FvH4_7g12610

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
11411247 .. 11413887
2641 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g12610.t2

Sequence Viewer

Length: 1128 bp
ATGCCTGAGCAAACTACCCCTGTAGTTTTCGACACCGAAGTCATTCAGTACCAATCCAACATCCCTTCCCCTTTCATTTGGCCGGACGACGAGAAGCCTGGCTCCGACTTGCCGGACCTTCAGGCTCCGGCCATCGACCTCAACGGCTTCCTCAGTGGCGATCCATCAATCGTTGCAGAGTCGATTCGTGCAGTCGACGAGGCATGCAAGAAGCATGGATTCTTCCTCATTGTGAACCACGGAGTTGATCCGGAGCTCGCTGCTAAAGCTCATGACTACTTTGATGTCTTCTTTGGGAGGAAGCTCTCGGAGAAGCAAAGGGCTCAGAGGAAGGTTGGAGACAGTTGGGGTTACACTAGCAGCTTCACCGGCAGGTTTAACTCCAAGCTTCCATGGAAAGAGACACTTAGTGTCAGGTATTCATCTGAGAGCCAGTGCTCAACAATCGTCGATGACTACTTTGTGAATGTATTGGGTGAAGATTTCAGAGAAATGGGGAAGTTGTACCAAGAATACTCGGAAGTGGTGAACAAAGTAGGCAATGTGGTATTGGAGCTACTGGGACTGAGCTTGGGAGTTGGGCGGGAGTACTTCAAAGAATATTACAAAGGAAACGAAGCGATCCTAAGGTGGAACTACTATCCAATCTGCCAAAAACCAGACTTAACACTGGGAACTGGACCTCATCGTGATCCCACTTCTGTGACAATCCTTCATCAGGATCAAGTCGGGGGCCTTGAAGTGTTTGTCGATGAGAAGTGGCACACTGTTACTCCTGTTCCTGGTTCTTTTGTTATCAACATTGGTGATACTTTTATGGCTCTGTGCAATGGGATTTACAAGAGCTGCAAGCATAGAGCTGTGGTAAATAACAAAACTGCAAGGAAATCTCTTGCTTTCTTTATCGTTCCACACAAGGACAGAGTAGTGTCTGCACCAGCAAGTTTGATCAGTGCTGATAGCCCTAGGTTGTACCCAGACTTTACTTGGCCTACTCTGCTAGAATTTACCCAGAAAAAACGCAGGGCTGACTTGAGCACCATTGATGCTTTTGTGGACTGGATTAAGCAAGAGGGTGGAGAGAAAAACAAAGACCAAGGAAAGGGAGTCTTTGTTAAGTCCTTTTAA

Protein Analysis

376

Amino Acids

42.26

Weight (kDa)

5.82

Isoelectric Point (pI)

32.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 43 - 141 1.5e-19 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 179 - 277 6.3e-33 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000462)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25420 AT4G25420 AT5G51810 AT5G51810
fragaria_vesca FvH4_7g12600 FvH4_7g12610 FvH4_7g12610 FvH4_7g28670
malus_domestica MD00G1003600.v1.1 MD00G1123700.v1.1 MD01G1192100.v1.1 MD02G1198000.v1.1
prunus_persica Prupe.2G150700_v2.0.a1 Prupe.2G286800_v2.0.a1
pyrus_communis pycom02g16160
rosa_chinensis RchiOBHm_Chr1g0351591 RchiOBHm_Chr1g0351601 RchiOBHm_Chr1g0351611 RchiOBHm_Chr1g0351621 RchiOBHm_Chr1g0351631 RchiOBHm_Chr1g0353771 RchiOBHm_Chr1g0353791 RchiOBHm_Chr1g0376161
rosa_laevigata RLG00000026625 RLG00000028255 RLG00000028258 RLG00000028394 RLG00000028395 RLG00000028396 RLG00000028397 RLG00000028399
rosa_multiflora Rmu_sc0001144.1_g000008 Rmu_sc0001144.1_g000010 Rmu_sc0001144.1_g000018 Rmu_sc0001144.1_g000029 Rmu_sc0002300.1_g000001 Rmu_sc0002300.1_g000013 Rmu_sc0005947.1_g000014 Rmu_sc0020670.1_g000001 Rmu_ssc0000116.1_g000048
rosa_roxburghii Rroxscaffold_4G00282340 Rroxscaffold_4G00301610 Rroxscaffold_4G00301650 Rroxscaffold_4G00303660 Rroxscaffold_4G00303670 Rroxscaffold_4G00303690 Rroxscaffold_4G00303710
rosa_rugosa Rorug01G0218900 Rorug01G0219000.1 Rorug01G0219100 Rorug01G0219300 Rorug01G0219400 Rorug01G0219500 Rorug01G0238200 Rorug01G0238400 Rorug01G0394200
rosa_samantha Rh1AG233600 Rh1AG234000 Rh1AG234100 Rh1AG234200 Rh1AG250000 Rh1AG250100 Rh1AG405700 Rh1BG204300 Rh1BG204500 Rh1BG204700 Rh1BG204800 Rh1BG220300 Rh1BG220600 Rh1BG369400 Rh1CG218200 Rh1CG218600 Rh1CG218700 Rh1CG218800 Rh1CG232600 Rh1CG382100 Rh1DG231200 Rh1DG231500 Rh1DG231700 Rh1DG231800 Rh1DG247200 Rh1DG247500 Rh1DG399000
rosa_wichuraiana Rw0G011370 Rw1G020360 Rw1G020370 Rw1G020380 Rw1G020390 Rw1G021810 Rw1G021830 Rw1G035990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 38
Acc36I ACCTGC 1 cut(s) 363
AccI GTMKAC 1 cut(s) 195
AccIII TCCGGA 1 cut(s) 250
AciI CCGC 1 cut(s) 583
AclWI GGATC 5 cut(s) 155, 242, 616, 686, 729
AcoI YGGCCR 2 cut(s) 80, 129
AcsI RAATTY 1 cut(s) 1004
AcuI CTGAAG 1 cut(s) 104
AdeI CACNNNGTG 1 cut(s) 410
AfaI GTAC 4 cut(s) 50, 506, 590, 974
AfiI CCNNNNNNNGG 3 cut(s) 718, 782, 1102
AgsI TTSAA 2 cut(s) 595, 740
AjnI CCWGG 2 cut(s) 97, 781
AleI CACNNNNGTG 1 cut(s) 701
AluBI AGCT 9 cut(s) 256, 269, 304, 363, 388, 556, 570, 846, 860
AluI AGCT 9 cut(s) 256, 269, 304, 363, 388, 556, 570, 846, 860
Alw21I GWGCWC 3 cut(s) 258, 440, 1040
Alw26I GTCTC 2 cut(s) 333, 395
AlwI GGATC 5 cut(s) 155, 242, 616, 686, 729
Aor13HI TCCGGA 1 cut(s) 250
AoxI GGCC 4 cut(s) 80, 129, 733, 989
ApeKI GCWGC 3 cut(s) 260, 360, 846
ApoI RAATTY 1 cut(s) 1004
Asp700I GAANNNNTTC 1 cut(s) 42
AspA2I CCTAGG 1 cut(s) 965
AspS9I GGNCC 3 cut(s) 115, 680, 733
AsuHPI GGTGA 4 cut(s) 358, 488, 538, 818
AvaII GGWCC 2 cut(s) 115, 680
AvrII CCTAGG 1 cut(s) 965
AxyI CCTNAGG 1 cut(s) 626
BanII GRGCYC 2 cut(s) 258, 325
BbsI GAAGAC 1 cut(s) 280
Bbv12I GWGCWC 3 cut(s) 258, 440, 1040
BbvI GCAGC 3 cut(s) 247, 372, 833
BccI CCATC 2 cut(s) 140, 172
BceAI ACGGC 1 cut(s) 160
BciT130I CCWGG 2 cut(s) 99, 783
BclI TGATCA 1 cut(s) 948
BcoDI GTCTC 2 cut(s) 333, 395
BfaI CTAG 3 cut(s) 357, 966, 1001
BfmI CTRYAG 1 cut(s) 21
BfuAI ACCTGC 1 cut(s) 363
BisI GCNGC 3 cut(s) 261, 361, 847
BlnI CCTAGG 1 cut(s) 965
BlsI GCNGC 3 cut(s) 262, 362, 848
BmcAI AGTACT 1 cut(s) 590
Bme1390I CCNGG 2 cut(s) 99, 783
Bme18I GGWCC 2 cut(s) 115, 680
BmgT120I GGNCC 3 cut(s) 115, 680, 733
BmiI GGNNCC 3 cut(s) 103, 126, 734
BmrFI CCNGG 2 cut(s) 99, 783
BmrI ACTGGG 2 cut(s) 569, 680
BmsI GCATC 1 cut(s) 1036
BmuI ACTGGG 2 cut(s) 569, 680
BpiI GAAGAC 1 cut(s) 280
Bpu10I CCTNAGC 1 cut(s) 6
BpuEI CTTGAG 1 cut(s) 1054
BsaJI CCNNGG 4 cut(s) 238, 392, 965, 1096
BsaWI WCCGGW 1 cut(s) 250
BsaXI ACNNNNNCTCC 4 cut(s) 757, 787, 1098, 1128
Bsc4I CCNNNNNNNGG 3 cut(s) 718, 782, 1102
Bse118I RCCGGY 1 cut(s) 368
Bse1I ACTGG 5 cut(s) 433, 564, 675, 682, 1064
Bse21I CCTNAGG 1 cut(s) 626
Bse3DI GCAATG 2 cut(s) 547, 835
BseAI TCCGGA 1 cut(s) 250
BseBI CCWGG 2 cut(s) 99, 783
BseDI CCNNGG 4 cut(s) 238, 392, 965, 1096
BseGI GGATG 1 cut(s) 60
BseLI CCNNNNNNNGG 3 cut(s) 718, 782, 1102
BseMI GCAATG 2 cut(s) 547, 835
BseMII CTCAG 4 cut(s) 166, 338, 417, 557
BseNI ACTGG 5 cut(s) 433, 564, 675, 682, 1064
BseXI GCAGC 3 cut(s) 247, 372, 833
BsgI GTGCAG 2 cut(s) 210, 918
BshFI GGCC 4 cut(s) 82, 131, 735, 991
BsiHKAI GWGCWC 3 cut(s) 258, 440, 1040
BsiSI CCGG 5 cut(s) 83, 113, 128, 251, 369
BslFI GGGAC 1 cut(s) 576
BslI CCNNNNNNNGG 3 cut(s) 718, 782, 1102
BsmAI GTCTC 2 cut(s) 333, 395
BsmFI GGGAC 1 cut(s) 576
BsnI GGCC 4 cut(s) 82, 131, 735, 991
Bsp1286I GDGCHC 4 cut(s) 258, 325, 440, 1040
Bsp13I TCCGGA 1 cut(s) 250
Bsp143I GATC 6 cut(s) 160, 247, 621, 691, 721, 948
Bsp19I CCATGG 1 cut(s) 392
BspACI CCGC 1 cut(s) 583
BspANI GGCC 4 cut(s) 82, 131, 735, 991
BspCNI CTCAG 4 cut(s) 165, 337, 418, 558
BspEI TCCGGA 1 cut(s) 250
BspHI TCATGA 1 cut(s) 271
BspLI GGNNCC 3 cut(s) 103, 126, 734
BspMI ACCTGC 1 cut(s) 363
BspPI GGATC 5 cut(s) 155, 242, 616, 686, 729
BsrDI GCAATG 2 cut(s) 547, 835
BsrFI RCCGGY 1 cut(s) 368
BsrI ACTGG 5 cut(s) 433, 564, 675, 682, 1064
BssAI RCCGGY 1 cut(s) 368
BssECI CCNNGG 4 cut(s) 238, 392, 965, 1096
BssMI GATC 6 cut(s) 160, 247, 621, 691, 721, 948
BssT1I CCWWGG 3 cut(s) 392, 965, 1096
Bst2UI CCWGG 2 cut(s) 99, 783
Bst4CI ACNGT 2 cut(s) 344, 769
BstC8I GCNNGC 3 cut(s) 205, 258, 851
BstDEI CTNAG 7 cut(s) 6, 152, 324, 407, 426, 566, 626
BstDSI CCRYGG 2 cut(s) 238, 392
BstENI CCTNNNNNAGG 1 cut(s) 716
BstF5I GGATG 1 cut(s) 60
BstKTI GATC 6 cut(s) 163, 250, 624, 694, 724, 951
BstMAI GTCTC 2 cut(s) 333, 395
BstMBI GATC 6 cut(s) 160, 247, 621, 691, 721, 948
BstMWI GCNNNNNNNGC 3 cut(s) 266, 369, 997
BstNI CCWGG 2 cut(s) 99, 783
BstNSI RCATGY 1 cut(s) 207
BstSCI CCNGG 2 cut(s) 97, 781
BstSFI CTRYAG 1 cut(s) 21
BstV1I GCAGC 3 cut(s) 247, 372, 833
BstV2I GAAGAC 1 cut(s) 280
Bsu36I CCTNAGG 1 cut(s) 626
BsuRI GGCC 4 cut(s) 82, 131, 735, 991
BtgI CCRYGG 2 cut(s) 238, 392
BtsCI GGATG 1 cut(s) 60
BtsIMutI CAGTG 5 cut(s) 160, 440, 668, 765, 958
BveI ACCTGC 1 cut(s) 363
Cac8I GCNNGC 3 cut(s) 205, 258, 851
CciI TCATGA 1 cut(s) 271
Cfr10I RCCGGY 1 cut(s) 368
Cfr13I GGNCC 3 cut(s) 115, 680, 733
Csp6I GTAC 4 cut(s) 49, 505, 589, 973
CviAII CATG 4 cut(s) 204, 215, 272, 393
CviQI GTAC 4 cut(s) 49, 505, 589, 973
DdeI CTNAG 7 cut(s) 6, 152, 324, 407, 426, 566, 626
DpnI GATC 6 cut(s) 162, 249, 623, 693, 723, 950
DpnII GATC 6 cut(s) 160, 247, 621, 691, 721, 948
DraIII CACNNNGTG 1 cut(s) 410
DrdI GACNNNNNNGTC 1 cut(s) 38
DseDI GACNNNNNNGTC 1 cut(s) 38
EaeI YGGCCR 2 cut(s) 80, 129
Ecl136II GAGCTC 1 cut(s) 256
Eco130I CCWWGG 3 cut(s) 392, 965, 1096
Eco24I GRGCYC 2 cut(s) 258, 325
Eco47I GGWCC 2 cut(s) 115, 680
Eco53kI GAGCTC 1 cut(s) 256
Eco57I CTGAAG 1 cut(s) 104
Eco81I CCTNAGG 1 cut(s) 626
EcoICRI GAGCTC 1 cut(s) 256
EcoNI CCTNNNNNAGG 1 cut(s) 716
EcoO109I RGGNCCY 1 cut(s) 733
EcoRII CCWGG 2 cut(s) 97, 781
EcoT14I CCWWGG 3 cut(s) 392, 965, 1096
EcoT38I GRGCYC 2 cut(s) 258, 325
ErhI CCWWGG 3 cut(s) 392, 965, 1096
FaeI CATG 4 cut(s) 207, 218, 275, 396
FaiI YATR 6 cut(s) 205, 216, 273, 394, 818, 855
FalI AAGNNNNNCTT 4 cut(s) 390, 422, 1094, 1126
FaqI GGGAC 1 cut(s) 576
FatI CATG 4 cut(s) 203, 214, 271, 392
FauI CCCGC 1 cut(s) 576
FbaI TGATCA 1 cut(s) 948
FblI GTMKAC 1 cut(s) 195
Fnu4HI GCNGC 3 cut(s) 261, 361, 847
FokI GGATG 1 cut(s) 47
FriOI GRGCYC 2 cut(s) 258, 325
Fsp4HI GCNGC 3 cut(s) 261, 361, 847
FspBI CTAG 3 cut(s) 357, 966, 1001
GluI GCNGC 3 cut(s) 261, 361, 847
HaeIII GGCC 4 cut(s) 82, 131, 735, 991
HapII CCGG 5 cut(s) 83, 113, 128, 251, 369
Hin1II CATG 4 cut(s) 207, 218, 275, 396
HincII GTYRAC 1 cut(s) 196
HindII GTYRAC 1 cut(s) 196
HindIII AAGCTT 1 cut(s) 386
HinfI GANTC 4 cut(s) 179, 184, 219, 1107
HpaII CCGG 5 cut(s) 83, 113, 128, 251, 369
HphI GGTGA 4 cut(s) 358, 488, 538, 818
Hpy166II GTNNAC 4 cut(s) 196, 235, 529, 1057
Hpy188I TCNGA 6 cut(s) 106, 310, 327, 427, 488, 520
Hpy188III TCNNGA 4 cut(s) 251, 272, 689, 719
Hpy8I GTNNAC 4 cut(s) 196, 235, 529, 1057
Hpy99I CGWCG 3 cut(s) 92, 200, 452
HpyAV CCTTC 4 cut(s) 75, 128, 325, 722
HpyCH4III ACNGT 2 cut(s) 344, 769
HpyCH4V TGCA 7 cut(s) 176, 191, 207, 828, 849, 881, 935
HpyF10VI GCNNNNNNNGC 3 cut(s) 266, 369, 997
HpyF3I CTNAG 7 cut(s) 6, 152, 324, 407, 426, 566, 626
Hsp92II CATG 4 cut(s) 207, 218, 275, 396
Kpn2I TCCGGA 1 cut(s) 250
Ksp22I TGATCA 1 cut(s) 948
Kzo9I GATC 6 cut(s) 160, 247, 621, 691, 721, 948
LmnI GCTCC 4 cut(s) 107, 130, 253, 553
Lsp1109I GCAGC 3 cut(s) 247, 372, 833
LweI GCATC 1 cut(s) 1036
MaeI CTAG 3 cut(s) 357, 966, 1001
MaeIII GTNAC 3 cut(s) 350, 703, 769
MalI GATC 6 cut(s) 162, 249, 623, 693, 723, 950
MboI GATC 6 cut(s) 160, 247, 621, 691, 721, 948
MboII GAAGA 3 cut(s) 214, 280, 491
MhlI GDGCHC 4 cut(s) 258, 325, 440, 1040
MluCI AATT 1 cut(s) 1004
MlyI GAGTC 2 cut(s) 188, 1116
MmeI TCCRAC 3 cut(s) 81, 129, 316
MnlI CCTC 8 cut(s) 149, 161, 193, 236, 291, 321, 693, 1066
MroI TCCGGA 1 cut(s) 250
MroXI GAANNNNTTC 1 cut(s) 42
MseI TTAA 5 cut(s) 378, 665, 1065, 1116, 1126
MslI CAYNNNNRTG 1 cut(s) 701
MspI CCGG 5 cut(s) 83, 113, 128, 251, 369
MspR9I CCNGG 2 cut(s) 99, 783
MvaI CCWGG 2 cut(s) 99, 783
MwoI GCNNNNNNNGC 3 cut(s) 266, 369, 997
NcoI CCATGG 1 cut(s) 392
NdeII GATC 6 cut(s) 160, 247, 621, 691, 721, 948
NlaIII CATG 4 cut(s) 207, 218, 275, 396
NlaIV GGNNCC 3 cut(s) 103, 126, 734
NmuCI GTSAC 1 cut(s) 703
NspI RCATGY 1 cut(s) 207
OliI CACNNNNGTG 1 cut(s) 701
PaeI GCATGC 1 cut(s) 207
PagI TCATGA 1 cut(s) 271
PdmI GAANNNNTTC 1 cut(s) 42
PfeI GAWTC 2 cut(s) 184, 219
PkrI GCNGC 3 cut(s) 262, 362, 848
PleI GAGTC 2 cut(s) 187, 1115
PpsI GAGTC 2 cut(s) 187, 1115
Psp124BI GAGCTC 1 cut(s) 258
Psp6I CCWGG 2 cut(s) 97, 781
PspGI CCWGG 2 cut(s) 97, 781
PspN4I GGNNCC 3 cut(s) 103, 126, 734
PspPI GGNCC 3 cut(s) 115, 680, 733
RsaI GTAC 4 cut(s) 50, 506, 590, 974
RsaNI GTAC 4 cut(s) 49, 505, 589, 973
RseI CAYNNNNRTG 1 cut(s) 701
SacI GAGCTC 1 cut(s) 258
SalI GTCGAC 1 cut(s) 194
SaqAI TTAA 5 cut(s) 378, 665, 1065, 1116, 1126
SatI GCNGC 3 cut(s) 261, 361, 847
Sau3AI GATC 6 cut(s) 160, 247, 621, 691, 721, 948
Sau96I GGNCC 3 cut(s) 115, 680, 733
ScaI AGTACT 1 cut(s) 590
SchI GAGTC 2 cut(s) 188, 1116
ScrFI CCNGG 2 cut(s) 99, 783
SduI GDGCHC 4 cut(s) 258, 325, 440, 1040
SfaNI GCATC 1 cut(s) 1036
SfcI CTRYAG 1 cut(s) 21
SinI GGWCC 2 cut(s) 115, 680
SmiMI CAYNNNNRTG 1 cut(s) 701
SmlI CTYRAG 1 cut(s) 1033
SmoI CTYRAG 1 cut(s) 1033
SphI GCATGC 1 cut(s) 207
Sse9I AATT 1 cut(s) 1004
SsiI CCGC 1 cut(s) 583
SspI AATATT 1 cut(s) 602
SspMI CTAG 3 cut(s) 357, 966, 1001
SstI GAGCTC 1 cut(s) 258
StyD4I CCNGG 2 cut(s) 97, 781
StyI CCWWGG 3 cut(s) 392, 965, 1096
TaaI ACNGT 2 cut(s) 344, 769
TaqI TCGA 6 cut(s) 30, 135, 182, 195, 450, 750
TasI AATT 1 cut(s) 1004
TatI WGTACW 1 cut(s) 588
TfiI GAWTC 2 cut(s) 184, 219
Tru1I TTAA 5 cut(s) 378, 665, 1065, 1116, 1126
Tru9I TTAA 5 cut(s) 378, 665, 1065, 1116, 1126
TscAI CASTG 5 cut(s) 160, 440, 675, 772, 958
TseFI GTSAC 1 cut(s) 703
TseI GCWGC 3 cut(s) 260, 360, 846
Tsp45I GTSAC 1 cut(s) 703
TspDTI ATGAA 3 cut(s) 64, 411, 704
TspGWI ACGGA 1 cut(s) 255
TspRI CASTG 5 cut(s) 160, 440, 675, 772, 958
VpaK11BI GGWCC 2 cut(s) 115, 680
XagI CCTNNNNNAGG 1 cut(s) 716
XapI RAATTY 1 cut(s) 1004
XceI RCATGY 1 cut(s) 207
XcmI CCANNNNNNNNNTGG 1 cut(s) 984
XmaJI CCTAGG 1 cut(s) 965
XmiI GTMKAC 1 cut(s) 195
XmnI GAANNNNTTC 1 cut(s) 42
XspI CTAG 3 cut(s) 357, 966, 1001
ZrmI AGTACT 1 cut(s) 590
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.