Belongs to the argonaute family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Gly-rich_Ago1 | PF12764 | 93 - 204 | 4.6e-19 | Glycine-rich region of argonaut |
| ArgoN | PF16486 | 224 - 359 | 4.4e-38 | N-terminal domain of argonaute |
| ArgoL1 | PF08699 | 369 - 419 | 4.5e-21 | Argonaute linker 1 domain |
| PAZ | PF02170 | 426 - 551 | 6.9e-30 | PAZ domain |
| ArgoL2 | PF16488 | 561 - 607 | 3.4e-16 | Argonaute linker 2 domain |
| ArgoMid | PF16487 | 618 - 692 | 2.4e-09 | Mid domain of argonaute |
| Piwi | PF02171 | 712 - 1031 | 5.5e-117 | Piwi domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1673 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2135 |
| Acc16I | TGCGCA | 1 cut(s) | 1397 |
| Acc36I | ACCTGC | 3 cut(s) | 91, 1673, 2139 |
| Acc65I | GGTACC | 1 cut(s) | 2082 |
| AccB1I | GGYRCC | 3 cut(s) | 613, 2082, 2766 |
| AccI | GTMKAC | 2 cut(s) | 835, 866 |
| AccII | CGCG | 4 cut(s) | 219, 1080, 3025, 3172 |
| AclWI | GGATC | 5 cut(s) | 1727, 2208, 2534, 2547, 3124 |
| AcoI | YGGCCR | 4 cut(s) | 160, 214, 367, 2453 |
| AcsI | RAATTY | 4 cut(s) | 959, 977, 2187, 2907 |
| AcuI | CTGAAG | 2 cut(s) | 522, 1040 |
| AcvI | CACGTG | 2 cut(s) | 989, 2941 |
| AdeI | CACNNNGTG | 2 cut(s) | 1157, 3191 |
| AflII | CTTAAG | 1 cut(s) | 1655 |
| AflIII | ACRYGT | 2 cut(s) | 2236, 3023 |
| AgeI | ACCGGT | 1 cut(s) | 607 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1710 |
| AjiI | CACGTC | 1 cut(s) | 3143 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 807, 839 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1434, 1466 |
| Alw21I | GWGCWC | 9 cut(s) | 112, 589, 2047, 2491, 2511, 3082, 3136, 3179, 3187 |
| Alw26I | GTCTC | 6 cut(s) | 78, 1016, 1224, 1630, 2189, 3095 |
| Alw44I | GTGCAC | 1 cut(s) | 585 |
| AlwI | GGATC | 5 cut(s) | 1727, 2208, 2534, 2547, 3124 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1291, 2024, 2521 |
| Ama87I | CYCGRG | 3 cut(s) | 416, 530, 619 |
| ApaI | GGGCCC | 1 cut(s) | 252 |
| ApaLI | GTGCAC | 1 cut(s) | 585 |
| ApoI | RAATTY | 4 cut(s) | 959, 977, 2187, 2907 |
| AseI | ATTAAT | 1 cut(s) | 1926 |
| AsiGI | ACCGGT | 1 cut(s) | 607 |
| Asp718I | GGTACC | 1 cut(s) | 2082 |
| AspLEI | GCGC | 5 cut(s) | 1054, 1080, 1398, 1674, 2625 |
| AsuC2I | CCSGG | 1 cut(s) | 1960 |
| AsuHPI | GGTGA | 7 cut(s) | 40, 475, 811, 992, 1169, 1654, 2186 |
| AvaI | CYCGRG | 3 cut(s) | 416, 530, 619 |
| AvaII | GGWCC | 7 cut(s) | 167, 314, 377, 932, 1962, 2518, 3167 |
| BaeGI | GKGCMC | 2 cut(s) | 252, 589 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2832, 2865 |
| BalI | TGGCCA | 1 cut(s) | 2455 |
| BamHI | GGATCC | 1 cut(s) | 2539 |
| BanI | GGYRCC | 3 cut(s) | 613, 2082, 2766 |
| BanII | GRGCYC | 5 cut(s) | 252, 483, 2047, 2511, 3082 |
| BauI | CACGAG | 1 cut(s) | 3178 |
| BbrPI | CACGTG | 2 cut(s) | 989, 2941 |
| BbsI | GAAGAC | 1 cut(s) | 1150 |
| Bbv12I | GWGCWC | 9 cut(s) | 112, 589, 2047, 2491, 2511, 3082, 3136, 3179, 3187 |
| BccI | CCATC | 9 cut(s) | 468, 781, 828, 842, 923, 1204, 2400, 2428, 3069 |
| BceAI | ACGGC | 5 cut(s) | 147, 354, 1098, 2780, 2907 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 314, 348, 1558, 1592, 2672, 2706 |
| BciVI | GTATCC | 1 cut(s) | 2224 |
| BclI | TGATCA | 1 cut(s) | 2053 |
| BcnI | CCSGG | 1 cut(s) | 1960 |
| BcoDI | GTCTC | 6 cut(s) | 78, 1016, 1224, 1630, 2189, 3095 |
| BfaI | CTAG | 4 cut(s) | 54, 591, 1095, 2079 |
| BfmI | CTRYAG | 3 cut(s) | 2893, 2978, 3201 |
| BfoI | RGCGCY | 2 cut(s) | 1055, 1675 |
| BfrI | CTTAAG | 1 cut(s) | 1655 |
| BfuAI | ACCTGC | 3 cut(s) | 91, 1673, 2139 |
| BfuI | GTATCC | 1 cut(s) | 2224 |
| BmcAI | AGTACT | 2 cut(s) | 1493, 2316 |
| Bme18I | GGWCC | 7 cut(s) | 167, 314, 377, 932, 1962, 2518, 3167 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1710 |
| BmeT110I | CYCGRG | 3 cut(s) | 416, 530, 619 |
| BmgBI | CACGTC | 1 cut(s) | 3143 |
| BmrI | ACTGGG | 2 cut(s) | 431, 2212 |
| BmsI | GCATC | 6 cut(s) | 1027, 2080, 2314, 2634, 2680, 3008 |
| BmuI | ACTGGG | 2 cut(s) | 431, 2212 |
| BpiI | GAAGAC | 1 cut(s) | 1150 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1779 |
| BpuEI | CTTGAG | 3 cut(s) | 1029, 2475, 3209 |
| BpuMI | CCSGG | 1 cut(s) | 1960 |
| BsaAI | YACGTR | 3 cut(s) | 989, 2941, 3009 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1329 |
| BsaI | GGTCTC | 1 cut(s) | 1016 |
| BsaWI | WCCGGW | 1 cut(s) | 607 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1353, 1383, 1890, 1920 |
| Bse118I | RCCGGY | 3 cut(s) | 169, 607, 872 |
| Bse1I | ACTGG | 9 cut(s) | 437, 670, 730, 1265, 1834, 2218, 2456, 2566, 3126 |
| Bse3DI | GCAATG | 1 cut(s) | 2100 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1329 |
| BseGI | GGATG | 7 cut(s) | 518, 1306, 2392, 2398, 2511, 2866, 2956 |
| BseJI | GATNNNNATC | 1 cut(s) | 1329 |
| BseMI | GCAATG | 1 cut(s) | 2100 |
| BseMII | CTCAG | 5 cut(s) | 335, 422, 1220, 1793, 2558 |
| BseNI | ACTGG | 9 cut(s) | 437, 670, 730, 1265, 1834, 2218, 2456, 2566, 3126 |
| BseRI | GAGGAG | 1 cut(s) | 52 |
| BseSI | GKGCMC | 2 cut(s) | 252, 589 |
| BseYI | CCCAGC | 4 cut(s) | 4, 86, 102, 522 |
| BsgI | GTGCAG | 3 cut(s) | 162, 407, 1788 |
| Bsh1236I | CGCG | 4 cut(s) | 219, 1080, 3025, 3172 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1568 |
| BshNI | GGYRCC | 3 cut(s) | 613, 2082, 2766 |
| BshTI | ACCGGT | 1 cut(s) | 607 |
| BsiEI | CGRYCG | 1 cut(s) | 1568 |
| BsiHKAI | GWGCWC | 9 cut(s) | 112, 589, 2047, 2491, 2511, 3082, 3136, 3179, 3187 |
| BsiHKCI | CYCGRG | 3 cut(s) | 416, 530, 619 |
| BsiSI | CCGG | 8 cut(s) | 170, 608, 752, 873, 1960, 2107, 2927, 3047 |
| BslFI | GGGAC | 2 cut(s) | 1089, 2654 |
| BsmAI | GTCTC | 6 cut(s) | 78, 1016, 1224, 1630, 2189, 3095 |
| BsmBI | CGTCTC | 1 cut(s) | 2189 |
| BsmFI | GGGAC | 2 cut(s) | 1089, 2654 |
| BsmI | GAATGC | 1 cut(s) | 3071 |
| Bso31I | GGTCTC | 1 cut(s) | 1016 |
| BsoBI | CYCGRG | 3 cut(s) | 416, 530, 619 |
| Bsp120I | GGGCCC | 1 cut(s) | 248 |
| Bsp1407I | TGTACA | 3 cut(s) | 15, 677, 807 |
| Bsp143I | GATC | 6 cut(s) | 1330, 1732, 2053, 2200, 2539, 3116 |
| Bsp19I | CCATGG | 1 cut(s) | 1581 |
| BspCNI | CTCAG | 5 cut(s) | 334, 421, 1219, 1792, 2557 |
| BspFNI | CGCG | 4 cut(s) | 219, 1080, 3025, 3172 |
| BspHI | TCATGA | 3 cut(s) | 76, 1678, 1822 |
| BspMAI | CTGCAG | 3 cut(s) | 2897, 2982, 3205 |
| BspMI | ACCTGC | 3 cut(s) | 91, 1673, 2139 |
| BspPI | GGATC | 5 cut(s) | 1727, 2208, 2534, 2547, 3124 |
| BspQI | GCTCTTC | 1 cut(s) | 1359 |
| BspT107I | GGYRCC | 3 cut(s) | 613, 2082, 2766 |
| BspTI | CTTAAG | 1 cut(s) | 1655 |
| BspTNI | GGTCTC | 1 cut(s) | 1016 |
| BsrDI | GCAATG | 1 cut(s) | 2100 |
| BsrFI | RCCGGY | 3 cut(s) | 169, 607, 872 |
| BsrGI | TGTACA | 3 cut(s) | 15, 677, 807 |
| BsrI | ACTGG | 9 cut(s) | 437, 670, 730, 1265, 1834, 2218, 2456, 2566, 3126 |
| BssAI | RCCGGY | 3 cut(s) | 169, 607, 872 |
| BssMI | GATC | 6 cut(s) | 1330, 1732, 2053, 2200, 2539, 3116 |
| BssNAI | GTATAC | 1 cut(s) | 867 |
| BssSI | CACGAG | 1 cut(s) | 3178 |
| BssT1I | CCWWGG | 5 cut(s) | 154, 448, 1581, 1743, 2715 |
| Bst1107I | GTATAC | 1 cut(s) | 867 |
| Bst2BI | CACGAG | 1 cut(s) | 3178 |
| Bst6I | CTCTTC | 2 cut(s) | 29, 1359 |
| BstAFI | CTTAAG | 1 cut(s) | 1655 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 989, 2273, 3191, 3200 |
| BstAUI | TGTACA | 3 cut(s) | 15, 677, 807 |
| BstBAI | YACGTR | 3 cut(s) | 989, 2941, 3009 |
| BstDEI | CTNAG | 5 cut(s) | 321, 408, 1206, 1779, 2544 |
| BstDSI | CCRYGG | 6 cut(s) | 163, 217, 370, 1107, 1581, 3170 |
| BstEII | GGTNACC | 1 cut(s) | 1660 |
| BstENI | CCTNNNNNAGG | 4 cut(s) | 447, 474, 893, 2400 |
| BstF5I | GGATG | 7 cut(s) | 518, 1306, 2392, 2398, 2511, 2866, 2956 |
| BstFNI | CGCG | 4 cut(s) | 219, 1080, 3025, 3172 |
| BstH2I | RGCGCY | 2 cut(s) | 1055, 1675 |
| BstHHI | GCGC | 5 cut(s) | 1054, 1080, 1398, 1674, 2625 |
| BstKTI | GATC | 6 cut(s) | 1333, 1735, 2056, 2203, 2542, 3119 |
| BstMAI | GTCTC | 6 cut(s) | 78, 1016, 1224, 1630, 2189, 3095 |
| BstMBI | GATC | 6 cut(s) | 1330, 1732, 2053, 2200, 2539, 3116 |
| BstMCI | CGRYCG | 1 cut(s) | 1568 |
| BstNSI | RCATGY | 2 cut(s) | 16, 1529 |
| BstPI | GGTNACC | 1 cut(s) | 1660 |
| BstSFI | CTRYAG | 3 cut(s) | 2893, 2978, 3201 |
| BstSLI | GKGCMC | 2 cut(s) | 252, 589 |
| BstSNI | TACGTA | 1 cut(s) | 3009 |
| BstUI | CGCG | 4 cut(s) | 219, 1080, 3025, 3172 |
| BstV2I | GAAGAC | 1 cut(s) | 1150 |
| BstX2I | RGATCY | 3 cut(s) | 1732, 2200, 2539 |
| BstYI | RGATCY | 3 cut(s) | 1732, 2200, 2539 |
| BstZ17I | GTATAC | 1 cut(s) | 867 |
| BsuI | GTATCC | 1 cut(s) | 2224 |
| BtgI | CCRYGG | 6 cut(s) | 163, 217, 370, 1107, 1581, 3170 |
| BtgZI | GCGATG | 1 cut(s) | 2483 |
| BtrI | CACGTC | 1 cut(s) | 3143 |
| BtsCI | GGATG | 7 cut(s) | 518, 1306, 2392, 2398, 2511, 2866, 2956 |
| BtsI | GCAGTG | 1 cut(s) | 3210 |
| BveI | ACCTGC | 3 cut(s) | 91, 1673, 2139 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1291, 2024, 2521 |
| CciI | TCATGA | 3 cut(s) | 76, 1678, 1822 |
| CfoI | GCGC | 5 cut(s) | 1054, 1080, 1398, 1674, 2625 |
| Cfr10I | RCCGGY | 3 cut(s) | 169, 607, 872 |
| Cfr42I | CCGCGG | 2 cut(s) | 220, 3173 |
| CsiI | ACCWGGT | 3 cut(s) | 2774, 2836, 3187 |
| CspAI | ACCGGT | 1 cut(s) | 607 |
| DdeI | CTNAG | 5 cut(s) | 321, 408, 1206, 1779, 2544 |
| DpnI | GATC | 6 cut(s) | 1332, 1734, 2055, 2202, 2541, 3118 |
| DpnII | GATC | 6 cut(s) | 1330, 1732, 2053, 2200, 2539, 3116 |
| DraI | TTTAAA | 1 cut(s) | 904 |
| DraIII | CACNNNGTG | 2 cut(s) | 1157, 3191 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2135 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1710 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2135 |
| EaeI | YGGCCR | 4 cut(s) | 160, 214, 367, 2453 |
| Eam1104I | CTCTTC | 2 cut(s) | 29, 1359 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1710 |
| EarI | CTCTTC | 2 cut(s) | 29, 1359 |
| EciI | GGCGGA | 4 cut(s) | 114, 480, 563, 2316 |
| Ecl136II | GAGCTC | 3 cut(s) | 2045, 2509, 3080 |
| Eco105I | TACGTA | 1 cut(s) | 3009 |
| Eco130I | CCWWGG | 5 cut(s) | 154, 448, 1581, 1743, 2715 |
| Eco147I | AGGCCT | 1 cut(s) | 2069 |
| Eco24I | GRGCYC | 5 cut(s) | 252, 483, 2047, 2511, 3082 |
| Eco31I | GGTCTC | 1 cut(s) | 1016 |
| Eco47I | GGWCC | 7 cut(s) | 167, 314, 377, 932, 1962, 2518, 3167 |
| Eco53kI | GAGCTC | 3 cut(s) | 2045, 2509, 3080 |
| Eco57I | CTGAAG | 2 cut(s) | 522, 1040 |
| Eco72I | CACGTG | 2 cut(s) | 989, 2941 |
| Eco88I | CYCGRG | 3 cut(s) | 416, 530, 619 |
| Eco91I | GGTNACC | 1 cut(s) | 1660 |
| EcoICRI | GAGCTC | 3 cut(s) | 2045, 2509, 3080 |
| EcoNI | CCTNNNNNAGG | 4 cut(s) | 447, 474, 893, 2400 |
| EcoO109I | RGGNCCY | 3 cut(s) | 249, 2518, 3210 |
| EcoO65I | GGTNACC | 1 cut(s) | 1660 |
| EcoRI | GAATTC | 1 cut(s) | 2907 |
| EcoT14I | CCWWGG | 5 cut(s) | 154, 448, 1581, 1743, 2715 |
| EcoT38I | GRGCYC | 5 cut(s) | 252, 483, 2047, 2511, 3082 |
| ErhI | CCWWGG | 5 cut(s) | 154, 448, 1581, 1743, 2715 |
| Esp3I | CGTCTC | 1 cut(s) | 2189 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1038, 1070 |
| FaqI | GGGAC | 2 cut(s) | 1089, 2654 |
| FauI | CCCGC | 1 cut(s) | 648 |
| FbaI | TGATCA | 1 cut(s) | 2053 |
| FblI | GTMKAC | 2 cut(s) | 835, 866 |
| FokI | GGATG | 7 cut(s) | 505, 1313, 2379, 2385, 2498, 2853, 2963 |
| FriOI | GRGCYC | 5 cut(s) | 252, 483, 2047, 2511, 3082 |
| FspBI | CTAG | 4 cut(s) | 54, 591, 1095, 2079 |
| FspI | TGCGCA | 1 cut(s) | 1397 |
| GlaI | GCGC | 5 cut(s) | 1053, 1079, 1397, 1673, 2624 |
| GsaI | CCCAGC | 4 cut(s) | 8, 90, 106, 526 |
| HaeII | RGCGCY | 2 cut(s) | 1055, 1675 |
| HapII | CCGG | 8 cut(s) | 170, 608, 752, 873, 1960, 2107, 2927, 3047 |
| HhaI | GCGC | 5 cut(s) | 1054, 1080, 1398, 1674, 2625 |
| Hin6I | GCGC | 5 cut(s) | 1052, 1078, 1396, 1672, 2623 |
| HinP1I | GCGC | 5 cut(s) | 1052, 1078, 1396, 1672, 2623 |
| HincII | GTYRAC | 1 cut(s) | 2815 |
| HindII | GTYRAC | 1 cut(s) | 2815 |
| HpaII | CCGG | 8 cut(s) | 170, 608, 752, 873, 1960, 2107, 2927, 3047 |
| HphI | GGTGA | 7 cut(s) | 40, 475, 811, 992, 1169, 1654, 2186 |
| Hpy99I | CGWCG | 1 cut(s) | 1429 |
| HpyCH4IV | ACGT | 9 cut(s) | 738, 832, 988, 1424, 2238, 2338, 2940, 3008, 3142 |
| HpyF3I | CTNAG | 5 cut(s) | 321, 408, 1206, 1779, 2544 |
| HpySE526I | ACGT | 9 cut(s) | 738, 832, 988, 1424, 2238, 2338, 2940, 3008, 3142 |
| HspAI | GCGC | 5 cut(s) | 1052, 1078, 1396, 1672, 2623 |
| KpnI | GGTACC | 1 cut(s) | 2086 |
| KroI | GCCGGC | 1 cut(s) | 872 |
| KroNI | GCCGGC | 1 cut(s) | 874 |
| Ksp22I | TGATCA | 1 cut(s) | 2053 |
| KspI | CCGCGG | 2 cut(s) | 220, 3173 |
| Kzo9I | GATC | 6 cut(s) | 1330, 1732, 2053, 2200, 2539, 3116 |
| LguI | GCTCTTC | 1 cut(s) | 1359 |
| LweI | GCATC | 6 cut(s) | 1027, 2080, 2314, 2634, 2680, 3008 |
| MabI | ACCWGGT | 3 cut(s) | 2774, 2836, 3187 |
| MaeI | CTAG | 4 cut(s) | 54, 591, 1095, 2079 |
| MaeII | ACGT | 9 cut(s) | 738, 832, 988, 1424, 2238, 2338, 2940, 3008, 3142 |
| MalI | GATC | 6 cut(s) | 1332, 1734, 2055, 2202, 2541, 3118 |
| MboI | GATC | 6 cut(s) | 1330, 1732, 2053, 2200, 2539, 3116 |
| MboII | GAAGA | 6 cut(s) | 46, 1155, 1346, 1742, 1790, 2293 |
| MfeI | CAATTG | 2 cut(s) | 1912, 2424 |
| MflI | RGATCY | 3 cut(s) | 1732, 2200, 2539 |
| MlsI | TGGCCA | 1 cut(s) | 2455 |
| MluI | ACGCGT | 1 cut(s) | 3023 |
| MluNI | TGGCCA | 1 cut(s) | 2455 |
| MlyI | GAGTC | 5 cut(s) | 80, 115, 313, 1371, 2846 |
| MmeI | TCCRAC | 3 cut(s) | 1226, 1531, 2894 |
| Mox20I | TGGCCA | 1 cut(s) | 2455 |
| MroNI | GCCGGC | 1 cut(s) | 872 |
| MscI | TGGCCA | 1 cut(s) | 2455 |
| MseI | TTAA | 6 cut(s) | 903, 1421, 1656, 1926, 2013, 2072 |
| MslI | CAYNNNNRTG | 3 cut(s) | 23, 26, 732 |
| Msp20I | TGGCCA | 1 cut(s) | 2455 |
| MspA1I | CMGCKG | 7 cut(s) | 219, 796, 1261, 2432, 2969, 3114, 3172 |
| MspCI | CTTAAG | 1 cut(s) | 1655 |
| MspI | CCGG | 8 cut(s) | 170, 608, 752, 873, 1960, 2107, 2927, 3047 |
| MunI | CAATTG | 2 cut(s) | 1912, 2424 |
| Mva1269I | GAATGC | 1 cut(s) | 3071 |
| MvnI | CGCG | 4 cut(s) | 219, 1080, 3025, 3172 |
| NaeI | GCCGGC | 1 cut(s) | 874 |
| NciI | CCSGG | 1 cut(s) | 1960 |
| NcoI | CCATGG | 1 cut(s) | 1581 |
| NdeII | GATC | 6 cut(s) | 1330, 1732, 2053, 2200, 2539, 3116 |
| NgoMIV | GCCGGC | 1 cut(s) | 872 |
| NmuCI | GTSAC | 9 cut(s) | 757, 799, 1149, 1375, 1660, 2174, 2354, 2740, 2982 |
| NsbI | TGCGCA | 1 cut(s) | 1397 |
| NspI | RCATGY | 2 cut(s) | 16, 1529 |
| PaeR7I | CTCGAG | 1 cut(s) | 619 |
| PagI | TCATGA | 3 cut(s) | 76, 1678, 1822 |
| PaqCI | CACCTGC | 1 cut(s) | 1673 |
| PasI | CCCWGGG | 1 cut(s) | 178 |
| PceI | AGGCCT | 1 cut(s) | 2069 |
| PciSI | GCTCTTC | 1 cut(s) | 1359 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1708 |
| PctI | GAATGC | 1 cut(s) | 3071 |
| PdiI | GCCGGC | 1 cut(s) | 874 |
| PfeI | GAWTC | 7 cut(s) | 815, 1294, 1325, 1755, 1771, 2411, 2695 |
| PflFI | GACNNNGTC | 1 cut(s) | 2645 |
| PfoI | TCCNGGA | 2 cut(s) | 2514, 3136 |
| PinAI | ACCGGT | 1 cut(s) | 607 |
| PleI | GAGTC | 5 cut(s) | 79, 115, 313, 1370, 2846 |
| PmaCI | CACGTG | 2 cut(s) | 989, 2941 |
| PmlI | CACGTG | 2 cut(s) | 989, 2941 |
| PpsI | GAGTC | 5 cut(s) | 79, 115, 313, 1370, 2846 |
| Ppu21I | YACGTR | 3 cut(s) | 989, 2941, 3009 |
| PpuMI | RGGWCCY | 1 cut(s) | 2518 |
| PshBI | ATTAAT | 1 cut(s) | 1926 |
| Psp124BI | GAGCTC | 3 cut(s) | 2047, 2511, 3082 |
| Psp5II | RGGWCCY | 1 cut(s) | 2518 |
| PspCI | CACGTG | 2 cut(s) | 989, 2941 |
| PspEI | GGTNACC | 1 cut(s) | 1660 |
| PspFI | CCCAGC | 4 cut(s) | 4, 86, 102, 522 |
| PspOMI | GGGCCC | 1 cut(s) | 248 |
| PspPPI | RGGWCCY | 1 cut(s) | 2518 |
| PspXI | VCTCGAGB | 1 cut(s) | 619 |
| PstI | CTGCAG | 3 cut(s) | 2897, 2982, 3205 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1291, 2024, 2521 |
| PsuI | RGATCY | 3 cut(s) | 1732, 2200, 2539 |
| PsyI | GACNNNGTC | 1 cut(s) | 2645 |
| PvuII | CAGCTG | 3 cut(s) | 796, 2432, 2969 |
| RseI | CAYNNNNRTG | 3 cut(s) | 23, 26, 732 |
| SacI | GAGCTC | 3 cut(s) | 2047, 2511, 3082 |
| SacII | CCGCGG | 2 cut(s) | 220, 3173 |
| SapI | GCTCTTC | 1 cut(s) | 1359 |
| SaqAI | TTAA | 6 cut(s) | 903, 1421, 1656, 1926, 2013, 2072 |
| Sau3AI | GATC | 6 cut(s) | 1330, 1732, 2053, 2200, 2539, 3116 |
| ScaI | AGTACT | 2 cut(s) | 1493, 2316 |
| SchI | GAGTC | 5 cut(s) | 80, 115, 313, 1371, 2846 |
| SexAI | ACCWGGT | 3 cut(s) | 2774, 2836, 3187 |
| SfaNI | GCATC | 6 cut(s) | 1027, 2080, 2314, 2634, 2680, 3008 |
| SfcI | CTRYAG | 3 cut(s) | 2893, 2978, 3201 |
| Sfr274I | CTCGAG | 1 cut(s) | 619 |
| Sfr303I | CCGCGG | 2 cut(s) | 220, 3173 |
| SgrBI | CCGCGG | 2 cut(s) | 220, 3173 |
| SinI | GGWCC | 7 cut(s) | 167, 314, 377, 932, 1962, 2518, 3167 |
| SlaI | CTCGAG | 1 cut(s) | 619 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 23, 26, 732 |
| SmlI | CTYRAG | 5 cut(s) | 619, 1044, 1655, 2490, 3224 |
| SmoI | CTYRAG | 5 cut(s) | 619, 1044, 1655, 2490, 3224 |
| SnaBI | TACGTA | 1 cut(s) | 3009 |
| SseBI | AGGCCT | 1 cut(s) | 2069 |
| SspI | AATATT | 1 cut(s) | 1228 |
| SspMI | CTAG | 4 cut(s) | 54, 591, 1095, 2079 |
| SstI | GAGCTC | 3 cut(s) | 2047, 2511, 3082 |
| StuI | AGGCCT | 1 cut(s) | 2069 |
| StyI | CCWWGG | 5 cut(s) | 154, 448, 1581, 1743, 2715 |
| TaiI | ACGT | 9 cut(s) | 741, 835, 991, 1427, 2241, 2341, 2943, 3011, 3145 |
| TaqI | TCGA | 3 cut(s) | 620, 1602, 2047 |
| TaqII | GACCGA | 2 cut(s) | 331, 1582 |
| TatI | WGTACW | 6 cut(s) | 15, 677, 807, 1491, 2026, 2314 |
| TauI | GCSGC | 4 cut(s) | 219, 229, 529, 1261 |
| TfiI | GAWTC | 7 cut(s) | 815, 1294, 1325, 1755, 1771, 2411, 2695 |
| Tru1I | TTAA | 6 cut(s) | 903, 1421, 1656, 1926, 2013, 2072 |
| Tru9I | TTAA | 6 cut(s) | 903, 1421, 1656, 1926, 2013, 2072 |
| TseFI | GTSAC | 9 cut(s) | 757, 799, 1149, 1375, 1660, 2174, 2354, 2740, 2982 |
| Tsp45I | GTSAC | 9 cut(s) | 757, 799, 1149, 1375, 1660, 2174, 2354, 2740, 2982 |
| TspGWI | ACGGA | 2 cut(s) | 2213, 2585 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2645 |
| Vha464I | CTTAAG | 1 cut(s) | 1655 |
| VneI | GTGCAC | 1 cut(s) | 585 |
| VpaK11BI | GGWCC | 7 cut(s) | 167, 314, 377, 932, 1962, 2518, 3167 |
| VspI | ATTAAT | 1 cut(s) | 1926 |
| XagI | CCTNNNNNAGG | 4 cut(s) | 447, 474, 893, 2400 |
| XapI | RAATTY | 4 cut(s) | 959, 977, 2187, 2907 |
| XceI | RCATGY | 2 cut(s) | 16, 1529 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 161, 185 |
| XhoI | CTCGAG | 1 cut(s) | 619 |
| XmiI | GTMKAC | 2 cut(s) | 835, 866 |
| XspI | CTAG | 4 cut(s) | 54, 591, 1095, 2079 |
| ZrmI | AGTACT | 2 cut(s) | 1493, 2316 |