MD00G1003600.v1.1

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Reverse (-)
594808 .. 596586
1779 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1003600.v1.1.491

Sequence Viewer

Length: 1179 bp
ATGGCTGTTGAGTGCATGATCAAACCCAGCAGCTTGCAAACCATGACACAACCTCCCTCCCCAAAAACCCAGCAAACCCAGCAGCACAAAGAGGATGACCAAAAGCCATTGGTTTTTGATGCCTCAGTTTTCAGGTATCAAACTGAAATTCCGAGTCAGTTCATCTGGCCCGATCACGAAAAGCCTTGCAAAAACACTCCCGAGCTCCAAGTCGCACTCATAGACTTGGGAGGCTTTCTCTCCGGTGACAAAGAAGCCGTCGCGAAAGCCTCTCAACTTGTAGGAGAGGCATGCCAGAAGCATGGATTTTTCCTCATCGTGAATCATGGCGTCGACAATAAGCTCATCGCGGACGCTCACTGCTACATGGATGACTTTTTTGGAATGCCACTCTCCGAGAAACAGAGAGCTGAAAGGAAAGCAGGGGAGAGCTGTGGCTATGCCAGCAGCTTCACTGGCAGATTCTCCTCAAAACTCCCGTGGAAAGAGACTCTTTCTTTCAGCTACTCCGCCGAAAAAGGCTCAACAAATTTTATCCAAGATTATTTTTGCGACAAAATGGGGGAAGAATTCAAGGAATTCGGGAGGGTTTACCAAGATTATTGCAAGGCTATGAGCACACTTTCTATTGGGATCATGGAACTTCTGGGACTGAGCCTTGGAGTGGACAGAGCTTACTTCAAGGAGTTTTTCGAAGACAACAATTCGATAATGAGGCTTAACTACTACCCACCATGCCAGAGACCTGAGCAGACTTTAGGCACTGGCCCTCATTGTGATCCAACTTCTTTGACCATTCTTCACGAAGACCAAGTTGGAGGCCTTGAAGTCTTTGTTGATGATCAATGGCACTCCGTTACCCCTAATTTAAATGCCTTTGTCGTCAACATTGGTGACACCTTCATGGCACTTTCAAATGGGAAGTACAAAAGCGGGCTGCACAGGGCGGTGGTGAATAGTGAAACACCAAGGAAGTCTCTTGCATTCTTCTTGTGTCCGAGAGACGATAAAGTTGTGAAGCCACCGAGCGGGTTGGTGGATACTTCGAGTCCGAGAAAATACCCAGATTTCACATGGTCGATGCTGTTGGAGTTCACAATGAAGCATTACAGAGCCGACATGAAAACCCTGCAGGTCTTTTCAAACTGGGTTCAACAGAAAAGCAACCAAAAACTGTGA

Protein Analysis

393

Amino Acids

44.42

Weight (kDa)

5.96

Isoelectric Point (pI)

32.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DIOX_N PF14226 73 - 174 5.9e-23 non-haem dioxygenase in morphine synthesis N-terminal
2OG-FeII_Oxy PF03171 235 - 333 1.8e-34 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000462)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G25420 AT4G25420 AT5G51810 AT5G51810
fragaria_vesca FvH4_7g12600 FvH4_7g12610 FvH4_7g12610 FvH4_7g28670
malus_domestica MD00G1003600.v1.1 MD00G1123700.v1.1 MD01G1192100.v1.1 MD02G1198000.v1.1
prunus_persica Prupe.2G150700_v2.0.a1 Prupe.2G286800_v2.0.a1
pyrus_communis pycom02g16160
rosa_chinensis RchiOBHm_Chr1g0351591 RchiOBHm_Chr1g0351601 RchiOBHm_Chr1g0351611 RchiOBHm_Chr1g0351621 RchiOBHm_Chr1g0351631 RchiOBHm_Chr1g0353771 RchiOBHm_Chr1g0353791 RchiOBHm_Chr1g0376161
rosa_laevigata RLG00000026625 RLG00000028255 RLG00000028258 RLG00000028394 RLG00000028395 RLG00000028396 RLG00000028397 RLG00000028399
rosa_multiflora Rmu_sc0001144.1_g000008 Rmu_sc0001144.1_g000010 Rmu_sc0001144.1_g000018 Rmu_sc0001144.1_g000029 Rmu_sc0002300.1_g000001 Rmu_sc0002300.1_g000013 Rmu_sc0005947.1_g000014 Rmu_sc0020670.1_g000001 Rmu_ssc0000116.1_g000048
rosa_roxburghii Rroxscaffold_4G00282340 Rroxscaffold_4G00301610 Rroxscaffold_4G00301650 Rroxscaffold_4G00303660 Rroxscaffold_4G00303670 Rroxscaffold_4G00303690 Rroxscaffold_4G00303710
rosa_rugosa Rorug01G0218900 Rorug01G0219000.1 Rorug01G0219100 Rorug01G0219300 Rorug01G0219400 Rorug01G0219500 Rorug01G0238200 Rorug01G0238400 Rorug01G0394200
rosa_samantha Rh1AG233600 Rh1AG234000 Rh1AG234100 Rh1AG234200 Rh1AG250000 Rh1AG250100 Rh1AG405700 Rh1BG204300 Rh1BG204500 Rh1BG204700 Rh1BG204800 Rh1BG220300 Rh1BG220600 Rh1BG369400 Rh1CG218200 Rh1CG218600 Rh1CG218700 Rh1CG218800 Rh1CG232600 Rh1CG382100 Rh1DG231200 Rh1DG231500 Rh1DG231700 Rh1DG231800 Rh1DG247200 Rh1DG247500 Rh1DG399000
rosa_wichuraiana Rw0G011370 Rw1G020360 Rw1G020370 Rw1G020380 Rw1G020390 Rw1G021810 Rw1G021830 Rw1G035990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1123
AccBSI CCGCTC 1 cut(s) 1029
AccI GTMKAC 1 cut(s) 333
AccII CGCG 2 cut(s) 263, 350
AciI CCGC 5 cut(s) 350, 510, 933, 947, 1029
AclWI GGATC 2 cut(s) 641, 773
AcsI RAATTY 4 cut(s) 147, 529, 569, 578
AcyI GRCGYC 1 cut(s) 330
AfaI GTAC 1 cut(s) 926
AfiI CCNNNNNNNGG 2 cut(s) 664, 1028
AgsI TTSAA 6 cut(s) 574, 682, 827, 915, 1143, 1154
AjuI GAANNNNNNNTTGG 2 cut(s) 798, 830
AluBI AGCT 8 cut(s) 33, 205, 343, 410, 432, 450, 504, 674
AluI AGCT 8 cut(s) 33, 205, 343, 410, 432, 450, 504, 674
Alw21I GWGCWC 2 cut(s) 207, 620
Alw26I GTCTC 4 cut(s) 482, 736, 981, 996
AlwI GGATC 2 cut(s) 641, 773
Ama87I CYCGRG 1 cut(s) 200
AoxI GGCC 3 cut(s) 167, 766, 820
ApeKI GCWGC 4 cut(s) 30, 82, 447, 937
ApoI RAATTY 4 cut(s) 147, 529, 569, 578
ArsI GACNNNNNNTTYG 2 cut(s) 243, 275
AspS9I GGNCC 2 cut(s) 168, 767
AsuHPI GGTGA 3 cut(s) 257, 905, 964
AsuII TTCGAA 1 cut(s) 693
AvaI CYCGRG 1 cut(s) 200
BanII GRGCYC 1 cut(s) 207
BbsI GAAGAC 2 cut(s) 702, 813
Bbv12I GWGCWC 2 cut(s) 207, 620
BbvI GCAGC 4 cut(s) 42, 94, 459, 924
BceAI ACGGC 1 cut(s) 242
BciVI GTATCC 1 cut(s) 1033
BclI TGATCA 2 cut(s) 18, 841
BcoDI GTCTC 4 cut(s) 482, 736, 981, 996
BfmI CTRYAG 1 cut(s) 1130
BfuAI ACCTGC 1 cut(s) 1123
BfuI GTATCC 1 cut(s) 1033
BisI GCNGC 4 cut(s) 31, 83, 448, 938
BlsI GCNGC 4 cut(s) 32, 84, 449, 939
BmeT110I CYCGRG 1 cut(s) 200
BmgT120I GGNCC 2 cut(s) 168, 767
BmrI ACTGGG 1 cut(s) 1156
BmsI GCATC 2 cut(s) 109, 1071
BmuI ACTGGG 1 cut(s) 1156
BpiI GAAGAC 2 cut(s) 702, 813
BplI GAGNNNNNCTC 2 cut(s) 222, 254
Bpu10I CCTNAGC 1 cut(s) 747
Bpu14I TTCGAA 1 cut(s) 693
BsaHI GRCGYC 1 cut(s) 330
BsaI GGTCTC 1 cut(s) 736
BsaJI CCNNGG 3 cut(s) 479, 658, 968
BsaWI WCCGGW 1 cut(s) 242
BsaXI ACNNNNNCTCC 2 cut(s) 37, 67
Bsc4I CCNNNNNNNGG 2 cut(s) 664, 1028
Bse1I ACTGG 3 cut(s) 460, 769, 1151
BseDI CCNNGG 3 cut(s) 479, 658, 968
BseGI GGATG 2 cut(s) 100, 376
BseLI CCNNNNNNNGG 2 cut(s) 664, 1028
BseMII CTCAG 3 cut(s) 138, 644, 738
BseNI ACTGG 3 cut(s) 460, 769, 1151
BseRI GAGGAG 1 cut(s) 457
BseXI GCAGC 4 cut(s) 42, 94, 459, 924
BseYI CCCAGC 3 cut(s) 26, 69, 78
BsgI GTGCAG 1 cut(s) 923
Bsh1236I CGCG 2 cut(s) 263, 350
BshFI GGCC 3 cut(s) 169, 768, 822
BsiHKAI GWGCWC 2 cut(s) 207, 620
BsiHKCI CYCGRG 1 cut(s) 200
BsiSI CCGG 1 cut(s) 243
BslFI GGGAC 1 cut(s) 663
BslI CCNNNNNNNGG 2 cut(s) 664, 1028
BsmAI GTCTC 4 cut(s) 482, 736, 981, 996
BsmBI CGTCTC 1 cut(s) 996
BsmFI GGGAC 1 cut(s) 663
BsmI GAATGC 2 cut(s) 390, 983
BsnI GGCC 3 cut(s) 169, 768, 822
Bso31I GGTCTC 1 cut(s) 736
BsoBI CYCGRG 1 cut(s) 200
Bsp119I TTCGAA 1 cut(s) 693
Bsp1286I GDGCHC 2 cut(s) 207, 620
Bsp143I GATC 5 cut(s) 18, 172, 633, 778, 841
Bsp68I TCGCGA 1 cut(s) 263
BspACI CCGC 5 cut(s) 350, 510, 933, 947, 1029
BspANI GGCC 3 cut(s) 169, 768, 822
BspCNI CTCAG 3 cut(s) 137, 645, 739
BspFNI CGCG 2 cut(s) 263, 350
BspMAI CTGCAG 1 cut(s) 1134
BspMI ACCTGC 1 cut(s) 1123
BspPI GGATC 2 cut(s) 641, 773
BspT104I TTCGAA 1 cut(s) 693
BspTNI GGTCTC 1 cut(s) 736
BsrBI CCGCTC 1 cut(s) 1029
BsrI ACTGG 3 cut(s) 460, 769, 1151
BssECI CCNNGG 3 cut(s) 479, 658, 968
BssMI GATC 5 cut(s) 18, 172, 633, 778, 841
BssNI GRCGYC 1 cut(s) 330
BssT1I CCWWGG 2 cut(s) 658, 968
Bst4CI ACNGT 1 cut(s) 1176
BstACI GRCGYC 1 cut(s) 330
BstBI TTCGAA 1 cut(s) 693
BstC8I GCNNGC 4 cut(s) 35, 292, 445, 935
BstDEI CTNAG 3 cut(s) 124, 653, 747
BstDSI CCRYGG 1 cut(s) 479
BstF5I GGATG 2 cut(s) 100, 376
BstFNI CGCG 2 cut(s) 263, 350
BstKTI GATC 5 cut(s) 21, 175, 636, 781, 844
BstMAI GTCTC 4 cut(s) 482, 736, 981, 996
BstMBI GATC 5 cut(s) 18, 172, 633, 778, 841
BstMWI GCNNNNNNNGC 3 cut(s) 79, 444, 456
BstNSI RCATGY 1 cut(s) 294
BstSFI CTRYAG 1 cut(s) 1130
BstUI CGCG 2 cut(s) 263, 350
BstV1I GCAGC 4 cut(s) 42, 94, 459, 924
BstV2I GAAGAC 2 cut(s) 702, 813
BstXI CCANNNNNNTGG 1 cut(s) 302
BsuI GTATCC 1 cut(s) 1033
BsuRI GGCC 3 cut(s) 169, 768, 822
BtgI CCRYGG 1 cut(s) 479
BtgZI GCGATG 1 cut(s) 331
BtsCI GGATG 2 cut(s) 100, 376
BtsI GCAGTG 1 cut(s) 358
BtsIMutI CAGTG 3 cut(s) 358, 453, 762
BtuMI TCGCGA 1 cut(s) 263
BveI ACCTGC 1 cut(s) 1123
Cac8I GCNNGC 4 cut(s) 35, 292, 445, 935
Cfr13I GGNCC 2 cut(s) 168, 767
CseI GACGC 2 cut(s) 319, 362
Csp6I GTAC 1 cut(s) 925
CviQI GTAC 1 cut(s) 925
DdeI CTNAG 3 cut(s) 124, 653, 747
DpnI GATC 5 cut(s) 20, 174, 635, 780, 843
DpnII GATC 5 cut(s) 18, 172, 633, 778, 841
DraI TTTAAA 1 cut(s) 870
EciI GGCGGA 1 cut(s) 499
Ecl136II GAGCTC 1 cut(s) 205
Eco130I CCWWGG 2 cut(s) 658, 968
Eco147I AGGCCT 1 cut(s) 822
Eco24I GRGCYC 1 cut(s) 207
Eco31I GGTCTC 1 cut(s) 736
Eco53kI GAGCTC 1 cut(s) 205
Eco88I CYCGRG 1 cut(s) 200
EcoICRI GAGCTC 1 cut(s) 205
EcoRI GAATTC 2 cut(s) 569, 578
EcoT14I CCWWGG 2 cut(s) 658, 968
EcoT38I GRGCYC 1 cut(s) 207
ErhI CCWWGG 2 cut(s) 658, 968
Esp3I CGTCTC 1 cut(s) 996
FalI AAGNNNNNCTT 2 cut(s) 477, 509
FaqI GGGAC 1 cut(s) 663
FauI CCCGC 2 cut(s) 926, 1022
FbaI TGATCA 2 cut(s) 18, 841
FblI GTMKAC 1 cut(s) 333
Fnu4HI GCNGC 4 cut(s) 31, 83, 448, 938
FokI GGATG 2 cut(s) 107, 383
FriOI GRGCYC 1 cut(s) 207
Fsp4HI GCNGC 4 cut(s) 31, 83, 448, 938
GluI GCNGC 4 cut(s) 31, 83, 448, 938
GsaI CCCAGC 3 cut(s) 30, 73, 82
HaeIII GGCC 3 cut(s) 169, 768, 822
HapII CCGG 1 cut(s) 243
HgaI GACGC 2 cut(s) 319, 362
Hin1I GRCGYC 1 cut(s) 330
HincII GTYRAC 2 cut(s) 334, 886
HindII GTYRAC 2 cut(s) 334, 886
HinfI GANTC 5 cut(s) 154, 322, 462, 490, 1048
HpaII CCGG 1 cut(s) 243
HphI GGTGA 3 cut(s) 257, 905, 964
Hpy166II GTNNAC 5 cut(s) 334, 592, 667, 886, 1095
Hpy188I TCNGA 4 cut(s) 153, 397, 999, 1053
Hpy188III TCNNGA 6 cut(s) 176, 200, 262, 319, 583, 803
Hpy8I GTNNAC 5 cut(s) 334, 592, 667, 886, 1095
Hpy99I CGWCG 2 cut(s) 263, 335
HpyAV CCTTC 1 cut(s) 910
HpyCH4III ACNGT 1 cut(s) 1176
HpyCH4V TGCA 7 cut(s) 15, 37, 189, 606, 940, 983, 1132
HpyF10VI GCNNNNNNNGC 3 cut(s) 79, 444, 456
HpyF3I CTNAG 3 cut(s) 124, 653, 747
Hsp92I GRCGYC 1 cut(s) 330
Ksp22I TGATCA 2 cut(s) 18, 841
Kzo9I GATC 5 cut(s) 18, 172, 633, 778, 841
LmnI GCTCC 1 cut(s) 210
Lsp1109I GCAGC 4 cut(s) 42, 94, 459, 924
LweI GCATC 2 cut(s) 109, 1071
MaeIII GTNAC 3 cut(s) 245, 856, 893
MalI GATC 5 cut(s) 20, 174, 635, 780, 843
MbiI CCGCTC 1 cut(s) 1029
MboI GATC 5 cut(s) 18, 172, 633, 778, 841
MboII GAAGA 5 cut(s) 578, 707, 791, 818, 979
MhlI GDGCHC 2 cut(s) 207, 620
MluCI AATT 6 cut(s) 147, 529, 569, 578, 703, 865
MlyI GAGTC 3 cut(s) 163, 484, 1057
MmeI TCCRAC 3 cut(s) 796, 806, 1068
MseI TTAA 2 cut(s) 720, 869
MslI CAYNNNNRTG 1 cut(s) 902
MspI CCGG 1 cut(s) 243
Mva1269I GAATGC 2 cut(s) 390, 983
MvnI CGCG 2 cut(s) 263, 350
MwoI GCNNNNNNNGC 3 cut(s) 79, 444, 456
NdeII GATC 5 cut(s) 18, 172, 633, 778, 841
NmuCI GTSAC 2 cut(s) 245, 893
NruI TCGCGA 1 cut(s) 263
NspI RCATGY 1 cut(s) 294
NspV TTCGAA 1 cut(s) 693
PaeI GCATGC 1 cut(s) 294
PceI AGGCCT 1 cut(s) 822
PctI GAATGC 2 cut(s) 390, 983
PfeI GAWTC 2 cut(s) 322, 462
PkrI GCNGC 4 cut(s) 32, 84, 449, 939
PleI GAGTC 3 cut(s) 162, 484, 1056
PpsI GAGTC 3 cut(s) 162, 484, 1056
Psp124BI GAGCTC 1 cut(s) 207
PspFI CCCAGC 3 cut(s) 26, 69, 78
PspPI GGNCC 2 cut(s) 168, 767
PstI CTGCAG 1 cut(s) 1134
RruI TCGCGA 1 cut(s) 263
RsaI GTAC 1 cut(s) 926
RsaNI GTAC 1 cut(s) 925
RseI CAYNNNNRTG 1 cut(s) 902
SacI GAGCTC 1 cut(s) 207
SalI GTCGAC 1 cut(s) 332
SaqAI TTAA 2 cut(s) 720, 869
SatI GCNGC 4 cut(s) 31, 83, 448, 938
Sau3AI GATC 5 cut(s) 18, 172, 633, 778, 841
Sau96I GGNCC 2 cut(s) 168, 767
SbfI CCTGCAGG 1 cut(s) 1134
SchI GAGTC 3 cut(s) 163, 484, 1057
SdaI CCTGCAGG 1 cut(s) 1134
SduI GDGCHC 2 cut(s) 207, 620
SfaNI GCATC 2 cut(s) 109, 1071
SfcI CTRYAG 1 cut(s) 1130
SfuI TTCGAA 1 cut(s) 693
SmiI ATTTAAAT 1 cut(s) 870
SmiMI CAYNNNNRTG 1 cut(s) 902
SphI GCATGC 1 cut(s) 294
Sse8387I CCTGCAGG 1 cut(s) 1134
Sse9I AATT 6 cut(s) 147, 529, 569, 578, 703, 865
SseBI AGGCCT 1 cut(s) 822
SsiI CCGC 5 cut(s) 350, 510, 933, 947, 1029
SstI GAGCTC 1 cut(s) 207
StuI AGGCCT 1 cut(s) 822
StyI CCWWGG 2 cut(s) 658, 968
SwaI ATTTAAAT 1 cut(s) 870
TaaI ACNGT 1 cut(s) 1176
TaqI TCGA 5 cut(s) 333, 693, 707, 1046, 1079
TasI AATT 6 cut(s) 147, 529, 569, 578, 703, 865
TatI WGTACW 1 cut(s) 924
TfiI GAWTC 2 cut(s) 322, 462
Tru1I TTAA 2 cut(s) 720, 869
Tru9I TTAA 2 cut(s) 720, 869
TscAI CASTG 3 cut(s) 365, 460, 769
TseFI GTSAC 2 cut(s) 245, 893
TseI GCWGC 4 cut(s) 30, 82, 447, 937
Tsp45I GTSAC 2 cut(s) 245, 893
TspDTI ATGAA 4 cut(s) 151, 892, 1115, 1136
TspGWI ACGGA 1 cut(s) 844
TspRI CASTG 3 cut(s) 365, 460, 769
XapI RAATTY 4 cut(s) 147, 529, 569, 578
XceI RCATGY 1 cut(s) 294
XcmI CCANNNNNNNNNTGG 1 cut(s) 1071
XmiI GTMKAC 1 cut(s) 333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.