Rw2G018630

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
24304490 .. 24307659
3170 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G018630.1

Sequence Viewer

Length: 1446 bp
ATGGGTTCGACACAGTTAGGAGCCAAAGAACTCCATGCAGTCTGTGTCCCCTTCCCAACACAAGGCCATGTTAACCCCATGATGCAATTAGCCAAGCTTCTGCACTCCAGGGGATTCCGCATAACTTTTGTCAACACCGAGTTCAACCACCGGCGTCTAATCCGCTCCAGAGGTTCCGACTCTGTCAAGGGACTACCGGACTTCCAATTTGAGACCATACCGGACGGGTTGCCACCTTCAGATAAAGATGCAACACAAGATATCCCGGCTTTATGTGACTCCACTAGGAAAACATGTCTAGGCCCTTTCAAGGAGCTGGTGACTAAGCTCAATTCCTCATCTGAAGTGCCACAGATTACTTGTATAGTTTCTGATGGTCTCACGGGATTTGGGAGGGAAGTTGCTAAGGAACTAGGGATTCCTGAGGTTCAGTTTTGGACTGCTTCTGCTTGTGGCTTCATGGCGTACCTGCAATACAGCGAACTCGTCAAACGAGGCATTGTGCCATTTAAAGATGAAAGTTTCATGCAAGATGGTACACTCGACAAGCCAATTGATTGGATCCCAGGCATGAAGAATATGAGGCTCAAGGACATCCCTAGCTTTATCAGAGTCACTGATGTCAATGACATAATGTTCGACTTCCAGGGAACCGAAGCACAAAACTGTTTGAAATCCTCTGCAATCATCCTCAACACGTTTGACGAATTTGAGCATGATGTGTTAGAAGAAATCTTCGCCATGTTTCCCAACATTTACACAATAGGTCCACTTGCTTTGCTTGGTAGGCACGTGCTTGAAAACAAATTGGTCAAGTCCCTCAGCTCAGGCTTATGGAAAGAAGATGCAAAATGCCTTGAATGGCTTGACAAACAGAAACCCGATTCAGTTGTATATGTGAATTATGGGAGCATAACTATGATGACAGACCAACATTTAAAAGAATTTGCATGGGGGCTTGCAAATAGCAAGCACCATTTTTTGTGGATTGTTAGGCCTGATGTGGTAAAAGGGGATTCGGTTCTCTTGTCTGAAGAATTTTTCGAGGAGATTAAGGATAGGAGTTACATAGCAAGTTGGTGTCCACAGGAGCAAGTTCTAGCACATCCATCGGTCGGGGTTTTTCTAACTCATTGTGGTTGGAATTCTACTATTGAATCTATATCAGAGGGTGTGCCTGTAATTTGCTGGCCTTTCTTTGCTGAGCAACAGACGAATTGTCGTTTCCTGTGTACTGATTGGGGAATAGGTATGGAGGTGACCAATGATGTTAAACGCGACGAGATTAAAGCGCTTGTTAAGGAAATGCTGGAAGGGGAAAAAGGCGTGAAGATGAGGCAAAAGGCAAAGGAATGGAAAAAGAAAGCAATTGAAGCTACTGCTATTGGAGGATCATCTTACAATAATTTTGACAAATTGATTAAGGAGGCTCTTCATAAGGAATAA

Protein Analysis

481

Amino Acids

54.33

Weight (kDa)

5.66

Isoelectric Point (pI)

36.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 13 - 90 2e-08 Glycosyltransferase, N-terminal domain
UDPGT PF00201 176 - 440 2.5e-25 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 477
AccBSI CCGCTC 1 cut(s) 165
AccII CGCG 1 cut(s) 1278
AciI CCGC 2 cut(s) 118, 163
AclWI GGATC 3 cut(s) 556, 569, 1399
AcsI RAATTY 4 cut(s) 707, 944, 1037, 1144
AcuI CTGAAG 3 cut(s) 222, 363, 1053
AcvI CACGTG 1 cut(s) 793
AcyI GRCGYC 1 cut(s) 154
AfaI GTAC 3 cut(s) 467, 538, 1234
AfeI AGCGCT 1 cut(s) 1293
AfiI CCNNNNNNNGG 3 cut(s) 62, 310, 1115
AflIII ACRYGT 2 cut(s) 293, 696
AgsI TTSAA 7 cut(s) 145, 310, 673, 800, 860, 1157, 1373
AhdI GACNNNNNGTC 1 cut(s) 1218
AjnI CCWGG 3 cut(s) 107, 565, 645
AluBI AGCT 6 cut(s) 97, 316, 328, 603, 825, 1376
AluI AGCT 6 cut(s) 97, 316, 328, 603, 825, 1376
Alw26I GTCTC 2 cut(s) 206, 383
AlwI GGATC 3 cut(s) 556, 569, 1399
Aor51HI AGCGCT 1 cut(s) 1293
AoxI GGCC 4 cut(s) 64, 301, 995, 1190
ApoI RAATTY 4 cut(s) 707, 944, 1037, 1144
ArsI GACNNNNNNTTYG 4 cut(s) 191, 223, 620, 652
AspLEI GCGC 1 cut(s) 1294
AspS9I GGNCC 2 cut(s) 302, 767
AsuC2I CCSGG 1 cut(s) 266
AsuHPI GGTGA 2 cut(s) 331, 1270
AvaII GGWCC 1 cut(s) 767
AxyI CCTNAGG 1 cut(s) 423
BamHI GGATCC 1 cut(s) 561
BbrPI CACGTG 1 cut(s) 793
BbvCI CCTCAGC 1 cut(s) 821
BccI CCATC 3 cut(s) 368, 527, 1117
BcgI CGANNNNNNTGC 2 cut(s) 1092, 1126
BciT130I CCWGG 3 cut(s) 109, 567, 647
BcnI CCSGG 1 cut(s) 266
BcoDI GTCTC 2 cut(s) 206, 383
BfaI CTAG 5 cut(s) 285, 299, 413, 600, 1100
BfoI RGCGCY 1 cut(s) 1295
BfuAI ACCTGC 1 cut(s) 477
BlpI GCTNAGC 1 cut(s) 1203
Bme1390I CCNGG 4 cut(s) 109, 266, 567, 647
Bme18I GGWCC 1 cut(s) 767
BmeRI GACNNNNNGTC 1 cut(s) 1218
BmgT120I GGNCC 2 cut(s) 302, 767
BmiI GGNNCC 4 cut(s) 22, 175, 563, 652
BmrFI CCNGG 4 cut(s) 109, 266, 567, 647
BmsI GCATC 3 cut(s) 72, 238, 835
BpmI CTGGAG 2 cut(s) 91, 151
Bpu10I CCTNAGC 3 cut(s) 405, 821, 826
Bpu1102I GCTNAGC 1 cut(s) 1203
BpuEI CTTGAG 1 cut(s) 572
BpuMI CCSGG 1 cut(s) 266
BsaAI YACGTR 1 cut(s) 793
BsaHI GRCGYC 1 cut(s) 154
BsaI GGTCTC 2 cut(s) 206, 383
BsaJI CCNNGG 3 cut(s) 108, 565, 646
BsaWI WCCGGW 2 cut(s) 196, 220
Bsc4I CCNNNNNNNGG 3 cut(s) 62, 310, 1115
Bse118I RCCGGY 1 cut(s) 150
Bse21I CCTNAGG 1 cut(s) 423
BseBI CCWGG 3 cut(s) 109, 567, 647
BseDI CCNNGG 3 cut(s) 108, 565, 646
BseGI GGATG 3 cut(s) 594, 687, 1105
BseLI CCNNNNNNNGG 3 cut(s) 62, 310, 1115
BseMII CTCAG 4 cut(s) 414, 835, 840, 1194
BseRI GAGGAG 1 cut(s) 1061
BsgI GTGCAG 1 cut(s) 86
Bsh1236I CGCG 1 cut(s) 1278
Bsh1285I CGRYCG 1 cut(s) 1116
BshFI GGCC 4 cut(s) 66, 303, 997, 1192
BsiEI CGRYCG 1 cut(s) 1116
BsiSI CCGG 4 cut(s) 151, 197, 221, 266
BslFI GGGAC 3 cut(s) 32, 204, 802
BslI CCNNNNNNNGG 3 cut(s) 62, 310, 1115
BsmAI GTCTC 2 cut(s) 206, 383
BsmFI GGGAC 3 cut(s) 32, 204, 802
BsnI GGCC 4 cut(s) 66, 303, 997, 1192
Bso31I GGTCTC 2 cut(s) 206, 383
Bsp143I GATC 2 cut(s) 561, 1391
Bsp1720I GCTNAGC 1 cut(s) 1203
BspACI CCGC 2 cut(s) 118, 163
BspANI GGCC 4 cut(s) 66, 303, 997, 1192
BspCNI CTCAG 4 cut(s) 415, 834, 839, 1195
BspFNI CGCG 1 cut(s) 1278
BspLI GGNNCC 4 cut(s) 22, 175, 563, 652
BspMI ACCTGC 1 cut(s) 477
BspPI GGATC 3 cut(s) 556, 569, 1399
BspQI GCTCTTC 1 cut(s) 1437
BspTNI GGTCTC 2 cut(s) 206, 383
BsrBI CCGCTC 1 cut(s) 165
BsrFI RCCGGY 1 cut(s) 150
BssAI RCCGGY 1 cut(s) 150
BssECI CCNNGG 3 cut(s) 108, 565, 646
BssMI GATC 2 cut(s) 561, 1391
BssNI GRCGYC 1 cut(s) 154
Bst2UI CCWGG 3 cut(s) 109, 567, 647
Bst4CI ACNGT 2 cut(s) 15, 668
Bst6I CTCTTC 1 cut(s) 1437
BstACI GRCGYC 1 cut(s) 154
BstBAI YACGTR 1 cut(s) 793
BstC8I GCNNGC 3 cut(s) 960, 971, 1190
BstDEI CTNAG 6 cut(s) 324, 405, 423, 821, 826, 1203
BstEII GGTNACC 1 cut(s) 1258
BstF5I GGATG 3 cut(s) 594, 687, 1105
BstFNI CGCG 1 cut(s) 1278
BstH2I RGCGCY 1 cut(s) 1295
BstHHI GCGC 1 cut(s) 1294
BstKTI GATC 2 cut(s) 564, 1394
BstMAI GTCTC 2 cut(s) 206, 383
BstMBI GATC 2 cut(s) 561, 1391
BstMCI CGRYCG 1 cut(s) 1116
BstMWI GCNNNNNNNGC 2 cut(s) 787, 1373
BstNI CCWGG 3 cut(s) 109, 567, 647
BstNSI RCATGY 1 cut(s) 297
BstPI GGTNACC 1 cut(s) 1258
BstSCI CCNGG 4 cut(s) 107, 264, 565, 645
BstUI CGCG 1 cut(s) 1278
BstX2I RGATCY 1 cut(s) 561
BstXI CCANNNNNNTGG 1 cut(s) 558
BstYI RGATCY 1 cut(s) 561
Bsu36I CCTNAGG 1 cut(s) 423
BsuRI GGCC 4 cut(s) 66, 303, 997, 1192
BtsCI GGATG 3 cut(s) 594, 687, 1105
BtsIMutI CAGTG 1 cut(s) 615
BveI ACCTGC 1 cut(s) 477
Cac8I GCNNGC 3 cut(s) 960, 971, 1190
CfoI GCGC 1 cut(s) 1294
Cfr10I RCCGGY 1 cut(s) 150
Cfr13I GGNCC 2 cut(s) 302, 767
CseI GACGC 1 cut(s) 143
Csp6I GTAC 3 cut(s) 466, 537, 1233
CspCI CAANNNNNGTGG 2 cut(s) 759, 794
CviQI GTAC 3 cut(s) 466, 537, 1233
DdeI CTNAG 6 cut(s) 324, 405, 423, 821, 826, 1203
DpnI GATC 2 cut(s) 563, 1393
DpnII GATC 2 cut(s) 561, 1391
DraI TTTAAA 2 cut(s) 511, 939
DriI GACNNNNNGTC 1 cut(s) 1218
Eam1104I CTCTTC 1 cut(s) 1437
Eam1105I GACNNNNNGTC 1 cut(s) 1218
EarI CTCTTC 1 cut(s) 1437
Eco147I AGGCCT 1 cut(s) 997
Eco31I GGTCTC 2 cut(s) 206, 383
Eco32I GATATC 1 cut(s) 262
Eco47I GGWCC 1 cut(s) 767
Eco47III AGCGCT 1 cut(s) 1293
Eco57I CTGAAG 3 cut(s) 222, 363, 1053
Eco72I CACGTG 1 cut(s) 793
Eco81I CCTNAGG 1 cut(s) 423
Eco91I GGTNACC 1 cut(s) 1258
EcoO109I RGGNCCY 1 cut(s) 302
EcoO65I GGTNACC 1 cut(s) 1258
EcoRI GAATTC 1 cut(s) 1144
EcoRII CCWGG 3 cut(s) 107, 565, 645
EcoRV GATATC 1 cut(s) 262
FaqI GGGAC 3 cut(s) 32, 204, 802
FokI GGATG 3 cut(s) 581, 674, 1092
FspBI CTAG 5 cut(s) 285, 299, 413, 600, 1100
GlaI GCGC 1 cut(s) 1293
GsuI CTGGAG 2 cut(s) 91, 151
HaeII RGCGCY 1 cut(s) 1295
HaeIII GGCC 4 cut(s) 66, 303, 997, 1192
HapII CCGG 4 cut(s) 151, 197, 221, 266
HgaI GACGC 1 cut(s) 143
HhaI GCGC 1 cut(s) 1294
Hin1I GRCGYC 1 cut(s) 154
Hin6I GCGC 1 cut(s) 1292
HinP1I GCGC 1 cut(s) 1292
HincII GTYRAC 2 cut(s) 73, 133
HindII GTYRAC 2 cut(s) 73, 133
HindIII AAGCTT 1 cut(s) 95
HinfI GANTC 8 cut(s) 114, 179, 278, 418, 612, 884, 1016, 1157
HpaI GTTAAC 1 cut(s) 73
HpaII CCGG 4 cut(s) 151, 197, 221, 266
HphI GGTGA 2 cut(s) 331, 1270
Hpy166II GTNNAC 6 cut(s) 73, 133, 539, 770, 1085, 1233
Hpy188I TCNGA 7 cut(s) 178, 241, 343, 373, 611, 1033, 1168
Hpy188III TCNNGA 2 cut(s) 168, 422
Hpy8I GTNNAC 6 cut(s) 73, 133, 539, 770, 1085, 1233
Hpy99I CGWCG 1 cut(s) 1283
HpyAV CCTTC 3 cut(s) 61, 246, 1307
HpyCH4III ACNGT 2 cut(s) 15, 668
HpyCH4IV ACGT 2 cut(s) 698, 792
HpyF10VI GCNNNNNNNGC 2 cut(s) 787, 1373
HpyF3I CTNAG 6 cut(s) 324, 405, 423, 821, 826, 1203
HpySE526I ACGT 2 cut(s) 698, 792
Hsp92I GRCGYC 1 cut(s) 154
HspAI GCGC 1 cut(s) 1292
KspAI GTTAAC 1 cut(s) 73
Kzo9I GATC 2 cut(s) 561, 1391
LguI GCTCTTC 1 cut(s) 1437
LmnI GCTCC 5 cut(s) 20, 170, 313, 909, 1090
LweI GCATC 3 cut(s) 72, 238, 835
MaeI CTAG 5 cut(s) 285, 299, 413, 600, 1100
MaeII ACGT 2 cut(s) 698, 792
MaeIII GTNAC 5 cut(s) 275, 319, 613, 1064, 1258
MalI GATC 2 cut(s) 563, 1393
MbiI CCGCTC 1 cut(s) 165
MboI GATC 2 cut(s) 561, 1391
MboII GAAGA 7 cut(s) 586, 727, 740, 854, 1046, 1342, 1424
MfeI CAATTG 2 cut(s) 552, 1368
MflI RGATCY 1 cut(s) 561
MlyI GAGTC 3 cut(s) 173, 272, 621
MmeI TCCRAC 2 cut(s) 201, 1121
MseI TTAA 8 cut(s) 72, 510, 938, 1053, 1272, 1287, 1299, 1422
MslI CAYNNNNRTG 1 cut(s) 917
MspI CCGG 4 cut(s) 151, 197, 221, 266
MspR9I CCNGG 4 cut(s) 109, 266, 567, 647
MunI CAATTG 2 cut(s) 552, 1368
MvaI CCWGG 3 cut(s) 109, 567, 647
MvnI CGCG 1 cut(s) 1278
MwoI GCNNNNNNNGC 2 cut(s) 787, 1373
NciI CCSGG 1 cut(s) 266
NdeII GATC 2 cut(s) 561, 1391
NlaIV GGNNCC 4 cut(s) 22, 175, 563, 652
NmuCI GTSAC 4 cut(s) 275, 319, 613, 1258
NspI RCATGY 1 cut(s) 297
PceI AGGCCT 1 cut(s) 997
PciI ACATGT 1 cut(s) 293
PciSI GCTCTTC 1 cut(s) 1437
PfeI GAWTC 5 cut(s) 114, 418, 884, 1016, 1157
PflFI GACNNNGTC 1 cut(s) 182
PleI GAGTC 3 cut(s) 173, 272, 620
PmaCI CACGTG 1 cut(s) 793
PmlI CACGTG 1 cut(s) 793
PpsI GAGTC 3 cut(s) 173, 272, 620
Ppu21I YACGTR 1 cut(s) 793
PscI ACATGT 1 cut(s) 293
Psp6I CCWGG 3 cut(s) 107, 565, 645
PspCI CACGTG 1 cut(s) 793
PspEI GGTNACC 1 cut(s) 1258
PspGI CCWGG 3 cut(s) 107, 565, 645
PspN4I GGNNCC 4 cut(s) 22, 175, 563, 652
PspPI GGNCC 2 cut(s) 302, 767
PsuI RGATCY 1 cut(s) 561
PsyI GACNNNGTC 1 cut(s) 182
RsaI GTAC 3 cut(s) 467, 538, 1234
RsaNI GTAC 3 cut(s) 466, 537, 1233
RseI CAYNNNNRTG 1 cut(s) 917
SapI GCTCTTC 1 cut(s) 1437
SaqAI TTAA 8 cut(s) 72, 510, 938, 1053, 1272, 1287, 1299, 1422
Sau3AI GATC 2 cut(s) 561, 1391
Sau96I GGNCC 2 cut(s) 302, 767
SchI GAGTC 3 cut(s) 173, 272, 621
ScrFI CCNGG 4 cut(s) 109, 266, 567, 647
SfaNI GCATC 3 cut(s) 72, 238, 835
SgrAI CRCCGGYG 1 cut(s) 150
SinI GGWCC 1 cut(s) 767
SmiMI CAYNNNNRTG 1 cut(s) 917
SmlI CTYRAG 1 cut(s) 587
SmoI CTYRAG 1 cut(s) 587
SseBI AGGCCT 1 cut(s) 997
SsiI CCGC 2 cut(s) 118, 163
SspMI CTAG 5 cut(s) 285, 299, 413, 600, 1100
StuI AGGCCT 1 cut(s) 997
StyD4I CCNGG 4 cut(s) 107, 264, 565, 645
TaaI ACNGT 2 cut(s) 15, 668
TaiI ACGT 2 cut(s) 701, 795
TaqI TCGA 4 cut(s) 8, 543, 639, 1044
TaqII GACCGA 1 cut(s) 1102
TatI WGTACW 1 cut(s) 1232
TfiI GAWTC 5 cut(s) 114, 418, 884, 1016, 1157
Tru1I TTAA 8 cut(s) 72, 510, 938, 1053, 1272, 1287, 1299, 1422
Tru9I TTAA 8 cut(s) 72, 510, 938, 1053, 1272, 1287, 1299, 1422
TscAI CASTG 1 cut(s) 622
TseFI GTSAC 4 cut(s) 275, 319, 613, 1258
Tsp45I GTSAC 4 cut(s) 275, 319, 613, 1258
TspDTI ATGAA 5 cut(s) 448, 514, 531, 587, 1424
TspRI CASTG 1 cut(s) 622
Tth111I GACNNNGTC 1 cut(s) 182
VpaK11BI GGWCC 1 cut(s) 767
XapI RAATTY 4 cut(s) 707, 944, 1037, 1144
XceI RCATGY 1 cut(s) 297
XspI CTAG 5 cut(s) 285, 299, 413, 600, 1100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.