Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0000462

Physical Location & Seq

Genomic Coordinates Forward (+)

44487579 .. 44490070

Gene Structure 2492 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG231800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1131 bp

ATGTTGGCCATGCCGGTGCCTGCTTCTGCTGAGCAAACCCCTATGGTTTTCGACTCCCAAGTCATTCAGTACCAATCCAACATCCCTTCCCAGTTCATATGGCCGGACCACGAAAAGCCGAGCCCCGACCGACCAGACCTTCTCGCTCCGGCCATCGACCTCAACGGCTTCCTCAGCGGCGATCCTGACATCGTCGCGAACTCGATTCGTTCGGTCGACGAGGCCTGCAAGAAGCATGGATTCTTCCTCATTGTGAACCACGGAGTTGATCCGGAGCTCATTGCAAAAGCTCACGGGTACATGGACGTGTTCTTTGAGATGAAGCTCTCGGAGAAGCAAAGGGCTCAGAGGAAGGTTGGTGAGAGCTACGGTTATACTAGTAGCTTCACCGGCAGGTTTAACTCCAAACTTCCATGGAAAGAAACACTTTCTTTCAGGTACTCTGCTGAGAGCCAGAGCTCTACAGTCGTTAAGGACTACTTTGTGAATGTGTTGGGTGAAGATTTTAGAGAAATCGGGAAGTTCTACCAAGAATACTCGGAAGTGATGAACAAACTATCCAATGGGATACTGGAGCTACTGGGACTGAGCCTGGGAGTTGCGCGGGAGTACTTCAAAGAGTTCTACGATGGAAACGATTCGATCATGAGGTTGAACTACTATCCAATGTGCCAAAAACCAGATCTGACACTGGGAACTGGGCCTCACTGTGATCCCACTTCCTTGACAATCCTTCATCAGGATCAAGTAGGGGGACTTGAAGTGTTTTTGGATGAGAAGTGGCACACCGTTACTCCTGTCCTTGGTTCTTTCGTTGTCAACATTGGTGATACTTTCATGGCTCTGTGCAATGGTATTTACAAGAGCTGCTTGCACAGGGCTGTGGTAAACAACAGAACTGTAAGGAAATCTCTTGCTTTCTTTCTCAATCCAAACAAGGACAGAGTAGTGACTCCACCAGCAAGTTTGATCAGTGCTGATAACCCGAGATTGTACCCGGACTTTACTTGGCCTACTCTGCTAGAGTTTACCCAGAAACACTACAGGGCTGACATGAGCACCATTGATGCTTTCTCGGACTGGATTAATGAGCAGAAAGGTGGAGAGGAAAAGAAAGAACAAGGAAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009653 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009791 GO:0009826 GO:0009908 GO:0009987 GO:0010033 GO:0010228 GO:0010476 GO:0010817 GO:0016043 GO:0016049 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016491 GO:0016705 GO:0016706 GO:0019752 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0032989 GO:0033993 GO:0040007 GO:0042221 GO:0042445 GO:0042446 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0045544 GO:0046394 GO:0048366 GO:0048367 GO:0048572 GO:0048573 GO:0048575 GO:0048589 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051213 GO:0051716 GO:0055114 GO:0060560 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:0071840 GO:0090567 GO:0099402 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

2OG-FeII_Oxy DIOX_N

Protein Analysis

376

Amino Acids

42.56

Weight (kDa)

5.35

Isoelectric Point (pI)

33.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DIOX_N	PF14226	50 - 154	2.5e-22	non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy	PF03171	213 - 311	5.2e-33	2OG-Fe(II) oxygenase superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000462)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25420 AT4G25420 AT5G51810 AT5G51810
fragaria_vesca	FvH4_7g12600 FvH4_7g12610 FvH4_7g12610 FvH4_7g28670
malus_domestica	MD00G1003600.v1.1 MD00G1123700.v1.1 MD01G1192100.v1.1 MD02G1198000.v1.1
prunus_persica	Prupe.2G150700_v2.0.a1 Prupe.2G286800_v2.0.a1
pyrus_communis	pycom02g16160
rosa_chinensis	RchiOBHm_Chr1g0351591 RchiOBHm_Chr1g0351601 RchiOBHm_Chr1g0351611 RchiOBHm_Chr1g0351621 RchiOBHm_Chr1g0351631 RchiOBHm_Chr1g0353771 RchiOBHm_Chr1g0353791 RchiOBHm_Chr1g0376161
rosa_laevigata	RLG00000026625 RLG00000028255 RLG00000028258 RLG00000028394 RLG00000028395 RLG00000028396 RLG00000028397 RLG00000028399
rosa_multiflora	Rmu_sc0001144.1_g000008 Rmu_sc0001144.1_g000010 Rmu_sc0001144.1_g000018 Rmu_sc0001144.1_g000029 Rmu_sc0002300.1_g000001 Rmu_sc0002300.1_g000013 Rmu_sc0005947.1_g000014 Rmu_sc0020670.1_g000001 Rmu_ssc0000116.1_g000048
rosa_roxburghii	Rroxscaffold_4G00282340 Rroxscaffold_4G00301610 Rroxscaffold_4G00301650 Rroxscaffold_4G00303660 Rroxscaffold_4G00303670 Rroxscaffold_4G00303690 Rroxscaffold_4G00303710
rosa_rugosa	Rorug01G0218900 Rorug01G0219000.1 Rorug01G0219100 Rorug01G0219300 Rorug01G0219400 Rorug01G0219500 Rorug01G0238200 Rorug01G0238400 Rorug01G0394200
rosa_samantha	Rh1AG233600 Rh1AG234000 Rh1AG234100 Rh1AG234200 Rh1AG250000 Rh1AG250100 Rh1AG405700 Rh1BG204300 Rh1BG204500 Rh1BG204700 Rh1BG204800 Rh1BG220300 Rh1BG220600 Rh1BG369400 Rh1CG218200 Rh1CG218600 Rh1CG218700 Rh1CG218800 Rh1CG232600 Rh1CG382100 Rh1DG231200 Rh1DG231500 Rh1DG231700 Rh1DG231800 Rh1DG247200 Rh1DG247500 Rh1DG399000
rosa_wichuraiana	Rw0G011370 Rw1G020360 Rw1G020370 Rw1G020380 Rw1G020390 Rw1G021810 Rw1G021830 Rw1G035990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	59
Acc36I	ACCTGC	1 cut(s)	384
AccB1I	GGYRCC	1 cut(s)	16
AccI	GTMKAC	1 cut(s)	216
AccII	CGCG	2 cut(s)	197, 604
AccIII	TCCGGA	1 cut(s)	271
AciI	CCGC	2 cut(s)	177, 604
AclWI	GGATC	4 cut(s)	176, 263, 707, 750
AcoI	YGGCCR	3 cut(s)	6, 101, 150
AfaI	GTAC	5 cut(s)	71, 299, 440, 611, 995
AfiI	CCNNNNNNNGG	2 cut(s)	739, 803
AflIII	ACRYGT	1 cut(s)	306
AgsI	TTSAA	3 cut(s)	616, 655, 761
AhlI	ACTAGT	1 cut(s)	377
AjiI	CACGTC	1 cut(s)	307
AjnI	CCWGG	1 cut(s)	591
AloI	GAACNNNNNNTCC	2 cut(s)	542, 574
AluBI	AGCT	8 cut(s)	277, 290, 325, 366, 384, 459, 577, 867
AluI	AGCT	8 cut(s)	277, 290, 325, 366, 384, 459, 577, 867
Alw21I	GWGCWC	3 cut(s)	279, 461, 1061
AlwI	GGATC	4 cut(s)	176, 263, 707, 750
Ama87I	CYCGRG	1 cut(s)	985
Aor13HI	TCCGGA	1 cut(s)	271
AoxI	GGCC	6 cut(s)	6, 101, 150, 222, 701, 1010
ApeKI	GCWGC	1 cut(s)	867
ArsI	GACNNNNNNTTYG	2 cut(s)	296, 328
AseI	ATTAAT	1 cut(s)	1086
Asp700I	GAANNNNTTC	1 cut(s)	637
AspLEI	GCGC	1 cut(s)	604
AspS9I	GGNCC	2 cut(s)	106, 701
AsuC2I	CCSGG	1 cut(s)	998
AsuHPI	GGTGA	4 cut(s)	371, 379, 509, 839
AvaI	CYCGRG	1 cut(s)	985
AvaII	GGWCC	1 cut(s)	106
BalI	TGGCCA	1 cut(s)	8
BanI	GGYRCC	1 cut(s)	16
BanII	GRGCYC	4 cut(s)	125, 279, 346, 461
Bbv12I	GWGCWC	3 cut(s)	279, 461, 1061
BbvCI	CCTCAGC	1 cut(s)	173
BbvI	GCAGC	1 cut(s)	854
BccI	CCATC	2 cut(s)	161, 623
BceAI	ACGGC	1 cut(s)	181
BciT130I	CCWGG	1 cut(s)	593
BciVI	GTATCC	1 cut(s)	561
BclI	TGATCA	1 cut(s)	969
BcnI	CCSGG	1 cut(s)	998
BcuI	ACTAGT	1 cut(s)	377
BfaI	CTAG	3 cut(s)	378, 1022, 1129
BfmI	CTRYAG	2 cut(s)	462, 1042
BfuAI	ACCTGC	1 cut(s)	384
BfuI	GTATCC	1 cut(s)	561
BglII	AGATCT	1 cut(s)	682
BisI	GCNGC	2 cut(s)	178, 868
BlpI	GCTNAGC	1 cut(s)	30
BlsI	GCNGC	2 cut(s)	179, 869
BmcAI	AGTACT	1 cut(s)	611
Bme1390I	CCNGG	2 cut(s)	593, 998
Bme18I	GGWCC	1 cut(s)	106
BmeT110I	CYCGRG	1 cut(s)	985
BmgBI	CACGTC	1 cut(s)	307
BmgT120I	GGNCC	2 cut(s)	106, 701
BmiI	GGNNCC	1 cut(s)	18
BmrFI	CCNGG	2 cut(s)	593, 998
BmrI	ACTGGG	4 cut(s)	85, 590, 701, 708
BmsI	GCATC	1 cut(s)	1057
BmuI	ACTGGG	4 cut(s)	85, 590, 701, 708
BpmI	CTGGAG	1 cut(s)	593
Bpu10I	CCTNAGC	1 cut(s)	173
Bpu1102I	GCTNAGC	1 cut(s)	30
BpuMI	CCSGG	1 cut(s)	998
BsaJI	CCNNGG	4 cut(s)	259, 413, 592, 802
BsaWI	WCCGGW	1 cut(s)	271
BsaXI	ACNNNNNCTCC	2 cut(s)	778, 808
Bsc4I	CCNNNNNNNGG	2 cut(s)	739, 803
Bse118I	RCCGGY	2 cut(s)	13, 389
Bse1I	ACTGG	6 cut(s)	91, 576, 585, 696, 703, 1085
Bse3DI	GCAATG	2 cut(s)	279, 856
BseAI	TCCGGA	1 cut(s)	271
BseBI	CCWGG	1 cut(s)	593
BseDI	CCNNGG	4 cut(s)	259, 413, 592, 802
BseGI	GGATG	2 cut(s)	81, 778
BseLI	CCNNNNNNNGG	2 cut(s)	739, 803
BseMI	GCAATG	2 cut(s)	279, 856
BseMII	CTCAG	5 cut(s)	21, 187, 359, 438, 578
BseNI	ACTGG	6 cut(s)	91, 576, 585, 696, 703, 1085
BseXI	GCAGC	1 cut(s)	854
Bsh1236I	CGCG	2 cut(s)	197, 604
Bsh1285I	CGRYCG	2 cut(s)	130, 216
BshFI	GGCC	6 cut(s)	8, 103, 152, 224, 703, 1012
BshNI	GGYRCC	1 cut(s)	16
BsiEI	CGRYCG	2 cut(s)	130, 216
BsiHKAI	GWGCWC	3 cut(s)	279, 461, 1061
BsiHKCI	CYCGRG	1 cut(s)	985
BsiSI	CCGG	6 cut(s)	14, 104, 149, 272, 390, 998
BslFI	GGGAC	2 cut(s)	597, 768
BslI	CCNNNNNNNGG	2 cut(s)	739, 803
BsmFI	GGGAC	2 cut(s)	597, 768
BsnI	GGCC	6 cut(s)	8, 103, 152, 224, 703, 1012
BsoBI	CYCGRG	1 cut(s)	985
Bsp1286I	GDGCHC	5 cut(s)	125, 279, 346, 461, 1061
Bsp13I	TCCGGA	1 cut(s)	271
Bsp143I	GATC	7 cut(s)	181, 268, 642, 682, 712, 742, 969
Bsp1720I	GCTNAGC	1 cut(s)	30
Bsp19I	CCATGG	1 cut(s)	413
Bsp68I	TCGCGA	1 cut(s)	197
BspACI	CCGC	2 cut(s)	177, 604
BspANI	GGCC	6 cut(s)	8, 103, 152, 224, 703, 1012
BspCNI	CTCAG	5 cut(s)	22, 186, 358, 439, 579
BspEI	TCCGGA	1 cut(s)	271
BspFNI	CGCG	2 cut(s)	197, 604
BspHI	TCATGA	1 cut(s)	645
BspLI	GGNNCC	1 cut(s)	18
BspMI	ACCTGC	1 cut(s)	384
BspPI	GGATC	4 cut(s)	176, 263, 707, 750
BspT107I	GGYRCC	1 cut(s)	16
BsrDI	GCAATG	2 cut(s)	279, 856
BsrFI	RCCGGY	2 cut(s)	13, 389
BsrI	ACTGG	6 cut(s)	91, 576, 585, 696, 703, 1085
BssAI	RCCGGY	2 cut(s)	13, 389
BssECI	CCNNGG	4 cut(s)	259, 413, 592, 802
BssMI	GATC	7 cut(s)	181, 268, 642, 682, 712, 742, 969
BssT1I	CCWWGG	2 cut(s)	413, 802
Bst2UI	CCWGG	1 cut(s)	593
Bst4CI	ACNGT	5 cut(s)	371, 466, 710, 790, 901
BstC8I	GCNNGC	3 cut(s)	21, 226, 872
BstDEI	CTNAG	5 cut(s)	30, 173, 345, 447, 587
BstDSI	CCRYGG	2 cut(s)	259, 413
BstENI	CCTNNNNNAGG	1 cut(s)	737
BstF5I	GGATG	2 cut(s)	81, 778
BstFNI	CGCG	2 cut(s)	197, 604
BstHHI	GCGC	1 cut(s)	604
BstKTI	GATC	7 cut(s)	184, 271, 645, 685, 715, 745, 972
BstMBI	GATC	7 cut(s)	181, 268, 642, 682, 712, 742, 969
BstMCI	CGRYCG	2 cut(s)	130, 216
BstMWI	GCNNNNNNNGC	3 cut(s)	174, 390, 1018
BstNI	CCWGG	1 cut(s)	593
BstSCI	CCNGG	2 cut(s)	591, 996
BstSFI	CTRYAG	2 cut(s)	462, 1042
BstUI	CGCG	2 cut(s)	197, 604
BstV1I	GCAGC	1 cut(s)	854
BstX2I	RGATCY	1 cut(s)	682
BstYI	RGATCY	1 cut(s)	682
BsuI	GTATCC	1 cut(s)	561
BsuRI	GGCC	6 cut(s)	8, 103, 152, 224, 703, 1012
BtgI	CCRYGG	2 cut(s)	259, 413
BtrI	CACGTC	1 cut(s)	307
BtsCI	GGATG	2 cut(s)	81, 778
BtsIMutI	CAGTG	3 cut(s)	689, 706, 979
BtuMI	TCGCGA	1 cut(s)	197
BveI	ACCTGC	1 cut(s)	384
Cac8I	GCNNGC	3 cut(s)	21, 226, 872
CciI	TCATGA	1 cut(s)	645
CfoI	GCGC	1 cut(s)	604
Cfr10I	RCCGGY	2 cut(s)	13, 389
Cfr13I	GGNCC	2 cut(s)	106, 701
Csp6I	GTAC	5 cut(s)	70, 298, 439, 610, 994
CviAII	CATG	7 cut(s)	10, 236, 301, 414, 646, 838, 1054
CviQI	GTAC	5 cut(s)	70, 298, 439, 610, 994
DdeI	CTNAG	5 cut(s)	30, 173, 345, 447, 587
DpnI	GATC	7 cut(s)	183, 270, 644, 684, 714, 744, 971
DpnII	GATC	7 cut(s)	181, 268, 642, 682, 712, 742, 969
DrdI	GACNNNNNNGTC	1 cut(s)	59
DseDI	GACNNNNNNGTC	1 cut(s)	59
EaeI	YGGCCR	3 cut(s)	6, 101, 150
Ecl136II	GAGCTC	2 cut(s)	277, 459
Eco130I	CCWWGG	2 cut(s)	413, 802
Eco147I	AGGCCT	1 cut(s)	224
Eco24I	GRGCYC	4 cut(s)	125, 279, 346, 461
Eco47I	GGWCC	1 cut(s)	106
Eco53kI	GAGCTC	2 cut(s)	277, 459
Eco88I	CYCGRG	1 cut(s)	985
EcoICRI	GAGCTC	2 cut(s)	277, 459
EcoNI	CCTNNNNNAGG	1 cut(s)	737
EcoRII	CCWGG	1 cut(s)	591
EcoT14I	CCWWGG	2 cut(s)	413, 802
EcoT38I	GRGCYC	4 cut(s)	125, 279, 346, 461
ErhI	CCWWGG	2 cut(s)	413, 802
FaeI	CATG	7 cut(s)	13, 239, 304, 417, 649, 841, 1057
FalI	AAGNNNNNCTT	6 cut(s)	411, 443, 464, 496, 854, 886
FaqI	GGGAC	2 cut(s)	597, 768
FatI	CATG	7 cut(s)	9, 235, 300, 413, 645, 837, 1053
FauI	CCCGC	1 cut(s)	597
FauNDI	CATATG	1 cut(s)	98
FbaI	TGATCA	1 cut(s)	969
FblI	GTMKAC	1 cut(s)	216
Fnu4HI	GCNGC	2 cut(s)	178, 868
FokI	GGATG	2 cut(s)	68, 785
FriOI	GRGCYC	4 cut(s)	125, 279, 346, 461
Fsp4HI	GCNGC	2 cut(s)	178, 868
FspBI	CTAG	3 cut(s)	378, 1022, 1129
GlaI	GCGC	1 cut(s)	603
GluI	GCNGC	2 cut(s)	178, 868
GsuI	CTGGAG	1 cut(s)	593
HaeIII	GGCC	6 cut(s)	8, 103, 152, 224, 703, 1012
HapII	CCGG	6 cut(s)	14, 104, 149, 272, 390, 998
HhaI	GCGC	1 cut(s)	604
Hin1II	CATG	7 cut(s)	13, 239, 304, 417, 649, 841, 1057
Hin6I	GCGC	1 cut(s)	602
HinP1I	GCGC	1 cut(s)	602
HincII	GTYRAC	2 cut(s)	217, 820
HindII	GTYRAC	2 cut(s)	217, 820
HinfI	GANTC	5 cut(s)	53, 205, 240, 638, 952
HpaII	CCGG	6 cut(s)	14, 104, 149, 272, 390, 998
HphI	GGTGA	4 cut(s)	371, 379, 509, 839
Hpy166II	GTNNAC	5 cut(s)	217, 256, 820, 889, 1029
Hpy188I	TCNGA	5 cut(s)	331, 348, 541, 687, 1078
Hpy188III	TCNNGA	6 cut(s)	185, 196, 272, 517, 646, 740
Hpy8I	GTNNAC	5 cut(s)	217, 256, 820, 889, 1029
Hpy99I	CGWCG	2 cut(s)	197, 221
HpyAV	CCTTC	4 cut(s)	96, 149, 346, 743
HpyCH4III	ACNGT	5 cut(s)	371, 466, 710, 790, 901
HpyCH4IV	ACGT	1 cut(s)	306
HpyCH4V	TGCA	4 cut(s)	228, 284, 849, 874
HpyF10VI	GCNNNNNNNGC	3 cut(s)	174, 390, 1018
HpyF3I	CTNAG	5 cut(s)	30, 173, 345, 447, 587
HpySE526I	ACGT	1 cut(s)	306
Hsp92II	CATG	7 cut(s)	13, 239, 304, 417, 649, 841, 1057
HspAI	GCGC	1 cut(s)	602
Kpn2I	TCCGGA	1 cut(s)	271
Ksp22I	TGATCA	1 cut(s)	969
Kzo9I	GATC	7 cut(s)	181, 268, 642, 682, 712, 742, 969
LmnI	GCTCC	3 cut(s)	151, 274, 574
Lsp1109I	GCAGC	1 cut(s)	854
LweI	GCATC	1 cut(s)	1057
MaeI	CTAG	3 cut(s)	378, 1022, 1129
MaeII	ACGT	1 cut(s)	306
MaeIII	GTNAC	2 cut(s)	790, 949
MalI	GATC	7 cut(s)	183, 270, 644, 684, 714, 744, 971
MboI	GATC	7 cut(s)	181, 268, 642, 682, 712, 742, 969
MboII	GAAGA	2 cut(s)	235, 512
MflI	RGATCY	1 cut(s)	682
MhlI	GDGCHC	5 cut(s)	125, 279, 346, 461, 1061
MlsI	TGGCCA	1 cut(s)	8
MluNI	TGGCCA	1 cut(s)	8
MlyI	GAGTC	2 cut(s)	47, 946
MmeI	TCCRAC	1 cut(s)	102
MnlI	CCTC	8 cut(s)	170, 182, 214, 257, 342, 642, 714, 1099
Mox20I	TGGCCA	1 cut(s)	8
MroI	TCCGGA	1 cut(s)	271
MroXI	GAANNNNTTC	1 cut(s)	637
MscI	TGGCCA	1 cut(s)	8
MseI	TTAA	3 cut(s)	399, 471, 1086
MslI	CAYNNNNRTG	2 cut(s)	14, 305
Msp20I	TGGCCA	1 cut(s)	8
MspA1I	CMGCKG	1 cut(s)	177
MspI	CCGG	6 cut(s)	14, 104, 149, 272, 390, 998
MspR9I	CCNGG	2 cut(s)	593, 998
MvaI	CCWGG	1 cut(s)	593
MvnI	CGCG	2 cut(s)	197, 604
MwoI	GCNNNNNNNGC	3 cut(s)	174, 390, 1018
NciI	CCSGG	1 cut(s)	998
NcoI	CCATGG	1 cut(s)	413
NdeI	CATATG	1 cut(s)	98
NdeII	GATC	7 cut(s)	181, 268, 642, 682, 712, 742, 969
NlaIII	CATG	7 cut(s)	13, 239, 304, 417, 649, 841, 1057
NlaIV	GGNNCC	1 cut(s)	18
NmeAIII	GCCGAG	1 cut(s)	144
NmuCI	GTSAC	1 cut(s)	949
NruI	TCGCGA	1 cut(s)	197
PagI	TCATGA	1 cut(s)	645
PceI	AGGCCT	1 cut(s)	224
PcsI	WCGNNNNNNNCGW	1 cut(s)	633
PdmI	GAANNNNTTC	1 cut(s)	637
PfeI	GAWTC	3 cut(s)	205, 240, 638
PflFI	GACNNNGTC	1 cut(s)	191
PkrI	GCNGC	2 cut(s)	179, 869
PleI	GAGTC	2 cut(s)	47, 946
PpsI	GAGTC	2 cut(s)	47, 946
PshBI	ATTAAT	1 cut(s)	1086
Psp124BI	GAGCTC	2 cut(s)	279, 461
Psp6I	CCWGG	1 cut(s)	591
PspGI	CCWGG	1 cut(s)	591
PspN4I	GGNNCC	1 cut(s)	18
PspPI	GGNCC	2 cut(s)	106, 701
PsuI	RGATCY	1 cut(s)	682
PsyI	GACNNNGTC	1 cut(s)	191
RruI	TCGCGA	1 cut(s)	197
RsaI	GTAC	5 cut(s)	71, 299, 440, 611, 995
RsaNI	GTAC	5 cut(s)	70, 298, 439, 610, 994
RseI	CAYNNNNRTG	2 cut(s)	14, 305
SacI	GAGCTC	2 cut(s)	279, 461
SalI	GTCGAC	1 cut(s)	215
SaqAI	TTAA	3 cut(s)	399, 471, 1086
SatI	GCNGC	2 cut(s)	178, 868
Sau3AI	GATC	7 cut(s)	181, 268, 642, 682, 712, 742, 969
Sau96I	GGNCC	2 cut(s)	106, 701
ScaI	AGTACT	1 cut(s)	611
SchI	GAGTC	2 cut(s)	47, 946
ScrFI	CCNGG	2 cut(s)	593, 998
SduI	GDGCHC	5 cut(s)	125, 279, 346, 461, 1061
SfaNI	GCATC	1 cut(s)	1057
SfcI	CTRYAG	2 cut(s)	462, 1042
SinI	GGWCC	1 cut(s)	106
SmiMI	CAYNNNNRTG	2 cut(s)	14, 305
SpeI	ACTAGT	1 cut(s)	377
SseBI	AGGCCT	1 cut(s)	224
SsiI	CCGC	2 cut(s)	177, 604
SspMI	CTAG	3 cut(s)	378, 1022, 1129
SstI	GAGCTC	2 cut(s)	279, 461
StuI	AGGCCT	1 cut(s)	224
StyD4I	CCNGG	2 cut(s)	591, 996
StyI	CCWWGG	2 cut(s)	413, 802
TaaI	ACNGT	5 cut(s)	371, 466, 710, 790, 901
TaiI	ACGT	1 cut(s)	309
TaqI	TCGA	5 cut(s)	51, 156, 203, 216, 641
TaqII	GACCGA	2 cut(s)	144, 202
TatI	WGTACW	1 cut(s)	609
TauI	GCSGC	1 cut(s)	180
TfiI	GAWTC	3 cut(s)	205, 240, 638
Tru1I	TTAA	3 cut(s)	399, 471, 1086
Tru9I	TTAA	3 cut(s)	399, 471, 1086
TscAI	CASTG	3 cut(s)	696, 713, 979
TseFI	GTSAC	1 cut(s)	949
TseI	GCWGC	1 cut(s)	867
Tsp45I	GTSAC	1 cut(s)	949
TspDTI	ATGAA	5 cut(s)	85, 335, 563, 725, 826
TspGWI	ACGGA	1 cut(s)	276
TspRI	CASTG	3 cut(s)	696, 713, 979
Tth111I	GACNNNGTC	1 cut(s)	191
VpaK11BI	GGWCC	1 cut(s)	106
VspI	ATTAAT	1 cut(s)	1086
XagI	CCTNNNNNAGG	1 cut(s)	737
XcmI	CCANNNNNNNNNTGG	1 cut(s)	568
XmiI	GTMKAC	1 cut(s)	216
XmnI	GAANNNNTTC	1 cut(s)	637
XspI	CTAG	3 cut(s)	378, 1022, 1129
ZrmI	AGTACT	1 cut(s)	611

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.