Rh7DG005300

Belongs to the argonaute family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
464816 .. 471909
7094 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG005300.1

Sequence Viewer

Length: 2907 bp
ATGGTGAGGAAGAGGAGAACTGAGCTTCCTAGCGGAAGTGAAAGCTCTGAGTCTGGTTCCCAGCGTCCCGCTGCTCCACCAGCACAACAACAACAAGGTGCCGGAGGTCCCCAAGGGGGAAGGGGATCTCCGCCTCAACAACAGGGTGGAAGGGGAGCTCCGCCTCAACAACAGGGTGGAGGTTACCAAGGTGGAAGAGGATCTACTCCACAGGGAGGGCGTGGGGGTTATGGTGGTGGCCGTGGAGGCTATCCAACGCCACAACAGCAGTATGGCGGCCCTCCTGAATATCAAGGCAGAGGCAGGGGAGGGCCTCCTCAGCAAGGAGGCCGAGGAGGGTACAGTGGCGGTCGTGGAGGACCTTCTCCTGGTGGCCCATCCAGATCACCAGTTTCCGAGCTGCACCAAGCAACCCCAGTTCCTTATCAAGCTGGAATCACCCCTCAGCCTGCTTATCAAGCAAGTTCATCATCTCATCCACCTGAGCCTTCAGAAGTGGCAGAGCAGTTTCAGCAGGTTTCCATCCAGCAAGAGGAAGCTCCTAGTCAGGCCATTCAACGCGTTCCAGTCTCTAGCAAGGGTATGAGGTTCCCTCTTCGCCCTGGTAAGGGTAAGACTGGCACAAGGTGTACAGTCAAGGCAAATCATTTCTTTGCTGAATTACCAGACAAGGATCTGCACCAATATGATGTAACTATTACACCAGAAGTCACATCACGGGGTGTGAACCGTGCTGTGATGTCTCAGCTAGTGAAAACCTACAAGGACTCCCATCTTTCAAGCCGGCTTCCTGCTTATGATGGACGGAAGAGCCTGTATACTGCTGGACCTCTTCCTTTCCAGTCGAAGGAGTTCAAAATCACTCTTCTAGATGATGAGGAGGGACAGGCTGGACAAGCCCGGCGAGAGAGAGATTTCAGAGTTGTGATTAAATTTGCTGCTCGTGCTGACCTGCACCATTTAGGTCTCTTTTTGCAAGGGAGGATAGCTGATGCACCCCAGGAGGCCCTTCAGGTTCTTGACATTGTTCTAAGGGAGTTGCCTACTTCTAGGTACTGTCCTGTGGGGCGTTCATTTTACAACCCTGGCTTGGGGAGAAGACAACCACTTGGTGAGGGTTTGGAAAGCTGGCGTGGTTTCTACCAGAGTATTCGTCCAACTCAAATGGGTCTATCTTTAAATATTGATATGTCCTCGACAGCTTTTATTGAGCCATTGCCTGTTATTGAGTTTGTAACCCAGCTACTGAATCGTGATGTTCAAGCGAGGCCACTTTCTGATTCTGATCGTGTAAAGATTAAAAAGGCTCTACGTGGAGTGAGGGTTGAAGTTACACACCGAGGAAATATGCGCAGAAAATACCGTATCTCTGGTTTAACGTCCCAGGCAACTAGAGAATTAACTTTTCCTGTGGACGAAAGAGGAACGATGAAATCGGTTGTTGAATACTTTCATGAAACCTACGGTTTTGCCATTCAACATCCATATTGGCCTTGTCTTCAAGTTGGAAATCAACAGCGACCAAACTATTTACCCATGGAGGTCTGTAAAATTGTTGAGGGACAAAGGTACTCCAAGAGATTGAATGAGAGACAGATAACTGCTTTGCTCAAGGTGACCTGTCAGCGCCCTCAAGAAAGGGAGCGTGATATTATGCAGACAGTACGTCATAATGCCTATGCTGAAGATCCTTATGCACAGGAGTTCGGAATTAAAATTAGTGAGAATCTGGCTCAGGTTGAAGCTCGTATTCTTCCTCCACCATGGCTTAAATACCATGATACTGGAAGGGAAAAGGATTGTCTGCCCCAAGTTGGACAGTGGAATATGATGAATAAGAAAATGGTAAATGGAGGAAAAGTAACCAATTGGATCTGCATAAATTTTTCCCGCAACGTACAAGACAGTGTGGCAAAAGGATTTTGTTATGAACTTGCTCAGATGTGTCACATTTCTGGCATGGCATTTAACCCTGAGCCCGTGCTTCCACCAGTCAGTGCTCGACCTGATCAGGTGGAAAAGGTCTTAAAAACTCGATACCATGATGCAATGACTAAGATTCCGGGCAAGGAGCTTGACCTTCTTGTCGTCATTTTGCCAGATAATAATGGCTCTCTTTATGGTGATTTAAAAAGGATCTGTGAGACGGATCTTGGCCTTGTATCCCAGTGCTGTTTAACTAAACATGTGTTTAGAATGAGTAAACAGTATTTGGCAAACGTTGCCTTGAAGATAAATGTGAAGGTCGGGGGACGGAACACAGTACTTGTTGATGCAATCTCCAGGCGTATTCCCTTGGTCAGCGACCGTCCTACAATAATTTTTGGCGCTGATGTGACGCATCCTCATCCAGGGGAGGATTCAAGCCCATCAATTGCAGCTGTTGTGGCTTCTCAAGACTGGCCGGAAATTACCAAGTATGCTGGTTTAGTATGTGCTCAAGCCCATCGTCAGGAGCTTATCCAAGATTTGTTTAAACAGTGGCAGGATCCAGTAAAAGGGACAATGTCTGGTGGAATGATAAAGGAACTGCTTATTTCCTTTCGTAGAGCAACAGGGCAGAAGCCTCAACGCATCATTTTCTACAGGGATGGTGTCAGTGAGGGCCAATTCTACCAAGTTCTATTGTATGAACTTGATGCAATTCGTAAGGCCTGCGCTTCACTGGAGCCAAATTATCAGCCTCCCGTGACTTTTGTTGTTGTTCAAAAGCGTCATCATACAAGATTGTTTGCCGACAACCATCGTGATCGCAATGCAATTGACAGGAGTGGGAACATATTACCTGGTACGGTTGTGGACTCCAAAATCTGTCACCCAACTGAGTTTGACTTCTACCTCTGCAGCCATGCAGGAATTCAGGCAAGAATCATTTCCTTTGTGTTTATGTGTTTGTGTGGTATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

968

Amino Acids

107.48

Weight (kDa)

9.41

Isoelectric Point (pI)

52.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Gly-rich_Ago1 PF12764 92 - 189 2.2e-24 Glycine-rich region of argonaut
ArgoN PF16486 209 - 344 1.2e-37 N-terminal domain of argonaute
ArgoL1 PF08699 354 - 404 1.8e-21 Argonaute linker 1 domain
PAZ PF02170 410 - 536 2.8e-30 PAZ domain
ArgoL2 PF16488 546 - 592 6.6e-18 Argonaute linker 2 domain
ArgoMid PF16487 603 - 678 1.3e-09 Mid domain of argonaute
Piwi PF02171 695 - 954 7e-85 Piwi domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2084
Acc16I TGCGCA 1 cut(s) 1352
Acc36I ACCTGC 2 cut(s) 505, 960
AccB1I GGYRCC 1 cut(s) 98
AccI GTMKAC 1 cut(s) 818
AccII CGCG 1 cut(s) 561
AciI CCGC 7 cut(s) 33, 69, 131, 161, 276, 348, 1891
AclI AACGTT 1 cut(s) 2220
AclWI GGATC 9 cut(s) 133, 208, 681, 1682, 1880, 2144, 2157, 2483, 2496
AcoI YGGCCR 2 cut(s) 238, 2402
AcsI RAATTY 3 cut(s) 932, 1882, 2856
AcuI CTGAAG 3 cut(s) 474, 995, 1704
AdeI CACNNNGTG 3 cut(s) 627, 722, 1112
AfaI GTAC 8 cut(s) 341, 631, 1055, 1571, 1665, 1899, 2265, 2791
AflIII ACRYGT 2 cut(s) 559, 2185
AhdI GACNNNNNGTC 1 cut(s) 1665
AjnI CCWGG 8 cut(s) 367, 601, 999, 1084, 1383, 2282, 2350, 2785
AloI GAACNNNNNNTCC 2 cut(s) 10, 42
Alw21I GWGCWC 3 cut(s) 160, 2002, 2440
Alw26I GTCTC 5 cut(s) 574, 747, 971, 1585, 2138
AlwI GGATC 9 cut(s) 133, 208, 681, 1682, 1880, 2144, 2157, 2483, 2496
AlwNI CAGNNNCTG 1 cut(s) 1246
ApeKI GCWGC 5 cut(s) 71, 400, 938, 2378, 2844
ApoI RAATTY 3 cut(s) 932, 1882, 2856
Asp700I GAANNNNTTC 3 cut(s) 851, 1449, 2872
AspLEI GCGC 4 cut(s) 1353, 1629, 2330, 2660
AspS9I GGNCC 8 cut(s) 107, 278, 311, 359, 374, 827, 1006, 2605
AsuC2I CCSGG 2 cut(s) 901, 2064
AsuHPI GGTGA 7 cut(s) 16, 378, 430, 1124, 1627, 2135, 2807
AvaII GGWCC 3 cut(s) 107, 359, 827
BaeI ACNNNNGTAYC 2 cut(s) 2781, 2814
BamHI GGATCC 1 cut(s) 2488
BanI GGYRCC 1 cut(s) 98
BanII GRGCYC 2 cut(s) 160, 1980
BarI GAAGNNNNNNTAC 2 cut(s) 187, 219
BauI CACGAG 1 cut(s) 942
BbsI GAAGAC 2 cut(s) 1105, 1490
Bbv12I GWGCWC 3 cut(s) 160, 2002, 2440
BbvCI CCTCAGC 2 cut(s) 318, 444
BbvI GCAGC 5 cut(s) 58, 387, 925, 2390, 2856
BccI CCATC 8 cut(s) 385, 530, 780, 794, 2377, 2454, 2585, 2751
BceAI ACGGC 1 cut(s) 225
BciT130I CCWGG 8 cut(s) 369, 603, 1001, 1086, 1385, 2284, 2352, 2787
BciVI GTATCC 1 cut(s) 2173
BclI TGATCA 1 cut(s) 2008
BcnI CCSGG 2 cut(s) 901, 2064
BcoDI GTCTC 5 cut(s) 574, 747, 971, 1585, 2138
BfaI CTAG 7 cut(s) 30, 543, 573, 749, 869, 1050, 1392
BfmI CTRYAG 2 cut(s) 2584, 2842
BfoI RGCGCY 2 cut(s) 1630, 2331
BfuAI ACCTGC 2 cut(s) 505, 960
BfuI GTATCC 1 cut(s) 2173
BglI GCCNNNNNGGC 1 cut(s) 246
BisI GCNGC 6 cut(s) 72, 277, 401, 939, 2379, 2845
BlsI GCNGC 6 cut(s) 73, 278, 402, 940, 2380, 2846
BmcAI AGTACT 1 cut(s) 2265
Bme18I GGWCC 3 cut(s) 107, 359, 827
BmeRI GACNNNNNGTC 1 cut(s) 1665
BmgT120I GGNCC 8 cut(s) 107, 278, 311, 359, 374, 827, 1006, 2605
BmiI GGNNCC 6 cut(s) 58, 100, 109, 590, 2490, 2670
BmrI ACTGGG 2 cut(s) 410, 2161
BmsI GCATC 6 cut(s) 982, 2035, 2263, 2350, 2583, 2629
BmuI ACTGGG 2 cut(s) 410, 2161
BpiI GAAGAC 2 cut(s) 1105, 1490
BplI GAGNNNNNCTC 2 cut(s) 577, 609
BpmI CTGGAG 2 cut(s) 2266, 2687
Bpu10I CCTNAGC 5 cut(s) 318, 444, 483, 1734, 1974
BpuEI CTTGAG 4 cut(s) 1595, 1617, 2379, 2424
BpuMI CCSGG 2 cut(s) 901, 2064
BsaAI YACGTR 1 cut(s) 1313
BsaBI GATNNNNATC 1 cut(s) 1284
BsaI GGTCTC 1 cut(s) 971
BsaXI ACNNNNNCTCC 6 cut(s) 752, 782, 1308, 1338, 1845, 1875
Bse118I RCCGGY 1 cut(s) 783
Bse3DI GCAATG 3 cut(s) 1214, 2055, 2761
Bse8I GATNNNNATC 1 cut(s) 1284
BseBI CCWGG 8 cut(s) 369, 603, 1001, 1086, 1385, 2284, 2352, 2787
BseGI GGATG 7 cut(s) 377, 475, 522, 1480, 2341, 2347, 2596
BseJI GATNNNNATC 1 cut(s) 1284
BseMI GCAATG 3 cut(s) 1214, 2055, 2761
BseRI GAGGAG 4 cut(s) 28, 306, 348, 893
BseXI GCAGC 5 cut(s) 58, 387, 925, 2390, 2856
BseYI CCCAGC 2 cut(s) 60, 1239
BsgI GTGCAG 3 cut(s) 386, 662, 938
Bsh1236I CGCG 1 cut(s) 561
Bsh1285I CGRYCG 2 cut(s) 352, 2308
BshNI GGYRCC 1 cut(s) 98
BsiEI CGRYCG 2 cut(s) 352, 2308
BsiHKAI GWGCWC 3 cut(s) 160, 2002, 2440
BsiSI CCGG 5 cut(s) 102, 784, 901, 2063, 2405
BslFI GGGAC 7 cut(s) 51, 93, 897, 1366, 1575, 2265, 2515
BsmAI GTCTC 5 cut(s) 574, 747, 971, 1585, 2138
BsmBI CGTCTC 1 cut(s) 2138
BsmFI GGGAC 7 cut(s) 51, 93, 897, 1366, 1575, 2265, 2515
Bso31I GGTCTC 1 cut(s) 971
Bsp1286I GDGCHC 4 cut(s) 160, 1980, 2002, 2440
Bsp1407I TGTACA 1 cut(s) 629
Bsp19I CCATGG 2 cut(s) 1536, 1763
BspACI CCGC 7 cut(s) 33, 69, 131, 161, 276, 348, 1891
BspFNI CGCG 1 cut(s) 561
BspHI TCATGA 1 cut(s) 1453
BspLI GGNNCC 6 cut(s) 58, 100, 109, 590, 2490, 2670
BspMAI CTGCAG 1 cut(s) 2846
BspMI ACCTGC 2 cut(s) 505, 960
BspPI GGATC 9 cut(s) 133, 208, 681, 1682, 1880, 2144, 2157, 2483, 2496
BspQI GCTCTTC 1 cut(s) 803
BspT107I GGYRCC 1 cut(s) 98
BspTNI GGTCTC 1 cut(s) 971
BsrDI GCAATG 3 cut(s) 1214, 2055, 2761
BsrFI RCCGGY 1 cut(s) 783
BsrGI TGTACA 1 cut(s) 629
BssAI RCCGGY 1 cut(s) 783
BssNAI GTATAC 1 cut(s) 819
BssSI CACGAG 1 cut(s) 942
BssT1I CCWWGG 5 cut(s) 112, 187, 1536, 1763, 2295
Bst1107I GTATAC 1 cut(s) 819
Bst2BI CACGAG 1 cut(s) 942
Bst2UI CCWGG 8 cut(s) 369, 603, 1001, 1086, 1385, 2284, 2352, 2787
Bst6I CTCTTC 6 cut(s) 5, 190, 600, 803, 837, 870
BstAPI GCANNNNNTGC 1 cut(s) 2222
BstAUI TGTACA 1 cut(s) 629
BstBAI YACGTR 1 cut(s) 1313
BstC8I GCNNGC 4 cut(s) 450, 785, 1130, 2656
BstDSI CCRYGG 3 cut(s) 241, 1536, 1763
BstEII GGTNACC 2 cut(s) 182, 1615
BstENI CCTNNNNNAGG 2 cut(s) 321, 2349
BstF5I GGATG 7 cut(s) 377, 475, 522, 1480, 2341, 2347, 2596
BstFNI CGCG 1 cut(s) 561
BstH2I RGCGCY 2 cut(s) 1630, 2331
BstHHI GCGC 4 cut(s) 1353, 1629, 2330, 2660
BstMAI GTCTC 5 cut(s) 574, 747, 971, 1585, 2138
BstMCI CGRYCG 2 cut(s) 352, 2308
BstNI CCWGG 8 cut(s) 369, 603, 1001, 1086, 1385, 2284, 2352, 2787
BstNSI RCATGY 1 cut(s) 2189
BstPI GGTNACC 2 cut(s) 182, 1615
BstSFI CTRYAG 2 cut(s) 2584, 2842
BstUI CGCG 1 cut(s) 561
BstV1I GCAGC 5 cut(s) 58, 387, 925, 2390, 2856
BstV2I GAAGAC 2 cut(s) 1105, 1490
BstX2I RGATCY 8 cut(s) 125, 200, 673, 1687, 1872, 2136, 2149, 2488
BstXI CCANNNNNNTGG 1 cut(s) 1784
BstYI RGATCY 8 cut(s) 125, 200, 673, 1687, 1872, 2136, 2149, 2488
BstZ17I GTATAC 1 cut(s) 819
BsuI GTATCC 1 cut(s) 2173
BtgI CCRYGG 3 cut(s) 241, 1536, 1763
BtsCI GGATG 7 cut(s) 377, 475, 522, 1480, 2341, 2347, 2596
BtsIMutI CAGTG 8 cut(s) 349, 1826, 1912, 2002, 2174, 2486, 2605, 2663
BveI ACCTGC 2 cut(s) 505, 960
Cac8I GCNNGC 4 cut(s) 450, 785, 1130, 2656
CaiI CAGNNNCTG 1 cut(s) 1246
CciI TCATGA 1 cut(s) 1453
CfoI GCGC 4 cut(s) 1353, 1629, 2330, 2660
Cfr10I RCCGGY 1 cut(s) 783
Cfr13I GGNCC 8 cut(s) 107, 278, 311, 359, 374, 827, 1006, 2605
CseI GACGC 3 cut(s) 53, 2347, 2702
CsiI ACCWGGT 1 cut(s) 2785
Csp6I GTAC 8 cut(s) 340, 630, 1054, 1570, 1664, 1898, 2264, 2790
CviAII CATG 8 cut(s) 1454, 1537, 1764, 1778, 1960, 2042, 2186, 2849
CviQI GTAC 8 cut(s) 340, 630, 1054, 1570, 1664, 1898, 2264, 2790
DraI TTTAAA 3 cut(s) 1179, 2130, 2476
DraIII CACNNNGTG 3 cut(s) 627, 722, 1112
DrdI GACNNNNNNGTC 1 cut(s) 2084
DriI GACNNNNNGTC 1 cut(s) 1665
DseDI GACNNNNNNGTC 1 cut(s) 2084
EaeI YGGCCR 2 cut(s) 238, 2402
Eam1104I CTCTTC 6 cut(s) 5, 190, 600, 803, 837, 870
Eam1105I GACNNNNNGTC 1 cut(s) 1665
EarI CTCTTC 6 cut(s) 5, 190, 600, 803, 837, 870
EciI GGCGGA 2 cut(s) 120, 150
Ecl136II GAGCTC 1 cut(s) 158
Eco130I CCWWGG 5 cut(s) 112, 187, 1536, 1763, 2295
Eco147I AGGCCT 1 cut(s) 2654
Eco24I GRGCYC 2 cut(s) 160, 1980
Eco31I GGTCTC 1 cut(s) 971
Eco47I GGWCC 3 cut(s) 107, 359, 827
Eco53kI GAGCTC 1 cut(s) 158
Eco57I CTGAAG 3 cut(s) 474, 995, 1704
Eco91I GGTNACC 2 cut(s) 182, 1615
EcoICRI GAGCTC 1 cut(s) 158
EcoNI CCTNNNNNAGG 2 cut(s) 321, 2349
EcoO109I RGGNCCY 4 cut(s) 107, 311, 359, 1006
EcoO65I GGTNACC 2 cut(s) 182, 1615
EcoRI GAATTC 1 cut(s) 2856
EcoRII CCWGG 8 cut(s) 367, 601, 999, 1084, 1383, 2282, 2350, 2785
EcoT14I CCWWGG 5 cut(s) 112, 187, 1536, 1763, 2295
EcoT38I GRGCYC 2 cut(s) 160, 1980
ErhI CCWWGG 5 cut(s) 112, 187, 1536, 1763, 2295
Esp3I CGTCTC 1 cut(s) 2138
FaeI CATG 8 cut(s) 1457, 1540, 1767, 1781, 1963, 2045, 2189, 2852
FaqI GGGAC 7 cut(s) 51, 93, 897, 1366, 1575, 2265, 2515
FatI CATG 8 cut(s) 1453, 1536, 1763, 1777, 1959, 2041, 2185, 2848
FauI CCCGC 2 cut(s) 76, 1898
FbaI TGATCA 1 cut(s) 2008
FblI GTMKAC 1 cut(s) 818
Fnu4HI GCNGC 6 cut(s) 72, 277, 401, 939, 2379, 2845
FokI GGATG 7 cut(s) 364, 462, 509, 1467, 2328, 2334, 2603
FriOI GRGCYC 2 cut(s) 160, 1980
Fsp4HI GCNGC 6 cut(s) 72, 277, 401, 939, 2379, 2845
FspBI CTAG 7 cut(s) 30, 543, 573, 749, 869, 1050, 1392
FspI TGCGCA 1 cut(s) 1352
GlaI GCGC 4 cut(s) 1352, 1628, 2329, 2659
GluI GCNGC 6 cut(s) 72, 277, 401, 939, 2379, 2845
GsaI CCCAGC 2 cut(s) 64, 1243
GsuI CTGGAG 2 cut(s) 2266, 2687
HaeII RGCGCY 2 cut(s) 1630, 2331
HapII CCGG 5 cut(s) 102, 784, 901, 2063, 2405
HgaI GACGC 3 cut(s) 53, 2347, 2702
HhaI GCGC 4 cut(s) 1353, 1629, 2330, 2660
Hin1II CATG 8 cut(s) 1457, 1540, 1767, 1781, 1963, 2045, 2189, 2852
Hin6I GCGC 4 cut(s) 1351, 1627, 2328, 2658
HinP1I GCGC 4 cut(s) 1351, 1627, 2328, 2658
HpaII CCGG 5 cut(s) 102, 784, 901, 2063, 2405
HphI GGTGA 7 cut(s) 16, 378, 430, 1124, 1627, 2135, 2807
Hpy166II GTNNAC 6 cut(s) 630, 727, 819, 1414, 2204, 2800
Hpy188I TCNGA 8 cut(s) 49, 397, 493, 920, 1279, 1285, 1709, 1941
Hpy8I GTNNAC 6 cut(s) 630, 727, 819, 1414, 2204, 2800
HpyAV CCTTC 9 cut(s) 114, 144, 372, 498, 841, 1019, 1782, 2090, 2236
HpyCH4IV ACGT 5 cut(s) 1312, 1379, 1666, 1896, 2220
HpySE526I ACGT 5 cut(s) 1312, 1379, 1666, 1896, 2220
Hsp92II CATG 8 cut(s) 1457, 1540, 1767, 1781, 1963, 2045, 2189, 2852
HspAI GCGC 4 cut(s) 1351, 1627, 2328, 2658
KroI GCCGGC 1 cut(s) 783
KroNI GCCGGC 1 cut(s) 785
Ksp22I TGATCA 1 cut(s) 2008
LguI GCTCTTC 1 cut(s) 803
LmnI GCTCC 8 cut(s) 79, 155, 163, 544, 1642, 2071, 2455, 2668
Lsp1109I GCAGC 5 cut(s) 58, 387, 925, 2390, 2856
LweI GCATC 6 cut(s) 982, 2035, 2263, 2350, 2583, 2629
MabI ACCWGGT 1 cut(s) 2785
MaeI CTAG 7 cut(s) 30, 543, 573, 749, 869, 1050, 1392
MaeII ACGT 5 cut(s) 1312, 1379, 1666, 1896, 2220
MfeI CAATTG 3 cut(s) 1867, 2373, 2760
MflI RGATCY 8 cut(s) 125, 200, 673, 1687, 1872, 2136, 2149, 2488
MhlI GDGCHC 4 cut(s) 160, 1980, 2002, 2440
MluI ACGCGT 1 cut(s) 559
MlyI GAGTC 3 cut(s) 59, 761, 2795
MmeI TCCRAC 4 cut(s) 278, 1181, 1486, 1795
MroNI GCCGGC 1 cut(s) 783
MroXI GAANNNNTTC 3 cut(s) 851, 1449, 2872
MslI CAYNNNNRTG 1 cut(s) 684
MspA1I CMGCKG 2 cut(s) 71, 2381
MspI CCGG 5 cut(s) 102, 784, 901, 2063, 2405
MssI GTTTAAAC 1 cut(s) 2476
MunI CAATTG 3 cut(s) 1867, 2373, 2760
MvaI CCWGG 8 cut(s) 369, 603, 1001, 1086, 1385, 2284, 2352, 2787
MvnI CGCG 1 cut(s) 561
NaeI GCCGGC 1 cut(s) 785
NciI CCSGG 2 cut(s) 901, 2064
NcoI CCATGG 2 cut(s) 1536, 1763
NgoMIV GCCGGC 1 cut(s) 783
NlaIII CATG 8 cut(s) 1457, 1540, 1767, 1781, 1963, 2045, 2189, 2852
NlaIV GGNNCC 6 cut(s) 58, 100, 109, 590, 2490, 2670
NmeAIII GCCGAG 1 cut(s) 356
NmuCI GTSAC 6 cut(s) 709, 1615, 1946, 2335, 2689, 2813
NsbI TGCGCA 1 cut(s) 1352
NspI RCATGY 1 cut(s) 2189
PagI TCATGA 1 cut(s) 1453
PceI AGGCCT 1 cut(s) 2654
PciI ACATGT 1 cut(s) 2185
PciSI GCTCTTC 1 cut(s) 803
PdiI GCCGGC 1 cut(s) 785
PdmI GAANNNNTTC 3 cut(s) 851, 1449, 2872
PfeI GAWTC 7 cut(s) 435, 1249, 1280, 1726, 2059, 2360, 2868
PflFI GACNNNGTC 1 cut(s) 2506
PkrI GCNGC 6 cut(s) 73, 278, 402, 940, 2380, 2846
PleI GAGTC 3 cut(s) 58, 761, 2795
PmeI GTTTAAAC 1 cut(s) 2476
PpsI GAGTC 3 cut(s) 58, 761, 2795
Ppu21I YACGTR 1 cut(s) 1313
PpuMI RGGWCCY 2 cut(s) 107, 359
PscI ACATGT 1 cut(s) 2185
Psp124BI GAGCTC 1 cut(s) 160
Psp1406I AACGTT 1 cut(s) 2220
Psp5II RGGWCCY 2 cut(s) 107, 359
Psp6I CCWGG 8 cut(s) 367, 601, 999, 1084, 1383, 2282, 2350, 2785
PspEI GGTNACC 2 cut(s) 182, 1615
PspFI CCCAGC 2 cut(s) 60, 1239
PspGI CCWGG 8 cut(s) 367, 601, 999, 1084, 1383, 2282, 2350, 2785
PspN4I GGNNCC 6 cut(s) 58, 100, 109, 590, 2490, 2670
PspPI GGNCC 8 cut(s) 107, 278, 311, 359, 374, 827, 1006, 2605
PspPPI RGGWCCY 2 cut(s) 107, 359
PstI CTGCAG 1 cut(s) 2846
PstNI CAGNNNCTG 1 cut(s) 1246
PsuI RGATCY 8 cut(s) 125, 200, 673, 1687, 1872, 2136, 2149, 2488
PsyI GACNNNGTC 1 cut(s) 2506
PvuII CAGCTG 1 cut(s) 2381
RsaI GTAC 8 cut(s) 341, 631, 1055, 1571, 1665, 1899, 2265, 2791
RsaNI GTAC 8 cut(s) 340, 630, 1054, 1570, 1664, 1898, 2264, 2790
RseI CAYNNNNRTG 1 cut(s) 684
SacI GAGCTC 1 cut(s) 160
SapI GCTCTTC 1 cut(s) 803
SatI GCNGC 6 cut(s) 72, 277, 401, 939, 2379, 2845
Sau96I GGNCC 8 cut(s) 107, 278, 311, 359, 374, 827, 1006, 2605
ScaI AGTACT 1 cut(s) 2265
SchI GAGTC 3 cut(s) 59, 761, 2795
SduI GDGCHC 4 cut(s) 160, 1980, 2002, 2440
SexAI ACCWGGT 1 cut(s) 2785
SfaNI GCATC 6 cut(s) 982, 2035, 2263, 2350, 2583, 2629
SfcI CTRYAG 2 cut(s) 2584, 2842
SinI GGWCC 3 cut(s) 107, 359, 827
SmiMI CAYNNNNRTG 1 cut(s) 684
SmlI CTYRAG 4 cut(s) 1610, 1632, 2394, 2439
SmoI CTYRAG 4 cut(s) 1610, 1632, 2394, 2439
SseBI AGGCCT 1 cut(s) 2654
SsiI CCGC 7 cut(s) 33, 69, 131, 161, 276, 348, 1891
SspI AATATT 1 cut(s) 1183
SspMI CTAG 7 cut(s) 30, 543, 573, 749, 869, 1050, 1392
SstI GAGCTC 1 cut(s) 160
StuI AGGCCT 1 cut(s) 2654
StyI CCWWGG 5 cut(s) 112, 187, 1536, 1763, 2295
TaiI ACGT 5 cut(s) 1315, 1382, 1669, 1899, 2223
TaqI TCGA 4 cut(s) 845, 1196, 2002, 2035
TatI WGTACW 2 cut(s) 629, 2263
TauI GCSGC 1 cut(s) 279
TfiI GAWTC 7 cut(s) 435, 1249, 1280, 1726, 2059, 2360, 2868
TscAI CASTG 8 cut(s) 349, 1826, 1912, 2002, 2174, 2486, 2605, 2670
TseFI GTSAC 6 cut(s) 709, 1615, 1946, 2335, 2689, 2813
TseI GCWGC 5 cut(s) 71, 400, 938, 2378, 2844
Tsp45I GTSAC 6 cut(s) 709, 1615, 1946, 2335, 2689, 2813
TspDTI ATGAA 8 cut(s) 456, 1062, 1442, 1445, 1470, 1847, 1944, 2646
TspGWI ACGGA 3 cut(s) 820, 2162, 2269
TspRI CASTG 8 cut(s) 349, 1826, 1912, 2002, 2174, 2486, 2605, 2670
Tth111I GACNNNGTC 1 cut(s) 2506
VpaK11BI GGWCC 3 cut(s) 107, 359, 827
XagI CCTNNNNNAGG 2 cut(s) 321, 2349
XapI RAATTY 3 cut(s) 932, 1882, 2856
XbaI TCTAGA 1 cut(s) 868
XceI RCATGY 1 cut(s) 2189
XmiI GTMKAC 1 cut(s) 818
XmnI GAANNNNTTC 3 cut(s) 851, 1449, 2872
XspI CTAG 7 cut(s) 30, 543, 573, 749, 869, 1050, 1392
ZrmI AGTACT 1 cut(s) 2265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.