MD01G1033200.v1.1

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
11539205 .. 11543068
3864 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1033200.v1.1.491

Sequence Viewer

Length: 1710 bp
ATGATGAGTTCAGTAGACCAAGCAACCAAAAAAGGGCATGCAGTTTTTGTCCCATACCCAGCACAAGGCCATGTTAACCCCATGATGCAGTTAGCCAAGCTTCGTCACTCAAGGGGCTTCCACATAACCTTTGTCAACACCGAGTTCAACCACAACCGTTTAATCCGGTCAAAAGGTCCCGACCCCGTTAAGGGTCTACTGGTCTTTGTGTTCGTCGCAGGAATCTCCTGGCGGACGAGCACACAGCTCCCCTGGGAGAATGGCACGACTTCAACTTGGGTTCCTGTAGCAATAGAGGTTGCCCGAATGCGGTTTGGTAAGCAGGTGGCCTTTGTAACTTGTGCCCAGCCGAAAGCCTCTTTCCTGCCTCCTAAGTTTTCCTCTGGGCCTTGGGTTTGGGCCGGCCTTCTCTCTGGCCCAAAGTTCAGATTTTATCCCAAACACTTTGTGTTCGAGACGAAACCAAACGGGTTGCCTCCTTTGGATAAGGATGGAACCCAAGATATTCCAGCTTTATATGACTTCATTAAGAAAACTTGTTTTGGTCCATTTAAAGAGCAGGTGGCTAAGATCAATTCCTCATCTCAAGTGCCACAAGTTACTTGCATAGTTGCAGATGGTATCATTACCTTTGGGTGCAAAACTGCTACAGAATTAGGCATTCCGGAGGTTGTGTTATGGACAGCCTCTGCTTGTGGCTTCATGGGGTACTTGCAACACAGCGAACTCGTCAAACGTGGCATGATTCCGTTCAAAGGCATGAAAAATGTTCGACTCAAAGACATCCCAAATTTCATTAGAGTTACTAATCTCAGCGACATGATGTTTAATTACTTGGGATCCGAAGCACGGAACTTTTTGAACTCTTCTTCAATCCTCTTCAACACATTTGACGAATTTGAACACATGTTCCCCAACATTTACACCATTGGCCCCTTTAATTTGCTGGGCAGGCATTTCCCCGAAAGCAAGTCACTTAACTCAAGCTTATGGAAAGAAGACACAAAATGTTCGGAATGGCTTGATAAAAAGAAACCCAATTCGGTTGTGTACGTAAATTATGGTAGCATAACGATGATGACAGACCAACATTTGATCGAGTTTGCATGGGGGCTGGCAAATAGCAAGCACCCATTTTTATGGATAGTTAGGGTTGACGTGGTAAAGGGTGACTCACCAATTTTACCCGATGAATTTTTTGAGGAGATTAAGGATAGGGGTTATATTACAGGTTTGTGTGCACAGGACCAAGTGTTAGCTCATCCATCTGTTGGGGTTTTCCTTACACACAGTGGTTGGAATTCTACCATTGAAAATATATCTCACGGCGTGCCCTTAATTTGCTGGCCTTTCTTTGTGGAGCAACAAATGAATTGTCGATACTCATGCACAATGTGGGAGATTGGAATGGAGGTGAGCCCCAACGTGAAGCGCGACGAAATTGAAGCACTGGTTAAGGAAATGATGGAAGGAGAAGGAGGGATGAAGATGAGAGAAAAGGCAAAGGAATGGAAGAAAAAAGTTGTTGATCTGAAATTTCAGGTAGATGGACCATGGGCCCACTCCAATAACACCGATACTGTCCCCATTTGGCCACTTGCTCAATCCGTCAGGTTTGAAGCTACTGATGTTGGAGGATCATCGTACAATAATTTTGAGAGATTGTTTAAGGAGGCACTCCAACTTGGTAAACAAATTGCTACAGAATGA

Protein Analysis

570

Amino Acids

64.37

Weight (kDa)

8.51

Isoelectric Point (pI)

34.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 15 - 57 6.4e-06 Glycosyltransferase, N-terminal domain
UDPGT PF00201 339 - 491 5.3e-20 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 313, 550
Acc36I ACCTGC 2 cut(s) 313, 550
AccB7I CCANNNNNTGG 1 cut(s) 1271
AccI GTMKAC 2 cut(s) 15, 196
AccII CGCG 1 cut(s) 1434
AccIII TCCGGA 1 cut(s) 664
AciI CCGC 2 cut(s) 232, 310
AclWI GGATC 3 cut(s) 834, 847, 1645
AcoI YGGCCR 1 cut(s) 1592
AcsI RAATTY 5 cut(s) 790, 896, 1193, 1300, 1535
AdeI CACNNNGTG 4 cut(s) 448, 1292, 1330, 1395
AfaI GTAC 3 cut(s) 710, 1052, 1646
AfiI CCNNNNNNNGG 8 cut(s) 33, 65, 190, 191, 309, 755, 849, 1271
AflIII ACRYGT 1 cut(s) 906
AjiI CACGTC 1 cut(s) 1159
AjnI CCWGG 2 cut(s) 227, 251
AloI GAACNNNNNNTCC 2 cut(s) 894, 926
AluBI AGCT 6 cut(s) 100, 247, 512, 987, 1259, 1622
AluI AGCT 6 cut(s) 100, 247, 512, 987, 1259, 1622
Alw21I GWGCWC 2 cut(s) 242, 1243
Alw26I GTCTC 1 cut(s) 449
Alw44I GTGCAC 1 cut(s) 1239
AlwI GGATC 3 cut(s) 834, 847, 1645
AlwNI CAGNNNCTG 1 cut(s) 689
Aor13HI TCCGGA 1 cut(s) 664
ApaI GGGCCC 1 cut(s) 1561
ApaLI GTGCAC 1 cut(s) 1239
ApoI RAATTY 5 cut(s) 790, 896, 1193, 1300, 1535
ArsI GACNNNNNNTTYG 2 cut(s) 1360, 1392
AspLEI GCGC 1 cut(s) 1434
AsuHPI GGTGA 3 cut(s) 1167, 1181, 1426
AvaII GGWCC 4 cut(s) 176, 545, 1246, 1550
BaeGI GKGCMC 4 cut(s) 346, 1243, 1335, 1561
BalI TGGCCA 1 cut(s) 1594
BamHI GGATCC 1 cut(s) 839
BanII GRGCYC 2 cut(s) 1421, 1561
BbsI GAAGAC 1 cut(s) 1005
Bbv12I GWGCWC 2 cut(s) 242, 1243
BccI CCATC 5 cut(s) 485, 611, 1273, 1459, 1541
BceAI ACGGC 1 cut(s) 1342
BcgI CGANNNNNNTGC 2 cut(s) 1368, 1402
BciT130I CCWGG 2 cut(s) 229, 253
BcoDI GTCTC 1 cut(s) 449
BfmI CTRYAG 3 cut(s) 285, 648, 1701
BfuAI ACCTGC 2 cut(s) 313, 550
Bme1390I CCNGG 2 cut(s) 229, 253
Bme18I GGWCC 4 cut(s) 176, 545, 1246, 1550
BmgBI CACGTC 1 cut(s) 1159
BmiI GGNNCC 6 cut(s) 178, 282, 496, 841, 934, 1559
BmrFI CCNGG 2 cut(s) 229, 253
BmsI GCATC 1 cut(s) 75
BpiI GAAGAC 1 cut(s) 1005
BpuEI CTTGAG 3 cut(s) 94, 570, 967
BsaAI YACGTR 1 cut(s) 1054
BsaJI CCNNGG 4 cut(s) 251, 252, 389, 1553
BsaWI WCCGGW 2 cut(s) 165, 664
BsaXI ACNNNNNCTCC 2 cut(s) 659, 689
Bsc4I CCNNNNNNNGG 8 cut(s) 33, 65, 190, 191, 309, 755, 849, 1271
Bse118I RCCGGY 1 cut(s) 401
Bse1I ACTGG 2 cut(s) 204, 1455
BseAI TCCGGA 1 cut(s) 664
BseBI CCWGG 2 cut(s) 229, 253
BseDI CCNNGG 4 cut(s) 251, 252, 389, 1553
BseGI GGATG 4 cut(s) 496, 783, 1261, 1488
BseLI CCNNNNNNNGG 8 cut(s) 33, 65, 190, 191, 309, 755, 849, 1271
BseMII CTCAG 1 cut(s) 826
BseNI ACTGG 2 cut(s) 204, 1455
BseRI GAGGAG 1 cut(s) 1217
BseSI GKGCMC 4 cut(s) 346, 1243, 1335, 1561
BseYI CCCAGC 3 cut(s) 58, 345, 946
Bsh1236I CGCG 1 cut(s) 1434
BsiHKAI GWGCWC 2 cut(s) 242, 1243
BsiSI CCGG 3 cut(s) 166, 402, 665
BslFI GGGAC 3 cut(s) 35, 162, 1568
BslI CCNNNNNNNGG 8 cut(s) 33, 65, 190, 191, 309, 755, 849, 1271
BsmAI GTCTC 1 cut(s) 449
BsmBI CGTCTC 1 cut(s) 449
BsmFI GGGAC 3 cut(s) 35, 162, 1568
BsmI GAATGC 2 cut(s) 312, 660
Bsp120I GGGCCC 1 cut(s) 1557
Bsp1286I GDGCHC 6 cut(s) 242, 346, 1243, 1335, 1421, 1561
Bsp13I TCCGGA 1 cut(s) 664
Bsp143I GATC 5 cut(s) 570, 839, 1095, 1528, 1637
Bsp19I CCATGG 1 cut(s) 1553
BspACI CCGC 2 cut(s) 232, 310
BspCNI CTCAG 1 cut(s) 825
BspEI TCCGGA 1 cut(s) 664
BspFNI CGCG 1 cut(s) 1434
BspLI GGNNCC 6 cut(s) 178, 282, 496, 841, 934, 1559
BspMI ACCTGC 2 cut(s) 313, 550
BspPI GGATC 3 cut(s) 834, 847, 1645
BsrFI RCCGGY 1 cut(s) 401
BsrI ACTGG 2 cut(s) 204, 1455
BssAI RCCGGY 1 cut(s) 401
BssECI CCNNGG 4 cut(s) 251, 252, 389, 1553
BssMI GATC 5 cut(s) 570, 839, 1095, 1528, 1637
BssT1I CCWWGG 2 cut(s) 389, 1553
Bst2UI CCWGG 2 cut(s) 229, 253
Bst4CI ACNGT 3 cut(s) 158, 1292, 1582
Bst6I CTCTTC 2 cut(s) 871, 884
BstBAI YACGTR 1 cut(s) 1054
BstC8I GCNNGC 7 cut(s) 39, 403, 953, 1116, 1127, 1331, 1346
BstDEI CTNAG 3 cut(s) 372, 567, 812
BstDSI CCRYGG 1 cut(s) 1553
BstF5I GGATG 4 cut(s) 496, 783, 1261, 1488
BstFNI CGCG 1 cut(s) 1434
BstHHI GCGC 1 cut(s) 1434
BstKTI GATC 5 cut(s) 573, 842, 1098, 1531, 1640
BstMAI GTCTC 1 cut(s) 449
BstMBI GATC 5 cut(s) 570, 839, 1095, 1528, 1637
BstMWI GCNNNNNNNGC 1 cut(s) 952
BstNI CCWGG 2 cut(s) 229, 253
BstNSI RCATGY 2 cut(s) 41, 910
BstSCI CCNGG 2 cut(s) 227, 251
BstSFI CTRYAG 3 cut(s) 285, 648, 1701
BstSLI GKGCMC 4 cut(s) 346, 1243, 1335, 1561
BstSNI TACGTA 1 cut(s) 1054
BstUI CGCG 1 cut(s) 1434
BstV2I GAAGAC 1 cut(s) 1005
BstX2I RGATCY 1 cut(s) 839
BstXI CCANNNNNNTGG 1 cut(s) 1140
BstYI RGATCY 1 cut(s) 839
BtgI CCRYGG 1 cut(s) 1553
BtrI CACGTC 1 cut(s) 1159
BtsCI GGATG 4 cut(s) 496, 783, 1261, 1488
BtsIMutI CAGTG 2 cut(s) 1297, 1448
BveI ACCTGC 2 cut(s) 313, 550
Cac8I GCNNGC 7 cut(s) 39, 403, 953, 1116, 1127, 1331, 1346
CaiI CAGNNNCTG 1 cut(s) 689
CfoI GCGC 1 cut(s) 1434
Cfr10I RCCGGY 1 cut(s) 401
Csp6I GTAC 3 cut(s) 709, 1051, 1645
CviQI GTAC 3 cut(s) 709, 1051, 1645
DdeI CTNAG 3 cut(s) 372, 567, 812
DpnI GATC 5 cut(s) 572, 841, 1097, 1530, 1639
DpnII GATC 5 cut(s) 570, 839, 1095, 1528, 1637
DraI TTTAAA 1 cut(s) 553
DraIII CACNNNGTG 4 cut(s) 448, 1292, 1330, 1395
EaeI YGGCCR 1 cut(s) 1592
Eam1104I CTCTTC 2 cut(s) 871, 884
EarI CTCTTC 2 cut(s) 871, 884
EciI GGCGGA 1 cut(s) 247
Eco105I TACGTA 1 cut(s) 1054
Eco130I CCWWGG 2 cut(s) 389, 1553
Eco24I GRGCYC 2 cut(s) 1421, 1561
Eco47I GGWCC 4 cut(s) 176, 545, 1246, 1550
EcoO109I RGGNCCY 1 cut(s) 176
EcoRI GAATTC 1 cut(s) 1300
EcoRII CCWGG 2 cut(s) 227, 251
EcoT14I CCWWGG 2 cut(s) 389, 1553
EcoT38I GRGCYC 2 cut(s) 1421, 1561
ErhI CCWWGG 2 cut(s) 389, 1553
Esp3I CGTCTC 1 cut(s) 449
FaqI GGGAC 3 cut(s) 35, 162, 1568
FblI GTMKAC 2 cut(s) 15, 196
FokI GGATG 4 cut(s) 503, 770, 1248, 1495
FriOI GRGCYC 2 cut(s) 1421, 1561
FseI GGCCGGCC 1 cut(s) 405
GlaI GCGC 1 cut(s) 1433
GsaI CCCAGC 3 cut(s) 62, 349, 950
HapII CCGG 3 cut(s) 166, 402, 665
HhaI GCGC 1 cut(s) 1434
Hin6I GCGC 1 cut(s) 1432
HinP1I GCGC 1 cut(s) 1432
HincII GTYRAC 3 cut(s) 76, 136, 1156
HindII GTYRAC 3 cut(s) 76, 136, 1156
HindIII AAGCTT 2 cut(s) 98, 985
HinfI GANTC 4 cut(s) 222, 745, 774, 1172
HpaI GTTAAC 1 cut(s) 76
HpaII CCGG 3 cut(s) 166, 402, 665
HphI GGTGA 3 cut(s) 1167, 1181, 1426
Hpy166II GTNNAC 8 cut(s) 16, 76, 136, 197, 1051, 1156, 1241, 1691
Hpy188I TCNGA 4 cut(s) 428, 844, 1015, 1533
Hpy188III TCNNGA 3 cut(s) 179, 454, 665
Hpy8I GTNNAC 8 cut(s) 16, 76, 136, 197, 1051, 1156, 1241, 1691
Hpy99I CGWCG 2 cut(s) 218, 1439
HpyAV CCTTC 3 cut(s) 416, 1463, 1469
HpyCH4III ACNGT 3 cut(s) 158, 1292, 1582
HpyCH4IV ACGT 4 cut(s) 736, 1053, 1158, 1425
HpyCH4V TGCA 9 cut(s) 41, 88, 606, 614, 639, 715, 1106, 1241, 1389
HpyF10VI GCNNNNNNNGC 1 cut(s) 952
HpyF3I CTNAG 3 cut(s) 372, 567, 812
HpySE526I ACGT 4 cut(s) 736, 1053, 1158, 1425
HspAI GCGC 1 cut(s) 1432
Kpn2I TCCGGA 1 cut(s) 664
KroI GCCGGC 1 cut(s) 401
KroNI GCCGGC 1 cut(s) 403
KspAI GTTAAC 1 cut(s) 76
Kzo9I GATC 5 cut(s) 570, 839, 1095, 1528, 1637
LmnI GCTCC 2 cut(s) 252, 1360
LweI GCATC 1 cut(s) 75
MaeII ACGT 4 cut(s) 736, 1053, 1158, 1425
MaeIII GTNAC 6 cut(s) 104, 334, 598, 802, 972, 1169
MalI GATC 5 cut(s) 572, 841, 1097, 1530, 1639
MboI GATC 5 cut(s) 570, 839, 1095, 1528, 1637
MboII GAAGA 6 cut(s) 858, 861, 871, 1010, 1498, 1525
MflI RGATCY 1 cut(s) 839
MhlI GDGCHC 6 cut(s) 242, 346, 1243, 1335, 1421, 1561
MlsI TGGCCA 1 cut(s) 1594
MluNI TGGCCA 1 cut(s) 1594
MlyI GAGTC 2 cut(s) 768, 1166
MmeI TCCRAC 3 cut(s) 1277, 1612, 1705
Mox20I TGGCCA 1 cut(s) 1594
MroI TCCGGA 1 cut(s) 664
MroNI GCCGGC 1 cut(s) 401
MscI TGGCCA 1 cut(s) 1594
MslI CAYNNNNRTG 2 cut(s) 1073, 1138
Msp20I TGGCCA 1 cut(s) 1594
MspI CCGG 3 cut(s) 166, 402, 665
MspR9I CCNGG 2 cut(s) 229, 253
Mva1269I GAATGC 2 cut(s) 312, 660
MvaI CCWGG 2 cut(s) 229, 253
MvnI CGCG 1 cut(s) 1434
MwoI GCNNNNNNNGC 1 cut(s) 952
NaeI GCCGGC 1 cut(s) 403
NcoI CCATGG 1 cut(s) 1553
NdeII GATC 5 cut(s) 570, 839, 1095, 1528, 1637
NgoMIV GCCGGC 1 cut(s) 401
NlaIV GGNNCC 6 cut(s) 178, 282, 496, 841, 934, 1559
NmuCI GTSAC 3 cut(s) 104, 972, 1169
NspI RCATGY 2 cut(s) 41, 910
PaeI GCATGC 1 cut(s) 41
PaqCI CACCTGC 2 cut(s) 313, 550
PasI CCCWGGG 1 cut(s) 252
PciI ACATGT 1 cut(s) 906
PcsI WCGNNNNNNNCGW 1 cut(s) 1431
PctI GAATGC 2 cut(s) 312, 660
PdiI GCCGGC 1 cut(s) 403
PfeI GAWTC 2 cut(s) 222, 745
PflMI CCANNNNNTGG 1 cut(s) 1271
PleI GAGTC 2 cut(s) 768, 1166
PpsI GAGTC 2 cut(s) 768, 1166
Ppu21I YACGTR 1 cut(s) 1054
PpuMI RGGWCCY 1 cut(s) 176
PscI ACATGT 1 cut(s) 906
Psp5II RGGWCCY 1 cut(s) 176
Psp6I CCWGG 2 cut(s) 227, 251
PspFI CCCAGC 3 cut(s) 58, 345, 946
PspGI CCWGG 2 cut(s) 227, 251
PspN4I GGNNCC 6 cut(s) 178, 282, 496, 841, 934, 1559
PspOMI GGGCCC 1 cut(s) 1557
PspPPI RGGWCCY 1 cut(s) 176
PstNI CAGNNNCTG 1 cut(s) 689
PsuI RGATCY 1 cut(s) 839
RigI GGCCGGCC 1 cut(s) 405
RsaI GTAC 3 cut(s) 710, 1052, 1646
RsaNI GTAC 3 cut(s) 709, 1051, 1645
RseI CAYNNNNRTG 2 cut(s) 1073, 1138
Sau3AI GATC 5 cut(s) 570, 839, 1095, 1528, 1637
SchI GAGTC 2 cut(s) 768, 1166
ScrFI CCNGG 2 cut(s) 229, 253
SduI GDGCHC 6 cut(s) 242, 346, 1243, 1335, 1421, 1561
SfaNI GCATC 1 cut(s) 75
SfcI CTRYAG 3 cut(s) 285, 648, 1701
SinI GGWCC 4 cut(s) 176, 545, 1246, 1550
SmiMI CAYNNNNRTG 2 cut(s) 1073, 1138
SmlI CTYRAG 3 cut(s) 109, 585, 982
SmoI CTYRAG 3 cut(s) 109, 585, 982
SnaBI TACGTA 1 cut(s) 1054
SphI GCATGC 1 cut(s) 41
SsiI CCGC 2 cut(s) 232, 310
StyD4I CCNGG 2 cut(s) 227, 251
StyI CCWWGG 2 cut(s) 389, 1553
TaaI ACNGT 3 cut(s) 158, 1292, 1582
TaiI ACGT 4 cut(s) 739, 1056, 1161, 1428
TaqI TCGA 4 cut(s) 453, 772, 1098, 1378
TfiI GAWTC 2 cut(s) 222, 745
TscAI CASTG 2 cut(s) 1297, 1455
TseFI GTSAC 3 cut(s) 104, 972, 1169
Tsp45I GTSAC 3 cut(s) 104, 972, 1169
TspDTI ATGAA 7 cut(s) 514, 691, 776, 784, 1206, 1385, 1499
TspGWI ACGGA 3 cut(s) 738, 865, 1597
TspRI CASTG 2 cut(s) 1297, 1455
Van91I CCANNNNNTGG 1 cut(s) 1271
VneI GTGCAC 1 cut(s) 1239
VpaK11BI GGWCC 4 cut(s) 176, 545, 1246, 1550
XapI RAATTY 5 cut(s) 790, 896, 1193, 1300, 1535
XceI RCATGY 2 cut(s) 41, 910
XmiI GTMKAC 2 cut(s) 15, 196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.