Rh1AG081700

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
14045177 .. 14061219
16043 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG081700.1

Sequence Viewer

Length: 1506 bp
ATGGGTTCAACACAACCAGGAGCCAAAGAACTCCATGCAGTCTGTGTCCCTTTCCCAGCACAAGGCCATGTTAACCCTATGATGCAATTAGCCAAGCTTCTGTACTCCAGGGGATTCCACATAACCTTTGTCAACTCTGAGTTCAACCACCGGCGTTTAATCCGGTCCAAAGGGTCTGACTCCGTCAAGGGACTACCGGACTTCCAATTCGCGACCATACCAGATGGGCTGCCACCTTCAAATAAAGATGCAACCCAAGATGTTCCAACTCTATGCGACTCCATCAGGAAAACATGTCTAGGCCCTTTCAAGGAGCTGGTGACTAAACTCAATTCCTCGTCTGAAGTGCCACAGATTACTTGTATAGTTTCTGACGGGATCATGGGATTTGGGAGGGAAGTTGCTAAGGAACTGGGGATTCCTGGGGTTCAGCTTTGGACTTCTTCTGCTTGTGGCTTCATGGGGTACCTGCAATACGGCGAACTCGTCAAACGAGGCATTGTTCCATCCAAAGATGAAAGTTTCATGCAAGATGGTACACTCGATGAGCCAATTGATTGGATCCCAGGCATGAGGAATATGAGGCTCAAGGACATCCCTAGCTTTATCAGAGTCACTAATGTCAATGATATAATGTTCGACTACTTGAGATCTGAAGCACAACACTGCTTGAAATCCTCTGCAATCATCTTCAACACGTTTGACGAATTGGAGCATGAAGTGTTAAAAGAAATCTCAGCCATGTTTCCCAACATTTACACAATAGGTCCACTTGCTTTGCTTGGTAGGCATGGGCCCGAAAGCAAATTGGTCAAGTCCCTAAGCTCAGGCTTATGGAAAGAAGACGCAAAATGCATCGAATGGCTTGACAAACAGAAACCTGATTCGGTTGTGTATGTGAATTATGGGAGCATAGCTATGATGACAGACCAACATTTGAAAGAATTTGCATGGGGACTTGCAAATAGCCAGCACCATTTTTTGTGGATTGTCAGGCCTGATGTTGTAAAAGGTGATTCGGTAGTTTTACCCCAAGAATTTTTTGAGGAGATAAAGAATAGGGGTTATGTAACAAGTTGGTGCCCACAGGAGCAAGTGCTAGCACATCCATCAGTTGGGGTTTTTCTAACACATTATGGTTGGAATTCTACGATTGAAACTATATCGGAGGGAGTGCCTGTACTTTGCTGGCCTTTCCGTTCCGAGCAACTTACGAATTGCCGTTTCTTGTGTACTGATTGGGGAATTGGTATGGAGGTAAACAATGATGTTAAGTGCAATGAGATTGAAGCACTTGTTAAGGAAATGCTGGAAGGGGAGAAAGGCATGAAGATGAGGCGAAAGGCAGAGGAATGGAAGAAGAAAGCAATAGCAGCTACTGACACTGGAGGATCATCGTACAATAATTTTGAGAGACTGATTAAGAACTGCAATGCAACGAGTATGCAGAATCTAAGGAGTGGCTGTTGCCCAGTACTCTCACTTGTCTCAAGATCTACCTTCTGA

Protein Analysis

501

Amino Acids

56.2

Weight (kDa)

6.21

Isoelectric Point (pI)

43.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 13 - 131 1e-08 Glycosyltransferase, N-terminal domain
UDPGT PF00201 174 - 440 7.9e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 477
Acc65I GGTACC 1 cut(s) 465
AccB1I GGYRCC 2 cut(s) 465, 1080
AccB7I CCANNNNNTGG 1 cut(s) 1115
AccII CGCG 1 cut(s) 212
AclWI GGATC 4 cut(s) 386, 556, 569, 1399
AcsI RAATTY 3 cut(s) 944, 1037, 1144
AcuI CTGAAG 2 cut(s) 363, 675
AfaI GTAC 7 cut(s) 104, 467, 538, 1182, 1234, 1400, 1476
AfiI CCNNNNNNNGG 3 cut(s) 62, 310, 1115
AflIII ACRYGT 2 cut(s) 293, 696
AgsI TTSAA 9 cut(s) 9, 145, 240, 310, 673, 694, 940, 1157, 1289
AjnI CCWGG 4 cut(s) 16, 107, 421, 565
AluBI AGCT 7 cut(s) 97, 316, 433, 603, 825, 917, 1376
AluI AGCT 7 cut(s) 97, 316, 433, 603, 825, 917, 1376
Alw26I GTCTC 2 cut(s) 1408, 1492
AlwI GGATC 4 cut(s) 386, 556, 569, 1399
AlwNI CAGNNNCTG 1 cut(s) 1379
AoxI GGCC 5 cut(s) 64, 301, 794, 995, 1190
ApaI GGGCCC 1 cut(s) 798
ApeKI GCWGC 2 cut(s) 229, 1373
ApoI RAATTY 3 cut(s) 944, 1037, 1144
ArsI GACNNNNNNTTYG 2 cut(s) 191, 223
Asp718I GGTACC 1 cut(s) 465
AspS9I GGNCC 5 cut(s) 165, 302, 767, 794, 795
AsuHPI GGTGA 2 cut(s) 331, 1025
AsuNHI GCTAGC 1 cut(s) 1099
AvaII GGWCC 2 cut(s) 165, 767
BaeGI GKGCMC 2 cut(s) 798, 1085
BamHI GGATCC 1 cut(s) 561
BanI GGYRCC 2 cut(s) 465, 1080
BanII GRGCYC 1 cut(s) 798
BbsI GAAGAC 1 cut(s) 849
BbvI GCAGC 2 cut(s) 216, 1385
BccI CCATC 5 cut(s) 218, 290, 514, 527, 1117
BceAI ACGGC 2 cut(s) 493, 1206
BciT130I CCWGG 4 cut(s) 18, 109, 423, 567
BcoDI GTCTC 2 cut(s) 1408, 1492
BfaI CTAG 3 cut(s) 299, 600, 1100
BfuAI ACCTGC 1 cut(s) 477
BglII AGATCT 2 cut(s) 650, 1493
BisI GCNGC 2 cut(s) 230, 1374
BlsI GCNGC 2 cut(s) 231, 1375
BmcAI AGTACT 1 cut(s) 1476
Bme1390I CCNGG 4 cut(s) 18, 109, 423, 567
Bme18I GGWCC 2 cut(s) 165, 767
BmgT120I GGNCC 5 cut(s) 165, 302, 767, 794, 795
BmiI GGNNCC 5 cut(s) 22, 467, 563, 796, 1082
BmrFI CCNGG 4 cut(s) 18, 109, 423, 567
BmrI ACTGGG 2 cut(s) 422, 1466
BmsI GCATC 3 cut(s) 72, 238, 864
BmtI GCTAGC 1 cut(s) 1103
BmuI ACTGGG 2 cut(s) 422, 1466
BpiI GAAGAC 1 cut(s) 849
BpmI CTGGAG 2 cut(s) 91, 1407
Bpu10I CCTNAGC 3 cut(s) 405, 821, 826
BpuEI CTTGAG 3 cut(s) 572, 667, 1474
BsaJI CCNNGG 3 cut(s) 108, 422, 565
BsaWI WCCGGW 2 cut(s) 162, 196
BsaXI ACNNNNNCTCC 4 cut(s) 1164, 1194, 1450, 1480
Bsc4I CCNNNNNNNGG 3 cut(s) 62, 310, 1115
Bse118I RCCGGY 1 cut(s) 150
Bse1I ACTGG 3 cut(s) 417, 1390, 1472
Bse3DI GCAATG 2 cut(s) 1285, 1438
BseBI CCWGG 4 cut(s) 18, 109, 423, 567
BseDI CCNNGG 3 cut(s) 108, 422, 565
BseGI GGATG 3 cut(s) 506, 594, 1105
BseLI CCNNNNNNNGG 3 cut(s) 62, 310, 1115
BseMI GCAATG 2 cut(s) 1285, 1438
BseMII CTCAG 3 cut(s) 129, 750, 840
BseNI ACTGG 3 cut(s) 417, 1390, 1472
BseRI GAGGAG 1 cut(s) 1061
BseSI GKGCMC 2 cut(s) 798, 1085
BseXI GCAGC 2 cut(s) 216, 1385
BseYI CCCAGC 1 cut(s) 55
Bsh1236I CGCG 1 cut(s) 212
BshFI GGCC 5 cut(s) 66, 303, 796, 997, 1192
BshNI GGYRCC 2 cut(s) 465, 1080
BsiSI CCGG 3 cut(s) 151, 163, 197
BslFI GGGAC 4 cut(s) 32, 204, 802, 969
BslI CCNNNNNNNGG 3 cut(s) 62, 310, 1115
BsmAI GTCTC 2 cut(s) 1408, 1492
BsmFI GGGAC 4 cut(s) 32, 204, 802, 969
BsnI GGCC 5 cut(s) 66, 303, 796, 997, 1192
Bsp120I GGGCCC 1 cut(s) 794
Bsp1286I GDGCHC 2 cut(s) 798, 1085
Bsp143I GATC 5 cut(s) 378, 561, 650, 1391, 1493
Bsp68I TCGCGA 1 cut(s) 212
BspANI GGCC 5 cut(s) 66, 303, 796, 997, 1192
BspCNI CTCAG 3 cut(s) 130, 749, 839
BspFNI CGCG 1 cut(s) 212
BspLI GGNNCC 5 cut(s) 22, 467, 563, 796, 1082
BspMI ACCTGC 1 cut(s) 477
BspOI GCTAGC 1 cut(s) 1103
BspPI GGATC 4 cut(s) 386, 556, 569, 1399
BspT107I GGYRCC 2 cut(s) 465, 1080
BsrDI GCAATG 2 cut(s) 1285, 1438
BsrFI RCCGGY 1 cut(s) 150
BsrI ACTGG 3 cut(s) 417, 1390, 1472
BssAI RCCGGY 1 cut(s) 150
BssECI CCNNGG 3 cut(s) 108, 422, 565
BssMI GATC 5 cut(s) 378, 561, 650, 1391, 1493
Bst2UI CCWGG 4 cut(s) 18, 109, 423, 567
BstC8I GCNNGC 3 cut(s) 971, 1101, 1190
BstDEI CTNAG 6 cut(s) 138, 405, 736, 821, 826, 1454
BstF5I GGATG 3 cut(s) 506, 594, 1105
BstFNI CGCG 1 cut(s) 212
BstKTI GATC 5 cut(s) 381, 564, 653, 1394, 1496
BstMAI GTCTC 2 cut(s) 1408, 1492
BstMBI GATC 5 cut(s) 378, 561, 650, 1391, 1493
BstMWI GCNNNNNNNGC 2 cut(s) 787, 1373
BstNI CCWGG 4 cut(s) 18, 109, 423, 567
BstNSI RCATGY 1 cut(s) 297
BstSCI CCNGG 4 cut(s) 16, 107, 421, 565
BstSLI GKGCMC 2 cut(s) 798, 1085
BstUI CGCG 1 cut(s) 212
BstV1I GCAGC 2 cut(s) 216, 1385
BstV2I GAAGAC 1 cut(s) 849
BstX2I RGATCY 3 cut(s) 561, 650, 1493
BstXI CCANNNNNNTGG 1 cut(s) 558
BstYI RGATCY 3 cut(s) 561, 650, 1493
BsuRI GGCC 5 cut(s) 66, 303, 796, 997, 1192
BtsCI GGATG 3 cut(s) 506, 594, 1105
BtsI GCAGTG 1 cut(s) 664
BtsIMutI CAGTG 2 cut(s) 664, 1383
BtuMI TCGCGA 1 cut(s) 212
BveI ACCTGC 1 cut(s) 477
Cac8I GCNNGC 3 cut(s) 971, 1101, 1190
CaiI CAGNNNCTG 1 cut(s) 1379
Cfr10I RCCGGY 1 cut(s) 150
Cfr13I GGNCC 5 cut(s) 165, 302, 767, 794, 795
CseI GACGC 1 cut(s) 854
Csp6I GTAC 7 cut(s) 103, 466, 537, 1181, 1233, 1399, 1475
CspCI CAANNNNNGTGG 2 cut(s) 759, 794
CviQI GTAC 7 cut(s) 103, 466, 537, 1181, 1233, 1399, 1475
DdeI CTNAG 6 cut(s) 138, 405, 736, 821, 826, 1454
DpnI GATC 5 cut(s) 380, 563, 652, 1393, 1495
DpnII GATC 5 cut(s) 378, 561, 650, 1391, 1493
Eco147I AGGCCT 1 cut(s) 997
Eco24I GRGCYC 1 cut(s) 798
Eco47I GGWCC 2 cut(s) 165, 767
Eco57I CTGAAG 2 cut(s) 363, 675
EcoO109I RGGNCCY 1 cut(s) 302
EcoRI GAATTC 1 cut(s) 1144
EcoRII CCWGG 4 cut(s) 16, 107, 421, 565
EcoT22I ATGCAT 1 cut(s) 857
EcoT38I GRGCYC 1 cut(s) 798
FaqI GGGAC 4 cut(s) 32, 204, 802, 969
Fnu4HI GCNGC 2 cut(s) 230, 1374
FokI GGATG 3 cut(s) 493, 581, 1092
FriOI GRGCYC 1 cut(s) 798
Fsp4HI GCNGC 2 cut(s) 230, 1374
FspBI CTAG 3 cut(s) 299, 600, 1100
GluI GCNGC 2 cut(s) 230, 1374
GsaI CCCAGC 1 cut(s) 59
GsuI CTGGAG 2 cut(s) 91, 1407
HaeIII GGCC 5 cut(s) 66, 303, 796, 997, 1192
HapII CCGG 3 cut(s) 151, 163, 197
HgaI GACGC 1 cut(s) 854
HincII GTYRAC 2 cut(s) 73, 133
HindII GTYRAC 2 cut(s) 73, 133
HindIII AAGCTT 1 cut(s) 95
HinfI GANTC 8 cut(s) 114, 179, 278, 418, 612, 884, 1016, 1450
HpaI GTTAAC 1 cut(s) 73
HpaII CCGG 3 cut(s) 151, 163, 197
HphI GGTGA 2 cut(s) 331, 1025
Hpy166II GTNNAC 6 cut(s) 73, 133, 539, 770, 1233, 1261
Hpy188I TCNGA 9 cut(s) 139, 178, 343, 373, 611, 655, 1168, 1204, 1505
Hpy188III TCNNGA 3 cut(s) 211, 286, 1491
Hpy8I GTNNAC 6 cut(s) 73, 133, 539, 770, 1233, 1261
HpyAV CCTTC 2 cut(s) 246, 1307
HpyCH4IV ACGT 1 cut(s) 698
HpyF10VI GCNNNNNNNGC 2 cut(s) 787, 1373
HpyF3I CTNAG 6 cut(s) 138, 405, 736, 821, 826, 1454
HpySE526I ACGT 1 cut(s) 698
KpnI GGTACC 1 cut(s) 469
KspAI GTTAAC 1 cut(s) 73
Kzo9I GATC 5 cut(s) 378, 561, 650, 1391, 1493
LmnI GCTCC 5 cut(s) 20, 313, 712, 909, 1090
Lsp1109I GCAGC 2 cut(s) 216, 1385
LweI GCATC 3 cut(s) 72, 238, 864
MaeI CTAG 3 cut(s) 299, 600, 1100
MaeII ACGT 1 cut(s) 698
MaeIII GTNAC 3 cut(s) 319, 613, 1069
MalI GATC 5 cut(s) 380, 563, 652, 1393, 1495
MboI GATC 5 cut(s) 378, 561, 650, 1391, 1493
MboII GAAGA 6 cut(s) 435, 682, 854, 1342, 1369, 1372
MfeI CAATTG 1 cut(s) 552
MflI RGATCY 3 cut(s) 561, 650, 1493
MhlI GDGCHC 2 cut(s) 798, 1085
MlyI GAGTC 3 cut(s) 173, 272, 621
MmeI TCCRAC 2 cut(s) 290, 1121
Mph1103I ATGCAT 1 cut(s) 857
MseI TTAA 6 cut(s) 72, 158, 725, 1272, 1299, 1422
MslI CAYNNNNRTG 2 cut(s) 917, 1331
MspI CCGG 3 cut(s) 151, 163, 197
MspR9I CCNGG 4 cut(s) 18, 109, 423, 567
MunI CAATTG 1 cut(s) 552
MvaI CCWGG 4 cut(s) 18, 109, 423, 567
MvnI CGCG 1 cut(s) 212
MwoI GCNNNNNNNGC 2 cut(s) 787, 1373
NdeII GATC 5 cut(s) 378, 561, 650, 1391, 1493
NheI GCTAGC 1 cut(s) 1099
NlaIV GGNNCC 5 cut(s) 22, 467, 563, 796, 1082
NmuCI GTSAC 2 cut(s) 319, 613
NruI TCGCGA 1 cut(s) 212
NsiI ATGCAT 1 cut(s) 857
NspI RCATGY 1 cut(s) 297
PceI AGGCCT 1 cut(s) 997
PciI ACATGT 1 cut(s) 293
PcsI WCGNNNNNNNCGW 1 cut(s) 483
PfeI GAWTC 5 cut(s) 114, 418, 884, 1016, 1450
PflFI GACNNNGTC 1 cut(s) 182
PflMI CCANNNNNTGG 1 cut(s) 1115
PkrI GCNGC 2 cut(s) 231, 1375
PleI GAGTC 3 cut(s) 173, 272, 620
PpsI GAGTC 3 cut(s) 173, 272, 620
PscI ACATGT 1 cut(s) 293
Psp6I CCWGG 4 cut(s) 16, 107, 421, 565
PspFI CCCAGC 1 cut(s) 55
PspGI CCWGG 4 cut(s) 16, 107, 421, 565
PspN4I GGNNCC 5 cut(s) 22, 467, 563, 796, 1082
PspOMI GGGCCC 1 cut(s) 794
PspPI GGNCC 5 cut(s) 165, 302, 767, 794, 795
PstNI CAGNNNCTG 1 cut(s) 1379
PsuI RGATCY 3 cut(s) 561, 650, 1493
PsyI GACNNNGTC 1 cut(s) 182
RruI TCGCGA 1 cut(s) 212
RsaI GTAC 7 cut(s) 104, 467, 538, 1182, 1234, 1400, 1476
RsaNI GTAC 7 cut(s) 103, 466, 537, 1181, 1233, 1399, 1475
RseI CAYNNNNRTG 2 cut(s) 917, 1331
SaqAI TTAA 6 cut(s) 72, 158, 725, 1272, 1299, 1422
SatI GCNGC 2 cut(s) 230, 1374
Sau3AI GATC 5 cut(s) 378, 561, 650, 1391, 1493
Sau96I GGNCC 5 cut(s) 165, 302, 767, 794, 795
ScaI AGTACT 1 cut(s) 1476
SchI GAGTC 3 cut(s) 173, 272, 621
ScrFI CCNGG 4 cut(s) 18, 109, 423, 567
SduI GDGCHC 2 cut(s) 798, 1085
SfaNI GCATC 3 cut(s) 72, 238, 864
SgrAI CRCCGGYG 1 cut(s) 150
SinI GGWCC 2 cut(s) 165, 767
SmiMI CAYNNNNRTG 2 cut(s) 917, 1331
SmlI CTYRAG 3 cut(s) 587, 646, 1489
SmoI CTYRAG 3 cut(s) 587, 646, 1489
SseBI AGGCCT 1 cut(s) 997
SspMI CTAG 3 cut(s) 299, 600, 1100
StuI AGGCCT 1 cut(s) 997
StyD4I CCNGG 4 cut(s) 16, 107, 421, 565
TaiI ACGT 1 cut(s) 701
TaqI TCGA 3 cut(s) 543, 639, 858
TatI WGTACW 4 cut(s) 102, 1180, 1232, 1474
TfiI GAWTC 5 cut(s) 114, 418, 884, 1016, 1450
Tru1I TTAA 6 cut(s) 72, 158, 725, 1272, 1299, 1422
Tru9I TTAA 6 cut(s) 72, 158, 725, 1272, 1299, 1422
TscAI CASTG 2 cut(s) 671, 1390
TseFI GTSAC 2 cut(s) 319, 613
TseI GCWGC 2 cut(s) 229, 1373
Tsp45I GTSAC 2 cut(s) 319, 613
TspDTI ATGAA 5 cut(s) 448, 514, 531, 732, 1343
TspGWI ACGGA 2 cut(s) 172, 1187
TspRI CASTG 2 cut(s) 671, 1390
Tth111I GACNNNGTC 1 cut(s) 182
Van91I CCANNNNNTGG 1 cut(s) 1115
VpaK11BI GGWCC 2 cut(s) 165, 767
XapI RAATTY 3 cut(s) 944, 1037, 1144
XceI RCATGY 1 cut(s) 297
XspI CTAG 3 cut(s) 299, 600, 1100
ZrmI AGTACT 1 cut(s) 1476
Zsp2I ATGCAT 1 cut(s) 857
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.