MD11G1245400.v1.1

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
35627104 .. 35629572
2469 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1245400.v1.1.491

Sequence Viewer

Length: 1482 bp
ATGAGCTCTTTCCAAGTTTTTGGCAAATACGAAAGAGAGATGATGAGTTCAGTAGAACAAGCAACCAAAAAAGGGCATGCAGTTTTTGTCCCATACCCAGCACAAGGCCATGTTAACCCCATGATGCAGCTAGCCAAGCTTCTTCACTCAAGGGGCTTCCACATAACCTTTGTCAACACCGAGTTCAACCACAACCGTTTAATCCGGTCAAACGGTCCCGACTCCGTTAAGGGTCTACCGGACTTTGTGTTCGAGACCATACCGGACGGGTTGCCTCCTTCGGATAAGGATGGGACCCAAGATATTCCAGCTTTATGTGACTCCATTAAGAAGACTTGTTTTGGTCCATTTAAAGAGCTGGTGGCTAAGATCAATTCCTCATCTCAAGTGCCACAAGTTACTTGCATAGTTGCAGATGGTATCATGACCTTTGGGTGCAAAGCTGCTAGAGAATTAGGCATTCCGGAGGTTGTGTTATGGACTGCCTCTGCTTGTGGTTTCATGGGGTACTTGCAATACAACGAACTCGTCAAACGTGGCATCATTCCGTTCAAAGATGAGAATTTCATGCATGATGGCACACTCGATACACCAATTGATTGGATCCCAGGCATGAAAAATGTTCGACTCAAGGACATCCCAAGTTTCATTAGAGTTACTGATCTCAGAGACATAATGTTTAATTACTTGGGATCCGAAGCACGAAACTGTTTGAACTCTTTTGCAATCCTCTTCAACACATTTGACGAATTTGAACACGAAGTGTTAGAGGTAATATCGATAATGTTTCCCAACATTTACACCATTGGCCCCTTTAATTTGTTGGGCAGACATTTCCCCGAAAGCAAGTCACTTAACTCAAGCTTATGGAAAGAAGACATAAAATGTTCGGAATGGCTTGATAAAAAGAAACCCAATTCAGTTGTGTATGTAAATTATGGCAGCATAACGATGATGACAGACCAACATTTGATCGAGTTTGCATGGGGGCTGGCAAATAGCAAGCAACCATTTTTATGGATAGTTAGGGCTGACGTGGTAAAGGGTGACTCACCAATTTTACCTGATGAATTTTTTGAGGAGATTAAGGATAGGGGTTATATTGCAGGTTGGTGTGCACAGGACCAAGTGTTAGCTCATCCATCTGTTGGGGTTTTCCTAACACACAGTGGTTGGAATTCTACCATTGAAAGTATATCTCACGGTGTGCCTGTAATTTGCTGGCCTTTCTTTGCGGAGCAACAAACTAATTGTCGGTACTCATGCACAACGTGGGAGATTGGAATGGAGGTGAGCCCCGACGTGAAGCGCGACGAAATAGAAGCACTTGTTAAGGAAATGATGGAAGGAAAAGGAGGGATAAAGATGAGGGAAAAGGCAAAGGAATGGAAGAAAAAAGCTGTTGAAGCTACTGATGTTGGAGGATCATCGTACAATAATTTTGAGAGATTGTTTAAGGAGGTACTCCAACTTGGTGAATGA

Protein Analysis

494

Amino Acids

55.76

Weight (kDa)

5.57

Isoelectric Point (pI)

37.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 28 - 152 6e-08 Glycosyltransferase, N-terminal domain
UDPGT PF00201 44 - 451 2.4e-26 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1097
AccB7I CCANNNNNTGG 1 cut(s) 1148
AccI GTMKAC 1 cut(s) 235
AccII CGCG 1 cut(s) 1311
AccIII TCCGGA 1 cut(s) 463
AciI CCGC 1 cut(s) 1235
AclWI GGATC 5 cut(s) 598, 611, 687, 700, 1432
AcsI RAATTY 4 cut(s) 562, 749, 1070, 1177
AdeI CACNNNGTG 4 cut(s) 763, 1169, 1207, 1272
AfaI GTAC 4 cut(s) 509, 1259, 1433, 1464
AfiI CCNNNNNNNGG 3 cut(s) 72, 104, 1148
AgsI TTSAA 7 cut(s) 187, 553, 715, 736, 755, 1190, 1406
AjiI CACGTC 2 cut(s) 1036, 1303
AjnI CCWGG 1 cut(s) 607
AloI GAACNNNNNNTCC 2 cut(s) 233, 265
Alw21I GWGCWC 2 cut(s) 8, 1120
Alw26I GTCTC 2 cut(s) 248, 663
Alw44I GTGCAC 1 cut(s) 1116
AlwI GGATC 5 cut(s) 598, 611, 687, 700, 1432
Aor13HI TCCGGA 1 cut(s) 463
AoxI GGCC 3 cut(s) 106, 808, 1223
ApaLI GTGCAC 1 cut(s) 1116
ApeKI GCWGC 3 cut(s) 127, 443, 942
ApoI RAATTY 4 cut(s) 562, 749, 1070, 1177
ArsI GACNNNNNNTTYG 4 cut(s) 233, 265, 1237, 1269
AspLEI GCGC 1 cut(s) 1311
AspS9I GGNCC 5 cut(s) 215, 294, 344, 809, 1123
AsuHPI GGTGA 3 cut(s) 1044, 1058, 1303
AsuNHI GCTAGC 1 cut(s) 130
AvaII GGWCC 4 cut(s) 215, 294, 344, 1123
BaeGI GKGCMC 1 cut(s) 1120
BamHI GGATCC 2 cut(s) 603, 692
BanII GRGCYC 2 cut(s) 8, 1298
BbsI GAAGAC 2 cut(s) 338, 882
Bbv12I GWGCWC 2 cut(s) 8, 1120
BbvI GCAGC 3 cut(s) 139, 430, 954
BccI CCATC 5 cut(s) 284, 410, 569, 1150, 1336
BciT130I CCWGG 1 cut(s) 609
BcoDI GTCTC 2 cut(s) 248, 663
BfaI CTAG 2 cut(s) 131, 447
BfuAI ACCTGC 1 cut(s) 1097
BisI GCNGC 3 cut(s) 128, 444, 943
BlsI GCNGC 3 cut(s) 129, 445, 944
Bme1390I CCNGG 1 cut(s) 609
Bme18I GGWCC 4 cut(s) 215, 294, 344, 1123
BmgBI CACGTC 2 cut(s) 1036, 1303
BmgT120I GGNCC 5 cut(s) 215, 294, 344, 809, 1123
BmiI GGNNCC 6 cut(s) 217, 295, 296, 605, 694, 811
BmrFI CCNGG 1 cut(s) 609
BmsI GCATC 2 cut(s) 114, 549
BmtI GCTAGC 1 cut(s) 134
BpiI GAAGAC 2 cut(s) 338, 882
BpuEI CTTGAG 4 cut(s) 133, 369, 614, 844
Bsa29I ATCGAT 1 cut(s) 779
BsaI GGTCTC 1 cut(s) 248
BsaJI CCNNGG 1 cut(s) 607
BsaWI WCCGGW 4 cut(s) 204, 238, 262, 463
BsaXI ACNNNNNCTCC 2 cut(s) 458, 488
Bsc4I CCNNNNNNNGG 3 cut(s) 72, 104, 1148
BseAI TCCGGA 1 cut(s) 463
BseBI CCWGG 1 cut(s) 609
BseCI ATCGAT 1 cut(s) 779
BseDI CCNNGG 1 cut(s) 607
BseGI GGATG 3 cut(s) 295, 636, 1138
BseLI CCNNNNNNNGG 3 cut(s) 72, 104, 1148
BseMII CTCAG 1 cut(s) 679
BseRI GAGGAG 1 cut(s) 1094
BseSI GKGCMC 1 cut(s) 1120
BseXI GCAGC 3 cut(s) 139, 430, 954
BseYI CCCAGC 1 cut(s) 97
Bsh1236I CGCG 1 cut(s) 1311
BshFI GGCC 3 cut(s) 108, 810, 1225
BshVI ATCGAT 1 cut(s) 779
BsiHKAI GWGCWC 2 cut(s) 8, 1120
BsiSI CCGG 4 cut(s) 205, 239, 263, 464
BslFI GGGAC 3 cut(s) 74, 201, 307
BslI CCNNNNNNNGG 3 cut(s) 72, 104, 1148
BsmAI GTCTC 2 cut(s) 248, 663
BsmFI GGGAC 3 cut(s) 74, 201, 307
BsmI GAATGC 1 cut(s) 459
BsnI GGCC 3 cut(s) 108, 810, 1225
Bso31I GGTCTC 1 cut(s) 248
Bsp1286I GDGCHC 3 cut(s) 8, 1120, 1298
Bsp13I TCCGGA 1 cut(s) 463
Bsp143I GATC 6 cut(s) 369, 603, 661, 692, 972, 1424
BspACI CCGC 1 cut(s) 1235
BspANI GGCC 3 cut(s) 108, 810, 1225
BspCNI CTCAG 1 cut(s) 678
BspDI ATCGAT 1 cut(s) 779
BspEI TCCGGA 1 cut(s) 463
BspFNI CGCG 1 cut(s) 1311
BspHI TCATGA 1 cut(s) 423
BspLI GGNNCC 6 cut(s) 217, 295, 296, 605, 694, 811
BspMI ACCTGC 1 cut(s) 1097
BspOI GCTAGC 1 cut(s) 134
BspPI GGATC 5 cut(s) 598, 611, 687, 700, 1432
BspTNI GGTCTC 1 cut(s) 248
BssECI CCNNGG 1 cut(s) 607
BssMI GATC 6 cut(s) 369, 603, 661, 692, 972, 1424
Bst2UI CCWGG 1 cut(s) 609
Bst4CI ACNGT 5 cut(s) 197, 215, 710, 1169, 1205
Bst6I CTCTTC 1 cut(s) 737
BstC8I GCNNGC 5 cut(s) 78, 132, 993, 1004, 1223
BstDEI CTNAG 2 cut(s) 366, 665
BstF5I GGATG 3 cut(s) 295, 636, 1138
BstFNI CGCG 1 cut(s) 1311
BstHHI GCGC 1 cut(s) 1311
BstKTI GATC 6 cut(s) 372, 606, 664, 695, 975, 1427
BstMAI GTCTC 2 cut(s) 248, 663
BstMBI GATC 6 cut(s) 369, 603, 661, 692, 972, 1424
BstMWI GCNNNNNNNGC 2 cut(s) 136, 1406
BstNI CCWGG 1 cut(s) 609
BstNSI RCATGY 1 cut(s) 80
BstSCI CCNGG 1 cut(s) 607
BstSLI GKGCMC 1 cut(s) 1120
BstUI CGCG 1 cut(s) 1311
BstV1I GCAGC 3 cut(s) 139, 430, 954
BstV2I GAAGAC 2 cut(s) 338, 882
BstX2I RGATCY 2 cut(s) 603, 692
BstXI CCANNNNNNTGG 3 cut(s) 20, 600, 1017
BstYI RGATCY 2 cut(s) 603, 692
Bsu15I ATCGAT 1 cut(s) 779
BsuRI GGCC 3 cut(s) 108, 810, 1225
BsuTUI ATCGAT 1 cut(s) 779
BtrI CACGTC 2 cut(s) 1036, 1303
BtsCI GGATG 3 cut(s) 295, 636, 1138
BtsIMutI CAGTG 1 cut(s) 1174
BveI ACCTGC 1 cut(s) 1097
Cac8I GCNNGC 5 cut(s) 78, 132, 993, 1004, 1223
CciI TCATGA 1 cut(s) 423
CfoI GCGC 1 cut(s) 1311
Cfr13I GGNCC 5 cut(s) 215, 294, 344, 809, 1123
ClaI ATCGAT 1 cut(s) 779
Csp6I GTAC 4 cut(s) 508, 1258, 1432, 1463
CviQI GTAC 4 cut(s) 508, 1258, 1432, 1463
DdeI CTNAG 2 cut(s) 366, 665
DpnI GATC 6 cut(s) 371, 605, 663, 694, 974, 1426
DpnII GATC 6 cut(s) 369, 603, 661, 692, 972, 1424
DraI TTTAAA 1 cut(s) 352
DraIII CACNNNGTG 4 cut(s) 763, 1169, 1207, 1272
Eam1104I CTCTTC 1 cut(s) 737
EarI CTCTTC 1 cut(s) 737
Ecl136II GAGCTC 1 cut(s) 6
Eco24I GRGCYC 2 cut(s) 8, 1298
Eco31I GGTCTC 1 cut(s) 248
Eco47I GGWCC 4 cut(s) 215, 294, 344, 1123
Eco53kI GAGCTC 1 cut(s) 6
EcoICRI GAGCTC 1 cut(s) 6
EcoO109I RGGNCCY 1 cut(s) 294
EcoRI GAATTC 1 cut(s) 1177
EcoRII CCWGG 1 cut(s) 607
EcoT22I ATGCAT 1 cut(s) 573
EcoT38I GRGCYC 2 cut(s) 8, 1298
FaqI GGGAC 3 cut(s) 74, 201, 307
FblI GTMKAC 1 cut(s) 235
Fnu4HI GCNGC 3 cut(s) 128, 444, 943
FokI GGATG 3 cut(s) 302, 623, 1125
FriOI GRGCYC 2 cut(s) 8, 1298
Fsp4HI GCNGC 3 cut(s) 128, 444, 943
FspBI CTAG 2 cut(s) 131, 447
GlaI GCGC 1 cut(s) 1310
GluI GCNGC 3 cut(s) 128, 444, 943
GsaI CCCAGC 1 cut(s) 101
HaeIII GGCC 3 cut(s) 108, 810, 1225
HapII CCGG 4 cut(s) 205, 239, 263, 464
HhaI GCGC 1 cut(s) 1311
Hin6I GCGC 1 cut(s) 1309
HinP1I GCGC 1 cut(s) 1309
HincII GTYRAC 2 cut(s) 115, 175
HindII GTYRAC 2 cut(s) 115, 175
HindIII AAGCTT 2 cut(s) 137, 862
HinfI GANTC 4 cut(s) 221, 320, 627, 1049
HpaI GTTAAC 1 cut(s) 115
HpaII CCGG 4 cut(s) 205, 239, 263, 464
HphI GGTGA 3 cut(s) 1044, 1058, 1303
Hpy166II GTNNAC 4 cut(s) 115, 175, 236, 1118
Hpy188I TCNGA 4 cut(s) 283, 668, 697, 892
Hpy188III TCNNGA 4 cut(s) 218, 253, 424, 464
Hpy8I GTNNAC 4 cut(s) 115, 175, 236, 1118
Hpy99I CGWCG 2 cut(s) 1304, 1316
HpyAV CCTTC 2 cut(s) 288, 1340
HpyCH4III ACNGT 5 cut(s) 197, 215, 710, 1169, 1205
HpyCH4IV ACGT 4 cut(s) 535, 1035, 1271, 1302
HpyF10VI GCNNNNNNNGC 2 cut(s) 136, 1406
HpyF3I CTNAG 2 cut(s) 366, 665
HpySE526I ACGT 4 cut(s) 535, 1035, 1271, 1302
HspAI GCGC 1 cut(s) 1309
KflI GGGWCCC 1 cut(s) 294
Kpn2I TCCGGA 1 cut(s) 463
KspAI GTTAAC 1 cut(s) 115
Kzo9I GATC 6 cut(s) 369, 603, 661, 692, 972, 1424
LmnI GCTCC 1 cut(s) 1237
Lsp1109I GCAGC 3 cut(s) 139, 430, 954
LweI GCATC 2 cut(s) 114, 549
MaeI CTAG 2 cut(s) 131, 447
MaeII ACGT 4 cut(s) 535, 1035, 1271, 1302
MaeIII GTNAC 5 cut(s) 317, 397, 655, 849, 1046
MalI GATC 6 cut(s) 371, 605, 663, 694, 974, 1426
MboI GATC 6 cut(s) 369, 603, 661, 692, 972, 1424
MboII GAAGA 5 cut(s) 134, 343, 724, 887, 1402
MfeI CAATTG 1 cut(s) 594
MflI RGATCY 2 cut(s) 603, 692
MhlI GDGCHC 3 cut(s) 8, 1120, 1298
MlyI GAGTC 4 cut(s) 215, 314, 621, 1043
MmeI TCCRAC 2 cut(s) 1154, 1399
Mph1103I ATGCAT 1 cut(s) 573
MroI TCCGGA 1 cut(s) 463
MslI CAYNNNNRTG 2 cut(s) 950, 1015
MspI CCGG 4 cut(s) 205, 239, 263, 464
MspR9I CCNGG 1 cut(s) 609
MunI CAATTG 1 cut(s) 594
Mva1269I GAATGC 1 cut(s) 459
MvaI CCWGG 1 cut(s) 609
MvnI CGCG 1 cut(s) 1311
MwoI GCNNNNNNNGC 2 cut(s) 136, 1406
NdeII GATC 6 cut(s) 369, 603, 661, 692, 972, 1424
NheI GCTAGC 1 cut(s) 130
NlaIV GGNNCC 6 cut(s) 217, 295, 296, 605, 694, 811
NmuCI GTSAC 3 cut(s) 317, 849, 1046
NsiI ATGCAT 1 cut(s) 573
NspI RCATGY 1 cut(s) 80
PaeI GCATGC 1 cut(s) 80
PagI TCATGA 1 cut(s) 423
PcsI WCGNNNNNNNCGW 1 cut(s) 1308
PctI GAATGC 1 cut(s) 459
PflMI CCANNNNNTGG 1 cut(s) 1148
PkrI GCNGC 3 cut(s) 129, 445, 944
PleI GAGTC 4 cut(s) 215, 314, 621, 1043
PpsI GAGTC 4 cut(s) 215, 314, 621, 1043
PpuMI RGGWCCY 1 cut(s) 294
Psp124BI GAGCTC 1 cut(s) 8
Psp5II RGGWCCY 1 cut(s) 294
Psp6I CCWGG 1 cut(s) 607
PspFI CCCAGC 1 cut(s) 97
PspGI CCWGG 1 cut(s) 607
PspN4I GGNNCC 6 cut(s) 217, 295, 296, 605, 694, 811
PspPI GGNCC 5 cut(s) 215, 294, 344, 809, 1123
PspPPI RGGWCCY 1 cut(s) 294
PsuI RGATCY 2 cut(s) 603, 692
RsaI GTAC 4 cut(s) 509, 1259, 1433, 1464
RsaNI GTAC 4 cut(s) 508, 1258, 1432, 1463
RseI CAYNNNNRTG 2 cut(s) 950, 1015
SacI GAGCTC 1 cut(s) 8
SatI GCNGC 3 cut(s) 128, 444, 943
Sau3AI GATC 6 cut(s) 369, 603, 661, 692, 972, 1424
Sau96I GGNCC 5 cut(s) 215, 294, 344, 809, 1123
SchI GAGTC 4 cut(s) 215, 314, 621, 1043
ScrFI CCNGG 1 cut(s) 609
SduI GDGCHC 3 cut(s) 8, 1120, 1298
SfaNI GCATC 2 cut(s) 114, 549
SinI GGWCC 4 cut(s) 215, 294, 344, 1123
SmiMI CAYNNNNRTG 2 cut(s) 950, 1015
SmlI CTYRAG 4 cut(s) 148, 384, 629, 859
SmoI CTYRAG 4 cut(s) 148, 384, 629, 859
SphI GCATGC 1 cut(s) 80
SsiI CCGC 1 cut(s) 1235
SspMI CTAG 2 cut(s) 131, 447
SstI GAGCTC 1 cut(s) 8
StyD4I CCNGG 1 cut(s) 607
TaaI ACNGT 5 cut(s) 197, 215, 710, 1169, 1205
TaiI ACGT 4 cut(s) 538, 1038, 1274, 1305
TaqI TCGA 5 cut(s) 252, 585, 625, 779, 975
TscAI CASTG 1 cut(s) 1174
TseFI GTSAC 3 cut(s) 317, 849, 1046
TseI GCWGC 3 cut(s) 127, 443, 942
Tsp45I GTSAC 3 cut(s) 317, 849, 1046
TspDTI ATGAA 5 cut(s) 490, 556, 629, 637, 1083
TspGWI ACGGA 2 cut(s) 214, 537
TspRI CASTG 1 cut(s) 1174
Van91I CCANNNNNTGG 1 cut(s) 1148
VneI GTGCAC 1 cut(s) 1116
VpaK11BI GGWCC 4 cut(s) 215, 294, 344, 1123
XapI RAATTY 4 cut(s) 562, 749, 1070, 1177
XceI RCATGY 1 cut(s) 80
XmiI GTMKAC 1 cut(s) 235
XspI CTAG 2 cut(s) 131, 447
Zsp2I ATGCAT 1 cut(s) 573
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.