MD02G1272000.v1.1

Angio-associated migratory cell

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0001404
Physical Location & Seq
Reverse (-)
32643356 .. 32647770
4415 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1272000.v1.1.491

Sequence Viewer

Length: 1173 bp
ATGAACAATCCAGCTCATGATTTTCATGAAGAAGAAGATGACCAGGGGGACATATTTCTTGATGAAGATGACATAATCCGCGAATCCGCTGTTGATGACGAAGATCTTCCTGATGCAGATGATCAAAGTGTTGATGAGCCTGATGACGATGACTCCGTGCACACGTTTACTGGCCATACGGGTGAGCTTTACACAGTTGTCTGCAGCCCAACTGATCCTACTTTTGTTGCAACCGGTGGTGGAGATGACAGAGGGTTTCTTTGGAGAATTGGAGTAGGAGATTTTGCTTTTGAGCTCCAAGGTCATAAGGATTCTGTTTCTAGTTTATCATATAGTACTGATGGGAAGTTGCTTGCATCCGGAAGCTTAGATGGAACTATTCAAATTTGGGATGTAGCGTACGGAGTTGGAAAAATAACTCTTGAAGGTCCTGGAGGGGGCATTGAGTGGGTCAGGTGGCATCCTAGGGGGCATCTGGTTCTGGCTGGTTCAGAGGACTGCACTGTGTGGATGTGGAATGCTGACAGTGGGTCCTATCTTAATATGTTTTCAGGCCATGGTAGTAACGTGAGCTGTGGTGATTTTACCCCTGATGGTAAAACAATATGCACTGGTTCTGCTGATGCAACTTTGAGGATATGGAATCCAAAAAGTGGCGAAAACATTCATGTCATTCAAGGTCACCCATACCATACTGCTGGATTAACATGTTTGGCAATAAGCTCTGATTCAACTCTAGCTTATACTGGTGCTGAAGATGGTTCTATCCGTATCGTCAACATAACTACCGGAAAGGTTGTTAATTCCCTGGCTTCACATTCAGATTCTGTCGAATGCATCGGGCTTGCACCAAGCTCCCCTTGGGCCGCAACAGGAGGTATGGATAAGAAGCTTGTTATCTGGGACTTGCCTTCTTCATCGGCCCGTGCTACATGTGAACATGAGGATGGAGTGACATGCTTGACATGGCTTGGTCAATCAAATTACCTAGCAACAGGTTGTGGGGATGGAAAGGTTCGAGTCTGGGACAGTCGCTCTGGGGATTGTGTTAGAACCTTCAGCGGCCACACCGAAACCATTCAGTCTCTTTCCGTTTCTGCCAACCAAGAGTTTCTTGTTTCAGTATCTACTGACGGAACTGCCCGAGTTTTTGAGATTGCAGAATATAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

391

Amino Acids

41.72

Weight (kDa)

4.33

Isoelectric Point (pI)

36.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR5 PF25175 48 - 135 1.1e-14 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 51 - 215 3.4e-31 WDR3 first beta-propeller domain
Beta-prop_WDR36-Utp21_1st PF25171 52 - 175 7.2e-06 WDR36/Utp21 first beta-propeller
WD40_Gbeta PF25391 56 - 183 3.6e-14 G protein beta WD-40 repeat protein
WD40_WDHD1_1st PF24817 65 - 133 6.6e-08 WDHD1 first WD40 domain
WD40_Prp19 PF24814 66 - 228 6.4e-25 Prp19 WD40 domain
WDR55 PF24796 70 - 245 7.5e-11 WDR55
NBCH_WD40 PF20426 76 - 133 5.8e-06 Neurobeachin beta propeller domain
Beta-prop_WDR3_2nd PF25172 95 - 215 8.5e-19 WDR3 second beta-propeller domain
WD40 PF00400 97 - 131 3.9e-11 WD domain, G-beta repeat
Beta-prop_TEP1_2nd PF25047 97 - 191 6.3e-11 TEP-1 second beta-propeller
WD40_CDC20-Fz PF24807 97 - 182 1e-09 CDC20/Fizzy WD40 domain
Beta-prop_WDR5 PF25175 99 - 266 3.4e-39 WDR5 beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 99 - 174 9.6e-09 CAF1B/HIR1 beta-propeller domain
Beta-prop_Aladin PF25460 101 - 174 6.2e-07 Aladin seven-bladed propeller
Beta-prop_THOC3 PF25174 102 - 313 4.2e-39 THOC3 beta-propeller domain
EIF3I PF24805 139 - 226 2.2e-11 EIF3I
Beta-prop_CAF1B_HIR1 PF24105 151 - 225 2e-06 CAF1B/HIR1 beta-propeller domain
WD40_CDC20-Fz PF24807 151 - 350 1.2e-24 CDC20/Fizzy WD40 domain
WD40_WDHD1_1st PF24817 151 - 229 2.8e-08 WDHD1 first WD40 domain
Beta-prop_EML_2 PF23414 153 - 280 2.6e-12 Echinoderm microtubule-associated protein second beta-propeller
WDR55 PF24796 160 - 303 1.3e-10 WDR55
WD40_Gbeta PF25391 166 - 302 6.6e-14 G protein beta WD-40 repeat protein
WD40 PF00400 178 - 215 1.2e-08 WD domain, G-beta repeat
Beta-prop_EML PF23409 183 - 381 6.1e-14 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_TEP1_2nd PF25047 184 - 278 2e-08 TEP-1 second beta-propeller
Beta-prop_SCAP PF24017 202 - 356 1.9e-09 SCAP Beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 202 - 342 1.1e-14 WDR36/Utp21 first beta-propeller
Beta-prop_WDR3_1st PF25173 212 - 386 1.5e-33 WDR3 first beta-propeller domain
WD40 PF00400 220 - 258 6.4e-06 WD domain, G-beta repeat
WD40_Prp19 PF24814 228 - 323 7.5e-12 Prp19 WD40 domain
Beta-prop_WDR5 PF25175 231 - 388 7.8e-31 WDR5 beta-propeller domain
EIF3I PF24805 231 - 388 2.4e-13 EIF3I
WD40_WDHD1_1st PF24817 232 - 307 1.7e-08 WDHD1 first WD40 domain
Beta-prop_WDR3_2nd PF25172 234 - 302 1.2e-07 WDR3 second beta-propeller domain
NBCH_WD40 PF20426 234 - 304 2.6e-07 Neurobeachin beta propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 234 - 387 4.1e-18 WDR36/Utp21 second beta-propeller domain
Beta-prop_HPS5 PF23756 235 - 361 4.6e-07 HPS5 beta-propeller
Beta-prop_ACSF4 PF13570 240 - 385 3e-07 Beta-alanine-activating enzyme, beta-propeller
WD40 PF00400 264 - 302 3.5e-06 WD domain, G-beta repeat
Beta-prop_TEP1_2nd PF25047 268 - 385 6.5e-16 TEP-1 second beta-propeller
WD40_CDC20-Fz PF24807 274 - 387 5.4e-14 CDC20/Fizzy WD40 domain
Beta-prop_EML_2 PF23414 282 - 387 3.9e-14 Echinoderm microtubule-associated protein second beta-propeller
WD40_Gbeta PF25391 283 - 387 9.3e-09 G protein beta WD-40 repeat protein
WD40_Prp19 PF24814 289 - 387 4.7e-17 Prp19 WD40 domain
Beta-prop_WDR90_POC16_2nd PF23393 290 - 388 9.3e-06 WDR90/POC16, second beta-propeller
Beta-prop_WDR3_2nd PF25172 291 - 386 5.6e-13 WDR3 second beta-propeller domain
WDR55 PF24796 295 - 388 2.2e-13 WDR55
ANAPC4_WD40 PF12894 300 - 364 1.6e-06 Anaphase-promoting complex subunit 4 WD40 domain
Beta-prop_DCAF4 PF23761 312 - 386 1.6e-06 DDB1- and CUL4-associated factor 4 beta-propeller domain
WD40 PF00400 313 - 343 7e-08 WD domain, G-beta repeat
Beta-prop_THOC3 PF25174 313 - 387 4e-13 THOC3 beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 314 - 388 6e-07 CAF1B/HIR1 beta-propeller domain
WD40_WDHD1_1st PF24817 318 - 388 4.2e-11 WDHD1 first WD40 domain
WD40_MABP1-WDR62_2nd PF24782 327 - 383 5.2e-09 MABP1/WDR62 second WD40 domain
WD40 PF00400 347 - 384 2.2e-07 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 653
AccII CGCG 1 cut(s) 81
AccIII TCCGGA 1 cut(s) 359
AciI CCGC 4 cut(s) 79, 87, 867, 1062
AclWI GGATC 1 cut(s) 209
AcoI YGGCCR 2 cut(s) 172, 1063
AcsI RAATTY 1 cut(s) 384
AcuI CTGAAG 2 cut(s) 774, 1042
AdeI CACNNNGTG 1 cut(s) 507
AfaI GTAC 2 cut(s) 337, 401
AfiI CCNNNNNNNGG 2 cut(s) 437, 653
AflIII ACRYGT 3 cut(s) 162, 707, 932
AgeI ACCGGT 1 cut(s) 233
AgsI TTSAA 4 cut(s) 383, 425, 677, 732
AhdI GACNNNNNGTC 1 cut(s) 529
AjnI CCWGG 3 cut(s) 42, 430, 807
AluBI AGCT 9 cut(s) 14, 187, 295, 366, 573, 723, 740, 855, 892
AluI AGCT 9 cut(s) 14, 187, 295, 366, 573, 723, 740, 855, 892
Alw21I GWGCWC 2 cut(s) 162, 297
Alw26I GTCTC 1 cut(s) 1089
Alw44I GTGCAC 1 cut(s) 158
AlwI GGATC 1 cut(s) 209
AlwNI CAGNNNCTG 1 cut(s) 827
Ama87I CYCGRG 1 cut(s) 1143
Aor13HI TCCGGA 1 cut(s) 359
AoxI GGCC 5 cut(s) 172, 553, 864, 921, 1063
ApaLI GTGCAC 1 cut(s) 158
ApeKI GCWGC 1 cut(s) 204
ApoI RAATTY 1 cut(s) 384
AsiGI ACCGGT 1 cut(s) 233
Asp700I GAANNNNTTC 3 cut(s) 105, 663, 1077
AspA2I CCTAGG 1 cut(s) 464
AspS9I GGNCC 4 cut(s) 428, 531, 864, 922
AsuHPI GGTGA 3 cut(s) 194, 590, 674
AvaI CYCGRG 1 cut(s) 1143
AvaII GGWCC 2 cut(s) 428, 531
AvrII CCTAGG 1 cut(s) 464
BaeGI GKGCMC 1 cut(s) 162
BalI TGGCCA 1 cut(s) 174
BanII GRGCYC 1 cut(s) 297
Bbv12I GWGCWC 2 cut(s) 162, 297
BbvI GCAGC 1 cut(s) 216
BccI CCATC 6 cut(s) 335, 365, 587, 752, 941, 1001
BciT130I CCWGG 3 cut(s) 44, 432, 809
BclI TGATCA 1 cut(s) 121
BcoDI GTCTC 1 cut(s) 1089
BfaI CTAG 4 cut(s) 321, 465, 737, 989
BfmI CTRYAG 1 cut(s) 202
BglII AGATCT 1 cut(s) 103
BisI GCNGC 3 cut(s) 205, 867, 1063
BlnI CCTAGG 1 cut(s) 464
BlsI GCNGC 3 cut(s) 206, 868, 1064
BmcAI AGTACT 1 cut(s) 337
Bme1390I CCNGG 3 cut(s) 44, 432, 809
Bme18I GGWCC 2 cut(s) 428, 531
BmeRI GACNNNNNGTC 1 cut(s) 529
BmeT110I CYCGRG 1 cut(s) 1143
BmgT120I GGNCC 4 cut(s) 428, 531, 864, 922
BmiI GGNNCC 1 cut(s) 532
BmrFI CCNGG 3 cut(s) 44, 432, 809
BmsI GCATC 6 cut(s) 103, 365, 469, 481, 613, 846
BpmI CTGGAG 1 cut(s) 453
BsaJI CCNNGG 6 cut(s) 43, 298, 464, 556, 807, 860
BsaWI WCCGGW 3 cut(s) 233, 359, 788
BsaXI ACNNNNNCTCC 2 cut(s) 137, 167
Bsc4I CCNNNNNNNGG 2 cut(s) 437, 653
Bse118I RCCGGY 1 cut(s) 233
Bse1I ACTGG 3 cut(s) 175, 616, 751
BseAI TCCGGA 1 cut(s) 359
BseBI CCWGG 3 cut(s) 44, 432, 809
BseDI CCNNGG 6 cut(s) 43, 298, 464, 556, 807, 860
BseGI GGATG 6 cut(s) 356, 397, 460, 516, 952, 1012
BseLI CCNNNNNNNGG 2 cut(s) 437, 653
BseNI ACTGG 3 cut(s) 175, 616, 751
BseSI GKGCMC 1 cut(s) 162
BseXI GCAGC 1 cut(s) 216
BsgI GTGCAG 1 cut(s) 484
Bsh1236I CGCG 1 cut(s) 81
BshFI GGCC 5 cut(s) 174, 555, 866, 923, 1065
BshTI ACCGGT 1 cut(s) 233
BsiHKAI GWGCWC 2 cut(s) 162, 297
BsiHKCI CYCGRG 1 cut(s) 1143
BsiSI CCGG 3 cut(s) 234, 360, 789
BsiWI CGTACG 1 cut(s) 399
BslFI GGGAC 3 cut(s) 62, 917, 1040
BslI CCNNNNNNNGG 2 cut(s) 437, 653
BsmAI GTCTC 1 cut(s) 1089
BsmFI GGGAC 3 cut(s) 62, 917, 1040
BsmI GAATGC 2 cut(s) 523, 839
BsnI GGCC 5 cut(s) 174, 555, 866, 923, 1065
BsoBI CYCGRG 1 cut(s) 1143
Bsp1286I GDGCHC 2 cut(s) 162, 297
Bsp13I TCCGGA 1 cut(s) 359
Bsp143I GATC 3 cut(s) 103, 121, 214
Bsp19I CCATGG 1 cut(s) 556
BspACI CCGC 4 cut(s) 79, 87, 867, 1062
BspANI GGCC 5 cut(s) 174, 555, 866, 923, 1065
BspEI TCCGGA 1 cut(s) 359
BspFNI CGCG 1 cut(s) 81
BspHI TCATGA 2 cut(s) 16, 25
BspLI GGNNCC 1 cut(s) 532
BspMAI CTGCAG 1 cut(s) 206
BspPI GGATC 1 cut(s) 209
BsrFI RCCGGY 1 cut(s) 233
BsrI ACTGG 3 cut(s) 175, 616, 751
BssAI RCCGGY 1 cut(s) 233
BssECI CCNNGG 6 cut(s) 43, 298, 464, 556, 807, 860
BssMI GATC 3 cut(s) 103, 121, 214
BssT1I CCWWGG 4 cut(s) 298, 464, 556, 860
Bst2UI CCWGG 3 cut(s) 44, 432, 809
Bst4CI ACNGT 4 cut(s) 196, 505, 527, 1031
BstC8I GCNNGC 2 cut(s) 354, 846
BstDEI CTNAG 1 cut(s) 367
BstDSI CCRYGG 1 cut(s) 556
BstEII GGTNACC 1 cut(s) 680
BstF5I GGATG 6 cut(s) 356, 397, 460, 516, 952, 1012
BstFNI CGCG 1 cut(s) 81
BstKTI GATC 3 cut(s) 106, 124, 217
BstMAI GTCTC 1 cut(s) 1089
BstMBI GATC 3 cut(s) 103, 121, 214
BstNI CCWGG 3 cut(s) 44, 432, 809
BstNSI RCATGY 3 cut(s) 711, 936, 960
BstPI GGTNACC 1 cut(s) 680
BstSCI CCNGG 3 cut(s) 42, 430, 807
BstSFI CTRYAG 1 cut(s) 202
BstSLI GKGCMC 1 cut(s) 162
BstUI CGCG 1 cut(s) 81
BstV1I GCAGC 1 cut(s) 216
BstX2I RGATCY 1 cut(s) 103
BstXI CCANNNNNNTGG 1 cut(s) 698
BstYI RGATCY 1 cut(s) 103
BsuRI GGCC 5 cut(s) 174, 555, 866, 923, 1065
BtgI CCRYGG 1 cut(s) 556
BtsCI GGATG 6 cut(s) 356, 397, 460, 516, 952, 1012
BtsIMutI CAGTG 3 cut(s) 501, 532, 609
Cac8I GCNNGC 2 cut(s) 354, 846
CaiI CAGNNNCTG 1 cut(s) 827
CciI TCATGA 2 cut(s) 16, 25
Cfr10I RCCGGY 1 cut(s) 233
Cfr13I GGNCC 4 cut(s) 428, 531, 864, 922
Csp6I GTAC 2 cut(s) 336, 400
CspAI ACCGGT 1 cut(s) 233
CviAII CATG 9 cut(s) 17, 26, 557, 668, 708, 933, 941, 957, 966
CviQI GTAC 2 cut(s) 336, 400
DdeI CTNAG 1 cut(s) 367
DpnI GATC 3 cut(s) 105, 123, 216
DpnII GATC 3 cut(s) 103, 121, 214
DraIII CACNNNGTG 1 cut(s) 507
DriI GACNNNNNGTC 1 cut(s) 529
EaeI YGGCCR 2 cut(s) 172, 1063
Eam1105I GACNNNNNGTC 1 cut(s) 529
Ecl136II GAGCTC 1 cut(s) 295
Eco130I CCWWGG 4 cut(s) 298, 464, 556, 860
Eco24I GRGCYC 1 cut(s) 297
Eco47I GGWCC 2 cut(s) 428, 531
Eco53kI GAGCTC 1 cut(s) 295
Eco57I CTGAAG 2 cut(s) 774, 1042
Eco88I CYCGRG 1 cut(s) 1143
Eco91I GGTNACC 1 cut(s) 680
EcoICRI GAGCTC 1 cut(s) 295
EcoO109I RGGNCCY 2 cut(s) 428, 531
EcoO65I GGTNACC 1 cut(s) 680
EcoRII CCWGG 3 cut(s) 42, 430, 807
EcoT14I CCWWGG 4 cut(s) 298, 464, 556, 860
EcoT22I ATGCAT 1 cut(s) 839
EcoT38I GRGCYC 1 cut(s) 297
ErhI CCWWGG 4 cut(s) 298, 464, 556, 860
FaeI CATG 9 cut(s) 20, 29, 560, 671, 711, 936, 944, 960, 969
FalI AAGNNNNNCTT 4 cut(s) 844, 876, 1098, 1130
FaqI GGGAC 3 cut(s) 62, 917, 1040
FatI CATG 9 cut(s) 16, 25, 556, 667, 707, 932, 940, 956, 965
FbaI TGATCA 1 cut(s) 121
Fnu4HI GCNGC 3 cut(s) 205, 867, 1063
FokI GGATG 6 cut(s) 343, 404, 447, 523, 959, 1019
FriOI GRGCYC 1 cut(s) 297
Fsp4HI GCNGC 3 cut(s) 205, 867, 1063
FspBI CTAG 4 cut(s) 321, 465, 737, 989
GluI GCNGC 3 cut(s) 205, 867, 1063
GsuI CTGGAG 1 cut(s) 453
HaeIII GGCC 5 cut(s) 174, 555, 866, 923, 1065
HapII CCGG 3 cut(s) 234, 360, 789
Hin1II CATG 9 cut(s) 20, 29, 560, 671, 711, 936, 944, 960, 969
HincII GTYRAC 1 cut(s) 778
HindII GTYRAC 1 cut(s) 778
HindIII AAGCTT 2 cut(s) 364, 890
HinfI GANTC 7 cut(s) 83, 152, 311, 643, 728, 824, 1020
HpaII CCGG 3 cut(s) 234, 360, 789
HphI GGTGA 3 cut(s) 194, 590, 674
Hpy166II GTNNAC 4 cut(s) 160, 168, 778, 938
Hpy188I TCNGA 3 cut(s) 493, 727, 823
Hpy188III TCNNGA 6 cut(s) 17, 26, 59, 110, 360, 422
Hpy8I GTNNAC 4 cut(s) 160, 168, 778, 938
HpyAV CCTTC 3 cut(s) 419, 921, 1066
HpyCH4III ACNGT 4 cut(s) 196, 505, 527, 1031
HpyCH4IV ACGT 2 cut(s) 164, 567
HpyF3I CTNAG 1 cut(s) 367
HpySE526I ACGT 2 cut(s) 164, 567
Hsp92II CATG 9 cut(s) 20, 29, 560, 671, 711, 936, 944, 960, 969
Kpn2I TCCGGA 1 cut(s) 359
Ksp22I TGATCA 1 cut(s) 121
Kzo9I GATC 3 cut(s) 103, 121, 214
LmnI GCTCC 2 cut(s) 300, 860
Lsp1109I GCAGC 1 cut(s) 216
LweI GCATC 6 cut(s) 103, 365, 469, 481, 613, 846
MaeI CTAG 4 cut(s) 321, 465, 737, 989
MaeII ACGT 2 cut(s) 164, 567
MaeIII GTNAC 3 cut(s) 563, 680, 952
MalI GATC 3 cut(s) 105, 123, 216
MboI GATC 3 cut(s) 103, 121, 214
MboII GAAGA 8 cut(s) 41, 44, 47, 77, 98, 113, 767, 906
MflI RGATCY 1 cut(s) 103
MhlI GDGCHC 2 cut(s) 162, 297
MlsI TGGCCA 1 cut(s) 174
MluCI AATT 4 cut(s) 267, 384, 802, 982
MluNI TGGCCA 1 cut(s) 174
MlyI GAGTC 2 cut(s) 146, 1029
MmeI TCCRAC 1 cut(s) 388
MnlI CCTC 6 cut(s) 245, 428, 487, 627, 869, 937
Mox20I TGGCCA 1 cut(s) 174
Mph1103I ATGCAT 1 cut(s) 839
MroI TCCGGA 1 cut(s) 359
MroXI GAANNNNTTC 3 cut(s) 105, 663, 1077
MscI TGGCCA 1 cut(s) 174
MseI TTAA 3 cut(s) 540, 704, 801
MslI CAYNNNNRTG 2 cut(s) 180, 945
Msp20I TGGCCA 1 cut(s) 174
MspA1I CMGCKG 2 cut(s) 89, 1062
MspI CCGG 3 cut(s) 234, 360, 789
MspR9I CCNGG 3 cut(s) 44, 432, 809
Mva1269I GAATGC 2 cut(s) 523, 839
MvaI CCWGG 3 cut(s) 44, 432, 809
MvnI CGCG 1 cut(s) 81
NcoI CCATGG 1 cut(s) 556
NdeII GATC 3 cut(s) 103, 121, 214
NlaIII CATG 9 cut(s) 20, 29, 560, 671, 711, 936, 944, 960, 969
NlaIV GGNNCC 1 cut(s) 532
NmuCI GTSAC 2 cut(s) 680, 952
NsiI ATGCAT 1 cut(s) 839
NspI RCATGY 3 cut(s) 711, 936, 960
PagI TCATGA 2 cut(s) 16, 25
PciI ACATGT 2 cut(s) 707, 932
PcsI WCGNNNNNNNCGW 1 cut(s) 153
PctI GAATGC 2 cut(s) 523, 839
PdmI GAANNNNTTC 3 cut(s) 105, 663, 1077
PfeI GAWTC 5 cut(s) 83, 311, 643, 728, 824
Pfl23II CGTACG 1 cut(s) 399
PflMI CCANNNNNTGG 1 cut(s) 653
PfoI TCCNGGA 1 cut(s) 430
PinAI ACCGGT 1 cut(s) 233
PkrI GCNGC 3 cut(s) 206, 868, 1064
PleI GAGTC 2 cut(s) 146, 1028
PpsI GAGTC 2 cut(s) 146, 1028
PpuMI RGGWCCY 2 cut(s) 428, 531
PscI ACATGT 2 cut(s) 707, 932
Psp124BI GAGCTC 1 cut(s) 297
Psp5II RGGWCCY 2 cut(s) 428, 531
Psp6I CCWGG 3 cut(s) 42, 430, 807
PspEI GGTNACC 1 cut(s) 680
PspGI CCWGG 3 cut(s) 42, 430, 807
PspLI CGTACG 1 cut(s) 399
PspN4I GGNNCC 1 cut(s) 532
PspPI GGNCC 4 cut(s) 428, 531, 864, 922
PspPPI RGGWCCY 2 cut(s) 428, 531
PstI CTGCAG 1 cut(s) 206
PstNI CAGNNNCTG 1 cut(s) 827
PsuI RGATCY 1 cut(s) 103
RsaI GTAC 2 cut(s) 337, 401
RsaNI GTAC 2 cut(s) 336, 400
RseI CAYNNNNRTG 2 cut(s) 180, 945
SacI GAGCTC 1 cut(s) 297
SaqAI TTAA 3 cut(s) 540, 704, 801
SatI GCNGC 3 cut(s) 205, 867, 1063
Sau3AI GATC 3 cut(s) 103, 121, 214
Sau96I GGNCC 4 cut(s) 428, 531, 864, 922
ScaI AGTACT 1 cut(s) 337
SchI GAGTC 2 cut(s) 146, 1029
ScrFI CCNGG 3 cut(s) 44, 432, 809
SduI GDGCHC 2 cut(s) 162, 297
SfaNI GCATC 6 cut(s) 103, 365, 469, 481, 613, 846
SfcI CTRYAG 1 cut(s) 202
SinI GGWCC 2 cut(s) 428, 531
SmiMI CAYNNNNRTG 2 cut(s) 180, 945
Sse9I AATT 4 cut(s) 267, 384, 802, 982
SsiI CCGC 4 cut(s) 79, 87, 867, 1062
SspMI CTAG 4 cut(s) 321, 465, 737, 989
SstI GAGCTC 1 cut(s) 297
StyD4I CCNGG 3 cut(s) 42, 430, 807
StyI CCWWGG 4 cut(s) 298, 464, 556, 860
TaaI ACNGT 4 cut(s) 196, 505, 527, 1031
TaiI ACGT 2 cut(s) 167, 570
TaqI TCGA 2 cut(s) 831, 1018
TasI AATT 4 cut(s) 267, 384, 802, 982
TatI WGTACW 1 cut(s) 335
TauI GCSGC 2 cut(s) 869, 1065
TfiI GAWTC 5 cut(s) 83, 311, 643, 728, 824
Tru1I TTAA 3 cut(s) 540, 704, 801
Tru9I TTAA 3 cut(s) 540, 704, 801
TscAI CASTG 3 cut(s) 508, 532, 616
TseFI GTSAC 2 cut(s) 680, 952
TseI GCWGC 1 cut(s) 204
Tsp45I GTSAC 2 cut(s) 680, 952
TspDTI ATGAA 6 cut(s) 14, 17, 42, 78, 656, 906
TspGWI ACGGA 5 cut(s) 145, 417, 758, 1081, 1149
TspRI CASTG 3 cut(s) 508, 532, 616
Van91I CCANNNNNTGG 1 cut(s) 653
VneI GTGCAC 1 cut(s) 158
VpaK11BI GGWCC 2 cut(s) 428, 531
XapI RAATTY 1 cut(s) 384
XceI RCATGY 3 cut(s) 711, 936, 960
XcmI CCANNNNNNNNNTGG 1 cut(s) 858
XmaJI CCTAGG 1 cut(s) 464
XmnI GAANNNNTTC 3 cut(s) 105, 663, 1077
XspI CTAG 4 cut(s) 321, 465, 737, 989
ZrmI AGTACT 1 cut(s) 337
Zsp2I ATGCAT 1 cut(s) 839
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.