Belongs to the argonaute family
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1373 |
| Acc36I | ACCTGC | 1 cut(s) | 2118 |
| Acc65I | GGTACC | 1 cut(s) | 2061 |
| AccB1I | GGYRCC | 3 cut(s) | 589, 2061, 2745 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2018 |
| AccI | GTMKAC | 2 cut(s) | 811, 842 |
| AccII | CGCG | 2 cut(s) | 1056, 3151 |
| AclWI | GGATC | 4 cut(s) | 2174, 2513, 2526, 3103 |
| AcoI | YGGCCR | 5 cut(s) | 136, 190, 343, 1087, 2432 |
| AcsI | RAATTY | 4 cut(s) | 935, 953, 2166, 2886 |
| AcuI | CTGAAG | 3 cut(s) | 111, 498, 1016 |
| AcvI | CACGTG | 1 cut(s) | 965 |
| AdeI | CACNNNGTG | 2 cut(s) | 1133, 3170 |
| AflII | CTTAAG | 1 cut(s) | 1631 |
| AflIII | ACRYGT | 1 cut(s) | 2215 |
| AgeI | ACCGGT | 2 cut(s) | 583, 1485 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1686 |
| AjiI | CACGTC | 1 cut(s) | 3122 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 783, 815 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1410, 1442 |
| Alw21I | GWGCWC | 7 cut(s) | 565, 2026, 2470, 2490, 3061, 3158, 3166 |
| Alw26I | GTCTC | 6 cut(s) | 54, 992, 1200, 1606, 2168, 3074 |
| Alw44I | GTGCAC | 1 cut(s) | 561 |
| AlwI | GGATC | 4 cut(s) | 2174, 2513, 2526, 3103 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1267, 2183, 2500 |
| Ama87I | CYCGRG | 1 cut(s) | 392 |
| ApaI | GGGCCC | 1 cut(s) | 228 |
| ApaLI | GTGCAC | 1 cut(s) | 561 |
| ApoI | RAATTY | 4 cut(s) | 935, 953, 2166, 2886 |
| AseI | ATTAAT | 1 cut(s) | 1905 |
| AsiGI | ACCGGT | 2 cut(s) | 583, 1485 |
| Asp718I | GGTACC | 1 cut(s) | 2061 |
| AspLEI | GCGC | 5 cut(s) | 1030, 1056, 1374, 1650, 2604 |
| AsuC2I | CCSGG | 1 cut(s) | 1939 |
| AsuHPI | GGTGA | 6 cut(s) | 16, 451, 787, 1145, 1630, 2165 |
| AvaI | CYCGRG | 1 cut(s) | 392 |
| AvaII | GGWCC | 7 cut(s) | 143, 290, 353, 908, 1941, 2497, 3146 |
| BaeGI | GKGCMC | 2 cut(s) | 228, 565 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2811, 2844 |
| BalI | TGGCCA | 1 cut(s) | 2434 |
| BamHI | GGATCC | 1 cut(s) | 2518 |
| BanI | GGYRCC | 3 cut(s) | 589, 2061, 2745 |
| BanII | GRGCYC | 4 cut(s) | 228, 2026, 2490, 3061 |
| BbrPI | CACGTG | 1 cut(s) | 965 |
| BbsI | GAAGAC | 1 cut(s) | 1126 |
| Bbv12I | GWGCWC | 7 cut(s) | 565, 2026, 2470, 2490, 3061, 3158, 3166 |
| BccI | CCATC | 8 cut(s) | 757, 804, 818, 899, 1180, 2379, 2407, 3048 |
| BceAI | ACGGC | 8 cut(s) | 123, 168, 177, 330, 1074, 1219, 2759, 2886 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 290, 324, 1534, 1568, 2651, 2685 |
| BciVI | GTATCC | 1 cut(s) | 2203 |
| BclI | TGATCA | 1 cut(s) | 2032 |
| BcnI | CCSGG | 1 cut(s) | 1939 |
| BcoDI | GTCTC | 6 cut(s) | 54, 992, 1200, 1606, 2168, 3074 |
| BfaI | CTAG | 4 cut(s) | 30, 567, 1071, 2058 |
| BfmI | CTRYAG | 3 cut(s) | 2872, 2957, 3180 |
| BfoI | RGCGCY | 2 cut(s) | 1031, 1651 |
| BfrI | CTTAAG | 1 cut(s) | 1631 |
| BfuAI | ACCTGC | 1 cut(s) | 2118 |
| BfuI | GTATCC | 1 cut(s) | 2203 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 189 |
| BmcAI | AGTACT | 2 cut(s) | 1469, 2295 |
| Bme18I | GGWCC | 7 cut(s) | 143, 290, 353, 908, 1941, 2497, 3146 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1686 |
| BmeT110I | CYCGRG | 1 cut(s) | 392 |
| BmgBI | CACGTC | 1 cut(s) | 3122 |
| BmrI | ACTGGG | 2 cut(s) | 407, 2191 |
| BmsI | GCATC | 6 cut(s) | 1003, 2059, 2293, 2613, 2659, 2987 |
| BmuI | ACTGGG | 2 cut(s) | 407, 2191 |
| BpiI | GAAGAC | 1 cut(s) | 1126 |
| Bpu10I | CCTNAGC | 3 cut(s) | 507, 1722, 1758 |
| BpuEI | CTTGAG | 4 cut(s) | 580, 1005, 2454, 3188 |
| BpuMI | CCSGG | 1 cut(s) | 1939 |
| Bsa29I | ATCGAT | 1 cut(s) | 1711 |
| BsaAI | YACGTR | 2 cut(s) | 965, 2988 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1305 |
| BsaI | GGTCTC | 1 cut(s) | 992 |
| BsaWI | WCCGGW | 2 cut(s) | 583, 1485 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1329, 1359, 1869, 1899 |
| Bse118I | RCCGGY | 5 cut(s) | 58, 145, 583, 848, 1485 |
| Bse1I | ACTGG | 9 cut(s) | 413, 646, 706, 1241, 1813, 2197, 2435, 2545, 3105 |
| Bse3DI | GCAATG | 1 cut(s) | 2079 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1305 |
| BseCI | ATCGAT | 1 cut(s) | 1711 |
| BseGI | GGATG | 6 cut(s) | 494, 2371, 2377, 2490, 2845, 2935 |
| BseJI | GATNNNNATC | 1 cut(s) | 1305 |
| BseMI | GCAATG | 1 cut(s) | 2079 |
| BseMII | CTCAG | 6 cut(s) | 311, 398, 498, 1196, 1772, 2537 |
| BseNI | ACTGG | 9 cut(s) | 413, 646, 706, 1241, 1813, 2197, 2435, 2545, 3105 |
| BseRI | GAGGAG | 1 cut(s) | 28 |
| BseSI | GKGCMC | 2 cut(s) | 228, 565 |
| BseYI | CCCAGC | 3 cut(s) | 62, 78, 498 |
| BsgI | GTGCAG | 2 cut(s) | 383, 1767 |
| Bsh1236I | CGCG | 2 cut(s) | 1056, 3151 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1544 |
| BshNI | GGYRCC | 3 cut(s) | 589, 2061, 2745 |
| BshTI | ACCGGT | 2 cut(s) | 583, 1485 |
| BshVI | ATCGAT | 1 cut(s) | 1711 |
| BsiEI | CGRYCG | 1 cut(s) | 1544 |
| BsiHKAI | GWGCWC | 7 cut(s) | 565, 2026, 2470, 2490, 3061, 3158, 3166 |
| BsiHKCI | CYCGRG | 1 cut(s) | 392 |
| BslFI | GGGAC | 3 cut(s) | 109, 1065, 2633 |
| BsmAI | GTCTC | 6 cut(s) | 54, 992, 1200, 1606, 2168, 3074 |
| BsmFI | GGGAC | 3 cut(s) | 109, 1065, 2633 |
| BsmI | GAATGC | 1 cut(s) | 3050 |
| Bso31I | GGTCTC | 1 cut(s) | 992 |
| BsoBI | CYCGRG | 1 cut(s) | 392 |
| Bsp120I | GGGCCC | 1 cut(s) | 224 |
| Bsp1286I | GDGCHC | 8 cut(s) | 228, 565, 2026, 2470, 2490, 3061, 3158, 3166 |
| Bsp1407I | TGTACA | 2 cut(s) | 653, 783 |
| Bsp143I | GATC | 7 cut(s) | 1306, 1708, 1712, 2032, 2179, 2518, 3095 |
| Bsp19I | CCATGG | 2 cut(s) | 1557, 3129 |
| BspCNI | CTCAG | 6 cut(s) | 310, 397, 499, 1195, 1771, 2536 |
| BspDI | ATCGAT | 1 cut(s) | 1711 |
| BspFNI | CGCG | 2 cut(s) | 1056, 3151 |
| BspHI | TCATGA | 3 cut(s) | 52, 1654, 1801 |
| BspMAI | CTGCAG | 3 cut(s) | 2876, 2961, 3184 |
| BspMI | ACCTGC | 1 cut(s) | 2118 |
| BspPI | GGATC | 4 cut(s) | 2174, 2513, 2526, 3103 |
| BspQI | GCTCTTC | 1 cut(s) | 1335 |
| BspT107I | GGYRCC | 3 cut(s) | 589, 2061, 2745 |
| BspTI | CTTAAG | 1 cut(s) | 1631 |
| BspTNI | GGTCTC | 1 cut(s) | 992 |
| BsrDI | GCAATG | 1 cut(s) | 2079 |
| BsrFI | RCCGGY | 5 cut(s) | 58, 145, 583, 848, 1485 |
| BsrGI | TGTACA | 2 cut(s) | 653, 783 |
| BsrI | ACTGG | 9 cut(s) | 413, 646, 706, 1241, 1813, 2197, 2435, 2545, 3105 |
| BssAI | RCCGGY | 5 cut(s) | 58, 145, 583, 848, 1485 |
| BssMI | GATC | 7 cut(s) | 1306, 1708, 1712, 2032, 2179, 2518, 3095 |
| BssNAI | GTATAC | 1 cut(s) | 843 |
| BssT1I | CCWWGG | 5 cut(s) | 130, 424, 1557, 2694, 3129 |
| Bst1107I | GTATAC | 1 cut(s) | 843 |
| Bst6I | CTCTTC | 2 cut(s) | 5, 1335 |
| BstAFI | CTTAAG | 1 cut(s) | 1631 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 965, 2252, 3170, 3179 |
| BstAUI | TGTACA | 2 cut(s) | 653, 783 |
| BstBAI | YACGTR | 2 cut(s) | 965, 2988 |
| BstC8I | GCNNGC | 9 cut(s) | 84, 190, 534, 850, 1008, 1407, 1829, 2455, 3198 |
| BstDEI | CTNAG | 7 cut(s) | 297, 384, 507, 1182, 1722, 1758, 2523 |
| BstDSI | CCRYGG | 6 cut(s) | 139, 193, 346, 1557, 3129, 3149 |
| BstEII | GGTNACC | 2 cut(s) | 457, 1636 |
| BstENI | CCTNNNNNAGG | 4 cut(s) | 423, 450, 869, 2379 |
| BstF5I | GGATG | 6 cut(s) | 494, 2371, 2377, 2490, 2845, 2935 |
| BstFNI | CGCG | 2 cut(s) | 1056, 3151 |
| BstH2I | RGCGCY | 2 cut(s) | 1031, 1651 |
| BstHHI | GCGC | 5 cut(s) | 1030, 1056, 1374, 1650, 2604 |
| BstKTI | GATC | 7 cut(s) | 1309, 1711, 1715, 2035, 2182, 2521, 3098 |
| BstMAI | GTCTC | 6 cut(s) | 54, 992, 1200, 1606, 2168, 3074 |
| BstMBI | GATC | 7 cut(s) | 1306, 1708, 1712, 2032, 2179, 2518, 3095 |
| BstMCI | CGRYCG | 1 cut(s) | 1544 |
| BstNSI | RCATGY | 1 cut(s) | 86 |
| BstPI | GGTNACC | 2 cut(s) | 457, 1636 |
| BstSFI | CTRYAG | 3 cut(s) | 2872, 2957, 3180 |
| BstSLI | GKGCMC | 2 cut(s) | 228, 565 |
| BstSNI | TACGTA | 1 cut(s) | 2988 |
| BstUI | CGCG | 2 cut(s) | 1056, 3151 |
| BstV2I | GAAGAC | 1 cut(s) | 1126 |
| BstX2I | RGATCY | 2 cut(s) | 2179, 2518 |
| BstYI | RGATCY | 2 cut(s) | 2179, 2518 |
| BstZ17I | GTATAC | 1 cut(s) | 843 |
| Bsu15I | ATCGAT | 1 cut(s) | 1711 |
| BsuI | GTATCC | 1 cut(s) | 2203 |
| BsuTUI | ATCGAT | 1 cut(s) | 1711 |
| BtgI | CCRYGG | 6 cut(s) | 139, 193, 346, 1557, 3129, 3149 |
| BtgZI | GCGATG | 1 cut(s) | 2462 |
| BtrI | CACGTC | 1 cut(s) | 3122 |
| BtsCI | GGATG | 6 cut(s) | 494, 2371, 2377, 2490, 2845, 2935 |
| BtsI | GCAGTG | 1 cut(s) | 3189 |
| BveI | ACCTGC | 1 cut(s) | 2118 |
| Cac8I | GCNNGC | 9 cut(s) | 84, 190, 534, 850, 1008, 1407, 1829, 2455, 3198 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1267, 2183, 2500 |
| CciI | TCATGA | 3 cut(s) | 52, 1654, 1801 |
| CfoI | GCGC | 5 cut(s) | 1030, 1056, 1374, 1650, 2604 |
| Cfr10I | RCCGGY | 5 cut(s) | 58, 145, 583, 848, 1485 |
| Cfr42I | CCGCGG | 1 cut(s) | 3152 |
| ClaI | ATCGAT | 1 cut(s) | 1711 |
| CsiI | ACCWGGT | 3 cut(s) | 2753, 2815, 3166 |
| CspAI | ACCGGT | 2 cut(s) | 583, 1485 |
| DdeI | CTNAG | 7 cut(s) | 297, 384, 507, 1182, 1722, 1758, 2523 |
| DpnI | GATC | 7 cut(s) | 1308, 1710, 1714, 2034, 2181, 2520, 3097 |
| DpnII | GATC | 7 cut(s) | 1306, 1708, 1712, 2032, 2179, 2518, 3095 |
| DraI | TTTAAA | 1 cut(s) | 880 |
| DraIII | CACNNNGTG | 2 cut(s) | 1133, 3170 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1686 |
| EaeI | YGGCCR | 5 cut(s) | 136, 190, 343, 1087, 2432 |
| Eam1104I | CTCTTC | 2 cut(s) | 5, 1335 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1686 |
| EarI | CTCTTC | 2 cut(s) | 5, 1335 |
| EciI | GGCGGA | 2 cut(s) | 90, 2295 |
| Ecl136II | GAGCTC | 3 cut(s) | 2024, 2488, 3059 |
| Eco105I | TACGTA | 1 cut(s) | 2988 |
| Eco130I | CCWWGG | 5 cut(s) | 130, 424, 1557, 2694, 3129 |
| Eco147I | AGGCCT | 1 cut(s) | 2048 |
| Eco24I | GRGCYC | 4 cut(s) | 228, 2026, 2490, 3061 |
| Eco31I | GGTCTC | 1 cut(s) | 992 |
| Eco47I | GGWCC | 7 cut(s) | 143, 290, 353, 908, 1941, 2497, 3146 |
| Eco53kI | GAGCTC | 3 cut(s) | 2024, 2488, 3059 |
| Eco57I | CTGAAG | 3 cut(s) | 111, 498, 1016 |
| Eco72I | CACGTG | 1 cut(s) | 965 |
| Eco88I | CYCGRG | 1 cut(s) | 392 |
| Eco91I | GGTNACC | 2 cut(s) | 457, 1636 |
| EcoICRI | GAGCTC | 3 cut(s) | 2024, 2488, 3059 |
| EcoNI | CCTNNNNNAGG | 4 cut(s) | 423, 450, 869, 2379 |
| EcoO109I | RGGNCCY | 3 cut(s) | 225, 2497, 3189 |
| EcoO65I | GGTNACC | 2 cut(s) | 457, 1636 |
| EcoRI | GAATTC | 1 cut(s) | 2886 |
| EcoT14I | CCWWGG | 5 cut(s) | 130, 424, 1557, 2694, 3129 |
| EcoT38I | GRGCYC | 4 cut(s) | 228, 2026, 2490, 3061 |
| ErhI | CCWWGG | 5 cut(s) | 130, 424, 1557, 2694, 3129 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1014, 1046 |
| FaqI | GGGAC | 3 cut(s) | 109, 1065, 2633 |
| FauI | CCCGC | 1 cut(s) | 624 |
| FbaI | TGATCA | 1 cut(s) | 2032 |
| FblI | GTMKAC | 2 cut(s) | 811, 842 |
| FokI | GGATG | 6 cut(s) | 481, 2358, 2364, 2477, 2832, 2942 |
| FriOI | GRGCYC | 4 cut(s) | 228, 2026, 2490, 3061 |
| FspBI | CTAG | 4 cut(s) | 30, 567, 1071, 2058 |
| FspI | TGCGCA | 1 cut(s) | 1373 |
| GlaI | GCGC | 5 cut(s) | 1029, 1055, 1373, 1649, 2603 |
| GsaI | CCCAGC | 3 cut(s) | 66, 82, 502 |
| HaeII | RGCGCY | 2 cut(s) | 1031, 1651 |
| HhaI | GCGC | 5 cut(s) | 1030, 1056, 1374, 1650, 2604 |
| Hin6I | GCGC | 5 cut(s) | 1028, 1054, 1372, 1648, 2602 |
| HinP1I | GCGC | 5 cut(s) | 1028, 1054, 1372, 1648, 2602 |
| HincII | GTYRAC | 1 cut(s) | 2794 |
| HindII | GTYRAC | 1 cut(s) | 2794 |
| HphI | GGTGA | 6 cut(s) | 16, 451, 787, 1145, 1630, 2165 |
| Hpy99I | CGWCG | 1 cut(s) | 1405 |
| HpyCH4IV | ACGT | 9 cut(s) | 714, 808, 964, 1400, 2118, 2217, 2317, 2987, 3121 |
| HpyF3I | CTNAG | 7 cut(s) | 297, 384, 507, 1182, 1722, 1758, 2523 |
| HpySE526I | ACGT | 9 cut(s) | 714, 808, 964, 1400, 2118, 2217, 2317, 2987, 3121 |
| HspAI | GCGC | 5 cut(s) | 1028, 1054, 1372, 1648, 2602 |
| KpnI | GGTACC | 1 cut(s) | 2065 |
| KroI | GCCGGC | 1 cut(s) | 848 |
| KroNI | GCCGGC | 1 cut(s) | 850 |
| Ksp22I | TGATCA | 1 cut(s) | 2032 |
| KspI | CCGCGG | 1 cut(s) | 3152 |
| Kzo9I | GATC | 7 cut(s) | 1306, 1708, 1712, 2032, 2179, 2518, 3095 |
| LguI | GCTCTTC | 1 cut(s) | 1335 |
| LweI | GCATC | 6 cut(s) | 1003, 2059, 2293, 2613, 2659, 2987 |
| MabI | ACCWGGT | 3 cut(s) | 2753, 2815, 3166 |
| MaeI | CTAG | 4 cut(s) | 30, 567, 1071, 2058 |
| MaeII | ACGT | 9 cut(s) | 714, 808, 964, 1400, 2118, 2217, 2317, 2987, 3121 |
| MalI | GATC | 7 cut(s) | 1308, 1710, 1714, 2034, 2181, 2520, 3097 |
| MboI | GATC | 7 cut(s) | 1306, 1708, 1712, 2032, 2179, 2518, 3095 |
| MboII | GAAGA | 6 cut(s) | 22, 1131, 1322, 1718, 1769, 2272 |
| MfeI | CAATTG | 2 cut(s) | 1891, 2403 |
| MflI | RGATCY | 2 cut(s) | 2179, 2518 |
| MhlI | GDGCHC | 8 cut(s) | 228, 565, 2026, 2470, 2490, 3061, 3158, 3166 |
| MlsI | TGGCCA | 1 cut(s) | 2434 |
| MluNI | TGGCCA | 1 cut(s) | 2434 |
| MlyI | GAGTC | 6 cut(s) | 56, 91, 289, 1174, 1347, 2825 |
| MmeI | TCCRAC | 3 cut(s) | 1202, 1507, 2873 |
| Mox20I | TGGCCA | 1 cut(s) | 2434 |
| MroNI | GCCGGC | 1 cut(s) | 848 |
| MscI | TGGCCA | 1 cut(s) | 2434 |
| MseI | TTAA | 5 cut(s) | 879, 1397, 1632, 1905, 2051 |
| MslI | CAYNNNNRTG | 2 cut(s) | 708, 2916 |
| Msp20I | TGGCCA | 1 cut(s) | 2434 |
| MspA1I | CMGCKG | 4 cut(s) | 772, 2948, 3093, 3151 |
| MspCI | CTTAAG | 1 cut(s) | 1631 |
| MunI | CAATTG | 2 cut(s) | 1891, 2403 |
| Mva1269I | GAATGC | 1 cut(s) | 3050 |
| MvnI | CGCG | 2 cut(s) | 1056, 3151 |
| NaeI | GCCGGC | 1 cut(s) | 850 |
| NciI | CCSGG | 1 cut(s) | 1939 |
| NcoI | CCATGG | 2 cut(s) | 1557, 3129 |
| NdeII | GATC | 7 cut(s) | 1306, 1708, 1712, 2032, 2179, 2518, 3095 |
| NgoMIV | GCCGGC | 1 cut(s) | 848 |
| NsbI | TGCGCA | 1 cut(s) | 1373 |
| NspI | RCATGY | 1 cut(s) | 86 |
| PaeI | GCATGC | 1 cut(s) | 86 |
| PagI | TCATGA | 3 cut(s) | 52, 1654, 1801 |
| PasI | CCCWGGG | 1 cut(s) | 154 |
| PceI | AGGCCT | 1 cut(s) | 2048 |
| PciSI | GCTCTTC | 1 cut(s) | 1335 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1684 |
| PctI | GAATGC | 1 cut(s) | 3050 |
| PdiI | GCCGGC | 1 cut(s) | 850 |
| PfeI | GAWTC | 7 cut(s) | 791, 1270, 1301, 1734, 1750, 2390, 2674 |
| PflFI | GACNNNGTC | 1 cut(s) | 2624 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2018 |
| PfoI | TCCNGGA | 2 cut(s) | 2493, 3115 |
| PinAI | ACCGGT | 2 cut(s) | 583, 1485 |
| PleI | GAGTC | 6 cut(s) | 55, 91, 289, 1174, 1346, 2825 |
| PmaCI | CACGTG | 1 cut(s) | 965 |
| PmlI | CACGTG | 1 cut(s) | 965 |
| PpsI | GAGTC | 6 cut(s) | 55, 91, 289, 1174, 1346, 2825 |
| Ppu21I | YACGTR | 2 cut(s) | 965, 2988 |
| PpuMI | RGGWCCY | 1 cut(s) | 2497 |
| PshBI | ATTAAT | 1 cut(s) | 1905 |
| Psp124BI | GAGCTC | 3 cut(s) | 2026, 2490, 3061 |
| Psp5II | RGGWCCY | 1 cut(s) | 2497 |
| PspCI | CACGTG | 1 cut(s) | 965 |
| PspEI | GGTNACC | 2 cut(s) | 457, 1636 |
| PspFI | CCCAGC | 3 cut(s) | 62, 78, 498 |
| PspOMI | GGGCCC | 1 cut(s) | 224 |
| PspPPI | RGGWCCY | 1 cut(s) | 2497 |
| PstI | CTGCAG | 3 cut(s) | 2876, 2961, 3184 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1267, 2183, 2500 |
| PsuI | RGATCY | 2 cut(s) | 2179, 2518 |
| PsyI | GACNNNGTC | 1 cut(s) | 2624 |
| PvuII | CAGCTG | 2 cut(s) | 772, 2948 |
| RseI | CAYNNNNRTG | 2 cut(s) | 708, 2916 |
| SacI | GAGCTC | 3 cut(s) | 2026, 2490, 3061 |
| SacII | CCGCGG | 1 cut(s) | 3152 |
| SapI | GCTCTTC | 1 cut(s) | 1335 |
| SaqAI | TTAA | 5 cut(s) | 879, 1397, 1632, 1905, 2051 |
| Sau3AI | GATC | 7 cut(s) | 1306, 1708, 1712, 2032, 2179, 2518, 3095 |
| ScaI | AGTACT | 2 cut(s) | 1469, 2295 |
| SchI | GAGTC | 6 cut(s) | 56, 91, 289, 1174, 1347, 2825 |
| SduI | GDGCHC | 8 cut(s) | 228, 565, 2026, 2470, 2490, 3061, 3158, 3166 |
| SexAI | ACCWGGT | 3 cut(s) | 2753, 2815, 3166 |
| SfaNI | GCATC | 6 cut(s) | 1003, 2059, 2293, 2613, 2659, 2987 |
| SfcI | CTRYAG | 3 cut(s) | 2872, 2957, 3180 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 189 |
| Sfr303I | CCGCGG | 1 cut(s) | 3152 |
| SgrBI | CCGCGG | 1 cut(s) | 3152 |
| SinI | GGWCC | 7 cut(s) | 143, 290, 353, 908, 1941, 2497, 3146 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 708, 2916 |
| SmlI | CTYRAG | 5 cut(s) | 595, 1020, 1631, 2469, 3203 |
| SmoI | CTYRAG | 5 cut(s) | 595, 1020, 1631, 2469, 3203 |
| SnaBI | TACGTA | 1 cut(s) | 2988 |
| SphI | GCATGC | 1 cut(s) | 86 |
| SseBI | AGGCCT | 1 cut(s) | 2048 |
| SspI | AATATT | 1 cut(s) | 1204 |
| SspMI | CTAG | 4 cut(s) | 30, 567, 1071, 2058 |
| SstI | GAGCTC | 3 cut(s) | 2026, 2490, 3061 |
| StuI | AGGCCT | 1 cut(s) | 2048 |
| StyI | CCWWGG | 5 cut(s) | 130, 424, 1557, 2694, 3129 |
| TaiI | ACGT | 9 cut(s) | 717, 811, 967, 1403, 2121, 2220, 2320, 2990, 3124 |
| TaqI | TCGA | 3 cut(s) | 1578, 1711, 2026 |
| TaqII | GACCGA | 2 cut(s) | 307, 1558 |
| TatI | WGTACW | 4 cut(s) | 653, 783, 1467, 2293 |
| TauI | GCSGC | 3 cut(s) | 205, 505, 2411 |
| TfiI | GAWTC | 7 cut(s) | 791, 1270, 1301, 1734, 1750, 2390, 2674 |
| Tru1I | TTAA | 5 cut(s) | 879, 1397, 1632, 1905, 2051 |
| Tru9I | TTAA | 5 cut(s) | 879, 1397, 1632, 1905, 2051 |
| TspGWI | ACGGA | 1 cut(s) | 2564 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2624 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2018 |
| Vha464I | CTTAAG | 1 cut(s) | 1631 |
| VneI | GTGCAC | 1 cut(s) | 561 |
| VpaK11BI | GGWCC | 7 cut(s) | 143, 290, 353, 908, 1941, 2497, 3146 |
| VspI | ATTAAT | 1 cut(s) | 1905 |
| XagI | CCTNNNNNAGG | 4 cut(s) | 423, 450, 869, 2379 |
| XapI | RAATTY | 4 cut(s) | 935, 953, 2166, 2886 |
| XceI | RCATGY | 1 cut(s) | 86 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 137, 161 |
| XmiI | GTMKAC | 2 cut(s) | 811, 842 |
| XspI | CTAG | 4 cut(s) | 30, 567, 1071, 2058 |
| ZrmI | AGTACT | 2 cut(s) | 1469, 2295 |