RchiOBHm_Chr7g0177461

Belongs to the argonaute family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0001348
Physical Location & Seq
Reverse (-)
418318 .. 423324
5007 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ15807

Sequence Viewer

Length: 2487 bp
ATGGTGAGGAAGAAGCGAGGTGGTCAACTCCCTGGTAGCGGTGGAGCTGAAGCCTATGAATCTCAGCAAGTAGCTGATCAGGCTTACCAGCAGCACAACCAAGAGGCAAGAGGAGGAGGAGGAGGAGGTTACCAACACCAAGCTGGAAGACCGCCACAAGGAGCCAACAGAGGAGGAGGAGGAGGAGGAGGAGGCTATGGCGGCGGCCGCGGCGGCCGTGGGAATGGGAATGGAAATGGTGGGATGCCATATCAGTATCAGTATCAGCAGCAGCAGCAGCAGCAGCAGTATGGTGGTCCCCCGCCCTCTGAAAATGGAGGCAGGGGGAGGGGACAGGGAGGAGGAAGTCGTGGTGGTGGAGGTTACGGCAGCGGTAGTGGCGGTGGTTACGGCCGTGGGGGAGGATCTTCTTCCGGTGGCTATGGCCCGCCCAAAACATCAATTCCTGACCTGCACCAAGCGACCCCTGCTGCTCCATATGTTGCTGGGGTCAACCCTCAGCCTCAGCCTACAACACCATCTGTGTCTTCACCTTCACCTTCACCTTCAGAACTGGTGGAGTCTTTTCAGCAGGTTTCTATTGGGCAACAAGTTGCTCCTCTTCCTGTGCAGGCAATCCAACCTATTCCCACCTCAAGTAAGTCGGTTAGGTTCCCTCTTCGCCCTGGCAGAGGCACCGTCGGCGCTAAATGTATTGTCAAGGCCAATCACTTCTTTGCTGAGTTACCTGACAAAGATCTGCACCAGTATGATGTTACTATTACACCAGACATTGCATCGAGGAGGTTGAATCGGGCTGTGATCAAGCAGCTGGTGGATTTGTACAGGCAATCCCAGCTTGGAAATAGGCTCCCTGCCTATGACGGACGGAAGAGTCTGTACACTGCTGGGCCGCTTCCTTTCTCATCCAAGGAATTCAAGATTGTGCTTGTTGATGATGATGATGGATCAGGCGGGCAAAGGAAGGAGAAGGAGAGAGAATTTAAAGTGGTGGTCAAGTTTGCTGCACGTGCTGACCTACACCATCTAGAACTCTTTTTGATGGGGAGGCAAGCTGAGGCTCCTCAGGAAGCCCTTCAGGTTCTCGACATTGTTCTGCGTGAATTGCCTACAGCTAGTTACTTTCCTGTGGCACGTTCATTTTATTCCCCTGATCTGGGGAGAAGGCAGTCGCTAGGTGAGGGTTTGGAAAGTTGGCGTGGATTCTATCAGAGTATTCGTCCAACGCAGATGGGGCTGTCTCTCAATATTGATATGTCATCTACTGCTTTCATCGAGCCACTGCCAATCATTGAATTTGTCAATCAGCTACTCAATCGAGACATTTCATTTAGACAATTGTCAGATGCTGATCGTGTGAAGATCAAGAAAGCTTTACGAGGAATCAAAGTTGAAGTTACACACCGTGGACATATGCGCAGAAAATACCGTATTACTGGATTAACATCGCAACCAACAAGAGAGCTGACTTTTCCACTTGATGAGAGAGGTACCATGAAATCTGTTGTTGACTACTTTCATGAAACTTATGGTTTCATTATAAAGCATACTCAATTGCCGTGTCTACAAGTGGGAAATCAGCAGAGATCAAATTACTTGCCCATGGAGGTCTGTAAAATAGTTGAAGGTCAGAGGTATTCCAGGAGGTTGAATGAGAGACAGATTACTGCTTTGCTGAAGGTGACCTGCCAGCGTCCTCATGAAAGGGAACGTGATATTATCCAGACAGTTCGTCAAAACGCTTACCATGAAGATCCTTATGCTCAGGAGTTTGGCATTAAAATCAGTGAGAATCTCACTTTGCTTGAAGCTCGTATTCTTCCTGCACCAAGACTTAAATATCATGATACAGGTAGAGAAAAGGATTGCCAGCCTCGAGTTGGACAGTGGAATATGATGAATAAGAAAATGGTCAATGGTGGCACAGTCAACAATTGGATGTGCATAAACTTTTCCGGGGGCGTGCAAGATGCTGTTGCCCGTCGGTTCTGTAGTGAACTTGTTCAAATGTGCAACGTTTCTGGCATGGCATTTAATCCAGAACCAGTACTTCCACCTGTCACCGCTCATCCCGGTCATGTCGAGAGGGCCCTAAAATCTCGCTTTCATGAAGCACTGACCAAACTCCAGCCCCGCGGCCAGGAGCTTGAGCTACTTATTGCTATTTTGCCAGATAATAATGGCTCTCTTTATGGTGATTTGAAGCGAATTTGTGAGACGGATCTCGGCCTTGTTTCCCAATGCTGTTTAACAAAGCATGTATTTAAAAACAATAAGCAACAGTATTTGGCAAATGTAACGTTGAAGATCAACGTGAAGGTCGGGGGAAGGAATACAGTGCTTGTTGATGCTCTGTCCAGGCGAATTCCTTTAGTCAGTGATCGACCTACCATCATTTTTGGTGCTGATGTCACCCATCCTCATCCTGGAGAGGATTCAAGTCCGTCAATTGCAGCGGTGTGTTGTGGCTTCTCAAGATTGGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArgoL1 ArgoL2 ArgoMid ArgoN Gly-rich_Ago1 PAZ Piwi

Protein Analysis

828

Amino Acids

90.78

Weight (kDa)

9.5

Isoelectric Point (pI)

44.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Gly-rich_Ago1 PF12764 111 - 210 7.2e-09 Glycine-rich region of argonaut
ArgoN PF16486 230 - 366 7.4e-37 N-terminal domain of argonaute
ArgoL1 PF08699 377 - 426 6e-21 Argonaute linker 1 domain
PAZ PF02170 432 - 558 1e-30 PAZ domain
ArgoL2 PF16488 568 - 614 1.7e-15 Argonaute linker 2 domain
ArgoMid PF16487 625 - 698 2.3e-09 Mid domain of argonaute
Piwi PF02171 719 - 821 1e-24 Piwi domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1541
AasI GACNNNNNNGTC 1 cut(s) 873
Acc16I TGCGCA 1 cut(s) 1418
Acc36I ACCTGC 3 cut(s) 459, 562, 1694
Acc65I GGTACC 1 cut(s) 1490
AccB1I GGYRCC 2 cut(s) 674, 1490
AccBSI CCGCTC 1 cut(s) 2066
AccI GTMKAC 1 cut(s) 1564
AccII CGCG 2 cut(s) 210, 2136
AclI AACGTT 2 cut(s) 2016, 2300
AclWI GGATC 4 cut(s) 412, 955, 1748, 2229
AcoI YGGCCR 4 cut(s) 205, 214, 391, 2137
AcsI RAATTY 5 cut(s) 914, 980, 1295, 2208, 2364
AcuI CTGAAG 4 cut(s) 69, 531, 1061, 1697
AcvI CACGTG 1 cut(s) 1010
AdeI CACNNNGTG 1 cut(s) 1406
AfaI GTAC 4 cut(s) 824, 881, 1492, 2049
AfiI CCNNNNNNNGG 8 cut(s) 38, 158, 671, 1156, 1157, 1880, 2140, 2426
AhdI GACNNNNNGTC 1 cut(s) 1731
AjnI CCWGG 6 cut(s) 31, 664, 1640, 2139, 2357, 2425
Alw26I GTCTC 4 cut(s) 1245, 1314, 1651, 2210
AlwI GGATC 4 cut(s) 412, 955, 1748, 2229
AlwNI CAGNNNCTG 1 cut(s) 1349
Ama87I CYCGRG 1 cut(s) 1875
ApaI GGGCCC 1 cut(s) 2092
ApoI RAATTY 5 cut(s) 914, 980, 1295, 2208, 2364
Asp700I GAANNNNTTC 2 cut(s) 1074, 2001
Asp718I GGTACC 1 cut(s) 1490
AspLEI GCGC 2 cut(s) 686, 1419
AspS9I GGNCC 5 cut(s) 296, 425, 890, 2088, 2089
AsuC2I CCSGG 2 cut(s) 1957, 2073
AsuHPI GGTGA 9 cut(s) 16, 522, 528, 534, 1190, 1693, 2053, 2207, 2404
AvaI CYCGRG 1 cut(s) 1875
AvaII GGWCC 1 cut(s) 296
AxyI CCTNAGG 1 cut(s) 1065
BaeGI GKGCMC 1 cut(s) 2092
BanI GGYRCC 2 cut(s) 674, 1490
BanII GRGCYC 1 cut(s) 2092
BarI GAAGNNNNNNTAC 2 cut(s) 863, 895
BbrPI CACGTG 1 cut(s) 1010
BbsI GAAGAC 2 cut(s) 154, 519
BbvCI CCTCAGC 3 cut(s) 498, 504, 1056
BccI CCATC 7 cut(s) 526, 938, 1032, 1036, 1225, 2399, 2424
BceAI ACGGC 5 cut(s) 201, 378, 382, 406, 1543
BciT130I CCWGG 6 cut(s) 33, 666, 1642, 2141, 2359, 2427
BclI TGATCA 2 cut(s) 76, 801
BcnI CCSGG 2 cut(s) 1957, 2073
BcoDI GTCTC 4 cut(s) 1245, 1314, 1651, 2210
BfaI CTAG 3 cut(s) 1028, 1116, 1175
BfmI CTRYAG 2 cut(s) 1110, 1990
BfoI RGCGCY 1 cut(s) 687
BfuAI ACCTGC 3 cut(s) 459, 562, 1694
BglI GCCNNNNNGGC 1 cut(s) 213
BglII AGATCT 1 cut(s) 736
BmcAI AGTACT 1 cut(s) 2049
Bme1390I CCNGG 8 cut(s) 33, 666, 1642, 1957, 2073, 2141, 2359, 2427
Bme18I GGWCC 1 cut(s) 296
BmeRI GACNNNNNGTC 1 cut(s) 1731
BmeT110I CYCGRG 1 cut(s) 1875
BmgT120I GGNCC 5 cut(s) 296, 425, 890, 2088, 2089
BmiI GGNNCC 8 cut(s) 163, 298, 653, 676, 851, 1062, 1492, 2090
BmrFI CCNGG 8 cut(s) 33, 666, 1642, 1957, 2073, 2141, 2359, 2427
BmsI GCATC 5 cut(s) 234, 785, 1336, 1960, 2338
BoxI GACNNNNGTC 1 cut(s) 1339
BpiI GAAGAC 2 cut(s) 154, 519
BpmI CTGGAG 2 cut(s) 2111, 2448
Bpu10I CCTNAGC 4 cut(s) 498, 504, 1056, 1764
BpuEI CTTGAG 3 cut(s) 619, 2168, 2458
BpuMI CCSGG 2 cut(s) 1957, 2073
BsaAI YACGTR 1 cut(s) 1010
BsaBI GATNNNNATC 2 cut(s) 1350, 1444
BsaWI WCCGGW 1 cut(s) 413
Bsc4I CCNNNNNNNGG 8 cut(s) 38, 158, 671, 1156, 1157, 1880, 2140, 2426
Bse1I ACTGG 4 cut(s) 558, 745, 1441, 2045
Bse21I CCTNAGG 1 cut(s) 1065
Bse3DI GCAATG 1 cut(s) 771
Bse8I GATNNNNATC 2 cut(s) 1350, 1444
BseBI CCWGG 6 cut(s) 33, 666, 1642, 2141, 2359, 2427
BseGI GGATG 6 cut(s) 249, 905, 1944, 2068, 2416, 2422
BseJI GATNNNNATC 2 cut(s) 1350, 1444
BseLI CCNNNNNNNGG 8 cut(s) 38, 158, 671, 1156, 1157, 1880, 2140, 2426
BseMI GCAATG 1 cut(s) 771
BseMII CTCAG 7 cut(s) 77, 512, 518, 711, 1047, 1079, 1778
BseNI ACTGG 4 cut(s) 558, 745, 1441, 2045
BseSI GKGCMC 1 cut(s) 2092
BseX3I CGGCCG 3 cut(s) 205, 214, 391
BseYI CCCAGC 3 cut(s) 485, 834, 887
BsgI GTGCAG 5 cut(s) 437, 629, 725, 990, 1809
Bsh1236I CGCG 2 cut(s) 210, 2136
Bsh1285I CGRYCG 3 cut(s) 208, 217, 394
BshNI GGYRCC 2 cut(s) 674, 1490
BsiEI CGRYCG 3 cut(s) 208, 217, 394
BsiHKCI CYCGRG 1 cut(s) 1875
BsiSI CCGG 3 cut(s) 414, 1956, 2073
BslFI GGGAC 2 cut(s) 282, 345
BslI CCNNNNNNNGG 8 cut(s) 38, 158, 671, 1156, 1157, 1880, 2140, 2426
BsmAI GTCTC 4 cut(s) 1245, 1314, 1651, 2210
BsmBI CGTCTC 1 cut(s) 2210
BsmFI GGGAC 2 cut(s) 282, 345
BsoBI CYCGRG 1 cut(s) 1875
Bsp120I GGGCCC 1 cut(s) 2088
Bsp1286I GDGCHC 1 cut(s) 2092
Bsp1407I TGTACA 2 cut(s) 822, 879
Bsp19I CCATGG 1 cut(s) 1602
BspCNI CTCAG 7 cut(s) 76, 511, 517, 712, 1048, 1078, 1777
BspFNI CGCG 2 cut(s) 210, 2136
BspHI TCATGA 4 cut(s) 1519, 1699, 1843, 2107
BspLI GGNNCC 8 cut(s) 163, 298, 653, 676, 851, 1062, 1492, 2090
BspMI ACCTGC 3 cut(s) 459, 562, 1694
BspPI GGATC 4 cut(s) 412, 955, 1748, 2229
BspT107I GGYRCC 2 cut(s) 674, 1490
BsrBI CCGCTC 1 cut(s) 2066
BsrDI GCAATG 1 cut(s) 771
BsrGI TGTACA 2 cut(s) 822, 879
BsrI ACTGG 4 cut(s) 558, 745, 1441, 2045
BssT1I CCWWGG 2 cut(s) 909, 1602
Bst2UI CCWGG 6 cut(s) 33, 666, 1642, 2141, 2359, 2427
Bst4CI ACNGT 8 cut(s) 679, 1406, 1430, 1729, 1887, 1927, 2283, 2338
Bst6I CTCTTC 3 cut(s) 606, 663, 866
BstAUI TGTACA 2 cut(s) 822, 879
BstBAI YACGTR 1 cut(s) 1010
BstC8I GCNNGC 7 cut(s) 428, 612, 956, 1053, 1691, 1871, 1964
BstDEI CTNAG 7 cut(s) 63, 498, 504, 720, 1056, 1065, 1764
BstDSI CCRYGG 6 cut(s) 208, 217, 394, 1405, 1602, 2134
BstEII GGTNACC 2 cut(s) 128, 1681
BstENI CCTNNNNNAGG 1 cut(s) 669
BstF5I GGATG 6 cut(s) 249, 905, 1944, 2068, 2416, 2422
BstFNI CGCG 2 cut(s) 210, 2136
BstH2I RGCGCY 1 cut(s) 687
BstHHI GCGC 2 cut(s) 686, 1419
BstMAI GTCTC 4 cut(s) 1245, 1314, 1651, 2210
BstMCI CGRYCG 3 cut(s) 208, 217, 394
BstNI CCWGG 6 cut(s) 33, 666, 1642, 2141, 2359, 2427
BstNSI RCATGY 1 cut(s) 2261
BstPAI GACNNNNGTC 1 cut(s) 1339
BstPI GGTNACC 2 cut(s) 128, 1681
BstSCI CCNGG 8 cut(s) 31, 664, 1640, 1955, 2071, 2139, 2357, 2425
BstSFI CTRYAG 2 cut(s) 1110, 1990
BstSLI GKGCMC 1 cut(s) 2092
BstUI CGCG 2 cut(s) 210, 2136
BstV2I GAAGAC 2 cut(s) 154, 519
BstX2I RGATCY 4 cut(s) 404, 736, 1753, 2221
BstYI RGATCY 4 cut(s) 404, 736, 1753, 2221
BstZI CGGCCG 3 cut(s) 205, 214, 391
Bsu36I CCTNAGG 1 cut(s) 1065
BtgI CCRYGG 6 cut(s) 208, 217, 394, 1405, 1602, 2134
BtgZI GCGATG 1 cut(s) 1431
BtsCI GGATG 6 cut(s) 249, 905, 1944, 2068, 2416, 2422
BtsI GCAGTG 2 cut(s) 882, 1280
BtsIMutI CAGTG 7 cut(s) 882, 1280, 1792, 1892, 2114, 2343, 2383
BveI ACCTGC 3 cut(s) 459, 562, 1694
Cac8I GCNNGC 7 cut(s) 428, 612, 956, 1053, 1691, 1871, 1964
CaiI CAGNNNCTG 1 cut(s) 1349
CciI TCATGA 4 cut(s) 1519, 1699, 1843, 2107
CciNI GCGGCCGC 1 cut(s) 205
CfoI GCGC 2 cut(s) 686, 1419
Cfr13I GGNCC 5 cut(s) 296, 425, 890, 2088, 2089
Cfr42I CCGCGG 2 cut(s) 211, 2137
CseI GACGC 1 cut(s) 1682
Csp6I GTAC 4 cut(s) 823, 880, 1491, 2048
CviQI GTAC 4 cut(s) 823, 880, 1491, 2048
DdeI CTNAG 7 cut(s) 63, 498, 504, 720, 1056, 1065, 1764
DraI TTTAAA 2 cut(s) 985, 2266
DraIII CACNNNGTG 1 cut(s) 1406
DrdI GACNNNNNNGTC 1 cut(s) 873
DriI GACNNNNNGTC 1 cut(s) 1731
DseDI GACNNNNNNGTC 1 cut(s) 873
EaeI YGGCCR 4 cut(s) 205, 214, 391, 2137
EagI CGGCCG 3 cut(s) 205, 214, 391
Eam1104I CTCTTC 3 cut(s) 606, 663, 866
Eam1105I GACNNNNNGTC 1 cut(s) 1731
EarI CTCTTC 3 cut(s) 606, 663, 866
EclXI CGGCCG 3 cut(s) 205, 214, 391
Eco130I CCWWGG 2 cut(s) 909, 1602
Eco24I GRGCYC 1 cut(s) 2092
Eco47I GGWCC 1 cut(s) 296
Eco52I CGGCCG 3 cut(s) 205, 214, 391
Eco57I CTGAAG 4 cut(s) 69, 531, 1061, 1697
Eco72I CACGTG 1 cut(s) 1010
Eco81I CCTNAGG 1 cut(s) 1065
Eco88I CYCGRG 1 cut(s) 1875
Eco91I GGTNACC 2 cut(s) 128, 1681
EcoNI CCTNNNNNAGG 1 cut(s) 669
EcoO109I RGGNCCY 2 cut(s) 2088, 2089
EcoO65I GGTNACC 2 cut(s) 128, 1681
EcoRI GAATTC 2 cut(s) 914, 2364
EcoRII CCWGG 6 cut(s) 31, 664, 1640, 2139, 2357, 2425
EcoT14I CCWWGG 2 cut(s) 909, 1602
EcoT38I GRGCYC 1 cut(s) 2092
ErhI CCWWGG 2 cut(s) 909, 1602
Esp3I CGTCTC 1 cut(s) 2210
FaqI GGGAC 2 cut(s) 282, 345
FauI CCCGC 4 cut(s) 309, 435, 947, 2141
FauNDI CATATG 2 cut(s) 478, 1413
FbaI TGATCA 2 cut(s) 76, 801
FblI GTMKAC 1 cut(s) 1564
FokI GGATG 6 cut(s) 256, 892, 1951, 2055, 2403, 2409
FriOI GRGCYC 1 cut(s) 2092
FspBI CTAG 3 cut(s) 1028, 1116, 1175
FspI TGCGCA 1 cut(s) 1418
GlaI GCGC 2 cut(s) 685, 1418
GsaI CCCAGC 3 cut(s) 489, 838, 891
GsuI CTGGAG 2 cut(s) 2111, 2448
HaeII RGCGCY 1 cut(s) 687
HapII CCGG 3 cut(s) 414, 1956, 2073
HgaI GACGC 1 cut(s) 1682
HhaI GCGC 2 cut(s) 686, 1419
Hin6I GCGC 2 cut(s) 684, 1417
HinP1I GCGC 2 cut(s) 684, 1417
HincII GTYRAC 4 cut(s) 26, 493, 1510, 1930
HindII GTYRAC 4 cut(s) 26, 493, 1510, 1930
HindIII AAGCTT 1 cut(s) 1371
HinfI GANTC 8 cut(s) 59, 560, 790, 874, 1203, 1383, 1792, 2435
HpaII CCGG 3 cut(s) 414, 1956, 2073
HphI GGTGA 9 cut(s) 16, 522, 528, 534, 1190, 1693, 2053, 2207, 2404
Hpy166II GTNNAC 8 cut(s) 26, 493, 882, 1409, 1510, 1565, 1930, 1997
Hpy188I TCNGA 5 cut(s) 310, 550, 1212, 1345, 1632
Hpy8I GTNNAC 8 cut(s) 26, 493, 882, 1409, 1510, 1565, 1930, 1997
Hpy99I CGWCG 2 cut(s) 683, 1986
HpyCH4III ACNGT 8 cut(s) 679, 1406, 1430, 1729, 1887, 1927, 2283, 2338
HpyCH4IV ACGT 6 cut(s) 1009, 1135, 1711, 2016, 2300, 2313
HpyF3I CTNAG 7 cut(s) 63, 498, 504, 720, 1056, 1065, 1764
HpySE526I ACGT 6 cut(s) 1009, 1135, 1711, 2016, 2300, 2313
HspAI GCGC 2 cut(s) 684, 1417
KpnI GGTACC 1 cut(s) 1494
Ksp22I TGATCA 2 cut(s) 76, 801
KspI CCGCGG 2 cut(s) 211, 2137
LmnI GCTCC 7 cut(s) 44, 161, 478, 601, 855, 1066, 2143
LweI GCATC 5 cut(s) 234, 785, 1336, 1960, 2338
MaeI CTAG 3 cut(s) 1028, 1116, 1175
MaeII ACGT 6 cut(s) 1009, 1135, 1711, 2016, 2300, 2313
MbiI CCGCTC 1 cut(s) 2066
MfeI CAATTG 4 cut(s) 1337, 1553, 1933, 2448
MflI RGATCY 4 cut(s) 404, 736, 1753, 2221
MhlI GDGCHC 1 cut(s) 2092
MlyI GAGTC 2 cut(s) 569, 883
MmeI TCCRAC 3 cut(s) 643, 1247, 1861
MroXI GAANNNNTTC 2 cut(s) 1074, 2001
MseI TTAA 7 cut(s) 984, 1442, 1779, 1836, 2034, 2249, 2265
MslI CAYNNNNRTG 1 cut(s) 747
MspA1I CMGCKG 5 cut(s) 210, 372, 811, 2136, 2456
MspI CCGG 3 cut(s) 414, 1956, 2073
MspR9I CCNGG 8 cut(s) 33, 666, 1642, 1957, 2073, 2141, 2359, 2427
MunI CAATTG 4 cut(s) 1337, 1553, 1933, 2448
MvaI CCWGG 6 cut(s) 33, 666, 1642, 2141, 2359, 2427
MvnI CGCG 2 cut(s) 210, 2136
NciI CCSGG 2 cut(s) 1957, 2073
NcoI CCATGG 1 cut(s) 1602
NdeI CATATG 2 cut(s) 478, 1413
NlaIV GGNNCC 8 cut(s) 163, 298, 653, 676, 851, 1062, 1492, 2090
NmeAIII GCCGAG 1 cut(s) 2205
NmuCI GTSAC 3 cut(s) 1681, 2059, 2410
NotI GCGGCCGC 1 cut(s) 205
NsbI TGCGCA 1 cut(s) 1418
NspI RCATGY 1 cut(s) 2261
PaeR7I CTCGAG 1 cut(s) 1875
PagI TCATGA 4 cut(s) 1519, 1699, 1843, 2107
PdmI GAANNNNTTC 2 cut(s) 1074, 2001
PfeI GAWTC 6 cut(s) 59, 790, 1203, 1383, 1792, 2435
PfoI TCCNGGA 2 cut(s) 1640, 2425
PleI GAGTC 2 cut(s) 568, 882
PmaCI CACGTG 1 cut(s) 1010
PmlI CACGTG 1 cut(s) 1010
PpsI GAGTC 2 cut(s) 568, 882
Ppu21I YACGTR 1 cut(s) 1010
PshAI GACNNNNGTC 1 cut(s) 1339
PsiI TTATAA 1 cut(s) 1541
Psp1406I AACGTT 2 cut(s) 2016, 2300
Psp6I CCWGG 6 cut(s) 31, 664, 1640, 2139, 2357, 2425
PspCI CACGTG 1 cut(s) 1010
PspEI GGTNACC 2 cut(s) 128, 1681
PspFI CCCAGC 3 cut(s) 485, 834, 887
PspGI CCWGG 6 cut(s) 31, 664, 1640, 2139, 2357, 2425
PspN4I GGNNCC 8 cut(s) 163, 298, 653, 676, 851, 1062, 1492, 2090
PspOMI GGGCCC 1 cut(s) 2088
PspPI GGNCC 5 cut(s) 296, 425, 890, 2088, 2089
PspXI VCTCGAGB 1 cut(s) 1875
PstNI CAGNNNCTG 1 cut(s) 1349
PsuI RGATCY 4 cut(s) 404, 736, 1753, 2221
PvuII CAGCTG 1 cut(s) 811
RsaI GTAC 4 cut(s) 824, 881, 1492, 2049
RsaNI GTAC 4 cut(s) 823, 880, 1491, 2048
RseI CAYNNNNRTG 1 cut(s) 747
SacII CCGCGG 2 cut(s) 211, 2137
SaqAI TTAA 7 cut(s) 984, 1442, 1779, 1836, 2034, 2249, 2265
Sau96I GGNCC 5 cut(s) 296, 425, 890, 2088, 2089
ScaI AGTACT 1 cut(s) 2049
SchI GAGTC 2 cut(s) 569, 883
ScrFI CCNGG 8 cut(s) 33, 666, 1642, 1957, 2073, 2141, 2359, 2427
SduI GDGCHC 1 cut(s) 2092
SfaNI GCATC 5 cut(s) 234, 785, 1336, 1960, 2338
SfcI CTRYAG 2 cut(s) 1110, 1990
SfiI GGCCNNNNNGGCC 1 cut(s) 213
Sfr274I CTCGAG 1 cut(s) 1875
Sfr303I CCGCGG 2 cut(s) 211, 2137
SgrBI CCGCGG 2 cut(s) 211, 2137
SinI GGWCC 1 cut(s) 296
SlaI CTCGAG 1 cut(s) 1875
SmiMI CAYNNNNRTG 1 cut(s) 747
SmlI CTYRAG 4 cut(s) 634, 1875, 2147, 2473
SmoI CTYRAG 4 cut(s) 634, 1875, 2147, 2473
SspI AATATT 1 cut(s) 1249
SspMI CTAG 3 cut(s) 1028, 1116, 1175
StyD4I CCNGG 8 cut(s) 31, 664, 1640, 1955, 2071, 2139, 2357, 2425
StyI CCWWGG 2 cut(s) 909, 1602
TaaI ACNGT 8 cut(s) 679, 1406, 1430, 1729, 1887, 1927, 2283, 2338
TaiI ACGT 6 cut(s) 1012, 1138, 1714, 2019, 2303, 2316
TaqI TCGA 7 cut(s) 779, 1086, 1275, 1318, 1876, 2082, 2383
TatI WGTACW 3 cut(s) 822, 879, 2047
TauI GCSGC 7 cut(s) 204, 207, 210, 213, 216, 895, 2139
TfiI GAWTC 6 cut(s) 59, 790, 1203, 1383, 1792, 2435
Tru1I TTAA 7 cut(s) 984, 1442, 1779, 1836, 2034, 2249, 2265
Tru9I TTAA 7 cut(s) 984, 1442, 1779, 1836, 2034, 2249, 2265
TscAI CASTG 7 cut(s) 889, 1287, 1792, 1892, 2121, 2343, 2383
TseFI GTSAC 3 cut(s) 1681, 2059, 2410
Tsp45I GTSAC 3 cut(s) 1681, 2059, 2410
TspGWI ACGGA 4 cut(s) 879, 883, 2234, 2433
TspRI CASTG 7 cut(s) 889, 1287, 1792, 1892, 2121, 2343, 2383
VpaK11BI GGWCC 1 cut(s) 296
XagI CCTNNNNNAGG 1 cut(s) 669
XapI RAATTY 5 cut(s) 914, 980, 1295, 2208, 2364
XbaI TCTAGA 1 cut(s) 1027
XceI RCATGY 1 cut(s) 2261
XcmI CCANNNNNNNNNTGG 3 cut(s) 140, 1877, 2423
XhoI CTCGAG 1 cut(s) 1875
XmiI GTMKAC 1 cut(s) 1564
XmnI GAANNNNTTC 2 cut(s) 1074, 2001
XspI CTAG 3 cut(s) 1028, 1116, 1175
ZrmI AGTACT 1 cut(s) 2049
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.