pycom01g05760

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
OG0000867
Physical Location & Seq
Forward (+)
5630396 .. 5632536
2141 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g05760.2

Sequence Viewer

Length: 1440 bp
ATGAGTCCATTAGAACCAGCAACCAAAAAAGGGCATGCGGTTTTTGTCCCATACCCAGCACAAGGCCATGTTAACCCCATGATGCAATTGGCCAAGTTTATTCACTCAAGGGACTTCCACATAACCTTTGTCAACACCGAATTCAACCACAACCGTTTAATCCGGTCAAAAGGTCCCGACTCCGTTAAGGGTCTACCGGACTTTGTGTTCGAGACCATACCGGACGGGTTACCTCCTTCGGATAAGGATGGAACCCAAGATGTTCCAACTTTATGTGACTCCATTAAGAAAACTTGTCTTGGTCCGTTTAAAGAGCTAGTGACTAAGATCAATTCCTCATCTCAAGTGCCACAAGTTACTTGCATAGTTGCAGATGGTACCATGACCTTCGGGAGCAAAGCTGCTAGAGAGTTAGGCATTCCGGAGGTTACGTTATGGACGGCCTCTGCTTGTGGCTTCATGGGGTACTTGCAATACAGCGAACTTGTCAAACGTGGCATTATTCCGTTCAAAGATGAGAATTTCATGCATGATGGCACACTCGATACACCAACTGATTGGATCCCAGGTATGAAAAATGTTCGGCTCAAGGACATCCCAAGTTTCATTAGAGTTACTGATCTCAACGACATAATGTTTAATTACTTGGGATCCGAATCACTTAACTGTTTGAACTCTTCTGCAATCATCTTCAACACATTTGACGAATTCGAACGCGAAGTGTTAGAGGTAATATCGACAATGTTCCCCAACATATACACCATCGGCCCCCTTAATTTGCTTGGCAGGCATTTCCCCGAAAGCAAGTCACTTAACTCAAACTTATGGAAAGAAGACACAAAATGTTTGGAATGGCTTGATAAAAAGAAACCCAATTCAGTTGTGTACGTCAATTATGGCAGCGTAACGATGATGACAGGCCAGCATTTGATTGAGTTTGCATGGGGGCTGGCAAATAGCAAGCACCCATTTTTATGGATAGTTAGGGCTGACGTGGTAAAGGGCGACTCACCAATTTTGCCCGAGGAATTTTTGGAGGAGATTAAGGATAGGGGTTATATTACAGGTTGGTGTGCACAGGACCAAGTGTTGGCTCATCCATCTGTTGGGGCTTTCCTAACACACAGTGGTTGGAATTCTACCATTGAAACTATATCTCATGGTGTGCCAGTAATTTGTTGGCCTTTCTTTGCGGAGCAACAAACGAATTGTCGGTACTCATGCACAACGTGGGAGATTGGAATGGAGGTGAGCCCTGATGTGAAGCGCCATGAAATTGAAGCACTTGTTAAGGAAATGCTGGAAGGAGAAGGAGGGATGAAGATGAGGGAAAAGGCAAAGGAATGGAAGAAAAAAGCTGTTGAAGCTACTGATATTGGAGGATCATCATACAATAATTTTGAGAGATTGCTTAAGGAGGCACTCCAACTTGGTGAATGA

Protein Analysis

480

Amino Acids

53.87

Weight (kDa)

5.55

Isoelectric Point (pI)

39.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 377
AccB1I GGYRCC 1 cut(s) 377
AccB7I CCANNNNNTGG 2 cut(s) 1090, 1106
AccI GTMKAC 1 cut(s) 193
AccII CGCG 1 cut(s) 717
AccIII TCCGGA 1 cut(s) 421
AciI CCGC 2 cut(s) 38, 1193
AclWI GGATC 5 cut(s) 556, 569, 645, 658, 1390
AcoI YGGCCR 1 cut(s) 90
AcsI RAATTY 5 cut(s) 140, 520, 707, 1028, 1135
AdeI CACNNNGTG 2 cut(s) 1127, 1230
AfaI GTAC 4 cut(s) 379, 467, 887, 1217
AfiI CCNNNNNNNGG 4 cut(s) 30, 62, 1090, 1106
AflII CTTAAG 1 cut(s) 1412
AgsI TTSAA 7 cut(s) 145, 511, 673, 694, 1148, 1280, 1364
AjiI CACGTC 1 cut(s) 994
AjnI CCWGG 1 cut(s) 565
AloI GAACNNNNNNTCC 2 cut(s) 191, 223
AluBI AGCT 4 cut(s) 316, 401, 1358, 1367
AluI AGCT 4 cut(s) 316, 401, 1358, 1367
Alw21I GWGCWC 1 cut(s) 1078
Alw26I GTCTC 1 cut(s) 206
Alw44I GTGCAC 1 cut(s) 1074
AlwI GGATC 5 cut(s) 556, 569, 645, 658, 1390
Ama87I CYCGRG 1 cut(s) 1022
Aor13HI TCCGGA 1 cut(s) 421
AoxI GGCC 6 cut(s) 64, 90, 441, 766, 919, 1181
ApaLI GTGCAC 1 cut(s) 1074
ApeKI GCWGC 2 cut(s) 401, 900
ApoI RAATTY 5 cut(s) 140, 520, 707, 1028, 1135
ArsI GACNNNNNNTTYG 4 cut(s) 191, 223, 1195, 1227
Asp718I GGTACC 1 cut(s) 377
AspLEI GCGC 1 cut(s) 1269
AspS9I GGNCC 4 cut(s) 173, 302, 767, 1081
AsuHPI GGTGA 2 cut(s) 1002, 1261
AsuII TTCGAA 1 cut(s) 711
AvaI CYCGRG 1 cut(s) 1022
AvaII GGWCC 3 cut(s) 173, 302, 1081
BaeGI GKGCMC 1 cut(s) 1078
BalI TGGCCA 1 cut(s) 92
BamHI GGATCC 2 cut(s) 561, 650
BanI GGYRCC 1 cut(s) 377
BanII GRGCYC 1 cut(s) 1256
BbsI GAAGAC 1 cut(s) 840
Bbv12I GWGCWC 1 cut(s) 1078
BbvI GCAGC 2 cut(s) 388, 912
BccI CCATC 5 cut(s) 242, 368, 527, 770, 1108
BceAI ACGGC 1 cut(s) 456
BciT130I CCWGG 1 cut(s) 567
BcoDI GTCTC 1 cut(s) 206
BfaI CTAG 2 cut(s) 317, 405
BfoI RGCGCY 1 cut(s) 1270
BfrI CTTAAG 1 cut(s) 1412
BisI GCNGC 2 cut(s) 402, 901
BlsI GCNGC 2 cut(s) 403, 902
Bme1390I CCNGG 1 cut(s) 567
Bme18I GGWCC 3 cut(s) 173, 302, 1081
BmeT110I CYCGRG 1 cut(s) 1022
BmgBI CACGTC 1 cut(s) 994
BmgT120I GGNCC 4 cut(s) 173, 302, 767, 1081
BmiI GGNNCC 6 cut(s) 175, 253, 379, 563, 652, 769
BmrFI CCNGG 1 cut(s) 567
BmsI GCATC 1 cut(s) 72
BpiI GAAGAC 1 cut(s) 840
Bpu14I TTCGAA 1 cut(s) 711
BpuEI CTTGAG 3 cut(s) 91, 327, 572
BsaBI GATNNNNATC 1 cut(s) 655
BsaI GGTCTC 1 cut(s) 206
BsaJI CCNNGG 2 cut(s) 565, 1023
BsaWI WCCGGW 4 cut(s) 162, 196, 220, 421
BsaXI ACNNNNNCTCC 2 cut(s) 416, 446
Bsc4I CCNNNNNNNGG 4 cut(s) 30, 62, 1090, 1106
Bse1I ACTGG 1 cut(s) 1169
Bse8I GATNNNNATC 1 cut(s) 655
BseAI TCCGGA 1 cut(s) 421
BseBI CCWGG 1 cut(s) 567
BseDI CCNNGG 2 cut(s) 565, 1023
BseGI GGATG 4 cut(s) 253, 594, 1096, 1323
BseJI GATNNNNATC 1 cut(s) 655
BseLI CCNNNNNNNGG 4 cut(s) 30, 62, 1090, 1106
BseNI ACTGG 1 cut(s) 1169
BseRI GAGGAG 1 cut(s) 1052
BseSI GKGCMC 1 cut(s) 1078
BseXI GCAGC 2 cut(s) 388, 912
BseYI CCCAGC 1 cut(s) 55
Bsh1236I CGCG 1 cut(s) 717
BshFI GGCC 6 cut(s) 66, 92, 443, 768, 921, 1183
BshNI GGYRCC 1 cut(s) 377
BsiHKAI GWGCWC 1 cut(s) 1078
BsiHKCI CYCGRG 1 cut(s) 1022
BsiSI CCGG 4 cut(s) 163, 197, 221, 422
BslFI GGGAC 3 cut(s) 32, 125, 159
BslI CCNNNNNNNGG 4 cut(s) 30, 62, 1090, 1106
BsmAI GTCTC 1 cut(s) 206
BsmFI GGGAC 3 cut(s) 32, 125, 159
BsmI GAATGC 1 cut(s) 417
BsnI GGCC 6 cut(s) 66, 92, 443, 768, 921, 1183
Bso31I GGTCTC 1 cut(s) 206
BsoBI CYCGRG 1 cut(s) 1022
Bsp119I TTCGAA 1 cut(s) 711
Bsp1286I GDGCHC 2 cut(s) 1078, 1256
Bsp13I TCCGGA 1 cut(s) 421
Bsp143I GATC 5 cut(s) 327, 561, 619, 650, 1382
BspACI CCGC 2 cut(s) 38, 1193
BspANI GGCC 6 cut(s) 66, 92, 443, 768, 921, 1183
BspEI TCCGGA 1 cut(s) 421
BspFNI CGCG 1 cut(s) 717
BspLI GGNNCC 6 cut(s) 175, 253, 379, 563, 652, 769
BspPI GGATC 5 cut(s) 556, 569, 645, 658, 1390
BspT104I TTCGAA 1 cut(s) 711
BspT107I GGYRCC 1 cut(s) 377
BspTI CTTAAG 1 cut(s) 1412
BspTNI GGTCTC 1 cut(s) 206
BsrI ACTGG 1 cut(s) 1169
BssECI CCNNGG 2 cut(s) 565, 1023
BssMI GATC 5 cut(s) 327, 561, 619, 650, 1382
Bst2UI CCWGG 1 cut(s) 567
Bst4CI ACNGT 3 cut(s) 155, 668, 1127
Bst6I CTCTTC 1 cut(s) 682
BstAFI CTTAAG 1 cut(s) 1412
BstBI TTCGAA 1 cut(s) 711
BstC8I GCNNGC 5 cut(s) 36, 788, 923, 951, 962
BstDEI CTNAG 1 cut(s) 324
BstEII GGTNACC 1 cut(s) 228
BstF5I GGATG 4 cut(s) 253, 594, 1096, 1323
BstFNI CGCG 1 cut(s) 717
BstH2I RGCGCY 1 cut(s) 1270
BstHHI GCGC 1 cut(s) 1269
BstKTI GATC 5 cut(s) 330, 564, 622, 653, 1385
BstMAI GTCTC 1 cut(s) 206
BstMBI GATC 5 cut(s) 327, 561, 619, 650, 1382
BstMWI GCNNNNNNNGC 2 cut(s) 787, 1364
BstNI CCWGG 1 cut(s) 567
BstNSI RCATGY 1 cut(s) 38
BstPI GGTNACC 1 cut(s) 228
BstSCI CCNGG 1 cut(s) 565
BstSLI GKGCMC 1 cut(s) 1078
BstUI CGCG 1 cut(s) 717
BstV1I GCAGC 2 cut(s) 388, 912
BstV2I GAAGAC 1 cut(s) 840
BstX2I RGATCY 2 cut(s) 561, 650
BstXI CCANNNNNNTGG 2 cut(s) 558, 975
BstYI RGATCY 2 cut(s) 561, 650
BsuRI GGCC 6 cut(s) 66, 92, 443, 768, 921, 1183
BtrI CACGTC 1 cut(s) 994
BtsCI GGATG 4 cut(s) 253, 594, 1096, 1323
BtsIMutI CAGTG 1 cut(s) 1132
Cac8I GCNNGC 5 cut(s) 36, 788, 923, 951, 962
CfoI GCGC 1 cut(s) 1269
Cfr13I GGNCC 4 cut(s) 173, 302, 767, 1081
Csp6I GTAC 4 cut(s) 378, 466, 886, 1216
CviQI GTAC 4 cut(s) 378, 466, 886, 1216
DdeI CTNAG 1 cut(s) 324
DpnI GATC 5 cut(s) 329, 563, 621, 652, 1384
DpnII GATC 5 cut(s) 327, 561, 619, 650, 1382
DraI TTTAAA 1 cut(s) 310
DraIII CACNNNGTG 2 cut(s) 1127, 1230
EaeI YGGCCR 1 cut(s) 90
Eam1104I CTCTTC 1 cut(s) 682
EarI CTCTTC 1 cut(s) 682
Eco24I GRGCYC 1 cut(s) 1256
Eco31I GGTCTC 1 cut(s) 206
Eco47I GGWCC 3 cut(s) 173, 302, 1081
Eco88I CYCGRG 1 cut(s) 1022
Eco91I GGTNACC 1 cut(s) 228
EcoO109I RGGNCCY 1 cut(s) 173
EcoO65I GGTNACC 1 cut(s) 228
EcoRI GAATTC 3 cut(s) 140, 707, 1135
EcoRII CCWGG 1 cut(s) 565
EcoT22I ATGCAT 1 cut(s) 531
EcoT38I GRGCYC 1 cut(s) 1256
FaqI GGGAC 3 cut(s) 32, 125, 159
FblI GTMKAC 1 cut(s) 193
Fnu4HI GCNGC 2 cut(s) 402, 901
FokI GGATG 4 cut(s) 260, 581, 1083, 1330
FriOI GRGCYC 1 cut(s) 1256
Fsp4HI GCNGC 2 cut(s) 402, 901
FspBI CTAG 2 cut(s) 317, 405
GlaI GCGC 1 cut(s) 1268
GluI GCNGC 2 cut(s) 402, 901
GsaI CCCAGC 1 cut(s) 59
HaeII RGCGCY 1 cut(s) 1270
HaeIII GGCC 6 cut(s) 66, 92, 443, 768, 921, 1183
HapII CCGG 4 cut(s) 163, 197, 221, 422
HhaI GCGC 1 cut(s) 1269
Hin6I GCGC 1 cut(s) 1267
HinP1I GCGC 1 cut(s) 1267
HincII GTYRAC 2 cut(s) 73, 133
HindII GTYRAC 2 cut(s) 73, 133
HinfI GANTC 5 cut(s) 4, 179, 278, 656, 1007
HpaI GTTAAC 1 cut(s) 73
HpaII CCGG 4 cut(s) 163, 197, 221, 422
HphI GGTGA 2 cut(s) 1002, 1261
Hpy166II GTNNAC 5 cut(s) 73, 133, 194, 886, 1076
Hpy188I TCNGA 2 cut(s) 241, 655
Hpy188III TCNNGA 4 cut(s) 176, 211, 391, 422
Hpy8I GTNNAC 5 cut(s) 73, 133, 194, 886, 1076
HpyAV CCTTC 4 cut(s) 246, 397, 1298, 1304
HpyCH4III ACNGT 3 cut(s) 155, 668, 1127
HpyCH4IV ACGT 5 cut(s) 431, 493, 888, 993, 1229
HpyCH4V TGCA 9 cut(s) 85, 363, 371, 472, 529, 683, 941, 1076, 1224
HpyF10VI GCNNNNNNNGC 2 cut(s) 787, 1364
HpyF3I CTNAG 1 cut(s) 324
HpySE526I ACGT 5 cut(s) 431, 493, 888, 993, 1229
HspAI GCGC 1 cut(s) 1267
Kpn2I TCCGGA 1 cut(s) 421
KpnI GGTACC 1 cut(s) 381
KspAI GTTAAC 1 cut(s) 73
Kzo9I GATC 5 cut(s) 327, 561, 619, 650, 1382
LmnI GCTCC 2 cut(s) 393, 1195
Lsp1109I GCAGC 2 cut(s) 388, 912
LweI GCATC 1 cut(s) 72
MaeI CTAG 2 cut(s) 317, 405
MaeII ACGT 5 cut(s) 431, 493, 888, 993, 1229
MaeIII GTNAC 8 cut(s) 228, 275, 319, 355, 427, 613, 807, 904
MalI GATC 5 cut(s) 329, 563, 621, 652, 1384
MboI GATC 5 cut(s) 327, 561, 619, 650, 1382
MboII GAAGA 5 cut(s) 669, 682, 845, 1333, 1360
MfeI CAATTG 1 cut(s) 86
MflI RGATCY 2 cut(s) 561, 650
MhlI GDGCHC 2 cut(s) 1078, 1256
MlsI TGGCCA 1 cut(s) 92
MluNI TGGCCA 1 cut(s) 92
MlyI GAGTC 4 cut(s) 13, 173, 272, 1001
MmeI TCCRAC 2 cut(s) 290, 1112
Mox20I TGGCCA 1 cut(s) 92
Mph1103I ATGCAT 1 cut(s) 531
MroI TCCGGA 1 cut(s) 421
MscI TGGCCA 1 cut(s) 92
MslI CAYNNNNRTG 1 cut(s) 973
Msp20I TGGCCA 1 cut(s) 92
MspCI CTTAAG 1 cut(s) 1412
MspI CCGG 4 cut(s) 163, 197, 221, 422
MspR9I CCNGG 1 cut(s) 567
MunI CAATTG 1 cut(s) 86
Mva1269I GAATGC 1 cut(s) 417
MvaI CCWGG 1 cut(s) 567
MvnI CGCG 1 cut(s) 717
MwoI GCNNNNNNNGC 2 cut(s) 787, 1364
NdeII GATC 5 cut(s) 327, 561, 619, 650, 1382
NlaIV GGNNCC 6 cut(s) 175, 253, 379, 563, 652, 769
NmuCI GTSAC 3 cut(s) 275, 319, 807
NsiI ATGCAT 1 cut(s) 531
NspI RCATGY 1 cut(s) 38
NspV TTCGAA 1 cut(s) 711
PaeI GCATGC 1 cut(s) 38
PctI GAATGC 1 cut(s) 417
PfeI GAWTC 1 cut(s) 656
PflMI CCANNNNNTGG 2 cut(s) 1090, 1106
PkrI GCNGC 2 cut(s) 403, 902
PleI GAGTC 4 cut(s) 12, 173, 272, 1001
PpsI GAGTC 4 cut(s) 12, 173, 272, 1001
PpuMI RGGWCCY 1 cut(s) 173
Psp5II RGGWCCY 1 cut(s) 173
Psp6I CCWGG 1 cut(s) 565
PspEI GGTNACC 1 cut(s) 228
PspFI CCCAGC 1 cut(s) 55
PspGI CCWGG 1 cut(s) 565
PspN4I GGNNCC 6 cut(s) 175, 253, 379, 563, 652, 769
PspPI GGNCC 4 cut(s) 173, 302, 767, 1081
PspPPI RGGWCCY 1 cut(s) 173
PsuI RGATCY 2 cut(s) 561, 650
RsaI GTAC 4 cut(s) 379, 467, 887, 1217
RsaNI GTAC 4 cut(s) 378, 466, 886, 1216
RseI CAYNNNNRTG 1 cut(s) 973
SatI GCNGC 2 cut(s) 402, 901
Sau3AI GATC 5 cut(s) 327, 561, 619, 650, 1382
Sau96I GGNCC 4 cut(s) 173, 302, 767, 1081
SchI GAGTC 4 cut(s) 13, 173, 272, 1001
ScrFI CCNGG 1 cut(s) 567
SduI GDGCHC 2 cut(s) 1078, 1256
SfaNI GCATC 1 cut(s) 72
SfuI TTCGAA 1 cut(s) 711
SinI GGWCC 3 cut(s) 173, 302, 1081
SmiMI CAYNNNNRTG 1 cut(s) 973
SmlI CTYRAG 4 cut(s) 106, 342, 587, 1412
SmoI CTYRAG 4 cut(s) 106, 342, 587, 1412
SphI GCATGC 1 cut(s) 38
SsiI CCGC 2 cut(s) 38, 1193
SspMI CTAG 2 cut(s) 317, 405
StyD4I CCNGG 1 cut(s) 565
TaaI ACNGT 3 cut(s) 155, 668, 1127
TaiI ACGT 5 cut(s) 434, 496, 891, 996, 1232
TaqI TCGA 4 cut(s) 210, 543, 711, 737
TfiI GAWTC 1 cut(s) 656
TscAI CASTG 1 cut(s) 1132
TseFI GTSAC 3 cut(s) 275, 319, 807
TseI GCWGC 2 cut(s) 401, 900
Tsp45I GTSAC 3 cut(s) 275, 319, 807
TspDTI ATGAA 6 cut(s) 448, 514, 587, 595, 1287, 1334
TspGWI ACGGA 3 cut(s) 172, 294, 495
TspRI CASTG 1 cut(s) 1132
Van91I CCANNNNNTGG 2 cut(s) 1090, 1106
Vha464I CTTAAG 1 cut(s) 1412
VneI GTGCAC 1 cut(s) 1074
VpaK11BI GGWCC 3 cut(s) 173, 302, 1081
XapI RAATTY 5 cut(s) 140, 520, 707, 1028, 1135
XceI RCATGY 1 cut(s) 38
XcmI CCANNNNNNNNNTGG 2 cut(s) 85, 1176
XmiI GTMKAC 1 cut(s) 193
XspI CTAG 2 cut(s) 317, 405
Zsp2I ATGCAT 1 cut(s) 531
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.