Belongs to the argonaute family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Gly-rich_Ago1 | PF12764 | 152 - 245 | 6.6e-19 | Glycine-rich region of argonaut |
| ArgoN | PF16486 | 265 - 400 | 5.2e-38 | N-terminal domain of argonaute |
| ArgoL1 | PF08699 | 410 - 460 | 1.4e-21 | Argonaute linker 1 domain |
| PAZ | PF02170 | 466 - 592 | 3.2e-30 | PAZ domain |
| ArgoL2 | PF16488 | 602 - 648 | 6.5e-18 | Argonaute linker 2 domain |
| ArgoMid | PF16487 | 659 - 734 | 1.4e-09 | Mid domain of argonaute |
| Piwi | PF02171 | 751 - 1070 | 8.7e-116 | Piwi domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1520 |
| Acc36I | ACCTGC | 3 cut(s) | 298, 673, 1128 |
| Acc65I | GGTACC | 1 cut(s) | 2957 |
| AccB1I | GGYRCC | 1 cut(s) | 2957 |
| AccI | GTMKAC | 1 cut(s) | 986 |
| AccII | CGCG | 2 cut(s) | 1111, 3176 |
| AccIII | TCCGGA | 1 cut(s) | 138 |
| AclI | AACGTT | 1 cut(s) | 2388 |
| AclWI | GGATC | 8 cut(s) | 355, 400, 849, 1850, 2048, 2312, 2651, 2664 |
| AcoI | YGGCCR | 1 cut(s) | 430 |
| AcsI | RAATTY | 3 cut(s) | 1100, 1678, 3024 |
| AcuI | CTGAAG | 4 cut(s) | 516, 662, 1163, 1872 |
| AdeI | CACNNNGTG | 2 cut(s) | 795, 890 |
| AflIII | ACRYGT | 2 cut(s) | 191, 3123 |
| AgeI | ACCGGT | 1 cut(s) | 733 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1833 |
| AjiI | CACGTC | 1 cut(s) | 194 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 232, 264 |
| Alw21I | GWGCWC | 5 cut(s) | 2608, 3140, 3253, 3299, 3307 |
| Alw26I | GTCTC | 9 cut(s) | 69, 136, 266, 742, 1139, 1741, 1753, 2306, 3212 |
| Alw44I | GTGCAC | 1 cut(s) | 3136 |
| AlwI | GGATC | 8 cut(s) | 355, 400, 849, 1850, 2048, 2312, 2651, 2664 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1186, 1224, 1414 |
| Aor13HI | TCCGGA | 1 cut(s) | 138 |
| ApaLI | GTGCAC | 1 cut(s) | 3136 |
| ApoI | RAATTY | 3 cut(s) | 1100, 1678, 3024 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 27 |
| AsiGI | ACCGGT | 1 cut(s) | 733 |
| Asp718I | GGTACC | 1 cut(s) | 2957 |
| AspLEI | GCGC | 6 cut(s) | 1111, 1521, 1797, 2742, 3094, 3178 |
| AspS9I | GGNCC | 7 cut(s) | 149, 476, 527, 542, 995, 1174, 3311 |
| AsuC2I | CCSGG | 3 cut(s) | 2520, 3164, 3309 |
| AsuHPI | GGTGA | 6 cut(s) | 238, 598, 1795, 2303, 2975, 3097 |
| AvaII | GGWCC | 2 cut(s) | 527, 3311 |
| BaeGI | GKGCMC | 2 cut(s) | 357, 3140 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 499, 532, 2949, 2982 |
| BamHI | GGATCC | 1 cut(s) | 2656 |
| BanI | GGYRCC | 1 cut(s) | 2957 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 379, 411 |
| BauI | CACGAG | 1 cut(s) | 3300 |
| BbsI | GAAGAC | 2 cut(s) | 1273, 1658 |
| Bbv12I | GWGCWC | 5 cut(s) | 2608, 3140, 3253, 3299, 3307 |
| BbvCI | CCTCAGC | 3 cut(s) | 483, 612, 2736 |
| BccI | CCATC | 9 cut(s) | 227, 553, 698, 948, 962, 2545, 2622, 2753, 2919 |
| BceAI | ACGGC | 2 cut(s) | 112, 417 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2789, 2823 |
| BciVI | GTATCC | 1 cut(s) | 2341 |
| BclI | TGATCA | 2 cut(s) | 1095, 2176 |
| BcnI | CCSGG | 3 cut(s) | 2520, 3164, 3309 |
| BcoDI | GTCTC | 9 cut(s) | 69, 136, 266, 742, 1139, 1741, 1753, 2306, 3212 |
| BfaI | CTAG | 5 cut(s) | 68, 711, 741, 2327, 3379 |
| BfmI | CTRYAG | 3 cut(s) | 2752, 3010, 3095 |
| BfoI | RGCGCY | 1 cut(s) | 1798 |
| BfuAI | ACCTGC | 3 cut(s) | 298, 673, 1128 |
| BfuI | GTATCC | 1 cut(s) | 2341 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 438 |
| BglII | AGATCT | 1 cut(s) | 2317 |
| BmcAI | AGTACT | 1 cut(s) | 2433 |
| Bme18I | GGWCC | 2 cut(s) | 527, 3311 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1833 |
| BmgBI | CACGTC | 1 cut(s) | 194 |
| BmgT120I | GGNCC | 7 cut(s) | 149, 476, 527, 542, 995, 1174, 3311 |
| BmiI | GGNNCC | 7 cut(s) | 280, 758, 2658, 2838, 2959, 3213, 3312 |
| BmrI | ACTGGG | 2 cut(s) | 578, 2329 |
| BmsI | GCATC | 7 cut(s) | 173, 1150, 1542, 2203, 2431, 2797, 3079 |
| BmuI | ACTGGG | 2 cut(s) | 578, 2329 |
| BpiI | GAAGAC | 2 cut(s) | 1273, 1658 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 745, 777 |
| BpmI | CTGGAG | 1 cut(s) | 2855 |
| Bpu10I | CCTNAGC | 5 cut(s) | 483, 612, 1902, 2142, 2736 |
| BpuEI | CTTGAG | 5 cut(s) | 1763, 1785, 2434, 2547, 2592 |
| BpuMI | CCSGG | 3 cut(s) | 2520, 3164, 3309 |
| BsaAI | YACGTR | 2 cut(s) | 1481, 3126 |
| BsaBI | GATNNNNATC | 2 cut(s) | 54, 1452 |
| BsaI | GGTCTC | 2 cut(s) | 742, 1139 |
| BsaWI | WCCGGW | 2 cut(s) | 138, 733 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 920, 950, 1476, 1506, 2013, 2043 |
| Bse118I | RCCGGY | 3 cut(s) | 151, 733, 785 |
| Bse3DI | GCAATG | 3 cut(s) | 1382, 2068, 2223 |
| Bse8I | GATNNNNATC | 2 cut(s) | 54, 1452 |
| BseAI | TCCGGA | 1 cut(s) | 138 |
| BseGI | GGATG | 9 cut(s) | 545, 690, 1045, 1547, 1648, 2509, 2515, 2764, 3073 |
| BseJI | GATNNNNATC | 2 cut(s) | 54, 1452 |
| BseMI | GCAATG | 3 cut(s) | 1382, 2068, 2223 |
| BseRI | GAGGAG | 5 cut(s) | 250, 351, 471, 516, 1061 |
| BseSI | GKGCMC | 2 cut(s) | 357, 3140 |
| BseX3I | CGGCCG | 1 cut(s) | 430 |
| BseYI | CCCAGC | 4 cut(s) | 282, 992, 1407, 3043 |
| BsgI | GTGCAG | 3 cut(s) | 554, 1106, 3324 |
| Bsh1236I | CGCG | 2 cut(s) | 1111, 3176 |
| Bsh1285I | CGRYCG | 2 cut(s) | 433, 1456 |
| BshNI | GGYRCC | 1 cut(s) | 2957 |
| BshTI | ACCGGT | 1 cut(s) | 733 |
| BsiEI | CGRYCG | 2 cut(s) | 433, 1456 |
| BsiHKAI | GWGCWC | 5 cut(s) | 2608, 3140, 3253, 3299, 3307 |
| BsiSI | CCGG | 8 cut(s) | 139, 152, 694, 734, 786, 2519, 3164, 3308 |
| BslFI | GGGAC | 5 cut(s) | 1065, 1743, 2433, 2463, 3085 |
| BsmAI | GTCTC | 9 cut(s) | 69, 136, 266, 742, 1139, 1741, 1753, 2306, 3212 |
| BsmFI | GGGAC | 5 cut(s) | 1065, 1743, 2433, 2463, 3085 |
| BsmI | GAATGC | 1 cut(s) | 1917 |
| Bso31I | GGTCTC | 2 cut(s) | 742, 1139 |
| Bsp1286I | GDGCHC | 6 cut(s) | 357, 2608, 3140, 3253, 3299, 3307 |
| Bsp13I | TCCGGA | 1 cut(s) | 138 |
| Bsp1407I | TGTACA | 2 cut(s) | 797, 2065 |
| Bsp19I | CCATGG | 1 cut(s) | 1931 |
| BspEI | TCCGGA | 1 cut(s) | 138 |
| BspFNI | CGCG | 2 cut(s) | 1111, 3176 |
| BspHI | TCATGA | 2 cut(s) | 1621, 2209 |
| BspLI | GGNNCC | 7 cut(s) | 280, 758, 2658, 2838, 2959, 3213, 3312 |
| BspMAI | CTGCAG | 2 cut(s) | 3014, 3099 |
| BspMI | ACCTGC | 3 cut(s) | 298, 673, 1128 |
| BspPI | GGATC | 8 cut(s) | 355, 400, 849, 1850, 2048, 2312, 2651, 2664 |
| BspT107I | GGYRCC | 1 cut(s) | 2957 |
| BspTNI | GGTCTC | 2 cut(s) | 742, 1139 |
| BsrDI | GCAATG | 3 cut(s) | 1382, 2068, 2223 |
| BsrFI | RCCGGY | 3 cut(s) | 151, 733, 785 |
| BsrGI | TGTACA | 2 cut(s) | 797, 2065 |
| BssAI | RCCGGY | 3 cut(s) | 151, 733, 785 |
| BssNAI | GTATAC | 1 cut(s) | 987 |
| BssSI | CACGAG | 1 cut(s) | 3300 |
| BssT1I | CCWWGG | 4 cut(s) | 379, 1014, 1931, 2463 |
| Bst1107I | GTATAC | 1 cut(s) | 987 |
| Bst2BI | CACGAG | 1 cut(s) | 3300 |
| Bst6I | CTCTTC | 4 cut(s) | 227, 382, 768, 1005 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2390 |
| BstAUI | TGTACA | 2 cut(s) | 797, 2065 |
| BstBAI | YACGTR | 2 cut(s) | 1481, 3126 |
| BstC8I | GCNNGC | 9 cut(s) | 153, 538, 580, 618, 631, 1113, 1915, 1973, 3339 |
| BstDSI | CCRYGG | 4 cut(s) | 179, 433, 1931, 2961 |
| BstF5I | GGATG | 9 cut(s) | 545, 690, 1045, 1547, 1648, 2509, 2515, 2764, 3073 |
| BstFNI | CGCG | 2 cut(s) | 1111, 3176 |
| BstH2I | RGCGCY | 1 cut(s) | 1798 |
| BstHHI | GCGC | 6 cut(s) | 1111, 1521, 1797, 2742, 3094, 3178 |
| BstMAI | GTCTC | 9 cut(s) | 69, 136, 266, 742, 1139, 1741, 1753, 2306, 3212 |
| BstMCI | CGRYCG | 2 cut(s) | 433, 1456 |
| BstNSI | RCATGY | 1 cut(s) | 2357 |
| BstSFI | CTRYAG | 3 cut(s) | 2752, 3010, 3095 |
| BstSLI | GKGCMC | 2 cut(s) | 357, 3140 |
| BstUI | CGCG | 2 cut(s) | 1111, 3176 |
| BstV2I | GAAGAC | 2 cut(s) | 1273, 1658 |
| BstX2I | RGATCY | 8 cut(s) | 347, 392, 841, 1855, 2040, 2304, 2317, 2656 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1952 |
| BstYI | RGATCY | 8 cut(s) | 347, 392, 841, 1855, 2040, 2304, 2317, 2656 |
| BstZ17I | GTATAC | 1 cut(s) | 987 |
| BstZI | CGGCCG | 1 cut(s) | 430 |
| BsuI | GTATCC | 1 cut(s) | 2341 |
| BtgI | CCRYGG | 4 cut(s) | 179, 433, 1931, 2961 |
| BtgZI | GCGATG | 1 cut(s) | 2600 |
| BtrI | CACGTC | 1 cut(s) | 194 |
| BtsCI | GGATG | 9 cut(s) | 545, 690, 1045, 1547, 1648, 2509, 2515, 2764, 3073 |
| BtsI | GCAGTG | 1 cut(s) | 2163 |
| BveI | ACCTGC | 3 cut(s) | 298, 673, 1128 |
| Cac8I | GCNNGC | 9 cut(s) | 153, 538, 580, 618, 631, 1113, 1915, 1973, 3339 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1186, 1224, 1414 |
| CciI | TCATGA | 2 cut(s) | 1621, 2209 |
| CfoI | GCGC | 6 cut(s) | 1111, 1521, 1797, 2742, 3094, 3178 |
| Cfr10I | RCCGGY | 3 cut(s) | 151, 733, 785 |
| Cfr13I | GGNCC | 7 cut(s) | 149, 476, 527, 542, 995, 1174, 3311 |
| CseI | GACGC | 1 cut(s) | 2870 |
| CsiI | ACCWGGT | 2 cut(s) | 2891, 2953 |
| CspAI | ACCGGT | 1 cut(s) | 733 |
| DraI | TTTAAA | 3 cut(s) | 1347, 2298, 2644 |
| DraIII | CACNNNGTG | 2 cut(s) | 795, 890 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1833 |
| EaeI | YGGCCR | 1 cut(s) | 430 |
| EagI | CGGCCG | 1 cut(s) | 430 |
| Eam1104I | CTCTTC | 4 cut(s) | 227, 382, 768, 1005 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1833 |
| EarI | CTCTTC | 4 cut(s) | 227, 382, 768, 1005 |
| EciI | GGCGGA | 3 cut(s) | 270, 288, 1917 |
| EclXI | CGGCCG | 1 cut(s) | 430 |
| Eco130I | CCWWGG | 4 cut(s) | 379, 1014, 1931, 2463 |
| Eco147I | AGGCCT | 3 cut(s) | 1438, 2822, 3331 |
| Eco31I | GGTCTC | 2 cut(s) | 742, 1139 |
| Eco47I | GGWCC | 2 cut(s) | 527, 3311 |
| Eco52I | CGGCCG | 1 cut(s) | 430 |
| Eco57I | CTGAAG | 4 cut(s) | 516, 662, 1163, 1872 |
| EcoO109I | RGGNCCY | 3 cut(s) | 476, 527, 1174 |
| EcoRI | GAATTC | 1 cut(s) | 3024 |
| EcoT14I | CCWWGG | 4 cut(s) | 379, 1014, 1931, 2463 |
| EcoT22I | ATGCAT | 1 cut(s) | 1846 |
| ErhI | CCWWGG | 4 cut(s) | 379, 1014, 1931, 2463 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 622, 654 |
| FaqI | GGGAC | 5 cut(s) | 1065, 1743, 2433, 2463, 3085 |
| FauI | CCCGC | 1 cut(s) | 2066 |
| FauNDI | CATATG | 1 cut(s) | 1846 |
| FbaI | TGATCA | 2 cut(s) | 1095, 2176 |
| FblI | GTMKAC | 1 cut(s) | 986 |
| FokI | GGATG | 9 cut(s) | 532, 677, 1052, 1534, 1635, 2496, 2502, 2771, 3080 |
| FspBI | CTAG | 5 cut(s) | 68, 711, 741, 2327, 3379 |
| FspI | TGCGCA | 1 cut(s) | 1520 |
| GlaI | GCGC | 6 cut(s) | 1110, 1520, 1796, 2741, 3093, 3177 |
| GsaI | CCCAGC | 4 cut(s) | 286, 996, 1411, 3047 |
| GsuI | CTGGAG | 1 cut(s) | 2855 |
| HaeII | RGCGCY | 1 cut(s) | 1798 |
| HapII | CCGG | 8 cut(s) | 139, 152, 694, 734, 786, 2519, 3164, 3308 |
| HgaI | GACGC | 1 cut(s) | 2870 |
| HhaI | GCGC | 6 cut(s) | 1111, 1521, 1797, 2742, 3094, 3178 |
| Hin6I | GCGC | 6 cut(s) | 1109, 1519, 1795, 2740, 3092, 3176 |
| HinP1I | GCGC | 6 cut(s) | 1109, 1519, 1795, 2740, 3092, 3176 |
| HincII | GTYRAC | 1 cut(s) | 2932 |
| HindII | GTYRAC | 1 cut(s) | 2932 |
| HindIII | AAGCTT | 1 cut(s) | 705 |
| HpaII | CCGG | 8 cut(s) | 139, 152, 694, 734, 786, 2519, 3164, 3308 |
| HphI | GGTGA | 6 cut(s) | 238, 598, 1795, 2303, 2975, 3097 |
| Hpy166II | GTNNAC | 7 cut(s) | 798, 895, 987, 2932, 2968, 3081, 3138 |
| Hpy8I | GTNNAC | 7 cut(s) | 798, 895, 987, 2932, 2968, 3081, 3138 |
| Hpy99I | CGWCG | 1 cut(s) | 198 |
| HpyCH4IV | ACGT | 7 cut(s) | 5, 193, 1480, 1834, 2388, 2455, 3125 |
| HpySE526I | ACGT | 7 cut(s) | 5, 193, 1480, 1834, 2388, 2455, 3125 |
| HspAI | GCGC | 6 cut(s) | 1109, 1519, 1795, 2740, 3092, 3176 |
| Kpn2I | TCCGGA | 1 cut(s) | 138 |
| KpnI | GGTACC | 1 cut(s) | 2961 |
| KroI | GCCGGC | 1 cut(s) | 151 |
| KroNI | GCCGGC | 1 cut(s) | 153 |
| Ksp22I | TGATCA | 2 cut(s) | 1095, 2176 |
| LmnI | GCTCC | 7 cut(s) | 301, 1810, 2239, 2623, 2836, 3211, 3294 |
| LweI | GCATC | 7 cut(s) | 173, 1150, 1542, 2203, 2431, 2797, 3079 |
| MabI | ACCWGGT | 2 cut(s) | 2891, 2953 |
| MaeI | CTAG | 5 cut(s) | 68, 711, 741, 2327, 3379 |
| MaeII | ACGT | 7 cut(s) | 5, 193, 1480, 1834, 2388, 2455, 3125 |
| MfeI | CAATTG | 3 cut(s) | 2035, 2541, 3153 |
| MflI | RGATCY | 8 cut(s) | 347, 392, 841, 1855, 2040, 2304, 2317, 2656 |
| MhlI | GDGCHC | 6 cut(s) | 357, 2608, 3140, 3253, 3299, 3307 |
| MlyI | GAGTC | 4 cut(s) | 597, 929, 1098, 2963 |
| MmeI | TCCRAC | 3 cut(s) | 1349, 1654, 1963 |
| Mph1103I | ATGCAT | 1 cut(s) | 1846 |
| MroI | TCCGGA | 1 cut(s) | 138 |
| MroNI | GCCGGC | 1 cut(s) | 151 |
| MslI | CAYNNNNRTG | 5 cut(s) | 221, 224, 852, 1355, 3054 |
| MspA1I | CMGCKG | 2 cut(s) | 536, 2549 |
| MspI | CCGG | 8 cut(s) | 139, 152, 694, 734, 786, 2519, 3164, 3308 |
| MssI | GTTTAAAC | 1 cut(s) | 2644 |
| MunI | CAATTG | 3 cut(s) | 2035, 2541, 3153 |
| Mva1269I | GAATGC | 1 cut(s) | 1917 |
| MvnI | CGCG | 2 cut(s) | 1111, 3176 |
| NaeI | GCCGGC | 1 cut(s) | 153 |
| NciI | CCSGG | 3 cut(s) | 2520, 3164, 3309 |
| NcoI | CCATGG | 1 cut(s) | 1931 |
| NdeI | CATATG | 1 cut(s) | 1846 |
| NgoMIV | GCCGGC | 1 cut(s) | 151 |
| NlaIV | GGNNCC | 7 cut(s) | 280, 758, 2658, 2838, 2959, 3213, 3312 |
| NmeAIII | GCCGAG | 1 cut(s) | 524 |
| NmuCI | GTSAC | 7 cut(s) | 35, 877, 1783, 2114, 2471, 2503, 2981 |
| NsbI | TGCGCA | 1 cut(s) | 1520 |
| NsiI | ATGCAT | 1 cut(s) | 1846 |
| NspI | RCATGY | 1 cut(s) | 2357 |
| PagI | TCATGA | 2 cut(s) | 1621, 2209 |
| PceI | AGGCCT | 3 cut(s) | 1438, 2822, 3331 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3298 |
| PctI | GAATGC | 1 cut(s) | 1917 |
| PdiI | GCCGGC | 1 cut(s) | 153 |
| PfeI | GAWTC | 6 cut(s) | 135, 1417, 1448, 1894, 2227, 2528 |
| PfoI | TCCNGGA | 1 cut(s) | 769 |
| PinAI | ACCGGT | 1 cut(s) | 733 |
| Ple19I | CGATCG | 1 cut(s) | 1456 |
| PleI | GAGTC | 4 cut(s) | 597, 929, 1097, 2963 |
| PmeI | GTTTAAAC | 1 cut(s) | 2644 |
| PpsI | GAGTC | 4 cut(s) | 597, 929, 1097, 2963 |
| Ppu21I | YACGTR | 2 cut(s) | 1481, 3126 |
| PpuMI | RGGWCCY | 1 cut(s) | 527 |
| Psp1406I | AACGTT | 1 cut(s) | 2388 |
| Psp5II | RGGWCCY | 1 cut(s) | 527 |
| PspFI | CCCAGC | 4 cut(s) | 282, 992, 1407, 3043 |
| PspN4I | GGNNCC | 7 cut(s) | 280, 758, 2658, 2838, 2959, 3213, 3312 |
| PspPI | GGNCC | 7 cut(s) | 149, 476, 527, 542, 995, 1174, 3311 |
| PspPPI | RGGWCCY | 1 cut(s) | 527 |
| PstI | CTGCAG | 2 cut(s) | 3014, 3099 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1186, 1224, 1414 |
| PsuI | RGATCY | 8 cut(s) | 347, 392, 841, 1855, 2040, 2304, 2317, 2656 |
| PvuI | CGATCG | 1 cut(s) | 1456 |
| PvuII | CAGCTG | 2 cut(s) | 536, 2549 |
| RseI | CAYNNNNRTG | 5 cut(s) | 221, 224, 852, 1355, 3054 |
| Sau96I | GGNCC | 7 cut(s) | 149, 476, 527, 542, 995, 1174, 3311 |
| ScaI | AGTACT | 1 cut(s) | 2433 |
| SchI | GAGTC | 4 cut(s) | 597, 929, 1098, 2963 |
| SduI | GDGCHC | 6 cut(s) | 357, 2608, 3140, 3253, 3299, 3307 |
| SexAI | ACCWGGT | 2 cut(s) | 2891, 2953 |
| SfaNI | GCATC | 7 cut(s) | 173, 1150, 1542, 2203, 2431, 2797, 3079 |
| SfcI | CTRYAG | 3 cut(s) | 2752, 3010, 3095 |
| SinI | GGWCC | 2 cut(s) | 527, 3311 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 221, 224, 852, 1355, 3054 |
| SmlI | CTYRAG | 5 cut(s) | 1778, 1800, 2449, 2562, 2607 |
| SmoI | CTYRAG | 5 cut(s) | 1778, 1800, 2449, 2562, 2607 |
| SseBI | AGGCCT | 3 cut(s) | 1438, 2822, 3331 |
| SspMI | CTAG | 5 cut(s) | 68, 711, 741, 2327, 3379 |
| StuI | AGGCCT | 3 cut(s) | 1438, 2822, 3331 |
| StyI | CCWWGG | 4 cut(s) | 379, 1014, 1931, 2463 |
| TaiI | ACGT | 7 cut(s) | 8, 196, 1483, 1837, 2391, 2458, 3128 |
| TaqI | TCGA | 3 cut(s) | 1611, 2170, 2997 |
| TatI | WGTACW | 3 cut(s) | 797, 2065, 2431 |
| TauI | GCSGC | 3 cut(s) | 432, 543, 3042 |
| TfiI | GAWTC | 6 cut(s) | 135, 1417, 1448, 1894, 2227, 2528 |
| TseFI | GTSAC | 7 cut(s) | 35, 877, 1783, 2114, 2471, 2503, 2981 |
| Tsp45I | GTSAC | 7 cut(s) | 35, 877, 1783, 2114, 2471, 2503, 2981 |
| TspDTI | ATGAA | 9 cut(s) | 1230, 1363, 1599, 1610, 1613, 1638, 2015, 2112, 3084 |
| TspGWI | ACGGA | 5 cut(s) | 201, 988, 2437, 2702, 3307 |
| VneI | GTGCAC | 1 cut(s) | 3136 |
| VpaK11BI | GGWCC | 2 cut(s) | 527, 3311 |
| XapI | RAATTY | 3 cut(s) | 1100, 1678, 3024 |
| XceI | RCATGY | 1 cut(s) | 2357 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 365 |
| XmiI | GTMKAC | 1 cut(s) | 986 |
| XspI | CTAG | 5 cut(s) | 68, 711, 741, 2327, 3379 |
| ZrmI | AGTACT | 1 cut(s) | 2433 |
| Zsp2I | ATGCAT | 1 cut(s) | 1846 |