Belongs to the argonaute family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Gly-rich_Ago1 | PF12764 | 92 - 189 | 2.5e-24 | Glycine-rich region of argonaut |
| ArgoN | PF16486 | 209 - 344 | 1.4e-37 | N-terminal domain of argonaute |
| ArgoL1 | PF08699 | 354 - 404 | 1.3e-21 | Argonaute linker 1 domain |
| PAZ | PF02170 | 410 - 536 | 3.3e-30 | PAZ domain |
| ArgoL2 | PF16488 | 546 - 592 | 7.5e-18 | Argonaute linker 2 domain |
| ArgoMid | PF16487 | 603 - 678 | 1.4e-09 | Mid domain of argonaute |
| Piwi | PF02171 | 695 - 1014 | 7e-116 | Piwi domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2084 |
| Acc16I | TGCGCA | 1 cut(s) | 1352 |
| Acc36I | ACCTGC | 3 cut(s) | 505, 960, 3178 |
| AccB1I | GGYRCC | 1 cut(s) | 98 |
| AccI | GTMKAC | 1 cut(s) | 818 |
| AccII | CGCG | 2 cut(s) | 561, 3017 |
| AclI | AACGTT | 1 cut(s) | 2220 |
| AclWI | GGATC | 9 cut(s) | 133, 208, 681, 1682, 1880, 2144, 2157, 2483, 2496 |
| AcoI | YGGCCR | 2 cut(s) | 238, 2402 |
| AcsI | RAATTY | 3 cut(s) | 932, 1882, 2856 |
| AcuI | CTGAAG | 3 cut(s) | 474, 995, 1704 |
| AdeI | CACNNNGTG | 3 cut(s) | 627, 722, 1112 |
| AflIII | ACRYGT | 2 cut(s) | 559, 2185 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1665 |
| AjiI | CACGTC | 1 cut(s) | 3092 |
| AjnI | CCWGG | 8 cut(s) | 367, 601, 999, 1084, 1383, 2282, 2350, 2785 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 10, 42 |
| Alw21I | GWGCWC | 7 cut(s) | 160, 2002, 2440, 2460, 3085, 3131, 3139 |
| Alw26I | GTCTC | 6 cut(s) | 574, 747, 971, 1585, 2138, 3044 |
| AlwI | GGATC | 9 cut(s) | 133, 208, 681, 1682, 1880, 2144, 2157, 2483, 2496 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1246 |
| Ama87I | CYCGRG | 1 cut(s) | 3132 |
| ApeKI | GCWGC | 6 cut(s) | 71, 400, 938, 2378, 2844, 3152 |
| ApoI | RAATTY | 3 cut(s) | 932, 1882, 2856 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 851, 1449 |
| AspLEI | GCGC | 4 cut(s) | 1353, 1629, 2330, 2660 |
| AspS9I | GGNCC | 9 cut(s) | 107, 278, 311, 359, 374, 827, 1006, 2605, 3143 |
| AsuC2I | CCSGG | 4 cut(s) | 901, 2064, 2876, 3141 |
| AsuHPI | GGTGA | 7 cut(s) | 16, 378, 430, 1124, 1627, 2135, 2807 |
| AvaI | CYCGRG | 1 cut(s) | 3132 |
| AvaII | GGWCC | 4 cut(s) | 107, 359, 827, 3143 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2781, 2814 |
| BamHI | GGATCC | 1 cut(s) | 2488 |
| BanI | GGYRCC | 1 cut(s) | 98 |
| BanII | GRGCYC | 3 cut(s) | 160, 1980, 2460 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 187, 219 |
| BauI | CACGAG | 1 cut(s) | 942 |
| BbsI | GAAGAC | 2 cut(s) | 1105, 1490 |
| Bbv12I | GWGCWC | 7 cut(s) | 160, 2002, 2440, 2460, 3085, 3131, 3139 |
| BbvCI | CCTCAGC | 2 cut(s) | 318, 444 |
| BbvI | GCAGC | 6 cut(s) | 58, 387, 925, 2390, 2856, 3139 |
| BccI | CCATC | 8 cut(s) | 385, 530, 780, 794, 2377, 2454, 2585, 2751 |
| BceAI | ACGGC | 2 cut(s) | 225, 3148 |
| BciT130I | CCWGG | 8 cut(s) | 369, 603, 1001, 1086, 1385, 2284, 2352, 2787 |
| BciVI | GTATCC | 1 cut(s) | 2173 |
| BclI | TGATCA | 1 cut(s) | 2008 |
| BcnI | CCSGG | 4 cut(s) | 901, 2064, 2876, 3141 |
| BcoDI | GTCTC | 6 cut(s) | 574, 747, 971, 1585, 2138, 3044 |
| BfaI | CTAG | 6 cut(s) | 30, 543, 573, 749, 1050, 3211 |
| BfmI | CTRYAG | 2 cut(s) | 2584, 2842 |
| BfoI | RGCGCY | 2 cut(s) | 1630, 2331 |
| BfuAI | ACCTGC | 3 cut(s) | 505, 960, 3178 |
| BfuI | GTATCC | 1 cut(s) | 2173 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 246 |
| BisI | GCNGC | 9 cut(s) | 72, 277, 401, 939, 2379, 2845, 2872, 3018, 3153 |
| BlsI | GCNGC | 9 cut(s) | 73, 278, 402, 940, 2380, 2846, 2873, 3019, 3154 |
| BmcAI | AGTACT | 1 cut(s) | 2265 |
| Bme18I | GGWCC | 4 cut(s) | 107, 359, 827, 3143 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1665 |
| BmeT110I | CYCGRG | 1 cut(s) | 3132 |
| BmgBI | CACGTC | 1 cut(s) | 3092 |
| BmgT120I | GGNCC | 9 cut(s) | 107, 278, 311, 359, 374, 827, 1006, 2605, 3143 |
| BmiI | GGNNCC | 8 cut(s) | 58, 100, 109, 590, 2490, 2670, 3045, 3144 |
| BmrI | ACTGGG | 2 cut(s) | 410, 2161 |
| BmsI | GCATC | 7 cut(s) | 982, 2035, 2263, 2350, 2583, 2629, 2911 |
| BmuI | ACTGGG | 2 cut(s) | 410, 2161 |
| BpiI | GAAGAC | 2 cut(s) | 1105, 1490 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 577, 609 |
| BpmI | CTGGAG | 3 cut(s) | 2266, 2687, 2912 |
| Bpu10I | CCTNAGC | 5 cut(s) | 318, 444, 483, 1734, 1974 |
| BpuEI | CTTGAG | 4 cut(s) | 1595, 1617, 2379, 2424 |
| BpuMI | CCSGG | 4 cut(s) | 901, 2064, 2876, 3141 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1284 |
| BsaI | GGTCTC | 2 cut(s) | 971, 3044 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 752, 782, 1308, 1338, 1845, 1875 |
| Bse118I | RCCGGY | 1 cut(s) | 783 |
| Bse3DI | GCAATG | 3 cut(s) | 1214, 2055, 2761 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1284 |
| BseBI | CCWGG | 8 cut(s) | 369, 603, 1001, 1086, 1385, 2284, 2352, 2787 |
| BseJI | GATNNNNATC | 1 cut(s) | 1284 |
| BseMI | GCAATG | 3 cut(s) | 1214, 2055, 2761 |
| BseRI | GAGGAG | 4 cut(s) | 28, 306, 348, 893 |
| BseXI | GCAGC | 6 cut(s) | 58, 387, 925, 2390, 2856, 3139 |
| BseYI | CCCAGC | 2 cut(s) | 60, 1239 |
| BsgI | GTGCAG | 4 cut(s) | 386, 662, 938, 3156 |
| Bsh1236I | CGCG | 2 cut(s) | 561, 3017 |
| Bsh1285I | CGRYCG | 3 cut(s) | 352, 2308, 2796 |
| BshNI | GGYRCC | 1 cut(s) | 98 |
| BsiEI | CGRYCG | 3 cut(s) | 352, 2308, 2796 |
| BsiHKAI | GWGCWC | 7 cut(s) | 160, 2002, 2440, 2460, 3085, 3131, 3139 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3132 |
| BsiSI | CCGG | 7 cut(s) | 102, 784, 901, 2063, 2405, 2876, 3140 |
| BslFI | GGGAC | 8 cut(s) | 51, 93, 897, 1366, 1575, 2265, 2515, 2917 |
| BsmAI | GTCTC | 6 cut(s) | 574, 747, 971, 1585, 2138, 3044 |
| BsmBI | CGTCTC | 1 cut(s) | 2138 |
| BsmFI | GGGAC | 8 cut(s) | 51, 93, 897, 1366, 1575, 2265, 2515, 2917 |
| Bso31I | GGTCTC | 2 cut(s) | 971, 3044 |
| BsoBI | CYCGRG | 1 cut(s) | 3132 |
| Bsp1286I | GDGCHC | 8 cut(s) | 160, 1980, 2002, 2440, 2460, 3085, 3131, 3139 |
| Bsp1407I | TGTACA | 2 cut(s) | 629, 2969 |
| Bsp19I | CCATGG | 2 cut(s) | 1536, 1763 |
| BspFNI | CGCG | 2 cut(s) | 561, 3017 |
| BspHI | TCATGA | 1 cut(s) | 1453 |
| BspLI | GGNNCC | 8 cut(s) | 58, 100, 109, 590, 2490, 2670, 3045, 3144 |
| BspMAI | CTGCAG | 1 cut(s) | 2846 |
| BspMI | ACCTGC | 3 cut(s) | 505, 960, 3178 |
| BspPI | GGATC | 9 cut(s) | 133, 208, 681, 1682, 1880, 2144, 2157, 2483, 2496 |
| BspQI | GCTCTTC | 1 cut(s) | 803 |
| BspT107I | GGYRCC | 1 cut(s) | 98 |
| BspTNI | GGTCTC | 2 cut(s) | 971, 3044 |
| BsrDI | GCAATG | 3 cut(s) | 1214, 2055, 2761 |
| BsrFI | RCCGGY | 1 cut(s) | 783 |
| BsrGI | TGTACA | 2 cut(s) | 629, 2969 |
| BssAI | RCCGGY | 1 cut(s) | 783 |
| BssNAI | GTATAC | 1 cut(s) | 819 |
| BssSI | CACGAG | 1 cut(s) | 942 |
| BssT1I | CCWWGG | 5 cut(s) | 112, 187, 1536, 1763, 2295 |
| Bst1107I | GTATAC | 1 cut(s) | 819 |
| Bst2BI | CACGAG | 1 cut(s) | 942 |
| Bst2UI | CCWGG | 8 cut(s) | 369, 603, 1001, 1086, 1385, 2284, 2352, 2787 |
| Bst6I | CTCTTC | 6 cut(s) | 5, 190, 600, 803, 837, 870 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2222, 3005 |
| BstAUI | TGTACA | 2 cut(s) | 629, 2969 |
| BstC8I | GCNNGC | 5 cut(s) | 450, 463, 785, 1130, 2656 |
| BstDSI | CCRYGG | 3 cut(s) | 241, 1536, 1763 |
| BstEII | GGTNACC | 2 cut(s) | 182, 1615 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 321, 2349 |
| BstFNI | CGCG | 2 cut(s) | 561, 3017 |
| BstH2I | RGCGCY | 2 cut(s) | 1630, 2331 |
| BstHHI | GCGC | 4 cut(s) | 1353, 1629, 2330, 2660 |
| BstMAI | GTCTC | 6 cut(s) | 574, 747, 971, 1585, 2138, 3044 |
| BstMCI | CGRYCG | 3 cut(s) | 352, 2308, 2796 |
| BstNI | CCWGG | 8 cut(s) | 369, 603, 1001, 1086, 1385, 2284, 2352, 2787 |
| BstNSI | RCATGY | 1 cut(s) | 2189 |
| BstPI | GGTNACC | 2 cut(s) | 182, 1615 |
| BstSFI | CTRYAG | 2 cut(s) | 2584, 2842 |
| BstUI | CGCG | 2 cut(s) | 561, 3017 |
| BstV1I | GCAGC | 6 cut(s) | 58, 387, 925, 2390, 2856, 3139 |
| BstV2I | GAAGAC | 2 cut(s) | 1105, 1490 |
| BstX2I | RGATCY | 8 cut(s) | 125, 200, 673, 1687, 1872, 2136, 2149, 2488 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1784 |
| BstYI | RGATCY | 8 cut(s) | 125, 200, 673, 1687, 1872, 2136, 2149, 2488 |
| BstZ17I | GTATAC | 1 cut(s) | 819 |
| BsuI | GTATCC | 1 cut(s) | 2173 |
| BtgI | CCRYGG | 3 cut(s) | 241, 1536, 1763 |
| BtrI | CACGTC | 1 cut(s) | 3092 |
| BtsIMutI | CAGTG | 8 cut(s) | 349, 1826, 1912, 2002, 2174, 2486, 2663, 3173 |
| BveI | ACCTGC | 3 cut(s) | 505, 960, 3178 |
| Cac8I | GCNNGC | 5 cut(s) | 450, 463, 785, 1130, 2656 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1246 |
| CciI | TCATGA | 1 cut(s) | 1453 |
| CfoI | GCGC | 4 cut(s) | 1353, 1629, 2330, 2660 |
| Cfr10I | RCCGGY | 1 cut(s) | 783 |
| Cfr13I | GGNCC | 9 cut(s) | 107, 278, 311, 359, 374, 827, 1006, 2605, 3143 |
| CseI | GACGC | 3 cut(s) | 53, 2347, 2702 |
| CsiI | ACCWGGT | 1 cut(s) | 2785 |
| DraI | TTTAAA | 3 cut(s) | 1179, 2130, 2476 |
| DraIII | CACNNNGTG | 3 cut(s) | 627, 722, 1112 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2084 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1665 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2084 |
| EaeI | YGGCCR | 2 cut(s) | 238, 2402 |
| Eam1104I | CTCTTC | 6 cut(s) | 5, 190, 600, 803, 837, 870 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1665 |
| EarI | CTCTTC | 6 cut(s) | 5, 190, 600, 803, 837, 870 |
| EciI | GGCGGA | 2 cut(s) | 120, 150 |
| Ecl136II | GAGCTC | 2 cut(s) | 158, 2458 |
| Eco130I | CCWWGG | 5 cut(s) | 112, 187, 1536, 1763, 2295 |
| Eco147I | AGGCCT | 1 cut(s) | 2654 |
| Eco24I | GRGCYC | 3 cut(s) | 160, 1980, 2460 |
| Eco31I | GGTCTC | 2 cut(s) | 971, 3044 |
| Eco47I | GGWCC | 4 cut(s) | 107, 359, 827, 3143 |
| Eco53kI | GAGCTC | 2 cut(s) | 158, 2458 |
| Eco57I | CTGAAG | 3 cut(s) | 474, 995, 1704 |
| Eco88I | CYCGRG | 1 cut(s) | 3132 |
| Eco91I | GGTNACC | 2 cut(s) | 182, 1615 |
| EcoICRI | GAGCTC | 2 cut(s) | 158, 2458 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 321, 2349 |
| EcoO109I | RGGNCCY | 4 cut(s) | 107, 311, 359, 1006 |
| EcoO65I | GGTNACC | 2 cut(s) | 182, 1615 |
| EcoRI | GAATTC | 1 cut(s) | 2856 |
| EcoRII | CCWGG | 8 cut(s) | 367, 601, 999, 1084, 1383, 2282, 2350, 2785 |
| EcoT14I | CCWWGG | 5 cut(s) | 112, 187, 1536, 1763, 2295 |
| EcoT38I | GRGCYC | 3 cut(s) | 160, 1980, 2460 |
| ErhI | CCWWGG | 5 cut(s) | 112, 187, 1536, 1763, 2295 |
| Esp3I | CGTCTC | 1 cut(s) | 2138 |
| FaqI | GGGAC | 8 cut(s) | 51, 93, 897, 1366, 1575, 2265, 2515, 2917 |
| FauI | CCCGC | 2 cut(s) | 76, 1898 |
| FauNDI | CATATG | 1 cut(s) | 2959 |
| FbaI | TGATCA | 1 cut(s) | 2008 |
| FblI | GTMKAC | 1 cut(s) | 818 |
| Fnu4HI | GCNGC | 9 cut(s) | 72, 277, 401, 939, 2379, 2845, 2872, 3018, 3153 |
| FriOI | GRGCYC | 3 cut(s) | 160, 1980, 2460 |
| Fsp4HI | GCNGC | 9 cut(s) | 72, 277, 401, 939, 2379, 2845, 2872, 3018, 3153 |
| FspBI | CTAG | 6 cut(s) | 30, 543, 573, 749, 1050, 3211 |
| FspI | TGCGCA | 1 cut(s) | 1352 |
| GlaI | GCGC | 4 cut(s) | 1352, 1628, 2329, 2659 |
| GluI | GCNGC | 9 cut(s) | 72, 277, 401, 939, 2379, 2845, 2872, 3018, 3153 |
| GsaI | CCCAGC | 2 cut(s) | 64, 1243 |
| GsuI | CTGGAG | 3 cut(s) | 2266, 2687, 2912 |
| HaeII | RGCGCY | 2 cut(s) | 1630, 2331 |
| HapII | CCGG | 7 cut(s) | 102, 784, 901, 2063, 2405, 2876, 3140 |
| HgaI | GACGC | 3 cut(s) | 53, 2347, 2702 |
| HhaI | GCGC | 4 cut(s) | 1353, 1629, 2330, 2660 |
| Hin6I | GCGC | 4 cut(s) | 1351, 1627, 2328, 2658 |
| HinP1I | GCGC | 4 cut(s) | 1351, 1627, 2328, 2658 |
| HinfI | GANTC | 9 cut(s) | 50, 435, 767, 1249, 1280, 1726, 2059, 2360, 2801 |
| HpaII | CCGG | 7 cut(s) | 102, 784, 901, 2063, 2405, 2876, 3140 |
| HphI | GGTGA | 7 cut(s) | 16, 378, 430, 1124, 1627, 2135, 2807 |
| Hpy166II | GTNNAC | 8 cut(s) | 630, 727, 819, 2204, 2800, 2913, 2970, 2972 |
| Hpy188I | TCNGA | 9 cut(s) | 49, 397, 493, 920, 1279, 1285, 1941, 3026, 3058 |
| Hpy8I | GTNNAC | 8 cut(s) | 630, 727, 819, 2204, 2800, 2913, 2970, 2972 |
| HpyCH4IV | ACGT | 5 cut(s) | 1379, 1666, 1896, 2220, 3091 |
| HpySE526I | ACGT | 5 cut(s) | 1379, 1666, 1896, 2220, 3091 |
| HspAI | GCGC | 4 cut(s) | 1351, 1627, 2328, 2658 |
| KroI | GCCGGC | 1 cut(s) | 783 |
| KroNI | GCCGGC | 1 cut(s) | 785 |
| Ksp22I | TGATCA | 1 cut(s) | 2008 |
| LguI | GCTCTTC | 1 cut(s) | 803 |
| Lsp1109I | GCAGC | 6 cut(s) | 58, 387, 925, 2390, 2856, 3139 |
| LweI | GCATC | 7 cut(s) | 982, 2035, 2263, 2350, 2583, 2629, 2911 |
| MabI | ACCWGGT | 1 cut(s) | 2785 |
| MaeI | CTAG | 6 cut(s) | 30, 543, 573, 749, 1050, 3211 |
| MaeII | ACGT | 5 cut(s) | 1379, 1666, 1896, 2220, 3091 |
| MfeI | CAATTG | 3 cut(s) | 1867, 2373, 2760 |
| MflI | RGATCY | 8 cut(s) | 125, 200, 673, 1687, 1872, 2136, 2149, 2488 |
| MhlI | GDGCHC | 8 cut(s) | 160, 1980, 2002, 2440, 2460, 3085, 3131, 3139 |
| MluI | ACGCGT | 1 cut(s) | 559 |
| MlyI | GAGTC | 3 cut(s) | 59, 761, 2795 |
| MmeI | TCCRAC | 4 cut(s) | 278, 1181, 1486, 1795 |
| MroNI | GCCGGC | 1 cut(s) | 783 |
| MroXI | GAANNNNTTC | 2 cut(s) | 851, 1449 |
| MslI | CAYNNNNRTG | 3 cut(s) | 684, 2886, 3090 |
| MspA1I | CMGCKG | 2 cut(s) | 71, 2381 |
| MspI | CCGG | 7 cut(s) | 102, 784, 901, 2063, 2405, 2876, 3140 |
| MssI | GTTTAAAC | 1 cut(s) | 2476 |
| MunI | CAATTG | 3 cut(s) | 1867, 2373, 2760 |
| MvaI | CCWGG | 8 cut(s) | 369, 603, 1001, 1086, 1385, 2284, 2352, 2787 |
| MvnI | CGCG | 2 cut(s) | 561, 3017 |
| NaeI | GCCGGC | 1 cut(s) | 785 |
| NciI | CCSGG | 4 cut(s) | 901, 2064, 2876, 3141 |
| NcoI | CCATGG | 2 cut(s) | 1536, 1763 |
| NdeI | CATATG | 1 cut(s) | 2959 |
| NgoMIV | GCCGGC | 1 cut(s) | 783 |
| NlaIV | GGNNCC | 8 cut(s) | 58, 100, 109, 590, 2490, 2670, 3045, 3144 |
| NmeAIII | GCCGAG | 1 cut(s) | 356 |
| NmuCI | GTSAC | 7 cut(s) | 709, 1234, 1615, 1946, 2335, 2689, 2813 |
| NsbI | TGCGCA | 1 cut(s) | 1352 |
| NspI | RCATGY | 1 cut(s) | 2189 |
| PaeR7I | CTCGAG | 1 cut(s) | 3132 |
| PagI | TCATGA | 1 cut(s) | 1453 |
| PceI | AGGCCT | 1 cut(s) | 2654 |
| PciI | ACATGT | 1 cut(s) | 2185 |
| PciSI | GCTCTTC | 1 cut(s) | 803 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3130 |
| PdiI | GCCGGC | 1 cut(s) | 785 |
| PdmI | GAANNNNTTC | 2 cut(s) | 851, 1449 |
| PfeI | GAWTC | 6 cut(s) | 435, 1249, 1280, 1726, 2059, 2360 |
| PflFI | GACNNNGTC | 1 cut(s) | 2506 |
| PkrI | GCNGC | 9 cut(s) | 73, 278, 402, 940, 2380, 2846, 2873, 3019, 3154 |
| PleI | GAGTC | 3 cut(s) | 58, 761, 2795 |
| PmeI | GTTTAAAC | 1 cut(s) | 2476 |
| PpsI | GAGTC | 3 cut(s) | 58, 761, 2795 |
| PpuMI | RGGWCCY | 2 cut(s) | 107, 359 |
| PscI | ACATGT | 1 cut(s) | 2185 |
| Psp124BI | GAGCTC | 2 cut(s) | 160, 2460 |
| Psp1406I | AACGTT | 1 cut(s) | 2220 |
| Psp5II | RGGWCCY | 2 cut(s) | 107, 359 |
| Psp6I | CCWGG | 8 cut(s) | 367, 601, 999, 1084, 1383, 2282, 2350, 2785 |
| PspEI | GGTNACC | 2 cut(s) | 182, 1615 |
| PspFI | CCCAGC | 2 cut(s) | 60, 1239 |
| PspGI | CCWGG | 8 cut(s) | 367, 601, 999, 1084, 1383, 2282, 2350, 2785 |
| PspN4I | GGNNCC | 8 cut(s) | 58, 100, 109, 590, 2490, 2670, 3045, 3144 |
| PspPI | GGNCC | 9 cut(s) | 107, 278, 311, 359, 374, 827, 1006, 2605, 3143 |
| PspPPI | RGGWCCY | 2 cut(s) | 107, 359 |
| PspXI | VCTCGAGB | 1 cut(s) | 3132 |
| PstI | CTGCAG | 1 cut(s) | 2846 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1246 |
| PsuI | RGATCY | 8 cut(s) | 125, 200, 673, 1687, 1872, 2136, 2149, 2488 |
| PsyI | GACNNNGTC | 1 cut(s) | 2506 |
| PvuII | CAGCTG | 1 cut(s) | 2381 |
| RseI | CAYNNNNRTG | 3 cut(s) | 684, 2886, 3090 |
| SacI | GAGCTC | 2 cut(s) | 160, 2460 |
| SapI | GCTCTTC | 1 cut(s) | 803 |
| SatI | GCNGC | 9 cut(s) | 72, 277, 401, 939, 2379, 2845, 2872, 3018, 3153 |
| Sau96I | GGNCC | 9 cut(s) | 107, 278, 311, 359, 374, 827, 1006, 2605, 3143 |
| ScaI | AGTACT | 1 cut(s) | 2265 |
| SchI | GAGTC | 3 cut(s) | 59, 761, 2795 |
| SduI | GDGCHC | 8 cut(s) | 160, 1980, 2002, 2440, 2460, 3085, 3131, 3139 |
| SexAI | ACCWGGT | 1 cut(s) | 2785 |
| SfaNI | GCATC | 7 cut(s) | 982, 2035, 2263, 2350, 2583, 2629, 2911 |
| SfcI | CTRYAG | 2 cut(s) | 2584, 2842 |
| Sfr274I | CTCGAG | 1 cut(s) | 3132 |
| SinI | GGWCC | 4 cut(s) | 107, 359, 827, 3143 |
| SlaI | CTCGAG | 1 cut(s) | 3132 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 684, 2886, 3090 |
| SmlI | CTYRAG | 5 cut(s) | 1610, 1632, 2394, 2439, 3132 |
| SmoI | CTYRAG | 5 cut(s) | 1610, 1632, 2394, 2439, 3132 |
| SseBI | AGGCCT | 1 cut(s) | 2654 |
| SspI | AATATT | 1 cut(s) | 1183 |
| SspMI | CTAG | 6 cut(s) | 30, 543, 573, 749, 1050, 3211 |
| SstI | GAGCTC | 2 cut(s) | 160, 2460 |
| StuI | AGGCCT | 1 cut(s) | 2654 |
| StyI | CCWWGG | 5 cut(s) | 112, 187, 1536, 1763, 2295 |
| TaiI | ACGT | 5 cut(s) | 1382, 1669, 1899, 2223, 3094 |
| TaqI | TCGA | 5 cut(s) | 845, 1196, 2002, 2035, 3133 |
| TatI | WGTACW | 3 cut(s) | 629, 2263, 2969 |
| TauI | GCSGC | 3 cut(s) | 279, 2874, 3020 |
| TfiI | GAWTC | 6 cut(s) | 435, 1249, 1280, 1726, 2059, 2360 |
| TscAI | CASTG | 8 cut(s) | 349, 1826, 1912, 2002, 2174, 2486, 2670, 3180 |
| TseFI | GTSAC | 7 cut(s) | 709, 1234, 1615, 1946, 2335, 2689, 2813 |
| TseI | GCWGC | 6 cut(s) | 71, 400, 938, 2378, 2844, 3152 |
| Tsp45I | GTSAC | 7 cut(s) | 709, 1234, 1615, 1946, 2335, 2689, 2813 |
| TspDTI | ATGAA | 9 cut(s) | 1062, 1431, 1442, 1445, 1470, 1847, 1944, 2646, 2916 |
| TspGWI | ACGGA | 4 cut(s) | 820, 2162, 2269, 3139 |
| TspRI | CASTG | 8 cut(s) | 349, 1826, 1912, 2002, 2174, 2486, 2670, 3180 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2506 |
| VpaK11BI | GGWCC | 4 cut(s) | 107, 359, 827, 3143 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 321, 2349 |
| XapI | RAATTY | 3 cut(s) | 932, 1882, 2856 |
| XceI | RCATGY | 1 cut(s) | 2189 |
| XhoI | CTCGAG | 1 cut(s) | 3132 |
| XmiI | GTMKAC | 1 cut(s) | 818 |
| XmnI | GAANNNNTTC | 2 cut(s) | 851, 1449 |
| XspI | CTAG | 6 cut(s) | 30, 543, 573, 749, 1050, 3211 |
| ZrmI | AGTACT | 1 cut(s) | 2265 |