA 2 cut(s) 772, 925
Kzo9I GATC 7 cut(s) 283, 628, 772, 925, 1360, 1591, 1681
LmnI GCTCC 5 cut(s) 25, 309, 1047, 1178, 1561
Lsp1109I GCAGC 3 cut(s) 192, 1152, 1775
LweI GCATC 2 cut(s) 668, 689
MaeI CTAG 5 cut(s) 603, 1044, 1271, 1382, 1779
MaeII ACGT 5 cut(s) 853, 1161, 1228, 1285, 1429
MaeIII GTNAC 6 cut(s) 59, 227, 1039, 1183, 1412, 1731
MalI GATC 7 cut(s) 285, 630, 774, 927, 1362, 1593, 1683
MbiI CCGCTC 1 cut(s) 1181
MboI GATC 7 cut(s) 283, 628, 772, 925, 1360, 1591, 1681
MflI RGATCY 2 cut(s) 1360, 1681
MhlI GDGCHC 4 cut(s) 84, 1052, 1566, 1750
MlsI TGGCCA 2 cut(s) 461, 1009
MluCI AATT 9 cut(s) 300, 444, 673, 698, 882, 1244, 1321, 1709, 1799
MluNI TGGCCA 2 cut(s) 461, 1009
MlyI GAGTC 3 cut(s) 171, 223, 569
Mox20I TGGCCA 2 cut(s) 461, 1009
Mph1103I ATGCAT 1 cut(s) 954
MroNI GCCGGC 1 cut(s) 1692
MroXI GAANNNNTTC 1 cut(s) 1446
MscI TGGCCA 2 cut(s) 461, 1009
MseI TTAA 6 cut(s) 140, 714, 885, 1071, 1434, 1725
MslI CAYNNNNRTG 4 cut(s) 559, 605, 1009, 1059
Msp20I TGGCCA 2 cut(s) 461, 1009
MspA1I CMGCKG 1 cut(s) 183
MspCI CTTAAG 2 cut(s) 139, 1433
MspI CCGG 3 cut(s) 411, 1464, 1693
MspR9I CCNGG 3 cut(s) 412, 900, 1098
Mva1269I GAATGC 1 cut(s) 1603
MvaI CCWGG 2 cut(s) 900, 1098
MvnI CGCG 1 cut(s) 1768
MwoI GCNNNNNNNGC 4 cut(s) 46, 189, 643, 1772
NaeI GCCGGC 1 cut(s) 1694
NciI CCSGG 1 cut(s) 412
NcoI CCATGG 2 cut(s) 456, 1010
NdeII GATC 7 cut(s) 283, 628, 772, 925, 1360, 1591, 1681
NgoMIV GCCGGC 1 cut(s) 1692
NlaIV GGNNCC 3 cut(s) 552, 570, 1491
NmeAIII GCCGAG 2 cut(s) 237, 564
NmuCI GTSAC 5 cut(s) 59, 227, 1039, 1183, 1412
NotI GCGGCCGC 1 cut(s) 206
NsiI ATGCAT 1 cut(s) 954
OliI CACNNNNGTG 1 cut(s) 605
PagI TCATGA 1 cut(s) 1705
PctI GAATGC 1 cut(s) 1603
PdiI GCCGGC 1 cut(s) 1694
PdmI GAANNNNTTC 1 cut(s) 1446
PfeI GAWTC 4 cut(s) 144, 364, 1511, 1579
PflFI GACNNNGTC 1 cut(s) 1612
PkrI GCNGC 7 cut(s) 179, 182, 207, 210, 531, 1167, 1765
PleI GAGTC 3 cut(s) 170, 222, 569
PmaCI CACGTG 1 cut(s) 1229
PmlI CACGTG 1 cut(s) 1229
PpsI GAGTC 3 cut(s) 170, 222, 569
Ppu21I YACGTR 1 cut(s) 1229
PshAI GACNNNNGTC 1 cut(s) 1419
Psp124BI GAGCTC 2 cut(s) 84, 1566
Psp6I CCWGG 2 cut(s) 898, 1096
PspCI CACGTG 1 cut(s) 1229
PspFI CCCAGC 1 cut(s) 746
PspGI CCWGG 2 cut(s) 898, 1096
PspN4I GGNNCC 3 cut(s) 552, 570, 1491
PspPI GGNCC 2 cut(s) 352, 408
PsuI RGATCY 2 cut(s) 1360, 1681
PsyI GACNNNGTC 1 cut(s) 1612
RseI CAYNNNNRTG 4 cut(s) 559, 605, 1009, 1059
SacI GAGCTC 2 cut(s) 84, 1566
SaqAI TTAA 6 cut(s) 140, 714, 885, 1071, 1434, 1725
SatI GCNGC 7 cut(s) 178, 181, 206, 209, 530, 1166, 1764
Sau3AI GATC 7 cut(s) 283, 628, 772, 925, 1360, 1591, 1681
Sau96I GGNCC 2 cut(s) 352, 408
SchI GAGTC 3 cut(s) 171, 223, 569
ScrFI CCNGG 3 cut(s) 412, 900, 1098
SduI GDGCHC 4 cut(s) 84, 1052, 1566, 1750
SfaNI GCATC 2 cut(s) 668, 689
SfcI CTRYAG 1 cut(s) 1250
SinI GGWCC 1 cut(s) 408
SmiMI CAYNNNNRTG 4 cut(s) 559, 605, 1009, 1059
SmlI CTYRAG 5 cut(s) 71, 139, 577, 615, 1433
SmoI CTYRAG 5 cut(s) 71, 139, 577, 615, 1433
SpeI ACTAGT 1 cut(s) 602
Sse9I AATT 9 cut(s) 300, 444, 673, 698, 882, 1244, 1321, 1709, 1799
SsiI CCGC 7 cut(s) 177, 183, 192, 205, 209, 529, 1181
SspMI CTAG 5 cut(s) 603, 1044, 1271, 1382, 1779
SstI GAGCTC 2 cut(s) 84, 1566
StyD4I CCNGG 3 cut(s) 410, 898, 1096
StyI CCWWGG 6 cut(s) 355, 393, 456, 684, 1010, 1583
TaaI ACNGT 4 cut(s) 558, 1402, 1612, 1643
TaiI ACGT 5 cut(s) 856, 1164, 1231, 1288, 1432
TaqI TCGA 2 cut(s) 1150, 1357
TasI AATT 9 cut(s) 300, 444, 673, 698, 882, 1244, 1321, 1709, 1799
TauI GCSGC 4 cut(s) 180, 208, 211, 532
TfiI GAWTC 4 cut(s) 144, 364, 1511, 1579
Tru1I TTAA 6 cut(s) 140, 714, 885, 1071, 1434, 1725
Tru9I TTAA 6 cut(s) 140, 714, 885, 1071, 1434, 1725
TscAI CASTG 2 cut(s) 232, 561
TseFI GTSAC 5 cut(s) 59, 227, 1039, 1183, 1412
TseI GCWGC 3 cut(s) 180, 1165, 1763
Tsp45I GTSAC 5 cut(s) 59, 227, 1039, 1183, 1412
TspRI CASTG 2 cut(s) 232, 561
Tth111I GACNNNGTC 1 cut(s) 1612
Vha464I CTTAAG 2 cut(s) 139, 1433
VpaK11BI GGWCC 1 cut(s) 408
XapI RAATTY 3 cut(s) 444, 673, 698
XcmI CCANNNNNNNNNTGG 1 cut(s) 809
XmiI GTMKAC 1 cut(s) 1536
XmnI GAANNNNTTC 1 cut(s) 1446
XspI CTAG 5 cut(s) 603, 1044, 1271, 1382, 1779
Zsp2I ATGCAT 1 cut(s) 954
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.