Belongs to the argonaute family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Gly-rich_Ago1 | PF12764 | 95 - 192 | 3.7e-08 | Glycine-rich region of argonaut |
| ArgoN | PF16486 | 212 - 348 | 1.1e-36 | N-terminal domain of argonaute |
| ArgoL1 | PF08699 | 359 - 408 | 8.2e-21 | Argonaute linker 1 domain |
| PAZ | PF02170 | 414 - 540 | 1.5e-30 | PAZ domain |
| ArgoL2 | PF16488 | 550 - 596 | 2.3e-15 | Argonaute linker 2 domain |
| ArgoMid | PF16487 | 607 - 680 | 3.3e-09 | Mid domain of argonaute |
| Piwi | PF02171 | 701 - 1020 | 2.4e-115 | Piwi domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1487 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 819 |
| Acc16I | TGCGCA | 1 cut(s) | 1364 |
| Acc36I | ACCTGC | 4 cut(s) | 411, 508, 1640, 3196 |
| Acc65I | GGTACC | 1 cut(s) | 1436 |
| AccB1I | GGYRCC | 2 cut(s) | 620, 1436 |
| AccBSI | CCGCTC | 1 cut(s) | 2012 |
| AccI | GTMKAC | 1 cut(s) | 1510 |
| AccII | CGCG | 2 cut(s) | 2082, 3035 |
| AclI | AACGTT | 2 cut(s) | 1962, 2238 |
| AclWI | GGATC | 7 cut(s) | 364, 901, 1694, 2162, 2175, 2501, 2514 |
| AcoI | YGGCCR | 4 cut(s) | 181, 343, 2083, 2420 |
| AcsI | RAATTY | 4 cut(s) | 860, 926, 1241, 2874 |
| AcuI | CTGAAG | 4 cut(s) | 477, 1007, 1643, 2930 |
| AcvI | CACGTG | 1 cut(s) | 956 |
| AdeI | CACNNNGTG | 1 cut(s) | 1352 |
| AfaI | GTAC | 8 cut(s) | 770, 827, 1438, 1995, 2283, 2809, 2884, 2989 |
| AflIII | ACRYGT | 1 cut(s) | 2203 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1677 |
| AjiI | CACGTC | 1 cut(s) | 3110 |
| AjnI | CCWGG | 7 cut(s) | 31, 610, 1586, 2085, 2300, 2368, 2803 |
| Alw21I | GWGCWC | 5 cut(s) | 2458, 2478, 3103, 3149, 3157 |
| Alw26I | GTCTC | 5 cut(s) | 1191, 1260, 1597, 2156, 3062 |
| AlwI | GGATC | 7 cut(s) | 364, 901, 1694, 2162, 2175, 2501, 2514 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 74, 473, 1295, 2953 |
| Ama87I | CYCGRG | 2 cut(s) | 1821, 3150 |
| ApaI | GGGCCC | 1 cut(s) | 2038 |
| ApoI | RAATTY | 4 cut(s) | 860, 926, 1241, 2874 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1020, 1947 |
| Asp718I | GGTACC | 1 cut(s) | 1436 |
| AspLEI | GCGC | 4 cut(s) | 632, 1365, 2348, 2678 |
| AspS9I | GGNCC | 7 cut(s) | 248, 377, 836, 2034, 2035, 2623, 3161 |
| AsuC2I | CCSGG | 3 cut(s) | 1903, 2019, 3159 |
| AsuHPI | GGTGA | 9 cut(s) | 16, 449, 474, 480, 1136, 1639, 1999, 2153, 2825 |
| AvaI | CYCGRG | 2 cut(s) | 1821, 3150 |
| AvaII | GGWCC | 2 cut(s) | 248, 3161 |
| AxyI | CCTNAGG | 1 cut(s) | 1011 |
| BaeGI | GKGCMC | 1 cut(s) | 2038 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2799, 2832 |
| BamHI | GGATCC | 1 cut(s) | 2506 |
| BanI | GGYRCC | 2 cut(s) | 620, 1436 |
| BanII | GRGCYC | 2 cut(s) | 2038, 2478 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 809, 841 |
| BbrPI | CACGTG | 1 cut(s) | 956 |
| BbsI | GAAGAC | 2 cut(s) | 145, 471 |
| Bbv12I | GWGCWC | 5 cut(s) | 2458, 2478, 3103, 3149, 3157 |
| BbvCI | CCTCAGC | 2 cut(s) | 450, 1002 |
| BccI | CCATC | 9 cut(s) | 713, 884, 978, 982, 1171, 2395, 2472, 2603, 2769 |
| BceAI | ACGGC | 5 cut(s) | 168, 193, 330, 358, 1489 |
| BciT130I | CCWGG | 7 cut(s) | 33, 612, 1588, 2087, 2302, 2370, 2805 |
| BciVI | GTATCC | 1 cut(s) | 2191 |
| BclI | TGATCA | 2 cut(s) | 76, 747 |
| BcnI | CCSGG | 3 cut(s) | 1903, 2019, 3159 |
| BcoDI | GTCTC | 5 cut(s) | 1191, 1260, 1597, 2156, 3062 |
| BfaI | CTAG | 4 cut(s) | 974, 1062, 1121, 3229 |
| BfmI | CTRYAG | 4 cut(s) | 1056, 1936, 2602, 2860 |
| BfoI | RGCGCY | 2 cut(s) | 633, 2349 |
| BfuAI | ACCTGC | 4 cut(s) | 411, 508, 1640, 3196 |
| BfuI | GTATCC | 1 cut(s) | 2191 |
| BglII | AGATCT | 1 cut(s) | 682 |
| BmcAI | AGTACT | 2 cut(s) | 1995, 2283 |
| Bme18I | GGWCC | 2 cut(s) | 248, 3161 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1677 |
| BmeT110I | CYCGRG | 2 cut(s) | 1821, 3150 |
| BmgBI | CACGTC | 1 cut(s) | 3110 |
| BmgT120I | GGNCC | 7 cut(s) | 248, 377, 836, 2034, 2035, 2623, 3161 |
| BmrI | ACTGGG | 1 cut(s) | 2179 |
| BmuI | ACTGGG | 1 cut(s) | 2179 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1285 |
| BpiI | GAAGAC | 2 cut(s) | 145, 471 |
| BpmI | CTGGAG | 3 cut(s) | 2057, 2284, 2705 |
| Bpu10I | CCTNAGC | 3 cut(s) | 450, 1002, 1710 |
| BpuEI | CTTGAG | 4 cut(s) | 565, 2114, 2397, 2442 |
| BpuMI | CCSGG | 3 cut(s) | 1903, 2019, 3159 |
| BsaAI | YACGTR | 1 cut(s) | 956 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1296, 1390 |
| BsaI | GGTCTC | 1 cut(s) | 3062 |
| BsaWI | WCCGGW | 2 cut(s) | 365, 712 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 303, 333 |
| Bse1I | ACTGG | 9 cut(s) | 68, 504, 691, 1387, 1991, 2185, 2423, 2510, 2688 |
| Bse21I | CCTNAGG | 1 cut(s) | 1011 |
| Bse3DI | GCAATG | 2 cut(s) | 717, 2779 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1296, 1390 |
| BseBI | CCWGG | 7 cut(s) | 33, 612, 1588, 2087, 2302, 2370, 2805 |
| BseGI | GGATG | 9 cut(s) | 210, 851, 1890, 2014, 2359, 2365, 2478, 2614, 2923 |
| BseJI | GATNNNNATC | 2 cut(s) | 1296, 1390 |
| BseMI | GCAATG | 2 cut(s) | 717, 2779 |
| BseNI | ACTGG | 9 cut(s) | 68, 504, 691, 1387, 1991, 2185, 2423, 2510, 2688 |
| BseRI | GAGGAG | 8 cut(s) | 126, 129, 177, 180, 306, 534, 742, 999 |
| BseSI | GKGCMC | 1 cut(s) | 2038 |
| BseX3I | CGGCCG | 2 cut(s) | 181, 343 |
| BseYI | CCCAGC | 3 cut(s) | 437, 780, 2893 |
| BsgI | GTGCAG | 6 cut(s) | 389, 575, 671, 936, 1755, 3174 |
| Bsh1236I | CGCG | 2 cut(s) | 2082, 3035 |
| Bsh1285I | CGRYCG | 3 cut(s) | 184, 346, 2326 |
| BshNI | GGYRCC | 2 cut(s) | 620, 1436 |
| BsiEI | CGRYCG | 3 cut(s) | 184, 346, 2326 |
| BsiHKAI | GWGCWC | 5 cut(s) | 2458, 2478, 3103, 3149, 3157 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1821, 3150 |
| BsiSI | CCGG | 6 cut(s) | 366, 713, 1902, 2019, 2423, 3158 |
| BslFI | GGGAC | 5 cut(s) | 234, 297, 2283, 2533, 2935 |
| BsmAI | GTCTC | 5 cut(s) | 1191, 1260, 1597, 2156, 3062 |
| BsmBI | CGTCTC | 1 cut(s) | 2156 |
| BsmFI | GGGAC | 5 cut(s) | 234, 297, 2283, 2533, 2935 |
| Bso31I | GGTCTC | 1 cut(s) | 3062 |
| BsoBI | CYCGRG | 2 cut(s) | 1821, 3150 |
| Bsp120I | GGGCCC | 1 cut(s) | 2034 |
| Bsp1286I | GDGCHC | 6 cut(s) | 2038, 2458, 2478, 3103, 3149, 3157 |
| Bsp1407I | TGTACA | 3 cut(s) | 768, 825, 2987 |
| Bsp19I | CCATGG | 1 cut(s) | 1548 |
| BspFNI | CGCG | 2 cut(s) | 2082, 3035 |
| BspHI | TCATGA | 4 cut(s) | 1465, 1645, 1789, 2053 |
| BspMAI | CTGCAG | 1 cut(s) | 2864 |
| BspMI | ACCTGC | 4 cut(s) | 411, 508, 1640, 3196 |
| BspPI | GGATC | 7 cut(s) | 364, 901, 1694, 2162, 2175, 2501, 2514 |
| BspT107I | GGYRCC | 2 cut(s) | 620, 1436 |
| BspTNI | GGTCTC | 1 cut(s) | 3062 |
| BsrBI | CCGCTC | 1 cut(s) | 2012 |
| BsrDI | GCAATG | 2 cut(s) | 717, 2779 |
| BsrGI | TGTACA | 3 cut(s) | 768, 825, 2987 |
| BsrI | ACTGG | 9 cut(s) | 68, 504, 691, 1387, 1991, 2185, 2423, 2510, 2688 |
| BssT1I | CCWWGG | 3 cut(s) | 855, 1548, 2313 |
| Bst2UI | CCWGG | 7 cut(s) | 33, 612, 1588, 2087, 2302, 2370, 2805 |
| Bst6I | CTCTTC | 3 cut(s) | 552, 609, 812 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2240, 3023 |
| BstAUI | TGTACA | 3 cut(s) | 768, 825, 2987 |
| BstBAI | YACGTR | 1 cut(s) | 956 |
| BstDSI | CCRYGG | 5 cut(s) | 184, 346, 1351, 1548, 2080 |
| BstEII | GGTNACC | 2 cut(s) | 119, 1627 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 615, 2367 |
| BstF5I | GGATG | 9 cut(s) | 210, 851, 1890, 2014, 2359, 2365, 2478, 2614, 2923 |
| BstFNI | CGCG | 2 cut(s) | 2082, 3035 |
| BstH2I | RGCGCY | 2 cut(s) | 633, 2349 |
| BstHHI | GCGC | 4 cut(s) | 632, 1365, 2348, 2678 |
| BstMAI | GTCTC | 5 cut(s) | 1191, 1260, 1597, 2156, 3062 |
| BstMCI | CGRYCG | 3 cut(s) | 184, 346, 2326 |
| BstNI | CCWGG | 7 cut(s) | 33, 612, 1588, 2087, 2302, 2370, 2805 |
| BstNSI | RCATGY | 1 cut(s) | 2207 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1285 |
| BstPI | GGTNACC | 2 cut(s) | 119, 1627 |
| BstSFI | CTRYAG | 4 cut(s) | 1056, 1936, 2602, 2860 |
| BstSLI | GKGCMC | 1 cut(s) | 2038 |
| BstUI | CGCG | 2 cut(s) | 2082, 3035 |
| BstV2I | GAAGAC | 2 cut(s) | 145, 471 |
| BstX2I | RGATCY | 6 cut(s) | 356, 682, 1699, 2154, 2167, 2506 |
| BstYI | RGATCY | 6 cut(s) | 356, 682, 1699, 2154, 2167, 2506 |
| BstZI | CGGCCG | 2 cut(s) | 181, 343 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1011 |
| BsuI | GTATCC | 1 cut(s) | 2191 |
| BtgI | CCRYGG | 5 cut(s) | 184, 346, 1351, 1548, 2080 |
| BtgZI | GCGATG | 1 cut(s) | 1377 |
| BtrI | CACGTC | 1 cut(s) | 3110 |
| BtsCI | GGATG | 9 cut(s) | 210, 851, 1890, 2014, 2359, 2365, 2478, 2614, 2923 |
| BtsI | GCAGTG | 2 cut(s) | 828, 1226 |
| BtsIMutI | CAGTG | 9 cut(s) | 828, 1226, 1738, 1838, 2060, 2192, 2504, 2681, 3191 |
| BveI | ACCTGC | 4 cut(s) | 411, 508, 1640, 3196 |
| CaiI | CAGNNNCTG | 4 cut(s) | 74, 473, 1295, 2953 |
| CciI | TCATGA | 4 cut(s) | 1465, 1645, 1789, 2053 |
| CfoI | GCGC | 4 cut(s) | 632, 1365, 2348, 2678 |
| Cfr13I | GGNCC | 7 cut(s) | 248, 377, 836, 2034, 2035, 2623, 3161 |
| Cfr42I | CCGCGG | 1 cut(s) | 2083 |
| CseI | GACGC | 3 cut(s) | 1628, 2365, 2720 |
| CsiI | ACCWGGT | 1 cut(s) | 2803 |
| Csp6I | GTAC | 8 cut(s) | 769, 826, 1437, 1994, 2282, 2808, 2883, 2988 |
| CviQI | GTAC | 8 cut(s) | 769, 826, 1437, 1994, 2282, 2808, 2883, 2988 |
| DraI | TTTAAA | 3 cut(s) | 931, 2148, 2494 |
| DraIII | CACNNNGTG | 1 cut(s) | 1352 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 819 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1677 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 819 |
| EaeI | YGGCCR | 4 cut(s) | 181, 343, 2083, 2420 |
| EagI | CGGCCG | 2 cut(s) | 181, 343 |
| Eam1104I | CTCTTC | 3 cut(s) | 552, 609, 812 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1677 |
| EarI | CTCTTC | 3 cut(s) | 552, 609, 812 |
| Ecl136II | GAGCTC | 1 cut(s) | 2476 |
| EclXI | CGGCCG | 2 cut(s) | 181, 343 |
| Eco130I | CCWWGG | 3 cut(s) | 855, 1548, 2313 |
| Eco147I | AGGCCT | 2 cut(s) | 2672, 3181 |
| Eco24I | GRGCYC | 2 cut(s) | 2038, 2478 |
| Eco31I | GGTCTC | 1 cut(s) | 3062 |
| Eco47I | GGWCC | 2 cut(s) | 248, 3161 |
| Eco52I | CGGCCG | 2 cut(s) | 181, 343 |
| Eco53kI | GAGCTC | 1 cut(s) | 2476 |
| Eco57I | CTGAAG | 4 cut(s) | 477, 1007, 1643, 2930 |
| Eco72I | CACGTG | 1 cut(s) | 956 |
| Eco81I | CCTNAGG | 1 cut(s) | 1011 |
| Eco88I | CYCGRG | 2 cut(s) | 1821, 3150 |
| Eco91I | GGTNACC | 2 cut(s) | 119, 1627 |
| EcoICRI | GAGCTC | 1 cut(s) | 2476 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 615, 2367 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2034, 2035 |
| EcoO65I | GGTNACC | 2 cut(s) | 119, 1627 |
| EcoRI | GAATTC | 2 cut(s) | 860, 2874 |
| EcoRII | CCWGG | 7 cut(s) | 31, 610, 1586, 2085, 2300, 2368, 2803 |
| EcoT14I | CCWWGG | 3 cut(s) | 855, 1548, 2313 |
| EcoT38I | GRGCYC | 2 cut(s) | 2038, 2478 |
| ErhI | CCWWGG | 3 cut(s) | 855, 1548, 2313 |
| Esp3I | CGTCTC | 1 cut(s) | 2156 |
| FaqI | GGGAC | 5 cut(s) | 234, 297, 2283, 2533, 2935 |
| FauI | CCCGC | 5 cut(s) | 261, 387, 846, 893, 2087 |
| FauNDI | CATATG | 3 cut(s) | 430, 1359, 2977 |
| FbaI | TGATCA | 2 cut(s) | 76, 747 |
| FblI | GTMKAC | 1 cut(s) | 1510 |
| FokI | GGATG | 9 cut(s) | 217, 838, 1897, 2001, 2346, 2352, 2465, 2621, 2930 |
| FriOI | GRGCYC | 2 cut(s) | 2038, 2478 |
| FspBI | CTAG | 4 cut(s) | 974, 1062, 1121, 3229 |
| FspI | TGCGCA | 1 cut(s) | 1364 |
| GlaI | GCGC | 4 cut(s) | 631, 1364, 2347, 2677 |
| GsaI | CCCAGC | 3 cut(s) | 441, 784, 2897 |
| GsuI | CTGGAG | 3 cut(s) | 2057, 2284, 2705 |
| HaeII | RGCGCY | 2 cut(s) | 633, 2349 |
| HapII | CCGG | 6 cut(s) | 366, 713, 1902, 2019, 2423, 3158 |
| HgaI | GACGC | 3 cut(s) | 1628, 2365, 2720 |
| HhaI | GCGC | 4 cut(s) | 632, 1365, 2348, 2678 |
| Hin6I | GCGC | 4 cut(s) | 630, 1363, 2346, 2676 |
| HinP1I | GCGC | 4 cut(s) | 630, 1363, 2346, 2676 |
| HincII | GTYRAC | 4 cut(s) | 26, 445, 1456, 1876 |
| HindII | GTYRAC | 4 cut(s) | 26, 445, 1456, 1876 |
| HindIII | AAGCTT | 1 cut(s) | 1317 |
| HinfI | GANTC | 9 cut(s) | 59, 506, 736, 820, 1149, 1329, 1738, 2378, 2819 |
| HpaII | CCGG | 6 cut(s) | 366, 713, 1902, 2019, 2423, 3158 |
| HphI | GGTGA | 9 cut(s) | 16, 449, 474, 480, 1136, 1639, 1999, 2153, 2825 |
| Hpy188I | TCNGA | 6 cut(s) | 262, 496, 1158, 1291, 3044, 3076 |
| Hpy99I | CGWCG | 2 cut(s) | 629, 1932 |
| HpyCH4IV | ACGT | 7 cut(s) | 318, 955, 1081, 1657, 1962, 2238, 3109 |
| HpySE526I | ACGT | 7 cut(s) | 318, 955, 1081, 1657, 1962, 2238, 3109 |
| HspAI | GCGC | 4 cut(s) | 630, 1363, 2346, 2676 |
| KpnI | GGTACC | 1 cut(s) | 1440 |
| Ksp22I | TGATCA | 2 cut(s) | 76, 747 |
| KspI | CCGCGG | 1 cut(s) | 2083 |
| MabI | ACCWGGT | 1 cut(s) | 2803 |
| MaeI | CTAG | 4 cut(s) | 974, 1062, 1121, 3229 |
| MaeII | ACGT | 7 cut(s) | 318, 955, 1081, 1657, 1962, 2238, 3109 |
| MbiI | CCGCTC | 1 cut(s) | 2012 |
| MfeI | CAATTG | 5 cut(s) | 1283, 1499, 1879, 2391, 2778 |
| MflI | RGATCY | 6 cut(s) | 356, 682, 1699, 2154, 2167, 2506 |
| MhlI | GDGCHC | 6 cut(s) | 2038, 2458, 2478, 3103, 3149, 3157 |
| MlyI | GAGTC | 3 cut(s) | 515, 829, 2813 |
| MmeI | TCCRAC | 2 cut(s) | 1193, 1807 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1020, 1947 |
| MseI | TTAA | 8 cut(s) | 930, 1388, 1725, 1782, 1980, 2147, 2195, 2493 |
| MslI | CAYNNNNRTG | 3 cut(s) | 693, 2904, 3108 |
| MspA1I | CMGCKG | 4 cut(s) | 324, 757, 2082, 2399 |
| MspI | CCGG | 6 cut(s) | 366, 713, 1902, 2019, 2423, 3158 |
| MssI | GTTTAAAC | 1 cut(s) | 2494 |
| MunI | CAATTG | 5 cut(s) | 1283, 1499, 1879, 2391, 2778 |
| MvaI | CCWGG | 7 cut(s) | 33, 612, 1588, 2087, 2302, 2370, 2805 |
| MvnI | CGCG | 2 cut(s) | 2082, 3035 |
| NciI | CCSGG | 3 cut(s) | 1903, 2019, 3159 |
| NcoI | CCATGG | 1 cut(s) | 1548 |
| NdeI | CATATG | 3 cut(s) | 430, 1359, 2977 |
| NmuCI | GTSAC | 5 cut(s) | 1627, 2005, 2353, 2707, 2831 |
| NsbI | TGCGCA | 1 cut(s) | 1364 |
| NspI | RCATGY | 1 cut(s) | 2207 |
| PaeR7I | CTCGAG | 2 cut(s) | 1821, 3150 |
| PagI | TCATGA | 4 cut(s) | 1465, 1645, 1789, 2053 |
| PceI | AGGCCT | 2 cut(s) | 2672, 3181 |
| PciI | ACATGT | 1 cut(s) | 2203 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3148 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1020, 1947 |
| PfeI | GAWTC | 6 cut(s) | 59, 736, 1149, 1329, 1738, 2378 |
| PflFI | GACNNNGTC | 1 cut(s) | 2524 |
| PfoI | TCCNGGA | 1 cut(s) | 1586 |
| PleI | GAGTC | 3 cut(s) | 514, 828, 2813 |
| PmaCI | CACGTG | 1 cut(s) | 956 |
| PmeI | GTTTAAAC | 1 cut(s) | 2494 |
| PmlI | CACGTG | 1 cut(s) | 956 |
| PpsI | GAGTC | 3 cut(s) | 514, 828, 2813 |
| Ppu21I | YACGTR | 1 cut(s) | 956 |
| PscI | ACATGT | 1 cut(s) | 2203 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1285 |
| PsiI | TTATAA | 1 cut(s) | 1487 |
| Psp124BI | GAGCTC | 1 cut(s) | 2478 |
| Psp1406I | AACGTT | 2 cut(s) | 1962, 2238 |
| Psp6I | CCWGG | 7 cut(s) | 31, 610, 1586, 2085, 2300, 2368, 2803 |
| PspCI | CACGTG | 1 cut(s) | 956 |
| PspEI | GGTNACC | 2 cut(s) | 119, 1627 |
| PspFI | CCCAGC | 3 cut(s) | 437, 780, 2893 |
| PspGI | CCWGG | 7 cut(s) | 31, 610, 1586, 2085, 2300, 2368, 2803 |
| PspOMI | GGGCCC | 1 cut(s) | 2034 |
| PspPI | GGNCC | 7 cut(s) | 248, 377, 836, 2034, 2035, 2623, 3161 |
| PspXI | VCTCGAGB | 2 cut(s) | 1821, 3150 |
| PstI | CTGCAG | 1 cut(s) | 2864 |
| PstNI | CAGNNNCTG | 4 cut(s) | 74, 473, 1295, 2953 |
| PsuI | RGATCY | 6 cut(s) | 356, 682, 1699, 2154, 2167, 2506 |
| PsyI | GACNNNGTC | 1 cut(s) | 2524 |
| PvuII | CAGCTG | 2 cut(s) | 757, 2399 |
| RsaI | GTAC | 8 cut(s) | 770, 827, 1438, 1995, 2283, 2809, 2884, 2989 |
| RsaNI | GTAC | 8 cut(s) | 769, 826, 1437, 1994, 2282, 2808, 2883, 2988 |
| RseI | CAYNNNNRTG | 3 cut(s) | 693, 2904, 3108 |
| SacI | GAGCTC | 1 cut(s) | 2478 |
| SacII | CCGCGG | 1 cut(s) | 2083 |
| SaqAI | TTAA | 8 cut(s) | 930, 1388, 1725, 1782, 1980, 2147, 2195, 2493 |
| Sau96I | GGNCC | 7 cut(s) | 248, 377, 836, 2034, 2035, 2623, 3161 |
| ScaI | AGTACT | 2 cut(s) | 1995, 2283 |
| SchI | GAGTC | 3 cut(s) | 515, 829, 2813 |
| SduI | GDGCHC | 6 cut(s) | 2038, 2458, 2478, 3103, 3149, 3157 |
| SexAI | ACCWGGT | 1 cut(s) | 2803 |
| SfcI | CTRYAG | 4 cut(s) | 1056, 1936, 2602, 2860 |
| Sfr274I | CTCGAG | 2 cut(s) | 1821, 3150 |
| Sfr303I | CCGCGG | 1 cut(s) | 2083 |
| SgrBI | CCGCGG | 1 cut(s) | 2083 |
| SinI | GGWCC | 2 cut(s) | 248, 3161 |
| SlaI | CTCGAG | 2 cut(s) | 1821, 3150 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 693, 2904, 3108 |
| SmlI | CTYRAG | 6 cut(s) | 580, 1821, 2093, 2412, 2457, 3150 |
| SmoI | CTYRAG | 6 cut(s) | 580, 1821, 2093, 2412, 2457, 3150 |
| SseBI | AGGCCT | 2 cut(s) | 2672, 3181 |
| SspI | AATATT | 1 cut(s) | 1195 |
| SspMI | CTAG | 4 cut(s) | 974, 1062, 1121, 3229 |
| SstI | GAGCTC | 1 cut(s) | 2478 |
| StuI | AGGCCT | 2 cut(s) | 2672, 3181 |
| StyI | CCWWGG | 3 cut(s) | 855, 1548, 2313 |
| TaiI | ACGT | 7 cut(s) | 321, 958, 1084, 1660, 1965, 2241, 3112 |
| TaqI | TCGA | 7 cut(s) | 301, 725, 1032, 1264, 1822, 2028, 3151 |
| TatI | WGTACW | 5 cut(s) | 768, 825, 1993, 2281, 2987 |
| TauI | GCSGC | 5 cut(s) | 180, 183, 2085, 2892, 3038 |
| TfiI | GAWTC | 6 cut(s) | 59, 736, 1149, 1329, 1738, 2378 |
| Tru1I | TTAA | 8 cut(s) | 930, 1388, 1725, 1782, 1980, 2147, 2195, 2493 |
| Tru9I | TTAA | 8 cut(s) | 930, 1388, 1725, 1782, 1980, 2147, 2195, 2493 |
| TscAI | CASTG | 9 cut(s) | 835, 1233, 1738, 1838, 2067, 2192, 2504, 2688, 3198 |
| TseFI | GTSAC | 5 cut(s) | 1627, 2005, 2353, 2707, 2831 |
| Tsp45I | GTSAC | 5 cut(s) | 1627, 2005, 2353, 2707, 2831 |
| TspGWI | ACGGA | 5 cut(s) | 825, 829, 2180, 2287, 3157 |
| TspRI | CASTG | 9 cut(s) | 835, 1233, 1738, 1838, 2067, 2192, 2504, 2688, 3198 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2524 |
| VpaK11BI | GGWCC | 2 cut(s) | 248, 3161 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 615, 2367 |
| XapI | RAATTY | 4 cut(s) | 860, 926, 1241, 2874 |
| XbaI | TCTAGA | 1 cut(s) | 973 |
| XceI | RCATGY | 1 cut(s) | 2207 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 131, 1823 |
| XhoI | CTCGAG | 2 cut(s) | 1821, 3150 |
| XmiI | GTMKAC | 1 cut(s) | 1510 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1020, 1947 |
| XspI | CTAG | 4 cut(s) | 974, 1062, 1121, 3229 |
| ZrmI | AGTACT | 2 cut(s) | 1995, 2283 |