Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00499

Orthogroup ID

OG0000462

Physical Location & Seq

Genomic Coordinates Reverse (-)

18962 .. 20708

Gene Structure 1747 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G011370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1122 bp

ATGCCGGTGCCTGCTCCTCCTGAGCAAACCCCTGTGATTTTCGACTCCCAAGTCATTCGGTACCAATCCAACATCCCTTCCCAGTTCATATGGCCAGAACACGAGAAGCCGAGCCCCAACTGGTCGGACCTTCTCGCTCCGGCCATCGACCTCAACGGCTTCATCAGCGGCGACCCTGCCATCGTCGCGAACTCGATTCATATAGTCGACCAGGCCTGCAAGAAGCATGGATTCTTCCTCATTGTGAACCACGGAGTTGATCCGGAGCTCATTGCGAAAGCTCACGAGTACATGGACGTGTTCTTTGAGATGAAGCTCTCGGAGAAGCAAAGGGCTCAGAGGAAGGTTGGTGAGAGCTACGGTTATGCTAGTAGCTTCACCGGCAGGTTTAACTCCAAGCTTCCATGGAAAGAAACACTTTCTTTCAGGTACTCTGCTGAGAGCCAGAGCTCAACAGTCGTCAAGGACTACTTTGTGAATATGTTGGGTGAAGATTTCAGAGAAATGGGGAAGTTTTACCAAGAATACTGCGAAGTGATGAACGAACTATCCAAGGGGATACTAGAGCTATTGGGACTGAGCCTGGCAGTTGGGCGGGAGTACTTGAAAGAGTTCTACGAAGGAAACGATTCGATCATGAGGTTGAACTACTATCCAATGTGCCAAAGACCAGATTTAACACTGGGAACTGGGCCTCACTGTGATCCAACTTCCTTGACAATCCTTCATCAGGATCAAGTAGGGGGCCTTGAAGTGTTTTTCGATGAGAAGTGGCACGCCGTTACTCCTGTTCTTGGTTCTTTCGTTGTCAACATTGGTGATACTTTTATGGCTCTGAGCAATGGGATTTACAAGAGCTGCTTGCACAGGGCTGTGGTAAACAACAAAGCTGTAAGAAAATCTCTTACTTTCTTTCTGAATTCAAACAAGGACAGAGTAGTGACTCCACTAGCAACTTTGATCAGTGCTGATAACCCGAGGTTGTACCCGGACTTTACTTGGCCTACTCTGCTAGAGTTTACCCAGAAACAGTATAGGGCTGACAGGAGTACCATTGATGCTTTCTCGGACTGGATTAATAAGCAGAAGGGTGGAGAGGAAAAGAAAGACCAAGGAAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009653 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009791 GO:0009826 GO:0009908 GO:0009987 GO:0010033 GO:0010228 GO:0010476 GO:0010817 GO:0016043 GO:0016049 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016491 GO:0016705 GO:0016706 GO:0019752 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0032989 GO:0033993 GO:0040007 GO:0042221 GO:0042445 GO:0042446 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0045544 GO:0046394 GO:0048366 GO:0048367 GO:0048572 GO:0048573 GO:0048575 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051213 GO:0051716 GO:0055114 GO:0060560 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:0071840 GO:0090567 GO:0099402 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

2OG-FeII_Oxy DIOX_N

Protein Analysis

373

Amino Acids

42.4

Weight (kDa)

5.66

Isoelectric Point (pI)

37.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DIOX_N	PF14226	47 - 150	1e-21	non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy	PF03171	210 - 307	1.1e-33	2OG-Fe(II) oxygenase superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000462)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25420 AT4G25420 AT5G51810 AT5G51810
fragaria_vesca	FvH4_7g12600 FvH4_7g12610 FvH4_7g12610 FvH4_7g28670
malus_domestica	MD00G1003600.v1.1 MD00G1123700.v1.1 MD01G1192100.v1.1 MD02G1198000.v1.1
prunus_persica	Prupe.2G150700_v2.0.a1 Prupe.2G286800_v2.0.a1
pyrus_communis	pycom02g16160
rosa_chinensis	RchiOBHm_Chr1g0351591 RchiOBHm_Chr1g0351601 RchiOBHm_Chr1g0351611 RchiOBHm_Chr1g0351621 RchiOBHm_Chr1g0351631 RchiOBHm_Chr1g0353771 RchiOBHm_Chr1g0353791 RchiOBHm_Chr1g0376161
rosa_laevigata	RLG00000026625 RLG00000028255 RLG00000028258 RLG00000028394 RLG00000028395 RLG00000028396 RLG00000028397 RLG00000028399
rosa_multiflora	Rmu_sc0001144.1_g000008 Rmu_sc0001144.1_g000010 Rmu_sc0001144.1_g000018 Rmu_sc0001144.1_g000029 Rmu_sc0002300.1_g000001 Rmu_sc0002300.1_g000013 Rmu_sc0005947.1_g000014 Rmu_sc0020670.1_g000001 Rmu_ssc0000116.1_g000048
rosa_roxburghii	Rroxscaffold_4G00282340 Rroxscaffold_4G00301610 Rroxscaffold_4G00301650 Rroxscaffold_4G00303660 Rroxscaffold_4G00303670 Rroxscaffold_4G00303690 Rroxscaffold_4G00303710
rosa_rugosa	Rorug01G0218900 Rorug01G0219000.1 Rorug01G0219100 Rorug01G0219300 Rorug01G0219400 Rorug01G0219500 Rorug01G0238200 Rorug01G0238400 Rorug01G0394200
rosa_samantha	Rh1AG233600 Rh1AG234000 Rh1AG234100 Rh1AG234200 Rh1AG250000 Rh1AG250100 Rh1AG405700 Rh1BG204300 Rh1BG204500 Rh1BG204700 Rh1BG204800 Rh1BG220300 Rh1BG220600 Rh1BG369400 Rh1CG218200 Rh1CG218600 Rh1CG218700 Rh1CG218800 Rh1CG232600 Rh1CG382100 Rh1DG231200 Rh1DG231500 Rh1DG231700 Rh1DG231800 Rh1DG247200 Rh1DG247500 Rh1DG399000
rosa_wichuraiana	Rw0G011370 Rw1G020360 Rw1G020370 Rw1G020380 Rw1G020390 Rw1G021810 Rw1G021830 Rw1G035990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	50
Acc36I	ACCTGC	1 cut(s)	375
Acc65I	GGTACC	1 cut(s)	60
AccB1I	GGYRCC	2 cut(s)	7, 60
AccI	GTMKAC	1 cut(s)	207
AccII	CGCG	1 cut(s)	188
AccIII	TCCGGA	1 cut(s)	262
AciI	CCGC	2 cut(s)	168, 595
AclWI	GGATC	3 cut(s)	254, 698, 741
AcoI	YGGCCR	2 cut(s)	92, 141
AcsI	RAATTY	1 cut(s)	919
AfaI	GTAC	6 cut(s)	62, 290, 431, 602, 986, 1051
AfiI	CCNNNNNNNGG	2 cut(s)	730, 794
AflIII	ACRYGT	1 cut(s)	297
AgsI	TTSAA	4 cut(s)	607, 646, 752, 924
AjiI	CACGTC	1 cut(s)	298
AjnI	CCWGG	2 cut(s)	210, 582
AloI	GAACNNNNNNTCC	2 cut(s)	533, 565
Alw21I	GWGCWC	2 cut(s)	270, 452
AlwI	GGATC	3 cut(s)	254, 698, 741
Ama87I	CYCGRG	1 cut(s)	976
Aor13HI	TCCGGA	1 cut(s)	262
AoxI	GGCC	6 cut(s)	92, 141, 213, 692, 745, 1001
ApeKI	GCWGC	1 cut(s)	858
ApoI	RAATTY	1 cut(s)	919
ArsI	GACNNNNNNTTYG	2 cut(s)	287, 319
AseI	ATTAAT	1 cut(s)	1077
Asp700I	GAANNNNTTC	2 cut(s)	611, 628
Asp718I	GGTACC	1 cut(s)	60
AspS9I	GGNCC	3 cut(s)	127, 692, 745
AsuC2I	CCSGG	1 cut(s)	989
AsuHPI	GGTGA	4 cut(s)	362, 370, 500, 830
AvaI	CYCGRG	1 cut(s)	976
AvaII	GGWCC	1 cut(s)	127
BaeI	ACNNNNGTAYC	2 cut(s)	1033, 1066
BalI	TGGCCA	1 cut(s)	94
BanI	GGYRCC	2 cut(s)	7, 60
BanII	GRGCYC	4 cut(s)	116, 270, 337, 452
BauI	CACGAG	2 cut(s)	101, 284
Bbv12I	GWGCWC	2 cut(s)	270, 452
BbvI	GCAGC	1 cut(s)	845
BccI	CCATC	2 cut(s)	152, 188
BceAI	ACGGC	2 cut(s)	172, 764
BciT130I	CCWGG	2 cut(s)	212, 584
BciVI	GTATCC	1 cut(s)	552
BclI	TGATCA	1 cut(s)	960
BcnI	CCSGG	1 cut(s)	989
BfaI	CTAG	5 cut(s)	369, 563, 950, 1013, 1120
BfuAI	ACCTGC	1 cut(s)	375
BfuI	GTATCC	1 cut(s)	552
BisI	GCNGC	2 cut(s)	169, 859
BlsI	GCNGC	2 cut(s)	170, 860
BmcAI	AGTACT	1 cut(s)	602
Bme1390I	CCNGG	3 cut(s)	212, 584, 989
Bme18I	GGWCC	1 cut(s)	127
BmeT110I	CYCGRG	1 cut(s)	976
BmgBI	CACGTC	1 cut(s)	298
BmgT120I	GGNCC	3 cut(s)	127, 692, 745
BmiI	GGNNCC	3 cut(s)	9, 62, 746
BmrFI	CCNGG	3 cut(s)	212, 584, 989
BmrI	ACTGGG	3 cut(s)	76, 692, 699
BmsI	GCATC	1 cut(s)	1048
BmuI	ACTGGG	3 cut(s)	76, 692, 699
Bpu10I	CCTNAGC	1 cut(s)	21
BpuMI	CCSGG	1 cut(s)	989
BsaJI	CCNNGG	5 cut(s)	250, 404, 552, 977, 1111
BsaWI	WCCGGW	1 cut(s)	262
Bsc4I	CCNNNNNNNGG	2 cut(s)	730, 794
Bse118I	RCCGGY	2 cut(s)	4, 380
Bse1I	ACTGG	5 cut(s)	82, 125, 687, 694, 1076
Bse3DI	GCAATG	2 cut(s)	270, 847
BseAI	TCCGGA	1 cut(s)	262
BseBI	CCWGG	2 cut(s)	212, 584
BseDI	CCNNGG	5 cut(s)	250, 404, 552, 977, 1111
BseGI	GGATG	1 cut(s)	72
BseLI	CCNNNNNNNGG	2 cut(s)	730, 794
BseMI	GCAATG	2 cut(s)	270, 847
BseMII	CTCAG	5 cut(s)	12, 350, 429, 569, 827
BseNI	ACTGG	5 cut(s)	82, 125, 687, 694, 1076
BseRI	GAGGAG	1 cut(s)	6
BseXI	GCAGC	1 cut(s)	845
Bsh1236I	CGCG	1 cut(s)	188
BshFI	GGCC	6 cut(s)	94, 143, 215, 694, 747, 1003
BshNI	GGYRCC	2 cut(s)	7, 60
BsiHKAI	GWGCWC	2 cut(s)	270, 452
BsiHKCI	CYCGRG	1 cut(s)	976
BsiSI	CCGG	5 cut(s)	5, 140, 263, 381, 989
BslFI	GGGAC	1 cut(s)	588
BslI	CCNNNNNNNGG	2 cut(s)	730, 794
BsmFI	GGGAC	1 cut(s)	588
BsnI	GGCC	6 cut(s)	94, 143, 215, 694, 747, 1003
BsoBI	CYCGRG	1 cut(s)	976
Bsp1286I	GDGCHC	4 cut(s)	116, 270, 337, 452
Bsp13I	TCCGGA	1 cut(s)	262
Bsp143I	GATC	5 cut(s)	259, 633, 703, 733, 960
Bsp19I	CCATGG	1 cut(s)	404
Bsp68I	TCGCGA	1 cut(s)	188
BspACI	CCGC	2 cut(s)	168, 595
BspANI	GGCC	6 cut(s)	94, 143, 215, 694, 747, 1003
BspCNI	CTCAG	5 cut(s)	13, 349, 430, 570, 828
BspEI	TCCGGA	1 cut(s)	262
BspFNI	CGCG	1 cut(s)	188
BspHI	TCATGA	1 cut(s)	636
BspLI	GGNNCC	3 cut(s)	9, 62, 746
BspMI	ACCTGC	1 cut(s)	375
BspPI	GGATC	3 cut(s)	254, 698, 741
BspT107I	GGYRCC	2 cut(s)	7, 60
BsrDI	GCAATG	2 cut(s)	270, 847
BsrFI	RCCGGY	2 cut(s)	4, 380
BsrI	ACTGG	5 cut(s)	82, 125, 687, 694, 1076
BssAI	RCCGGY	2 cut(s)	4, 380
BssECI	CCNNGG	5 cut(s)	250, 404, 552, 977, 1111
BssMI	GATC	5 cut(s)	259, 633, 703, 733, 960
BssSI	CACGAG	2 cut(s)	101, 284
BssT1I	CCWWGG	3 cut(s)	404, 552, 1111
Bst2BI	CACGAG	2 cut(s)	101, 284
Bst2UI	CCWGG	2 cut(s)	212, 584
Bst4CI	ACNGT	4 cut(s)	362, 457, 701, 1032
BstC8I	GCNNGC	4 cut(s)	12, 217, 777, 863
BstDEI	CTNAG	5 cut(s)	21, 336, 438, 578, 836
BstDSI	CCRYGG	2 cut(s)	250, 404
BstENI	CCTNNNNNAGG	1 cut(s)	728
BstF5I	GGATG	1 cut(s)	72
BstFNI	CGCG	1 cut(s)	188
BstKTI	GATC	5 cut(s)	262, 636, 706, 736, 963
BstMBI	GATC	5 cut(s)	259, 633, 703, 733, 960
BstMWI	GCNNNNNNNGC	4 cut(s)	165, 185, 381, 1009
BstNI	CCWGG	2 cut(s)	212, 584
BstSCI	CCNGG	3 cut(s)	210, 582, 987
BstUI	CGCG	1 cut(s)	188
BstV1I	GCAGC	1 cut(s)	845
BsuI	GTATCC	1 cut(s)	552
BsuRI	GGCC	6 cut(s)	94, 143, 215, 694, 747, 1003
BtgI	CCRYGG	2 cut(s)	250, 404
BtrI	CACGTC	1 cut(s)	298
BtsCI	GGATG	1 cut(s)	72
BtsIMutI	CAGTG	3 cut(s)	680, 697, 970
BtuMI	TCGCGA	1 cut(s)	188
BveI	ACCTGC	1 cut(s)	375
Cac8I	GCNNGC	4 cut(s)	12, 217, 777, 863
CciI	TCATGA	1 cut(s)	636
Cfr10I	RCCGGY	2 cut(s)	4, 380
Cfr13I	GGNCC	3 cut(s)	127, 692, 745
Csp6I	GTAC	6 cut(s)	61, 289, 430, 601, 985, 1050
CviAII	CATG	4 cut(s)	227, 292, 405, 637
CviQI	GTAC	6 cut(s)	61, 289, 430, 601, 985, 1050
DdeI	CTNAG	5 cut(s)	21, 336, 438, 578, 836
DpnI	GATC	5 cut(s)	261, 635, 705, 735, 962
DpnII	GATC	5 cut(s)	259, 633, 703, 733, 960
DrdI	GACNNNNNNGTC	1 cut(s)	50
DseDI	GACNNNNNNGTC	1 cut(s)	50
EaeI	YGGCCR	2 cut(s)	92, 141
Ecl136II	GAGCTC	2 cut(s)	268, 450
Eco130I	CCWWGG	3 cut(s)	404, 552, 1111
Eco147I	AGGCCT	1 cut(s)	215
Eco24I	GRGCYC	4 cut(s)	116, 270, 337, 452
Eco47I	GGWCC	1 cut(s)	127
Eco53kI	GAGCTC	2 cut(s)	268, 450
Eco88I	CYCGRG	1 cut(s)	976
EcoICRI	GAGCTC	2 cut(s)	268, 450
EcoNI	CCTNNNNNAGG	1 cut(s)	728
EcoO109I	RGGNCCY	1 cut(s)	745
EcoRI	GAATTC	1 cut(s)	919
EcoRII	CCWGG	2 cut(s)	210, 582
EcoT14I	CCWWGG	3 cut(s)	404, 552, 1111
EcoT38I	GRGCYC	4 cut(s)	116, 270, 337, 452
ErhI	CCWWGG	3 cut(s)	404, 552, 1111
FaeI	CATG	4 cut(s)	230, 295, 408, 640
FalI	AAGNNNNNCTT	6 cut(s)	402, 434, 455, 487, 845, 877
FaqI	GGGAC	1 cut(s)	588
FatI	CATG	4 cut(s)	226, 291, 404, 636
FauI	CCCGC	1 cut(s)	588
FauNDI	CATATG	1 cut(s)	89
FbaI	TGATCA	1 cut(s)	960
FblI	GTMKAC	1 cut(s)	207
Fnu4HI	GCNGC	2 cut(s)	169, 859
FokI	GGATG	1 cut(s)	59
FriOI	GRGCYC	4 cut(s)	116, 270, 337, 452
Fsp4HI	GCNGC	2 cut(s)	169, 859
FspBI	CTAG	5 cut(s)	369, 563, 950, 1013, 1120
GluI	GCNGC	2 cut(s)	169, 859
HaeIII	GGCC	6 cut(s)	94, 143, 215, 694, 747, 1003
HapII	CCGG	5 cut(s)	5, 140, 263, 381, 989
Hin1II	CATG	4 cut(s)	230, 295, 408, 640
HincII	GTYRAC	2 cut(s)	208, 811
HindII	GTYRAC	2 cut(s)	208, 811
HindIII	AAGCTT	1 cut(s)	398
HinfI	GANTC	5 cut(s)	44, 196, 231, 629, 943
HpaII	CCGG	5 cut(s)	5, 140, 263, 381, 989
HphI	GGTGA	4 cut(s)	362, 370, 500, 830
Hpy166II	GTNNAC	5 cut(s)	208, 247, 811, 880, 1020
Hpy188I	TCNGA	7 cut(s)	127, 322, 339, 500, 837, 918, 1069
Hpy188III	TCNNGA	6 cut(s)	20, 187, 263, 284, 637, 731
Hpy8I	GTNNAC	5 cut(s)	208, 247, 811, 880, 1020
Hpy99I	CGWCG	1 cut(s)	188
HpyAV	CCTTC	6 cut(s)	87, 140, 337, 614, 734, 1081
HpyCH4III	ACNGT	4 cut(s)	362, 457, 701, 1032
HpyCH4IV	ACGT	1 cut(s)	297
HpyCH4V	TGCA	2 cut(s)	219, 865
HpyF10VI	GCNNNNNNNGC	4 cut(s)	165, 185, 381, 1009
HpyF3I	CTNAG	5 cut(s)	21, 336, 438, 578, 836
HpySE526I	ACGT	1 cut(s)	297
Hsp92II	CATG	4 cut(s)	230, 295, 408, 640
Kpn2I	TCCGGA	1 cut(s)	262
KpnI	GGTACC	1 cut(s)	64
Ksp22I	TGATCA	1 cut(s)	960
Kzo9I	GATC	5 cut(s)	259, 633, 703, 733, 960
LmnI	GCTCC	3 cut(s)	19, 142, 265
Lsp1109I	GCAGC	1 cut(s)	845
LweI	GCATC	1 cut(s)	1048
MaeI	CTAG	5 cut(s)	369, 563, 950, 1013, 1120
MaeII	ACGT	1 cut(s)	297
MaeIII	GTNAC	2 cut(s)	781, 940
MalI	GATC	5 cut(s)	261, 635, 705, 735, 962
MboI	GATC	5 cut(s)	259, 633, 703, 733, 960
MboII	GAAGA	2 cut(s)	226, 503
MhlI	GDGCHC	4 cut(s)	116, 270, 337, 452
MlsI	TGGCCA	1 cut(s)	94
MluCI	AATT	1 cut(s)	919
MluNI	TGGCCA	1 cut(s)	94
MlyI	GAGTC	2 cut(s)	38, 937
MmeI	TCCRAC	3 cut(s)	93, 105, 731
MnlI	CCTC	8 cut(s)	27, 161, 248, 333, 633, 705, 972, 1090
Mox20I	TGGCCA	1 cut(s)	94
MroI	TCCGGA	1 cut(s)	262
MroXI	GAANNNNTTC	2 cut(s)	611, 628
MscI	TGGCCA	1 cut(s)	94
MseI	TTAA	3 cut(s)	390, 677, 1077
MslI	CAYNNNNRTG	1 cut(s)	296
Msp20I	TGGCCA	1 cut(s)	94
MspA1I	CMGCKG	1 cut(s)	168
MspI	CCGG	5 cut(s)	5, 140, 263, 381, 989
MspR9I	CCNGG	3 cut(s)	212, 584, 989
MvaI	CCWGG	2 cut(s)	212, 584
MvnI	CGCG	1 cut(s)	188
MwoI	GCNNNNNNNGC	4 cut(s)	165, 185, 381, 1009
NciI	CCSGG	1 cut(s)	989
NcoI	CCATGG	1 cut(s)	404
NdeI	CATATG	1 cut(s)	89
NdeII	GATC	5 cut(s)	259, 633, 703, 733, 960
NlaIII	CATG	4 cut(s)	230, 295, 408, 640
NlaIV	GGNNCC	3 cut(s)	9, 62, 746
NmeAIII	GCCGAG	1 cut(s)	135
NmuCI	GTSAC	1 cut(s)	940
NruI	TCGCGA	1 cut(s)	188
PagI	TCATGA	1 cut(s)	636
PceI	AGGCCT	1 cut(s)	215
PcsI	WCGNNNNNNNCGW	1 cut(s)	624
PdmI	GAANNNNTTC	2 cut(s)	611, 628
PfeI	GAWTC	3 cut(s)	196, 231, 629
PkrI	GCNGC	2 cut(s)	170, 860
PleI	GAGTC	2 cut(s)	38, 937
PpsI	GAGTC	2 cut(s)	38, 937
PshBI	ATTAAT	1 cut(s)	1077
Psp124BI	GAGCTC	2 cut(s)	270, 452
Psp6I	CCWGG	2 cut(s)	210, 582
PspGI	CCWGG	2 cut(s)	210, 582
PspN4I	GGNNCC	3 cut(s)	9, 62, 746
PspPI	GGNCC	3 cut(s)	127, 692, 745
RruI	TCGCGA	1 cut(s)	188
RsaI	GTAC	6 cut(s)	62, 290, 431, 602, 986, 1051
RsaNI	GTAC	6 cut(s)	61, 289, 430, 601, 985, 1050
RseI	CAYNNNNRTG	1 cut(s)	296
SacI	GAGCTC	2 cut(s)	270, 452
SalI	GTCGAC	1 cut(s)	206
SaqAI	TTAA	3 cut(s)	390, 677, 1077
SatI	GCNGC	2 cut(s)	169, 859
Sau3AI	GATC	5 cut(s)	259, 633, 703, 733, 960
Sau96I	GGNCC	3 cut(s)	127, 692, 745
ScaI	AGTACT	1 cut(s)	602
SchI	GAGTC	2 cut(s)	38, 937
ScrFI	CCNGG	3 cut(s)	212, 584, 989
SduI	GDGCHC	4 cut(s)	116, 270, 337, 452
SfaNI	GCATC	1 cut(s)	1048
SinI	GGWCC	1 cut(s)	127
SmiMI	CAYNNNNRTG	1 cut(s)	296
Sse9I	AATT	1 cut(s)	919
SseBI	AGGCCT	1 cut(s)	215
SsiI	CCGC	2 cut(s)	168, 595
SspMI	CTAG	5 cut(s)	369, 563, 950, 1013, 1120
SstI	GAGCTC	2 cut(s)	270, 452
StuI	AGGCCT	1 cut(s)	215
StyD4I	CCNGG	3 cut(s)	210, 582, 987
StyI	CCWWGG	3 cut(s)	404, 552, 1111
TaaI	ACNGT	4 cut(s)	362, 457, 701, 1032
TaiI	ACGT	1 cut(s)	300
TaqI	TCGA	6 cut(s)	42, 147, 194, 207, 632, 762
TasI	AATT	1 cut(s)	919
TatI	WGTACW	2 cut(s)	288, 600
TauI	GCSGC	1 cut(s)	171
TfiI	GAWTC	3 cut(s)	196, 231, 629
Tru1I	TTAA	3 cut(s)	390, 677, 1077
Tru9I	TTAA	3 cut(s)	390, 677, 1077
TscAI	CASTG	3 cut(s)	687, 704, 970
TseFI	GTSAC	1 cut(s)	940
TseI	GCWGC	1 cut(s)	858
Tsp45I	GTSAC	1 cut(s)	940
TspDTI	ATGAA	6 cut(s)	76, 151, 188, 326, 554, 716
TspGWI	ACGGA	1 cut(s)	267
TspRI	CASTG	3 cut(s)	687, 704, 970
VpaK11BI	GGWCC	1 cut(s)	127
VspI	ATTAAT	1 cut(s)	1077
XagI	CCTNNNNNAGG	1 cut(s)	728
XapI	RAATTY	1 cut(s)	919
XmiI	GTMKAC	1 cut(s)	207
XmnI	GAANNNNTTC	2 cut(s)	611, 628
XspI	CTAG	5 cut(s)	369, 563, 950, 1013, 1120
ZrmI	AGTACT	1 cut(s)	602

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.