histone-lysine N-methyltransferase, H3 lysine-9 specific
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g24480 FvH4_2g24480 FvH4_7g03510 FvH4_7g26750 FvH4_7g26780 FvH4_7g26780 FvH4_7g26780 |
| pyrus_communis | pycom07g04430 |
| rosa_chinensis | RchiOBHm_Chr1g0325811 RchiOBHm_Chr1g0373401 RchiOBHm_Chr6g0292341 |
| rosa_laevigata | RLG00000012041 RLG00000026824 RLG00000030101 |
| rosa_multiflora | Rmu_sc0001354.1_g000005 Rmu_sc0017023.1_g000001 Rmu_sc0019006.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00284230 Rroxscaffold_4G00324280 |
| rosa_rugosa | Rorug01G0055100 Rorug01G0055200 Rorug01G0377500 Rorug06G0225500 |
| rosa_samantha | Rh1AG071400 Rh1AG071500 Rh1AG386600 Rh1BG058400 Rh1BG350600 Rh1BG350700 Rh1BG350900 Rh1CG070900 Rh1CG363700 Rh1DG075600 Rh1DG075700 Rh1DG381400 Rh6AG338900 Rh6BG346000 Rh6CG353100 Rh6DG339000 |
| rosa_wichuraiana | Rw1G005820 Rw1G034860 Rw6G029500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 21 |
| AclWI | GGATC | 3 cut(s) | 99, 112, 140 |
| AcsI | RAATTY | 1 cut(s) | 180 |
| AfaI | GTAC | 1 cut(s) | 18 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 194 |
| AgsI | TTSAA | 3 cut(s) | 13, 165, 208 |
| Alw26I | GTCTC | 2 cut(s) | 17, 58 |
| AlwI | GGATC | 3 cut(s) | 99, 112, 140 |
| ApoI | RAATTY | 1 cut(s) | 180 |
| BamHI | GGATCC | 1 cut(s) | 104 |
| BbsI | GAAGAC | 1 cut(s) | 144 |
| BclI | TGATCA | 1 cut(s) | 157 |
| BcoDI | GTCTC | 2 cut(s) | 17, 58 |
| BmiI | GGNNCC | 1 cut(s) | 106 |
| BpiI | GAAGAC | 1 cut(s) | 144 |
| BpmI | CTGGAG | 2 cut(s) | 33, 216 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 194 |
| Bse1I | ACTGG | 2 cut(s) | 50, 156 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 194 |
| BseNI | ACTGG | 2 cut(s) | 50, 156 |
| Bsh1236I | CGCG | 1 cut(s) | 21 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 194 |
| BsmAI | GTCTC | 2 cut(s) | 17, 58 |
| Bsp143I | GATC | 4 cut(s) | 62, 104, 145, 157 |
| BspFNI | CGCG | 1 cut(s) | 21 |
| BspLI | GGNNCC | 1 cut(s) | 106 |
| BspPI | GGATC | 3 cut(s) | 99, 112, 140 |
| BsrI | ACTGG | 2 cut(s) | 50, 156 |
| BssMI | GATC | 4 cut(s) | 62, 104, 145, 157 |
| Bst4CI | ACNGT | 2 cut(s) | 28, 143 |
| BstDEI | CTNAG | 2 cut(s) | 109, 219 |
| BstFNI | CGCG | 1 cut(s) | 21 |
| BstKTI | GATC | 4 cut(s) | 65, 107, 148, 160 |
| BstMAI | GTCTC | 2 cut(s) | 17, 58 |
| BstMBI | GATC | 4 cut(s) | 62, 104, 145, 157 |
| BstUI | CGCG | 1 cut(s) | 21 |
| BstV2I | GAAGAC | 1 cut(s) | 144 |
| BstX2I | RGATCY | 1 cut(s) | 104 |
| BstYI | RGATCY | 1 cut(s) | 104 |
| BtsIMutI | CAGTG | 1 cut(s) | 149 |
| Csp6I | GTAC | 1 cut(s) | 17 |
| CviAII | CATG | 1 cut(s) | 134 |
| CviQI | GTAC | 1 cut(s) | 17 |
| DdeI | CTNAG | 2 cut(s) | 109, 219 |
| DpnI | GATC | 4 cut(s) | 64, 106, 147, 159 |
| DpnII | GATC | 4 cut(s) | 62, 104, 145, 157 |
| FaeI | CATG | 1 cut(s) | 137 |
| FaiI | YATR | 1 cut(s) | 135 |
| FatI | CATG | 1 cut(s) | 133 |
| FbaI | TGATCA | 1 cut(s) | 157 |
| GsuI | CTGGAG | 2 cut(s) | 33, 216 |
| Hin1II | CATG | 1 cut(s) | 137 |
| Hpy166II | GTNNAC | 1 cut(s) | 73 |
| Hpy188III | TCNNGA | 3 cut(s) | 66, 176, 195 |
| Hpy8I | GTNNAC | 1 cut(s) | 73 |
| HpyCH4III | ACNGT | 2 cut(s) | 28, 143 |
| HpyCH4V | TGCA | 2 cut(s) | 83, 121 |
| HpyF3I | CTNAG | 2 cut(s) | 109, 219 |
| Hsp92II | CATG | 1 cut(s) | 137 |
| Ksp22I | TGATCA | 1 cut(s) | 157 |
| Kzo9I | GATC | 4 cut(s) | 62, 104, 145, 157 |
| LpnPI | CCDG | 4 cut(s) | 63, 111, 137, 180 |
| MalI | GATC | 4 cut(s) | 64, 106, 147, 159 |
| MboI | GATC | 4 cut(s) | 62, 104, 145, 157 |
| MboII | GAAGA | 3 cut(s) | 43, 149, 220 |
| MflI | RGATCY | 1 cut(s) | 104 |
| MluCI | AATT | 2 cut(s) | 6, 180 |
| MnlI | CCTC | 1 cut(s) | 199 |
| MvnI | CGCG | 1 cut(s) | 21 |
| NdeII | GATC | 4 cut(s) | 62, 104, 145, 157 |
| NlaIII | CATG | 1 cut(s) | 137 |
| NlaIV | GGNNCC | 1 cut(s) | 106 |
| PspN4I | GGNNCC | 1 cut(s) | 106 |
| PsuI | RGATCY | 1 cut(s) | 104 |
| RsaI | GTAC | 1 cut(s) | 18 |
| RsaNI | GTAC | 1 cut(s) | 17 |
| Sau3AI | GATC | 4 cut(s) | 62, 104, 145, 157 |
| Sse9I | AATT | 2 cut(s) | 6, 180 |
| TaaI | ACNGT | 2 cut(s) | 28, 143 |
| TasI | AATT | 2 cut(s) | 6, 180 |
| TscAI | CASTG | 1 cut(s) | 156 |
| TspDTI | ATGAA | 1 cut(s) | 150 |
| TspRI | CASTG | 1 cut(s) | 156 |
| XapI | RAATTY | 1 cut(s) | 180 |