Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001348

Physical Location & Seq

Genomic Coordinates Forward (+)

54944661 .. 54949251

Gene Structure 4591 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0405700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGGTTGGGGAGCGCTCCGATAAAGTAATAGTGGCGGTGAAGGCGGAGAAGGTGATTTCCAACACCGCGTTGGCATGGGCGCTCACTCACGTAGTTCAACCCGGCGACTGCGTCACCTTGCTCGCCATCATCTCTCCCCTTAAAACTGGTAACAGGTTCTGGAGATTTCCGAGATTCAGCGGAGACTGCGGGAGTCGGCGCAGGGAGGATTTGCCGGATCGGATTTGTCAGATCTCCGAGTCTTGTTCTCAGATGGTGCTTCAGTTTCATAATCAAATCCAGGTAACAGTGAGGATTAAGGTAGTTTTAAGTACTCCCGGTGGTACTGTGGCAGCTGAAGCAACATACAATGGAGCCAACTGGGTCGTACTGGACAAAAAACTGAAACAAGAGAGGAAGCATTGCATGGAGGAACTTGGATGCAACATTGTTGTAATGAACGGGTCTCAGCCTAAAGTCCTAAAGCTGAATCTGGGGTGCTCAGATGAACTCCAAACCCAATTCTTTTCTGCTGCTTCCTCACCAGGAACTCGCCTTCGAAGATTGGAAGAGCATAGGATGAATACCACTCCAGTGAGTAGTCCTGAAGAACCAAGTAGCTCCTGCACAAGAACGACAGGGGAAGGTTCATCATCAAGTTACGACACTGTGACTTCTCTTTTCCTTGTCTATGAGCAGAATCCTTTATTTGAAGGACAACAAGTGAGAAATCACAGACCACATGATTTGGAAGATCCATATGAAGAACTTGACTCAATTGGAGAAAGGCTTATAACTCTGTGTAAGCCCCAAACATCAACTCTAGCTTCTACGCAGAGTGTCTTATGGATCCCTCAAAACCACAGTGGTGATAGAAAGCACTCCAAACCCCAAGCTTATAAAAAATCACACAAAGTAAGATCTCCCACTTTCCAAACTCTATTTGACGAGTATGCACAGTTTGATCAAGATACAAGCATTGACAGAGCTGAACCCAGGGAAAACCATAACAAAGGCTACATTACTAATTCAAACATTAGGGATGCTGTTTCCTTGGGTACATCTTCCTCAATACCTCCTCCTTTATGCTCTCTATGCCAACATAAAACACCAGTTTTTGGAAAACCTCCAAAACAGTTCTCTTACCAAGAATTAGAGGAAGCTACGGACGCGTTCTCAGATGTTAACTTCTTGGCAGAAGGTGGCTTCGGTGTGGTTCATAGAGGGGTGTTGAGAGACGGCCAAATTATTGCCGTGAAGCAGTTGAAGTTCGGTGGTTCTCAAGCAGATGCTGATTTCTGTAGGGAAGTGCGTGTATTGAGCTGTGCACAACACAGGAATGTTGTGTTGCTCATTGGGTATTGTATTGAAGGCAAGTCAAGGTTACTGGTTTATGAGTACATCTGCAACAGCTCCTTGGATTTCCATTTACATGGAAACAGAACTCCCCTGGATTACGAATCAAGGCTAAAGATAGCTACTGGAACTGCTCGTGGATTAAGATATCTTCATGAAGATTGCAGAGTGGGTTGTATAGTGCACAGAGACCTCAGACCGAACAATATCCTTCTGACCCACGATTTTGAACCTCTGGTTGCGGACTTTGGGCTTGCTAGATGGCACTCTGAATGGGAGACCAGCACTGAGGACCGGTGTATTGGAACTTCAGGGTATCTTGCACCAGAATATATAGACAGTGGTCAAATTACACATAAGGTAGATGTGTACGCATTTGGAGTTGTTTTGTTGGAGCTTATGACAGGTCGGAGAATCGGTGAATTGCATTATGTCAGGGGACATCATTTTTTGGAAGAATGGTTGCACCGGTTAGCTACATTAGAGCCAAACCATATCTCACCAATTTCCTATCACTTGCTGGATCCAAACATGGCCTCCGAATCCCCCGACTTTCCCTATCAACTACAGGCAATGGCTCGTGCTGCTTCCTTGTGTCTTCGTCGAGATCCTGAATTCAGACCCTCAATGTCAAAGTTAATCAGAGTACTAGAAGGAGGTGATCCAGTTGTTCCTATTGGCCTGGACTTGAACACAGTTGGTAGTAGAAGTGGCCATTTGCCTGGACTAAGCTCACAAAGGCAGCCTAAACCCAGAGGAAACCACTCTCGTAAACTATCACATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005618 GO:0005623 GO:0008150 GO:0008194 GO:0016157 GO:0016740 GO:0016757 GO:0016758 GO:0030312 GO:0033036 GO:0033037 GO:0035251 GO:0044464 GO:0046527 GO:0051179 GO:0052545 GO:0071944 GO:0080165

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glycos_transf_1 Sucrose_synth

Protein Analysis

706

Amino Acids

79.13

Weight (kDa)

7.16

Isoelectric Point (pI)

45.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	388 - 659	5.2e-40	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	391 - 661	1e-41	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001348)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48410 AT1G48410 AT1G48410
fragaria_vesca	FvH4_5g18150 FvH4_5g18150 FvH4_5g18151
malus_domestica	MD00G1034100.v1.1 MD03G1126300.v1.1 MD06G1237000.v1.1 MD06G1237100.v1.1 MD14G1243900.v1.1
prunus_persica	Prupe.5G241500_v2.0.a1 Prupe.5G241600_v2.0.a1 Prupe.5G241600_v2.0.a1 Prupe.5G241600_v2.0.a1 Prupe.5G241600_v2.0.a1
pyrus_communis	pycom06g21250 pycom06g21260 pycom14g20500
rosa_chinensis	RchiOBHm_Chr1g0366981 RchiOBHm_Chr7g0177431 RchiOBHm_Chr7g0177451 RchiOBHm_Chr7g0177461
rosa_laevigata	RLG00000005536 RLG00000005537
rosa_multiflora	Rmu_co8018924.1_g000001 Rmu_co8176236.1_g000001 Rmu_co8292499.1_g000001 Rmu_co8369415.1_g000001 Rmu_sc0000898.1_g000080
rosa_roxburghii	Rroxscaffold_3G00244030 Rroxscaffold_3G00275860 Rroxscaffold_3G00275870
rosa_rugosa	Rorug06G0405700 Rorug06G0405700 Rorug06G0405800 Rorug06G0405900 Rorug06G0406000 Rorug06G0406100 Rorug06G0406200 Rorug07G0155200
rosa_samantha	Rh7AG005500 Rh7AG005700 Rh7AG291500 Rh7BG005500 Rh7BG005600 Rh7CG005700 Rh7CG005800 Rh7CG311700 Rh7DG005300 Rh7DG005500 Rh7DG295300
rosa_wichuraiana	Rw7G000460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	773, 879
AccB7I	CCANNNNNTGG	1 cut(s)	1097
AccII	CGCG	2 cut(s)	68, 1151
AciI	CCGC	6 cut(s)	35, 44, 66, 180, 189, 1577
AclWI	GGATC	8 cut(s)	225, 728, 823, 836, 1853, 1866, 1937, 1991
AcoI	YGGCCR	2 cut(s)	1219, 2047
AcsI	RAATTY	1 cut(s)	1949
AcuI	CTGAAG	4 cut(s)	245, 357, 606, 1629
AfaI	GTAC	7 cut(s)	313, 325, 369, 1039, 1379, 1706, 1983
AfeI	AGCGCT	1 cut(s)	14
AfiI	CCNNNNNNNGG	1 cut(s)	1097
AflIII	ACRYGT	1 cut(s)	1149
AgeI	ACCGGT	2 cut(s)	1629, 1803
AgsI	TTSAA	7 cut(s)	98, 692, 1011, 1246, 1349, 1565, 2026
AjnI	CCWGG	6 cut(s)	279, 523, 974, 1428, 2016, 2056
AleI	CACNNNNGTG	2 cut(s)	572, 846
Alw21I	GWGCWC	3 cut(s)	482, 1309, 1521
Alw26I	GTCTC	5 cut(s)	177, 450, 1209, 1518, 1607
Alw44I	GTGCAC	2 cut(s)	1305, 1517
AlwI	GGATC	8 cut(s)	225, 728, 823, 836, 1853, 1866, 1937, 1991
AlwNI	CAGNNNCTG	2 cut(s)	159, 1271
Aor51HI	AGCGCT	1 cut(s)	14
AoxI	GGCC	4 cut(s)	1219, 1869, 2014, 2047
ApaLI	GTGCAC	2 cut(s)	1305, 1517
ApeKI	GCWGC	4 cut(s)	332, 512, 1919, 2077
ApoI	RAATTY	1 cut(s)	1949
AsiGI	ACCGGT	2 cut(s)	1629, 1803
AspLEI	GCGC	3 cut(s)	15, 82, 201
AspS9I	GGNCC	1 cut(s)	1627
AsuC2I	CCSGG	2 cut(s)	102, 318
AsuHPI	GGTGA	8 cut(s)	49, 64, 106, 513, 860, 1766, 1827, 2006
AsuII	TTCGAA	1 cut(s)	538
AvaII	GGWCC	1 cut(s)	1627
BaeGI	GKGCMC	2 cut(s)	1309, 1521
BalI	TGGCCA	1 cut(s)	2049
BamHI	GGATCC	2 cut(s)	828, 1858
BarI	GAAGNNNNNNTAC	2 cut(s)	1627, 1659
BauI	CACGAG	2 cut(s)	1470, 1914
BbsI	GAAGAC	1 cut(s)	1925
Bbv12I	GWGCWC	3 cut(s)	482, 1309, 1521
BbvI	GCAGC	4 cut(s)	344, 499, 1906, 2089
BccI	CCATC	3 cut(s)	134, 247, 1590
BceAI	ACGGC	2 cut(s)	1217, 1234
BciT130I	CCWGG	6 cut(s)	281, 525, 976, 1430, 2018, 2058
BclI	TGATCA	1 cut(s)	943
BcnI	CCSGG	2 cut(s)	102, 318
BcoDI	GTCTC	5 cut(s)	177, 450, 1209, 1518, 1607
BfaI	CTAG	3 cut(s)	803, 1593, 1985
BfmI	CTRYAG	2 cut(s)	1279, 1901
BfoI	RGCGCY	2 cut(s)	16, 83
BglII	AGATCT	2 cut(s)	231, 899
BisI	GCNGC	4 cut(s)	333, 513, 1920, 2078
BlsI	GCNGC	4 cut(s)	334, 514, 1921, 2079
BmcAI	AGTACT	2 cut(s)	313, 1983
Bme1390I	CCNGG	8 cut(s)	102, 281, 318, 525, 976, 1430, 2018, 2058
Bme18I	GGWCC	1 cut(s)	1627
BmgT120I	GGNCC	1 cut(s)	1627
BmiI	GGNNCC	3 cut(s)	355, 830, 1860
BmrFI	CCNGG	8 cut(s)	102, 281, 318, 525, 976, 1430, 2018, 2058
BmrI	ACTGGG	1 cut(s)	370
BmsI	GCATC	3 cut(s)	410, 1012, 1258
BmuI	ACTGGG	1 cut(s)	370
BoxI	GACNNNNGTC	1 cut(s)	1677
BpiI	GAAGAC	1 cut(s)	1925
BpmI	CTGGAG	2 cut(s)	181, 555
Bpu14I	TTCGAA	1 cut(s)	538
BpuEI	CTTGAG	1 cut(s)	1245
BpuMI	CCSGG	2 cut(s)	102, 318
BsaAI	YACGTR	1 cut(s)	91
BsaI	GGTCTC	3 cut(s)	450, 1518, 1607
BsaJI	CCNNGG	5 cut(s)	974, 975, 1032, 1395, 1428
BsaWI	WCCGGW	2 cut(s)	1629, 1803
BsaXI	ACNNNNNCTCC	4 cut(s)	1738, 1768, 1856, 1886
Bsc4I	CCNNNNNNNGG	1 cut(s)	1097
Bse118I	RCCGGY	2 cut(s)	1629, 1803
Bse1I	ACTGG	8 cut(s)	151, 365, 375, 572, 1091, 1371, 1465, 2000
Bse3DI	GCAATG	2 cut(s)	400, 1914
BseBI	CCWGG	6 cut(s)	281, 525, 976, 1430, 2018, 2058
BseDI	CCNNGG	5 cut(s)	974, 975, 1032, 1395, 1428
BseGI	GGATG	3 cut(s)	425, 564, 1027
BseLI	CCNNNNNNNGG	1 cut(s)	1097
BseMI	GCAATG	2 cut(s)	400, 1914
BseMII	CTCAG	6 cut(s)	263, 461, 495, 1170, 1543, 1614
BseNI	ACTGG	8 cut(s)	151, 365, 375, 572, 1091, 1371, 1465, 2000
BseRI	GAGGAG	1 cut(s)	1047
BseSI	GKGCMC	2 cut(s)	1309, 1521
BseXI	GCAGC	4 cut(s)	344, 499, 1906, 2089
BsgI	GTGCAG	1 cut(s)	589
Bsh1236I	CGCG	2 cut(s)	68, 1151
BshFI	GGCC	4 cut(s)	1221, 1871, 2016, 2049
BshTI	ACCGGT	2 cut(s)	1629, 1803
BsiHKAI	GWGCWC	3 cut(s)	482, 1309, 1521
BsiSI	CCGG	5 cut(s)	102, 215, 318, 1630, 1804
BslFI	GGGAC	1 cut(s)	1788
BslI	CCNNNNNNNGG	1 cut(s)	1097
BsmAI	GTCTC	5 cut(s)	177, 450, 1209, 1518, 1607
BsmBI	CGTCTC	1 cut(s)	1209
BsmFI	GGGAC	1 cut(s)	1788
BsnI	GGCC	4 cut(s)	1221, 1871, 2016, 2049
Bso31I	GGTCTC	3 cut(s)	450, 1518, 1607
Bsp119I	TTCGAA	1 cut(s)	538
Bsp1286I	GDGCHC	3 cut(s)	482, 1309, 1521
Bsp143I	GATC	9 cut(s)	217, 231, 733, 828, 899, 943, 1858, 1942, 1996
BspACI	CCGC	6 cut(s)	35, 44, 66, 180, 189, 1577
BspANI	GGCC	4 cut(s)	1221, 1871, 2016, 2049
BspCNI	CTCAG	6 cut(s)	262, 460, 494, 1169, 1542, 1615
BspFNI	CGCG	2 cut(s)	68, 1151
BspHI	TCATGA	1 cut(s)	1489
BspLI	GGNNCC	3 cut(s)	355, 830, 1860
BspPI	GGATC	8 cut(s)	225, 728, 823, 836, 1853, 1866, 1937, 1991
BspQI	GCTCTTC	1 cut(s)	543
BspT104I	TTCGAA	1 cut(s)	538
BspTNI	GGTCTC	3 cut(s)	450, 1518, 1607
BsrDI	GCAATG	2 cut(s)	400, 1914
BsrFI	RCCGGY	2 cut(s)	1629, 1803
BsrI	ACTGG	8 cut(s)	151, 365, 375, 572, 1091, 1371, 1465, 2000
BssAI	RCCGGY	2 cut(s)	1629, 1803
BssECI	CCNNGG	5 cut(s)	974, 975, 1032, 1395, 1428
BssMI	GATC	9 cut(s)	217, 231, 733, 828, 899, 943, 1858, 1942, 1996
BssSI	CACGAG	2 cut(s)	1470, 1914
BssT1I	CCWWGG	2 cut(s)	1032, 1395
Bst2BI	CACGAG	2 cut(s)	1470, 1914
Bst2UI	CCWGG	6 cut(s)	281, 525, 976, 1430, 2018, 2058
Bst4CI	ACNGT	8 cut(s)	289, 328, 649, 845, 939, 1116, 1676, 2032
Bst6I	CTCTTC	1 cut(s)	543
BstBAI	YACGTR	1 cut(s)	91
BstBI	TTCGAA	1 cut(s)	538
BstC8I	GCNNGC	2 cut(s)	123, 1590
BstDEI	CTNAG	7 cut(s)	249, 447, 481, 1156, 1529, 1623, 2063
BstF5I	GGATG	3 cut(s)	425, 564, 1027
BstFNI	CGCG	2 cut(s)	68, 1151
BstH2I	RGCGCY	2 cut(s)	16, 83
BstHHI	GCGC	3 cut(s)	15, 82, 201
BstKTI	GATC	9 cut(s)	220, 234, 736, 831, 902, 946, 1861, 1945, 1999
BstMAI	GTCTC	5 cut(s)	177, 450, 1209, 1518, 1607
BstMBI	GATC	9 cut(s)	217, 231, 733, 828, 899, 943, 1858, 1942, 1996
BstMWI	GCNNNNNNNGC	6 cut(s)	41, 186, 338, 1074, 1148, 1919
BstNI	CCWGG	6 cut(s)	281, 525, 976, 1430, 2018, 2058
BstPAI	GACNNNNGTC	1 cut(s)	1677
BstSCI	CCNGG	8 cut(s)	100, 279, 316, 523, 974, 1428, 2016, 2056
BstSFI	CTRYAG	2 cut(s)	1279, 1901
BstSLI	GKGCMC	2 cut(s)	1309, 1521
BstUI	CGCG	2 cut(s)	68, 1151
BstV1I	GCAGC	4 cut(s)	344, 499, 1906, 2089
BstV2I	GAAGAC	1 cut(s)	1925
BstX2I	RGATCY	6 cut(s)	231, 733, 828, 899, 1858, 1942
BstXI	CCANNNNNNTGG	2 cut(s)	1412, 2057
BstYI	RGATCY	6 cut(s)	231, 733, 828, 899, 1858, 1942
BsuRI	GGCC	4 cut(s)	1221, 1871, 2016, 2049
BtsCI	GGATG	3 cut(s)	425, 564, 1027
BtsIMutI	CAGTG	6 cut(s)	294, 579, 645, 850, 1620, 1681
Cac8I	GCNNGC	2 cut(s)	123, 1590
CaiI	CAGNNNCTG	2 cut(s)	159, 1271
CciI	TCATGA	1 cut(s)	1489
CfoI	GCGC	3 cut(s)	15, 82, 201
Cfr10I	RCCGGY	2 cut(s)	1629, 1803
Cfr13I	GGNCC	1 cut(s)	1627
CseI	GACGC	2 cut(s)	100, 1157
Csp6I	GTAC	7 cut(s)	312, 324, 368, 1038, 1378, 1705, 1982
CspAI	ACCGGT	2 cut(s)	1629, 1803
CspCI	CAANNNNNGTGG	2 cut(s)	708, 743
CviAII	CATG	6 cut(s)	75, 406, 722, 1412, 1490, 1867
CviQI	GTAC	7 cut(s)	312, 324, 368, 1038, 1378, 1705, 1982
DdeI	CTNAG	7 cut(s)	249, 447, 481, 1156, 1529, 1623, 2063
DpnI	GATC	9 cut(s)	219, 233, 735, 830, 901, 945, 1860, 1944, 1998
DpnII	GATC	9 cut(s)	217, 231, 733, 828, 899, 943, 1858, 1942, 1996
EaeI	YGGCCR	2 cut(s)	1219, 2047
Eam1104I	CTCTTC	1 cut(s)	543
EarI	CTCTTC	1 cut(s)	543
EciI	GGCGGA	1 cut(s)	59
Eco130I	CCWWGG	2 cut(s)	1032, 1395
Eco31I	GGTCTC	3 cut(s)	450, 1518, 1607
Eco32I	GATATC	1 cut(s)	1484
Eco47I	GGWCC	1 cut(s)	1627
Eco47III	AGCGCT	1 cut(s)	14
Eco57I	CTGAAG	4 cut(s)	245, 357, 606, 1629
EcoRI	GAATTC	1 cut(s)	1949
EcoRII	CCWGG	6 cut(s)	279, 523, 974, 1428, 2016, 2056
EcoRV	GATATC	1 cut(s)	1484
EcoT14I	CCWWGG	2 cut(s)	1032, 1395
ErhI	CCWWGG	2 cut(s)	1032, 1395
Esp3I	CGTCTC	1 cut(s)	1209
FaeI	CATG	6 cut(s)	78, 409, 725, 1415, 1493, 1870
FaqI	GGGAC	1 cut(s)	1788
FatI	CATG	6 cut(s)	74, 405, 721, 1411, 1489, 1866
FauI	CCCGC	1 cut(s)	182
FauNDI	CATATG	1 cut(s)	739
FbaI	TGATCA	1 cut(s)	943
Fnu4HI	GCNGC	4 cut(s)	333, 513, 1920, 2078
FokI	GGATG	3 cut(s)	432, 571, 1034
Fsp4HI	GCNGC	4 cut(s)	333, 513, 1920, 2078
FspBI	CTAG	3 cut(s)	803, 1593, 1985
GlaI	GCGC	3 cut(s)	14, 81, 200
GluI	GCNGC	4 cut(s)	333, 513, 1920, 2078
GsuI	CTGGAG	2 cut(s)	181, 555
HaeII	RGCGCY	2 cut(s)	16, 83
HaeIII	GGCC	4 cut(s)	1221, 1871, 2016, 2049
HapII	CCGG	5 cut(s)	102, 215, 318, 1630, 1804
HgaI	GACGC	2 cut(s)	100, 1157
HhaI	GCGC	3 cut(s)	15, 82, 201
Hin1II	CATG	6 cut(s)	78, 409, 725, 1415, 1493, 1870
Hin6I	GCGC	3 cut(s)	13, 80, 199
HinP1I	GCGC	3 cut(s)	13, 80, 199
HincII	GTYRAC	1 cut(s)	1165
HindII	GTYRAC	1 cut(s)	1165
HindIII	AAGCTT	1 cut(s)	873
HinfI	GANTC	9 cut(s)	174, 193, 239, 469, 679, 752, 1439, 1749, 1877
HpaI	GTTAAC	1 cut(s)	1165
HpaII	CCGG	5 cut(s)	102, 215, 318, 1630, 1804
HphI	GGTGA	8 cut(s)	49, 64, 106, 513, 860, 1766, 1827, 2006
Hpy166II	GTNNAC	5 cut(s)	1165, 1307, 1519, 1705, 2108
Hpy188III	TCNNGA	6 cut(s)	160, 584, 947, 1490, 1940, 1946
Hpy8I	GTNNAC	5 cut(s)	1165, 1307, 1519, 1705, 2108
Hpy99I	CGWCG	1 cut(s)	1941
HpyAV	CCTTC	9 cut(s)	34, 43, 545, 617, 686, 1172, 1343, 1556, 1982
HpyCH4III	ACNGT	8 cut(s)	289, 328, 649, 845, 939, 1116, 1676, 2032
HpyCH4IV	ACGT	1 cut(s)	90
HpyF10VI	GCNNNNNNNGC	6 cut(s)	41, 186, 338, 1074, 1148, 1919
HpyF3I	CTNAG	7 cut(s)	249, 447, 481, 1156, 1529, 1623, 2063
HpySE526I	ACGT	1 cut(s)	90
Hsp92II	CATG	6 cut(s)	78, 409, 725, 1415, 1493, 1870
HspAI	GCGC	3 cut(s)	13, 80, 199
Ksp22I	TGATCA	1 cut(s)	943
KspAI	GTTAAC	1 cut(s)	1165
Kzo9I	GATC	9 cut(s)	217, 231, 733, 828, 899, 943, 1858, 1942, 1996
LguI	GCTCTTC	1 cut(s)	543
LmnI	GCTCC	6 cut(s)	10, 20, 353, 605, 1397, 1729
Lsp1109I	GCAGC	4 cut(s)	344, 499, 1906, 2089
LweI	GCATC	3 cut(s)	410, 1012, 1258
MaeI	CTAG	3 cut(s)	803, 1593, 1985
MaeII	ACGT	1 cut(s)	90
MaeIII	GTNAC	6 cut(s)	112, 149, 283, 638, 649, 1362
MalI	GATC	9 cut(s)	219, 233, 735, 830, 901, 945, 1860, 1944, 1998
MboI	GATC	9 cut(s)	217, 231, 733, 828, 899, 943, 1858, 1942, 1996
MfeI	CAATTG	1 cut(s)	756
MflI	RGATCY	6 cut(s)	231, 733, 828, 899, 1858, 1942
MhlI	GDGCHC	3 cut(s)	482, 1309, 1521
MlsI	TGGCCA	1 cut(s)	2049
MluCI	AATT	9 cut(s)	500, 756, 1006, 1130, 1224, 1683, 1757, 1839, 1949
MluI	ACGCGT	1 cut(s)	1149
MluNI	TGGCCA	1 cut(s)	2049
MlyI	GAGTC	3 cut(s)	202, 248, 746
MmeI	TCCRAC	3 cut(s)	84, 1707, 1724
Mox20I	TGGCCA	1 cut(s)	2049
MscI	TGGCCA	1 cut(s)	2049
MseI	TTAA	6 cut(s)	141, 297, 308, 1164, 1478, 1973
MslI	CAYNNNNRTG	4 cut(s)	572, 846, 1317, 1410
Msp20I	TGGCCA	1 cut(s)	2049
MspA1I	CMGCKG	2 cut(s)	180, 335
MspI	CCGG	5 cut(s)	102, 215, 318, 1630, 1804
MspR9I	CCNGG	8 cut(s)	102, 281, 318, 525, 976, 1430, 2018, 2058
MunI	CAATTG	1 cut(s)	756
MvaI	CCWGG	6 cut(s)	281, 525, 976, 1430, 2018, 2058
MvnI	CGCG	2 cut(s)	68, 1151
MwoI	GCNNNNNNNGC	6 cut(s)	41, 186, 338, 1074, 1148, 1919
NciI	CCSGG	2 cut(s)	102, 318
NdeI	CATATG	1 cut(s)	739
NdeII	GATC	9 cut(s)	217, 231, 733, 828, 899, 943, 1858, 1942, 1996
NlaIII	CATG	6 cut(s)	78, 409, 725, 1415, 1493, 1870
NlaIV	GGNNCC	3 cut(s)	355, 830, 1860
NmuCI	GTSAC	2 cut(s)	112, 649
NspV	TTCGAA	1 cut(s)	538
OliI	CACNNNNGTG	2 cut(s)	572, 846
PagI	TCATGA	1 cut(s)	1489
PasI	CCCWGGG	1 cut(s)	975
PciSI	GCTCTTC	1 cut(s)	543
PfeI	GAWTC	6 cut(s)	174, 469, 679, 1439, 1749, 1877
PflFI	GACNNNGTC	1 cut(s)	110
PflMI	CCANNNNNTGG	1 cut(s)	1097
PinAI	ACCGGT	2 cut(s)	1629, 1803
PkrI	GCNGC	4 cut(s)	334, 514, 1921, 2079
PleI	GAGTC	3 cut(s)	201, 247, 746
PpsI	GAGTC	3 cut(s)	201, 247, 746
Ppu21I	YACGTR	1 cut(s)	91
PshAI	GACNNNNGTC	1 cut(s)	1677
PsiI	TTATAA	2 cut(s)	773, 879
Psp6I	CCWGG	6 cut(s)	279, 523, 974, 1428, 2016, 2056
PspGI	CCWGG	6 cut(s)	279, 523, 974, 1428, 2016, 2056
PspN4I	GGNNCC	3 cut(s)	355, 830, 1860
PspPI	GGNCC	1 cut(s)	1627
PstNI	CAGNNNCTG	2 cut(s)	159, 1271
PsuI	RGATCY	6 cut(s)	231, 733, 828, 899, 1858, 1942
PsyI	GACNNNGTC	1 cut(s)	110
PvuII	CAGCTG	1 cut(s)	335
RsaI	GTAC	7 cut(s)	313, 325, 369, 1039, 1379, 1706, 1983
RsaNI	GTAC	7 cut(s)	312, 324, 368, 1038, 1378, 1705, 1982
RseI	CAYNNNNRTG	4 cut(s)	572, 846, 1317, 1410
SapI	GCTCTTC	1 cut(s)	543
SaqAI	TTAA	6 cut(s)	141, 297, 308, 1164, 1478, 1973
SatI	GCNGC	4 cut(s)	333, 513, 1920, 2078
Sau3AI	GATC	9 cut(s)	217, 231, 733, 828, 899, 943, 1858, 1942, 1996
Sau96I	GGNCC	1 cut(s)	1627
ScaI	AGTACT	2 cut(s)	313, 1983
SchI	GAGTC	3 cut(s)	202, 248, 746
ScrFI	CCNGG	8 cut(s)	102, 281, 318, 525, 976, 1430, 2018, 2058
SduI	GDGCHC	3 cut(s)	482, 1309, 1521
SfaNI	GCATC	3 cut(s)	410, 1012, 1258
SfcI	CTRYAG	2 cut(s)	1279, 1901
SfuI	TTCGAA	1 cut(s)	538
SinI	GGWCC	1 cut(s)	1627
SmiMI	CAYNNNNRTG	4 cut(s)	572, 846, 1317, 1410
SmlI	CTYRAG	1 cut(s)	1260
SmoI	CTYRAG	1 cut(s)	1260
Sse9I	AATT	9 cut(s)	500, 756, 1006, 1130, 1224, 1683, 1757, 1839, 1949
SsiI	CCGC	6 cut(s)	35, 44, 66, 180, 189, 1577
SspMI	CTAG	3 cut(s)	803, 1593, 1985
StyD4I	CCNGG	8 cut(s)	100, 279, 316, 523, 974, 1428, 2016, 2056
StyI	CCWWGG	2 cut(s)	1032, 1395
TaaI	ACNGT	8 cut(s)	289, 328, 649, 845, 939, 1116, 1676, 2032
TaiI	ACGT	1 cut(s)	93
TaqI	TCGA	2 cut(s)	538, 1939
TaqII	GACCGA	1 cut(s)	1549
TasI	AATT	9 cut(s)	500, 756, 1006, 1130, 1224, 1683, 1757, 1839, 1949
TatI	WGTACW	3 cut(s)	311, 1377, 1981
TfiI	GAWTC	6 cut(s)	174, 469, 679, 1439, 1749, 1877
Tru1I	TTAA	6 cut(s)	141, 297, 308, 1164, 1478, 1973
Tru9I	TTAA	6 cut(s)	141, 297, 308, 1164, 1478, 1973
TscAI	CASTG	6 cut(s)	294, 579, 652, 850, 1627, 1681
TseFI	GTSAC	2 cut(s)	112, 649
TseI	GCWGC	4 cut(s)	332, 512, 1919, 2077
Tsp45I	GTSAC	2 cut(s)	112, 649
TspDTI	ATGAA	9 cut(s)	257, 452, 501, 575, 618, 756, 1187, 1478, 1506
TspGWI	ACGGA	1 cut(s)	1160
TspRI	CASTG	6 cut(s)	294, 579, 652, 850, 1627, 1681
Tth111I	GACNNNGTC	1 cut(s)	110
Van91I	CCANNNNNTGG	1 cut(s)	1097
VneI	GTGCAC	2 cut(s)	1305, 1517
VpaK11BI	GGWCC	1 cut(s)	1627
XapI	RAATTY	1 cut(s)	1949
XcmI	CCANNNNNNNNNTGG	1 cut(s)	67
XspI	CTAG	3 cut(s)	803, 1593, 1985
ZrmI	AGTACT	2 cut(s)	313, 1983

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.