Belongs to the argonaute family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Gly-rich_Ago1 | PF12764 | 101 - 199 | 1.2e-25 | Glycine-rich region of argonaut |
| ArgoN | PF16486 | 219 - 354 | 1.4e-37 | N-terminal domain of argonaute |
| ArgoL1 | PF08699 | 364 - 414 | 1.3e-21 | Argonaute linker 1 domain |
| PAZ | PF02170 | 420 - 546 | 3.4e-30 | PAZ domain |
| ArgoL2 | PF16488 | 556 - 602 | 7.6e-18 | Argonaute linker 2 domain |
| ArgoMid | PF16487 | 613 - 688 | 1.5e-09 | Mid domain of argonaute |
| Piwi | PF02171 | 705 - 1036 | 8e-110 | Piwi domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2114 |
| Acc16I | TGCGCA | 1 cut(s) | 1382 |
| Acc36I | ACCTGC | 3 cut(s) | 535, 990, 3244 |
| AccB1I | GGYRCC | 1 cut(s) | 98 |
| AccI | GTMKAC | 1 cut(s) | 848 |
| AccII | CGCG | 1 cut(s) | 3083 |
| AclI | AACGTT | 1 cut(s) | 2250 |
| AclWI | GGATC | 9 cut(s) | 133, 235, 711, 1712, 1910, 2174, 2187, 2513, 2526 |
| AcoI | YGGCCR | 2 cut(s) | 265, 2432 |
| AcsI | RAATTY | 3 cut(s) | 962, 1912, 2922 |
| AcuI | CTGAAG | 4 cut(s) | 504, 1025, 1734, 2619 |
| AdeI | CACNNNGTG | 3 cut(s) | 657, 752, 1142 |
| AflIII | ACRYGT | 2 cut(s) | 589, 2215 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1695 |
| AjiI | CACGTC | 1 cut(s) | 3158 |
| AjnI | CCWGG | 8 cut(s) | 394, 631, 1029, 1114, 1413, 2312, 2380, 2851 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 10, 42 |
| Alw21I | GWGCWC | 7 cut(s) | 187, 2032, 2470, 2490, 3151, 3197, 3205 |
| Alw26I | GTCTC | 6 cut(s) | 604, 777, 1001, 1615, 2168, 3110 |
| AlwI | GGATC | 9 cut(s) | 133, 235, 711, 1712, 1910, 2174, 2187, 2513, 2526 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1276 |
| Ama87I | CYCGRG | 1 cut(s) | 3198 |
| ApeKI | GCWGC | 7 cut(s) | 71, 427, 479, 968, 2408, 2910, 3218 |
| ApoI | RAATTY | 3 cut(s) | 962, 1912, 2922 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1479 |
| AspLEI | GCGC | 4 cut(s) | 1383, 1659, 2360, 2726 |
| AspS9I | GGNCC | 9 cut(s) | 107, 305, 338, 386, 401, 857, 1036, 2671, 3209 |
| AsuC2I | CCSGG | 3 cut(s) | 931, 2094, 3207 |
| AsuHPI | GGTGA | 7 cut(s) | 16, 405, 457, 1154, 1657, 2165, 2873 |
| AvaI | CYCGRG | 1 cut(s) | 3198 |
| AvaII | GGWCC | 4 cut(s) | 107, 386, 857, 3209 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2847, 2880 |
| BamHI | GGATCC | 1 cut(s) | 2518 |
| BanI | GGYRCC | 1 cut(s) | 98 |
| BanII | GRGCYC | 3 cut(s) | 187, 2010, 2490 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 214, 246 |
| BauI | CACGAG | 1 cut(s) | 972 |
| BbsI | GAAGAC | 2 cut(s) | 1135, 1520 |
| Bbv12I | GWGCWC | 7 cut(s) | 187, 2032, 2470, 2490, 3151, 3197, 3205 |
| BbvCI | CCTCAGC | 2 cut(s) | 345, 471 |
| BbvI | GCAGC | 7 cut(s) | 58, 414, 466, 955, 2420, 2922, 3205 |
| BccI | CCATC | 8 cut(s) | 412, 560, 810, 824, 2407, 2484, 2651, 2817 |
| BceAI | ACGGC | 1 cut(s) | 252 |
| BciT130I | CCWGG | 8 cut(s) | 396, 633, 1031, 1116, 1415, 2314, 2382, 2853 |
| BciVI | GTATCC | 1 cut(s) | 2203 |
| BclI | TGATCA | 1 cut(s) | 2038 |
| BcnI | CCSGG | 3 cut(s) | 931, 2094, 3207 |
| BcoDI | GTCTC | 6 cut(s) | 604, 777, 1001, 1615, 2168, 3110 |
| BfaI | CTAG | 7 cut(s) | 30, 573, 603, 779, 1080, 2627, 3277 |
| BfmI | CTRYAG | 2 cut(s) | 2614, 2908 |
| BfoI | RGCGCY | 2 cut(s) | 1660, 2361 |
| BfuAI | ACCTGC | 3 cut(s) | 535, 990, 3244 |
| BfuI | GTATCC | 1 cut(s) | 2203 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 273 |
| BmcAI | AGTACT | 1 cut(s) | 2295 |
| Bme18I | GGWCC | 4 cut(s) | 107, 386, 857, 3209 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1695 |
| BmeT110I | CYCGRG | 1 cut(s) | 3198 |
| BmgBI | CACGTC | 1 cut(s) | 3158 |
| BmgT120I | GGNCC | 9 cut(s) | 107, 305, 338, 386, 401, 857, 1036, 2671, 3209 |
| BmiI | GGNNCC | 8 cut(s) | 58, 100, 109, 620, 2520, 2736, 3111, 3210 |
| BmrI | ACTGGG | 2 cut(s) | 437, 2191 |
| BmsI | GCATC | 7 cut(s) | 1012, 2065, 2293, 2380, 2613, 2695, 2977 |
| BmuI | ACTGGG | 2 cut(s) | 437, 2191 |
| BpiI | GAAGAC | 2 cut(s) | 1135, 1520 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 607, 639 |
| BpmI | CTGGAG | 2 cut(s) | 2296, 2753 |
| Bpu10I | CCTNAGC | 5 cut(s) | 345, 471, 513, 1764, 2004 |
| BpuEI | CTTGAG | 4 cut(s) | 1625, 1647, 2409, 2454 |
| BpuMI | CCSGG | 3 cut(s) | 931, 2094, 3207 |
| BsaAI | YACGTR | 1 cut(s) | 1343 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1314 |
| BsaI | GGTCTC | 2 cut(s) | 1001, 3110 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 782, 812, 1338, 1368, 1875, 1905 |
| Bse118I | RCCGGY | 1 cut(s) | 813 |
| Bse3DI | GCAATG | 3 cut(s) | 1244, 2085, 2827 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1314 |
| BseBI | CCWGG | 8 cut(s) | 396, 633, 1031, 1116, 1415, 2314, 2382, 2853 |
| BseJI | GATNNNNATC | 1 cut(s) | 1314 |
| BseMI | GCAATG | 3 cut(s) | 1244, 2085, 2827 |
| BseRI | GAGGAG | 4 cut(s) | 28, 333, 375, 923 |
| BseXI | GCAGC | 7 cut(s) | 58, 414, 466, 955, 2420, 2922, 3205 |
| BseYI | CCCAGC | 3 cut(s) | 60, 1269, 2941 |
| BsgI | GTGCAG | 4 cut(s) | 413, 692, 968, 3222 |
| Bsh1236I | CGCG | 1 cut(s) | 3083 |
| Bsh1285I | CGRYCG | 3 cut(s) | 379, 2338, 2862 |
| BshNI | GGYRCC | 1 cut(s) | 98 |
| BsiEI | CGRYCG | 3 cut(s) | 379, 2338, 2862 |
| BsiHKAI | GWGCWC | 7 cut(s) | 187, 2032, 2470, 2490, 3151, 3197, 3205 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3198 |
| BsiSI | CCGG | 6 cut(s) | 102, 814, 931, 2093, 2435, 3206 |
| BslFI | GGGAC | 6 cut(s) | 51, 93, 927, 1605, 2295, 2545 |
| BsmAI | GTCTC | 6 cut(s) | 604, 777, 1001, 1615, 2168, 3110 |
| BsmBI | CGTCTC | 1 cut(s) | 2168 |
| BsmFI | GGGAC | 6 cut(s) | 51, 93, 927, 1605, 2295, 2545 |
| Bso31I | GGTCTC | 2 cut(s) | 1001, 3110 |
| BsoBI | CYCGRG | 1 cut(s) | 3198 |
| Bsp1286I | GDGCHC | 8 cut(s) | 187, 2010, 2032, 2470, 2490, 3151, 3197, 3205 |
| Bsp1407I | TGTACA | 2 cut(s) | 659, 3035 |
| Bsp19I | CCATGG | 2 cut(s) | 1566, 1793 |
| BspFNI | CGCG | 1 cut(s) | 3083 |
| BspHI | TCATGA | 1 cut(s) | 1483 |
| BspLI | GGNNCC | 8 cut(s) | 58, 100, 109, 620, 2520, 2736, 3111, 3210 |
| BspMAI | CTGCAG | 1 cut(s) | 2912 |
| BspMI | ACCTGC | 3 cut(s) | 535, 990, 3244 |
| BspPI | GGATC | 9 cut(s) | 133, 235, 711, 1712, 1910, 2174, 2187, 2513, 2526 |
| BspQI | GCTCTTC | 1 cut(s) | 833 |
| BspT107I | GGYRCC | 1 cut(s) | 98 |
| BspTNI | GGTCTC | 2 cut(s) | 1001, 3110 |
| BsrDI | GCAATG | 3 cut(s) | 1244, 2085, 2827 |
| BsrFI | RCCGGY | 1 cut(s) | 813 |
| BsrGI | TGTACA | 2 cut(s) | 659, 3035 |
| BssAI | RCCGGY | 1 cut(s) | 813 |
| BssNAI | GTATAC | 1 cut(s) | 849 |
| BssSI | CACGAG | 1 cut(s) | 972 |
| BssT1I | CCWWGG | 5 cut(s) | 112, 214, 1566, 1793, 2325 |
| Bst1107I | GTATAC | 1 cut(s) | 849 |
| Bst2BI | CACGAG | 1 cut(s) | 972 |
| Bst2UI | CCWGG | 8 cut(s) | 396, 633, 1031, 1116, 1415, 2314, 2382, 2853 |
| Bst6I | CTCTTC | 6 cut(s) | 5, 217, 630, 833, 867, 900 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2252, 3071 |
| BstAUI | TGTACA | 2 cut(s) | 659, 3035 |
| BstBAI | YACGTR | 1 cut(s) | 1343 |
| BstC8I | GCNNGC | 5 cut(s) | 477, 815, 1160, 1835, 2722 |
| BstDSI | CCRYGG | 3 cut(s) | 268, 1566, 1793 |
| BstEII | GGTNACC | 3 cut(s) | 155, 209, 1645 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 348, 2379 |
| BstFNI | CGCG | 1 cut(s) | 3083 |
| BstH2I | RGCGCY | 2 cut(s) | 1660, 2361 |
| BstHHI | GCGC | 4 cut(s) | 1383, 1659, 2360, 2726 |
| BstMAI | GTCTC | 6 cut(s) | 604, 777, 1001, 1615, 2168, 3110 |
| BstMCI | CGRYCG | 3 cut(s) | 379, 2338, 2862 |
| BstNI | CCWGG | 8 cut(s) | 396, 633, 1031, 1116, 1415, 2314, 2382, 2853 |
| BstNSI | RCATGY | 1 cut(s) | 2219 |
| BstPI | GGTNACC | 3 cut(s) | 155, 209, 1645 |
| BstSFI | CTRYAG | 2 cut(s) | 2614, 2908 |
| BstUI | CGCG | 1 cut(s) | 3083 |
| BstV1I | GCAGC | 7 cut(s) | 58, 414, 466, 955, 2420, 2922, 3205 |
| BstV2I | GAAGAC | 2 cut(s) | 1135, 1520 |
| BstX2I | RGATCY | 8 cut(s) | 125, 227, 703, 1717, 1902, 2166, 2179, 2518 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1814 |
| BstYI | RGATCY | 8 cut(s) | 125, 227, 703, 1717, 1902, 2166, 2179, 2518 |
| BstZ17I | GTATAC | 1 cut(s) | 849 |
| BsuI | GTATCC | 1 cut(s) | 2203 |
| BtgI | CCRYGG | 3 cut(s) | 268, 1566, 1793 |
| BtrI | CACGTC | 1 cut(s) | 3158 |
| BtsIMutI | CAGTG | 8 cut(s) | 376, 1856, 1942, 2032, 2204, 2516, 2729, 3239 |
| BveI | ACCTGC | 3 cut(s) | 535, 990, 3244 |
| Cac8I | GCNNGC | 5 cut(s) | 477, 815, 1160, 1835, 2722 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1276 |
| CciI | TCATGA | 1 cut(s) | 1483 |
| CfoI | GCGC | 4 cut(s) | 1383, 1659, 2360, 2726 |
| Cfr10I | RCCGGY | 1 cut(s) | 813 |
| Cfr13I | GGNCC | 9 cut(s) | 107, 305, 338, 386, 401, 857, 1036, 2671, 3209 |
| CseI | GACGC | 3 cut(s) | 53, 2377, 2768 |
| CsiI | ACCWGGT | 1 cut(s) | 2851 |
| DraI | TTTAAA | 3 cut(s) | 1209, 2160, 2506 |
| DraIII | CACNNNGTG | 3 cut(s) | 657, 752, 1142 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2114 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1695 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2114 |
| EaeI | YGGCCR | 2 cut(s) | 265, 2432 |
| Eam1104I | CTCTTC | 6 cut(s) | 5, 217, 630, 833, 867, 900 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1695 |
| EarI | CTCTTC | 6 cut(s) | 5, 217, 630, 833, 867, 900 |
| EciI | GGCGGA | 2 cut(s) | 120, 177 |
| Ecl136II | GAGCTC | 2 cut(s) | 185, 2488 |
| Eco130I | CCWWGG | 5 cut(s) | 112, 214, 1566, 1793, 2325 |
| Eco147I | AGGCCT | 2 cut(s) | 2720, 3229 |
| Eco24I | GRGCYC | 3 cut(s) | 187, 2010, 2490 |
| Eco31I | GGTCTC | 2 cut(s) | 1001, 3110 |
| Eco47I | GGWCC | 4 cut(s) | 107, 386, 857, 3209 |
| Eco53kI | GAGCTC | 2 cut(s) | 185, 2488 |
| Eco57I | CTGAAG | 4 cut(s) | 504, 1025, 1734, 2619 |
| Eco88I | CYCGRG | 1 cut(s) | 3198 |
| Eco91I | GGTNACC | 3 cut(s) | 155, 209, 1645 |
| EcoICRI | GAGCTC | 2 cut(s) | 185, 2488 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 348, 2379 |
| EcoO109I | RGGNCCY | 4 cut(s) | 107, 338, 386, 1036 |
| EcoO65I | GGTNACC | 3 cut(s) | 155, 209, 1645 |
| EcoRI | GAATTC | 1 cut(s) | 2922 |
| EcoRII | CCWGG | 8 cut(s) | 394, 631, 1029, 1114, 1413, 2312, 2380, 2851 |
| EcoT14I | CCWWGG | 5 cut(s) | 112, 214, 1566, 1793, 2325 |
| EcoT38I | GRGCYC | 3 cut(s) | 187, 2010, 2490 |
| ErhI | CCWWGG | 5 cut(s) | 112, 214, 1566, 1793, 2325 |
| Esp3I | CGTCTC | 1 cut(s) | 2168 |
| FaqI | GGGAC | 6 cut(s) | 51, 93, 927, 1605, 2295, 2545 |
| FauI | CCCGC | 2 cut(s) | 76, 1928 |
| FauNDI | CATATG | 1 cut(s) | 3025 |
| FbaI | TGATCA | 1 cut(s) | 2038 |
| FblI | GTMKAC | 1 cut(s) | 848 |
| FriOI | GRGCYC | 3 cut(s) | 187, 2010, 2490 |
| FspBI | CTAG | 7 cut(s) | 30, 573, 603, 779, 1080, 2627, 3277 |
| FspI | TGCGCA | 1 cut(s) | 1382 |
| GlaI | GCGC | 4 cut(s) | 1382, 1658, 2359, 2725 |
| GsaI | CCCAGC | 3 cut(s) | 64, 1273, 2945 |
| GsuI | CTGGAG | 2 cut(s) | 2296, 2753 |
| HaeII | RGCGCY | 2 cut(s) | 1660, 2361 |
| HapII | CCGG | 6 cut(s) | 102, 814, 931, 2093, 2435, 3206 |
| HgaI | GACGC | 3 cut(s) | 53, 2377, 2768 |
| HhaI | GCGC | 4 cut(s) | 1383, 1659, 2360, 2726 |
| Hin6I | GCGC | 4 cut(s) | 1381, 1657, 2358, 2724 |
| HinP1I | GCGC | 4 cut(s) | 1381, 1657, 2358, 2724 |
| HinfI | GANTC | 9 cut(s) | 50, 462, 797, 1279, 1310, 1756, 2089, 2390, 2867 |
| HpaII | CCGG | 6 cut(s) | 102, 814, 931, 2093, 2435, 3206 |
| HphI | GGTGA | 7 cut(s) | 16, 405, 457, 1154, 1657, 2165, 2873 |
| Hpy166II | GTNNAC | 9 cut(s) | 660, 757, 849, 1444, 2234, 2866, 2979, 3036, 3038 |
| Hpy8I | GTNNAC | 9 cut(s) | 660, 757, 849, 1444, 2234, 2866, 2979, 3036, 3038 |
| Hpy99I | CGWCG | 1 cut(s) | 2656 |
| HpyCH4IV | ACGT | 6 cut(s) | 591, 1342, 1696, 1926, 2250, 3157 |
| HpySE526I | ACGT | 6 cut(s) | 591, 1342, 1696, 1926, 2250, 3157 |
| HspAI | GCGC | 4 cut(s) | 1381, 1657, 2358, 2724 |
| KroI | GCCGGC | 1 cut(s) | 813 |
| KroNI | GCCGGC | 1 cut(s) | 815 |
| Ksp22I | TGATCA | 1 cut(s) | 2038 |
| LguI | GCTCTTC | 1 cut(s) | 833 |
| Lsp1109I | GCAGC | 7 cut(s) | 58, 414, 466, 955, 2420, 2922, 3205 |
| LweI | GCATC | 7 cut(s) | 1012, 2065, 2293, 2380, 2613, 2695, 2977 |
| MabI | ACCWGGT | 1 cut(s) | 2851 |
| MaeI | CTAG | 7 cut(s) | 30, 573, 603, 779, 1080, 2627, 3277 |
| MaeII | ACGT | 6 cut(s) | 591, 1342, 1696, 1926, 2250, 3157 |
| MfeI | CAATTG | 3 cut(s) | 1897, 2403, 2826 |
| MflI | RGATCY | 8 cut(s) | 125, 227, 703, 1717, 1902, 2166, 2179, 2518 |
| MhlI | GDGCHC | 8 cut(s) | 187, 2010, 2032, 2470, 2490, 3151, 3197, 3205 |
| MlyI | GAGTC | 3 cut(s) | 59, 791, 2861 |
| MmeI | TCCRAC | 5 cut(s) | 305, 1211, 1516, 1825, 2675 |
| MroNI | GCCGGC | 1 cut(s) | 813 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1479 |
| MslI | CAYNNNNRTG | 3 cut(s) | 714, 2952, 3156 |
| MspA1I | CMGCKG | 2 cut(s) | 71, 2411 |
| MspI | CCGG | 6 cut(s) | 102, 814, 931, 2093, 2435, 3206 |
| MssI | GTTTAAAC | 1 cut(s) | 2506 |
| MunI | CAATTG | 3 cut(s) | 1897, 2403, 2826 |
| MvaI | CCWGG | 8 cut(s) | 396, 633, 1031, 1116, 1415, 2314, 2382, 2853 |
| MvnI | CGCG | 1 cut(s) | 3083 |
| NaeI | GCCGGC | 1 cut(s) | 815 |
| NciI | CCSGG | 3 cut(s) | 931, 2094, 3207 |
| NcoI | CCATGG | 2 cut(s) | 1566, 1793 |
| NdeI | CATATG | 1 cut(s) | 3025 |
| NgoMIV | GCCGGC | 1 cut(s) | 813 |
| NlaIV | GGNNCC | 8 cut(s) | 58, 100, 109, 620, 2520, 2736, 3111, 3210 |
| NmeAIII | GCCGAG | 1 cut(s) | 383 |
| NmuCI | GTSAC | 6 cut(s) | 739, 1645, 1976, 2365, 2755, 2879 |
| NsbI | TGCGCA | 1 cut(s) | 1382 |
| NspI | RCATGY | 1 cut(s) | 2219 |
| PaeR7I | CTCGAG | 1 cut(s) | 3198 |
| PagI | TCATGA | 1 cut(s) | 1483 |
| PceI | AGGCCT | 2 cut(s) | 2720, 3229 |
| PciI | ACATGT | 1 cut(s) | 2215 |
| PciSI | GCTCTTC | 1 cut(s) | 833 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3196 |
| PdiI | GCCGGC | 1 cut(s) | 815 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1479 |
| PfeI | GAWTC | 6 cut(s) | 462, 1279, 1310, 1756, 2089, 2390 |
| PflFI | GACNNNGTC | 1 cut(s) | 2536 |
| PleI | GAGTC | 3 cut(s) | 58, 791, 2861 |
| PmeI | GTTTAAAC | 1 cut(s) | 2506 |
| PpsI | GAGTC | 3 cut(s) | 58, 791, 2861 |
| Ppu21I | YACGTR | 1 cut(s) | 1343 |
| PpuMI | RGGWCCY | 2 cut(s) | 107, 386 |
| PscI | ACATGT | 1 cut(s) | 2215 |
| Psp124BI | GAGCTC | 2 cut(s) | 187, 2490 |
| Psp1406I | AACGTT | 1 cut(s) | 2250 |
| Psp5II | RGGWCCY | 2 cut(s) | 107, 386 |
| Psp6I | CCWGG | 8 cut(s) | 394, 631, 1029, 1114, 1413, 2312, 2380, 2851 |
| PspEI | GGTNACC | 3 cut(s) | 155, 209, 1645 |
| PspFI | CCCAGC | 3 cut(s) | 60, 1269, 2941 |
| PspGI | CCWGG | 8 cut(s) | 394, 631, 1029, 1114, 1413, 2312, 2380, 2851 |
| PspN4I | GGNNCC | 8 cut(s) | 58, 100, 109, 620, 2520, 2736, 3111, 3210 |
| PspPI | GGNCC | 9 cut(s) | 107, 305, 338, 386, 401, 857, 1036, 2671, 3209 |
| PspPPI | RGGWCCY | 2 cut(s) | 107, 386 |
| PspXI | VCTCGAGB | 1 cut(s) | 3198 |
| PstI | CTGCAG | 1 cut(s) | 2912 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1276 |
| PsuI | RGATCY | 8 cut(s) | 125, 227, 703, 1717, 1902, 2166, 2179, 2518 |
| PsyI | GACNNNGTC | 1 cut(s) | 2536 |
| PvuII | CAGCTG | 1 cut(s) | 2411 |
| RseI | CAYNNNNRTG | 3 cut(s) | 714, 2952, 3156 |
| SacI | GAGCTC | 2 cut(s) | 187, 2490 |
| SapI | GCTCTTC | 1 cut(s) | 833 |
| Sau96I | GGNCC | 9 cut(s) | 107, 305, 338, 386, 401, 857, 1036, 2671, 3209 |
| ScaI | AGTACT | 1 cut(s) | 2295 |
| SchI | GAGTC | 3 cut(s) | 59, 791, 2861 |
| SduI | GDGCHC | 8 cut(s) | 187, 2010, 2032, 2470, 2490, 3151, 3197, 3205 |
| SexAI | ACCWGGT | 1 cut(s) | 2851 |
| SfaNI | GCATC | 7 cut(s) | 1012, 2065, 2293, 2380, 2613, 2695, 2977 |
| SfcI | CTRYAG | 2 cut(s) | 2614, 2908 |
| Sfr274I | CTCGAG | 1 cut(s) | 3198 |
| SinI | GGWCC | 4 cut(s) | 107, 386, 857, 3209 |
| SlaI | CTCGAG | 1 cut(s) | 3198 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 714, 2952, 3156 |
| SmlI | CTYRAG | 5 cut(s) | 1640, 1662, 2424, 2469, 3198 |
| SmoI | CTYRAG | 5 cut(s) | 1640, 1662, 2424, 2469, 3198 |
| SseBI | AGGCCT | 2 cut(s) | 2720, 3229 |
| SspI | AATATT | 1 cut(s) | 1213 |
| SspMI | CTAG | 7 cut(s) | 30, 573, 603, 779, 1080, 2627, 3277 |
| SstI | GAGCTC | 2 cut(s) | 187, 2490 |
| StuI | AGGCCT | 2 cut(s) | 2720, 3229 |
| StyI | CCWWGG | 5 cut(s) | 112, 214, 1566, 1793, 2325 |
| TaiI | ACGT | 6 cut(s) | 594, 1345, 1699, 1929, 2253, 3160 |
| TaqI | TCGA | 4 cut(s) | 1226, 2032, 2065, 3199 |
| TatI | WGTACW | 3 cut(s) | 659, 2293, 3035 |
| TauI | GCSGC | 3 cut(s) | 306, 2940, 3086 |
| TfiI | GAWTC | 6 cut(s) | 462, 1279, 1310, 1756, 2089, 2390 |
| TscAI | CASTG | 8 cut(s) | 376, 1856, 1942, 2032, 2204, 2516, 2736, 3246 |
| TseFI | GTSAC | 6 cut(s) | 739, 1645, 1976, 2365, 2755, 2879 |
| TseI | GCWGC | 7 cut(s) | 71, 427, 479, 968, 2408, 2910, 3218 |
| Tsp45I | GTSAC | 6 cut(s) | 739, 1645, 1976, 2365, 2755, 2879 |
| TspDTI | ATGAA | 9 cut(s) | 486, 1092, 1472, 1475, 1500, 1877, 1974, 2712, 2982 |
| TspGWI | ACGGA | 5 cut(s) | 850, 2192, 2299, 2669, 3205 |
| TspRI | CASTG | 8 cut(s) | 376, 1856, 1942, 2032, 2204, 2516, 2736, 3246 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2536 |
| VpaK11BI | GGWCC | 4 cut(s) | 107, 386, 857, 3209 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 348, 2379 |
| XapI | RAATTY | 3 cut(s) | 962, 1912, 2922 |
| XceI | RCATGY | 1 cut(s) | 2219 |
| XhoI | CTCGAG | 1 cut(s) | 3198 |
| XmiI | GTMKAC | 1 cut(s) | 848 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1479 |
| XspI | CTAG | 7 cut(s) | 30, 573, 603, 779, 1080, 2627, 3277 |
| ZrmI | AGTACT | 1 cut(s) | 2295 |