MD02G1198000.v1.1

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
19262856 .. 19264608
1753 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1198000.v1.1.491

Sequence Viewer

Length: 1131 bp
ATGCTAAGCATGCCAATGCCTCCTCAACATCTCCCACCAATGAATGAAACCAACAAAGAAAATGAAGAAACCCCCTTGGTGTTTGATGCTTCAGTTGCTCAGTACCAATCCAGCATACCCTCCAAGTTCATATGGCCCGACCACGAGAAGCCCTGCTCCGAGTCGCCAGAGCTTCCAGCTCCTCTCGTCGACCTGAAAGGCTTTCTCTCAGGGGATACGTGTGAGGTATTAAATGCAACTCGTTTGGTGGATGAGGCATGCAAGAAGCATGGTTTTTTTCTCATTGTTAACCATGGAGTTGATTTGCAACTCGTAGGAAAAGCTCATGAGTACATGGACTCCTTCTTTGGTATGCAACTCTCGCAGAAGCAAAGGGCTCAGAGAAAGGCTGGTGAGCACTGTGGATATGCCAGTAGCTTCGTTGGCAGGTTCTCCTCCAAACTTCCATGGAAAGAAACACTTTCTTTCAGATATAGTGCCGATAACCAGTCCTCGGTCAATGACTATTTTGTGAACGTGATGGGTGAAGATTTCAGAGATTTCGGGAAGGTTTACCAAGAATACTGTGATGCCATGAACAACCTCTCCAATGCGATAATGGAGCTACTCGGAATGAGCCTAGGCGTTGGACGAAACTATTTCAAAGAGTTCTTCGAAGGAAATGATTCGATCATGAGGTTGAACTACTACCCAATGTGCCAAAAACCAGACTTAACACTAGGAACCGGGCCTCACTGTGATCCCACATCCTTAACAATCCTTCATCAGGATCAAGTCGGCGGACTTCAAGTGTTCGTAGATGATAAATGGCACTCCGTTACTCCTAAGCTTGACGCTTTCGTCGTCAACATTGGCGATACATTTATGGCTCTATCAAATGGGATTTACAAGAGCTGCTTGCACAGAGCAGTGGTAAACAACAAAACTGTGAGGAAATCTCTCACCTTCTTCCTCTGTCCCAAAAAGGACAGAGTGGTGACCCCACCGAGAGGCTTGGTCGATTCCAATAGCCCCAGGAAGTACCCTGACTTCACCTGGCCTACTTTCCTAGAATTTACGCAGAAACACTACCGCGCCGATATGAGGACCCTGGACGCCTTCTCCGACTGGATTAGAACTACAACAAACTAA

Protein Analysis

377

Amino Acids

42.76

Weight (kDa)

6.13

Isoelectric Point (pI)

30.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 61 - 169 2.9e-21 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 222 - 320 2.4e-35 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000462)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25420 AT4G25420 AT5G51810 AT5G51810
fragaria_vesca FvH4_7g12600 FvH4_7g12610 FvH4_7g12610 FvH4_7g28670
malus_domestica MD00G1003600.v1.1 MD00G1123700.v1.1 MD01G1192100.v1.1 MD02G1198000.v1.1
prunus_persica Prupe.2G150700_v2.0.a1 Prupe.2G286800_v2.0.a1
pyrus_communis pycom02g16160
rosa_chinensis RchiOBHm_Chr1g0351591 RchiOBHm_Chr1g0351601 RchiOBHm_Chr1g0351611 RchiOBHm_Chr1g0351621 RchiOBHm_Chr1g0351631 RchiOBHm_Chr1g0353771 RchiOBHm_Chr1g0353791 RchiOBHm_Chr1g0376161
rosa_laevigata RLG00000026625 RLG00000028255 RLG00000028258 RLG00000028394 RLG00000028395 RLG00000028396 RLG00000028397 RLG00000028399
rosa_multiflora Rmu_sc0001144.1_g000008 Rmu_sc0001144.1_g000010 Rmu_sc0001144.1_g000018 Rmu_sc0001144.1_g000029 Rmu_sc0002300.1_g000001 Rmu_sc0002300.1_g000013 Rmu_sc0005947.1_g000014 Rmu_sc0020670.1_g000001 Rmu_ssc0000116.1_g000048
rosa_roxburghii Rroxscaffold_4G00282340 Rroxscaffold_4G00301610 Rroxscaffold_4G00301650 Rroxscaffold_4G00303660 Rroxscaffold_4G00303670 Rroxscaffold_4G00303690 Rroxscaffold_4G00303710
rosa_rugosa Rorug01G0218900 Rorug01G0219000.1 Rorug01G0219100 Rorug01G0219300 Rorug01G0219400 Rorug01G0219500 Rorug01G0238200 Rorug01G0238400 Rorug01G0394200
rosa_samantha Rh1AG233600 Rh1AG234000 Rh1AG234100 Rh1AG234200 Rh1AG250000 Rh1AG250100 Rh1AG405700 Rh1BG204300 Rh1BG204500 Rh1BG204700 Rh1BG204800 Rh1BG220300 Rh1BG220600 Rh1BG369400 Rh1CG218200 Rh1CG218600 Rh1CG218700 Rh1CG218800 Rh1CG232600 Rh1CG382100 Rh1DG231200 Rh1DG231500 Rh1DG231700 Rh1DG231800 Rh1DG247200 Rh1DG247500 Rh1DG399000
rosa_wichuraiana Rw0G011370 Rw1G020360 Rw1G020370 Rw1G020380 Rw1G020390 Rw1G021810 Rw1G021830 Rw1G035990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 839
Acc36I ACCTGC 1 cut(s) 417
AccI GTMKAC 1 cut(s) 189
AccII CGCG 1 cut(s) 1074
AciI CCGC 2 cut(s) 780, 1072
AclWI GGATC 2 cut(s) 734, 777
AcsI RAATTY 1 cut(s) 1052
AcuI CTGAAG 1 cut(s) 75
AcyI GRCGYC 1 cut(s) 1095
AfaI GTAC 3 cut(s) 104, 332, 1022
AfiI CCNNNNNNNGG 4 cut(s) 493, 766, 989, 1083
AflIII ACRYGT 1 cut(s) 218
AgsI TTSAA 3 cut(s) 643, 682, 788
AjnI CCWGG 3 cut(s) 1013, 1034, 1089
AloI GAACNNNNNNTCC 2 cut(s) 569, 601
AluBI AGCT 7 cut(s) 172, 179, 323, 417, 604, 829, 894
AluI AGCT 7 cut(s) 172, 179, 323, 417, 604, 829, 894
Alw21I GWGCWC 1 cut(s) 399
AlwI GGATC 2 cut(s) 734, 777
AoxI GGCC 3 cut(s) 134, 728, 1037
ApeKI GCWGC 1 cut(s) 894
ApoI RAATTY 1 cut(s) 1052
ArsI GACNNNNNNTTYG 2 cut(s) 329, 361
Asp700I GAANNNNTTC 1 cut(s) 664
AspA2I CCTAGG 1 cut(s) 619
AspLEI GCGC 1 cut(s) 1076
AspS9I GGNCC 3 cut(s) 135, 728, 1086
AsuC2I CCSGG 1 cut(s) 727
AsuHPI GGTGA 5 cut(s) 404, 536, 934, 988, 1024
AsuII TTCGAA 1 cut(s) 654
AvaII GGWCC 1 cut(s) 1086
AvrII CCTAGG 1 cut(s) 619
BanII GRGCYC 1 cut(s) 379
BarI GAAGNNNNNNTAC 2 cut(s) 1013, 1045
BauI CACGAG 1 cut(s) 143
Bbv12I GWGCWC 1 cut(s) 399
BbvI GCAGC 1 cut(s) 881
BccI CCATC 1 cut(s) 514
BciT130I CCWGG 3 cut(s) 1015, 1036, 1091
BciVI GTATCC 1 cut(s) 208
BcnI CCSGG 1 cut(s) 727
BfaI CTAG 3 cut(s) 620, 719, 1049
BfuAI ACCTGC 1 cut(s) 417
BfuI GTATCC 1 cut(s) 208
BisI GCNGC 1 cut(s) 895
BlnI CCTAGG 1 cut(s) 619
BlpI GCTNAGC 1 cut(s) 5
BlsI GCNGC 1 cut(s) 896
Bme1390I CCNGG 4 cut(s) 727, 1015, 1036, 1091
Bme18I GGWCC 1 cut(s) 1086
BmgT120I GGNCC 3 cut(s) 135, 728, 1086
BmiI GGNNCC 2 cut(s) 724, 1088
BmrFI CCNGG 4 cut(s) 727, 1015, 1036, 1091
BmsI GCATC 2 cut(s) 76, 559
BplI GAGNNNNNCTC 2 cut(s) 922, 954
Bpu10I CCTNAGC 1 cut(s) 825
Bpu1102I GCTNAGC 1 cut(s) 5
Bpu14I TTCGAA 1 cut(s) 654
BpuMI CCSGG 1 cut(s) 727
BsaAI YACGTR 1 cut(s) 219
BsaHI GRCGYC 1 cut(s) 1095
BsaJI CCNNGG 7 cut(s) 75, 292, 446, 492, 619, 1013, 1089
BsaXI ACNNNNNCTCC 6 cut(s) 323, 353, 569, 599, 1085, 1115
Bsc4I CCNNNNNNNGG 4 cut(s) 493, 766, 989, 1083
Bse1I ACTGG 3 cut(s) 411, 487, 1112
BseBI CCWGG 3 cut(s) 1015, 1036, 1091
BseDI CCNNGG 7 cut(s) 75, 292, 446, 492, 619, 1013, 1089
BseGI GGATG 2 cut(s) 256, 746
BseLI CCNNNNNNNGG 4 cut(s) 493, 766, 989, 1083
BseMII CTCAG 3 cut(s) 113, 222, 392
BseNI ACTGG 3 cut(s) 411, 487, 1112
BseRI GAGGAG 3 cut(s) 12, 171, 424
BseXI GCAGC 1 cut(s) 881
Bsh1236I CGCG 1 cut(s) 1074
BshFI GGCC 3 cut(s) 136, 730, 1039
BsiHKAI GWGCWC 1 cut(s) 399
BsiSI CCGG 1 cut(s) 726
BslFI GGGAC 1 cut(s) 942
BslI CCNNNNNNNGG 4 cut(s) 493, 766, 989, 1083
BsmFI GGGAC 1 cut(s) 942
BsnI GGCC 3 cut(s) 136, 730, 1039
Bsp119I TTCGAA 1 cut(s) 654
Bsp1286I GDGCHC 2 cut(s) 379, 399
Bsp143I GATC 3 cut(s) 669, 739, 769
Bsp1720I GCTNAGC 1 cut(s) 5
Bsp19I CCATGG 2 cut(s) 292, 446
BspACI CCGC 2 cut(s) 780, 1072
BspANI GGCC 3 cut(s) 136, 730, 1039
BspCNI CTCAG 3 cut(s) 112, 221, 391
BspFNI CGCG 1 cut(s) 1074
BspHI TCATGA 2 cut(s) 325, 672
BspLI GGNNCC 2 cut(s) 724, 1088
BspMI ACCTGC 1 cut(s) 417
BspPI GGATC 2 cut(s) 734, 777
BspT104I TTCGAA 1 cut(s) 654
BsrI ACTGG 3 cut(s) 411, 487, 1112
BssECI CCNNGG 7 cut(s) 75, 292, 446, 492, 619, 1013, 1089
BssMI GATC 3 cut(s) 669, 739, 769
BssNI GRCGYC 1 cut(s) 1095
BssSI CACGAG 1 cut(s) 143
BssT1I CCWWGG 4 cut(s) 75, 292, 446, 619
Bst2BI CACGAG 1 cut(s) 143
Bst2UI CCWGG 3 cut(s) 1015, 1036, 1091
Bst4CI ACNGT 4 cut(s) 401, 566, 737, 928
BstACI GRCGYC 1 cut(s) 1095
BstBAI YACGTR 1 cut(s) 219
BstBI TTCGAA 1 cut(s) 654
BstC8I GCNNGC 3 cut(s) 11, 259, 899
BstDEI CTNAG 5 cut(s) 5, 99, 208, 378, 825
BstDSI CCRYGG 2 cut(s) 292, 446
BstEII GGTNACC 1 cut(s) 976
BstENI CCTNNNNNAGG 1 cut(s) 764
BstF5I GGATG 2 cut(s) 256, 746
BstFNI CGCG 1 cut(s) 1074
BstHHI GCGC 1 cut(s) 1076
BstKTI GATC 3 cut(s) 672, 742, 772
BstMBI GATC 3 cut(s) 669, 739, 769
BstMWI GCNNNNNNNGC 4 cut(s) 10, 95, 361, 423
BstNI CCWGG 3 cut(s) 1015, 1036, 1091
BstNSI RCATGY 2 cut(s) 13, 261
BstPI GGTNACC 1 cut(s) 976
BstSCI CCNGG 4 cut(s) 725, 1013, 1034, 1089
BstUI CGCG 1 cut(s) 1074
BstV1I GCAGC 1 cut(s) 881
BsuI GTATCC 1 cut(s) 208
BsuRI GGCC 3 cut(s) 136, 730, 1039
BtgI CCRYGG 2 cut(s) 292, 446
BtsCI GGATG 2 cut(s) 256, 746
BtsI GCAGTG 1 cut(s) 915
BtsIMutI CAGTG 3 cut(s) 397, 733, 915
BveI ACCTGC 1 cut(s) 417
Cac8I GCNNGC 3 cut(s) 11, 259, 899
CciI TCATGA 2 cut(s) 325, 672
CfoI GCGC 1 cut(s) 1076
Cfr13I GGNCC 3 cut(s) 135, 728, 1086
CseI GACGC 2 cut(s) 842, 1103
Csp6I GTAC 3 cut(s) 103, 331, 1021
CviAII CATG 9 cut(s) 10, 258, 269, 293, 326, 334, 447, 574, 673
CviQI GTAC 3 cut(s) 103, 331, 1021
DdeI CTNAG 5 cut(s) 5, 99, 208, 378, 825
DpnI GATC 3 cut(s) 671, 741, 771
DpnII GATC 3 cut(s) 669, 739, 769
DrdI GACNNNNNNGTC 1 cut(s) 839
DseDI GACNNNNNNGTC 1 cut(s) 839
EciI GGCGGA 1 cut(s) 795
Eco130I CCWWGG 4 cut(s) 75, 292, 446, 619
Eco24I GRGCYC 1 cut(s) 379
Eco47I GGWCC 1 cut(s) 1086
Eco57I CTGAAG 1 cut(s) 75
Eco91I GGTNACC 1 cut(s) 976
EcoNI CCTNNNNNAGG 1 cut(s) 764
EcoO109I RGGNCCY 1 cut(s) 1086
EcoO65I GGTNACC 1 cut(s) 976
EcoRII CCWGG 3 cut(s) 1013, 1034, 1089
EcoT14I CCWWGG 4 cut(s) 75, 292, 446, 619
EcoT38I GRGCYC 1 cut(s) 379
ErhI CCWWGG 4 cut(s) 75, 292, 446, 619
FaeI CATG 9 cut(s) 13, 261, 272, 296, 329, 337, 450, 577, 676
FalI AAGNNNNNCTT 4 cut(s) 444, 476, 881, 913
FaqI GGGAC 1 cut(s) 942
FatI CATG 9 cut(s) 9, 257, 268, 292, 325, 333, 446, 573, 672
FauNDI CATATG 1 cut(s) 131
FblI GTMKAC 1 cut(s) 189
Fnu4HI GCNGC 1 cut(s) 895
FokI GGATG 2 cut(s) 263, 733
FriOI GRGCYC 1 cut(s) 379
Fsp4HI GCNGC 1 cut(s) 895
FspBI CTAG 3 cut(s) 620, 719, 1049
GlaI GCGC 1 cut(s) 1075
GluI GCNGC 1 cut(s) 895
HaeIII GGCC 3 cut(s) 136, 730, 1039
HapII CCGG 1 cut(s) 726
HgaI GACGC 2 cut(s) 842, 1103
HhaI GCGC 1 cut(s) 1076
Hin1I GRCGYC 1 cut(s) 1095
Hin1II CATG 9 cut(s) 13, 261, 272, 296, 329, 337, 450, 577, 676
Hin6I GCGC 1 cut(s) 1074
HinP1I GCGC 1 cut(s) 1074
HincII GTYRAC 3 cut(s) 190, 289, 847
HindII GTYRAC 3 cut(s) 190, 289, 847
HindIII AAGCTT 1 cut(s) 827
HinfI GANTC 4 cut(s) 161, 338, 665, 1001
HpaI GTTAAC 1 cut(s) 289
HpaII CCGG 1 cut(s) 726
HphI GGTGA 5 cut(s) 404, 536, 934, 988, 1024
Hpy166II GTNNAC 6 cut(s) 190, 289, 514, 553, 847, 916
Hpy188I TCNGA 6 cut(s) 160, 381, 470, 536, 611, 1105
Hpy188III TCNNGA 4 cut(s) 326, 544, 673, 767
Hpy8I GTNNAC 6 cut(s) 190, 289, 514, 553, 847, 916
Hpy99I CGWCG 2 cut(s) 191, 845
HpyAV CCTTC 6 cut(s) 352, 541, 650, 770, 955, 1108
HpyCH4III ACNGT 4 cut(s) 401, 566, 737, 928
HpyCH4IV ACGT 2 cut(s) 218, 516
HpyCH4V TGCA 5 cut(s) 236, 261, 307, 355, 901
HpyF10VI GCNNNNNNNGC 4 cut(s) 10, 95, 361, 423
HpyF3I CTNAG 5 cut(s) 5, 99, 208, 378, 825
HpySE526I ACGT 2 cut(s) 218, 516
Hsp92I GRCGYC 1 cut(s) 1095
Hsp92II CATG 9 cut(s) 13, 261, 272, 296, 329, 337, 450, 577, 676
HspAI GCGC 1 cut(s) 1074
KspAI GTTAAC 1 cut(s) 289
Kzo9I GATC 3 cut(s) 669, 739, 769
LmnI GCTCC 3 cut(s) 161, 184, 601
Lsp1109I GCAGC 1 cut(s) 881
LweI GCATC 2 cut(s) 76, 559
MaeI CTAG 3 cut(s) 620, 719, 1049
MaeII ACGT 2 cut(s) 218, 516
MaeIII GTNAC 2 cut(s) 817, 976
MalI GATC 3 cut(s) 671, 741, 771
MboI GATC 3 cut(s) 669, 739, 769
MboII GAAGA 4 cut(s) 77, 539, 643, 940
MhlI GDGCHC 2 cut(s) 379, 399
MluCI AATT 1 cut(s) 1052
MlyI GAGTC 2 cut(s) 170, 332
MmeI TCCRAC 2 cut(s) 607, 1128
MroXI GAANNNNTTC 1 cut(s) 664
MseI TTAA 4 cut(s) 230, 288, 713, 752
MslI CAYNNNNRTG 1 cut(s) 14
MspI CCGG 1 cut(s) 726
MspR9I CCNGG 4 cut(s) 727, 1015, 1036, 1091
MvaI CCWGG 3 cut(s) 1015, 1036, 1091
MvnI CGCG 1 cut(s) 1074
MwoI GCNNNNNNNGC 4 cut(s) 10, 95, 361, 423
NciI CCSGG 1 cut(s) 727
NcoI CCATGG 2 cut(s) 292, 446
NdeI CATATG 1 cut(s) 131
NdeII GATC 3 cut(s) 669, 739, 769
NlaIII CATG 9 cut(s) 13, 261, 272, 296, 329, 337, 450, 577, 676
NlaIV GGNNCC 2 cut(s) 724, 1088
NmuCI GTSAC 1 cut(s) 976
NspI RCATGY 2 cut(s) 13, 261
NspV TTCGAA 1 cut(s) 654
PaeI GCATGC 2 cut(s) 13, 261
PagI TCATGA 2 cut(s) 325, 672
PcsI WCGNNNNNNNCGW 2 cut(s) 840, 1101
PdmI GAANNNNTTC 1 cut(s) 664
PfeI GAWTC 2 cut(s) 665, 1001
PkrI GCNGC 1 cut(s) 896
PleI GAGTC 2 cut(s) 169, 332
PpsI GAGTC 2 cut(s) 169, 332
Ppu21I YACGTR 1 cut(s) 219
PpuMI RGGWCCY 1 cut(s) 1086
Psp5II RGGWCCY 1 cut(s) 1086
Psp6I CCWGG 3 cut(s) 1013, 1034, 1089
PspEI GGTNACC 1 cut(s) 976
PspGI CCWGG 3 cut(s) 1013, 1034, 1089
PspN4I GGNNCC 2 cut(s) 724, 1088
PspPI GGNCC 3 cut(s) 135, 728, 1086
PspPPI RGGWCCY 1 cut(s) 1086
RsaI GTAC 3 cut(s) 104, 332, 1022
RsaNI GTAC 3 cut(s) 103, 331, 1021
RseI CAYNNNNRTG 1 cut(s) 14
SalI GTCGAC 1 cut(s) 188
SaqAI TTAA 4 cut(s) 230, 288, 713, 752
SatI GCNGC 1 cut(s) 895
Sau3AI GATC 3 cut(s) 669, 739, 769
Sau96I GGNCC 3 cut(s) 135, 728, 1086
SchI GAGTC 2 cut(s) 170, 332
ScrFI CCNGG 4 cut(s) 727, 1015, 1036, 1091
SduI GDGCHC 2 cut(s) 379, 399
SfaNI GCATC 2 cut(s) 76, 559
SfuI TTCGAA 1 cut(s) 654
SinI GGWCC 1 cut(s) 1086
SmiMI CAYNNNNRTG 1 cut(s) 14
SphI GCATGC 2 cut(s) 13, 261
Sse9I AATT 1 cut(s) 1052
SsiI CCGC 2 cut(s) 780, 1072
SspMI CTAG 3 cut(s) 620, 719, 1049
StyD4I CCNGG 4 cut(s) 725, 1013, 1034, 1089
StyI CCWWGG 4 cut(s) 75, 292, 446, 619
TaaI ACNGT 4 cut(s) 401, 566, 737, 928
TaiI ACGT 2 cut(s) 221, 519
TaqI TCGA 4 cut(s) 189, 654, 668, 999
TaqII GACCGA 1 cut(s) 484
TasI AATT 1 cut(s) 1052
TatI WGTACW 1 cut(s) 330
TfiI GAWTC 2 cut(s) 665, 1001
Tru1I TTAA 4 cut(s) 230, 288, 713, 752
Tru9I TTAA 4 cut(s) 230, 288, 713, 752
TscAI CASTG 3 cut(s) 404, 740, 915
TseFI GTSAC 1 cut(s) 976
TseI GCWGC 1 cut(s) 894
Tsp45I GTSAC 1 cut(s) 976
TspDTI ATGAA 6 cut(s) 56, 60, 78, 118, 590, 752
TspGWI ACGGA 1 cut(s) 805
TspRI CASTG 3 cut(s) 404, 740, 915
VpaK11BI GGWCC 1 cut(s) 1086
XagI CCTNNNNNAGG 1 cut(s) 764
XapI RAATTY 1 cut(s) 1052
XceI RCATGY 2 cut(s) 13, 261
XcmI CCANNNNNNNNNTGG 1 cut(s) 595
XmaJI CCTAGG 1 cut(s) 619
XmiI GTMKAC 1 cut(s) 189
XmnI GAANNNNTTC 1 cut(s) 664
XspI CTAG 3 cut(s) 620, 719, 1049
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.