Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001067

Physical Location & Seq

Genomic Coordinates Reverse (-)

9426109 .. 9431219

Gene Structure 5111 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0070800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGGCTTCCCTCTCATTTGGGGCCCATATGCCCCAGTCCCACCACCAATTCAAGAAAAGCTCGCGGCGGTTTCTCTCTCAGACCCAAAGCTTAGCTCCTTTTGGTTCGTCTTTGCGTGGATTCAGAGGCCCAAGATTGCTGGGCAATGGAATGTTGGTCAGAGCTGAAGAGAAAGCCAGAGGTTCGGGTCAGCTGCCCAAAGCTCAGTCCCAGTCTGAGAAAGAGTTGCAGGAGTTGACACCAAGTTCTGGATCATGTGATCCTTTATGTTCGGTTGACGAAACAAGTTCAAGTGATTTTGAGGCCAGTTACAAGCCAAAGACTGATTTGCTGAAAGCTATAGCAATATTTGCGGCAGCTGCAGCAGGGACAGTGGCAATTAACCACTCATGGGTTGCTGCTAATCAGGATGTTGCCATGACACTGCTATTTGGAATAGGATATGCGGGCATTATTTTTGAAGAATCTCTGGCATTCAACAAGAGTGGAGTAGGTTTGATAATGGCTGTATGCTTGTGGATAGTGAGAAGTATTGGTGCTCCTTCAACTGATATAGCTGTTGCAGAGTTACAACATGCATCTGCTGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGTGCAATGACAATTGTAGAGATAGTTGATTCTCATCAAGGATTTAAGCTGGTCACTGACAATATAACTACTCGAAAGCCAAGAACACTCCTCTGGGTGGTTGGTTTTGTGACTTTCTTCCTTAGTTCAATTCTTGACAACCTGACGTCTACCATTGTCATGGTCTCTTTATTGCGAAAACTAGTGCCTCCCTCAGACTTCCGGAAGCTTTTAGGAGGAGTTGTTGTCATAGCTGCAAATGCTGGTGGTGCGTGGACTCCTATTGGTGATGTTACCACCACTATGTTATGGATACATGGTCAGATATCAACAGTGGAGACAATGAAGGGATTATTTATACCATCAGTCGTTTCTCTTGCTGTTCCGCTGGCACTTTTGTCCCTTACAAGTGAAGCAAGTGGTGATGGACCAGACACATCCAATGTTATGGCATCTGAACAGATGGCTCCCCGGGGACAGCTTGTTTTCTCTGTAGGCATCGGAGCTTTGATTTTTGTTCCGGTTTTCAAGTCCCTAACTGGTTTGCCTCCTTACATGGGTATGCTGCTGGGACTTGGAGTCCTTTGGATTCTGACTGATGCAATCCACTATGGTGAATCGGAAAGACAAAGGTTGAAAGTACCACAGGCTTTGTCACGGATTGACACTCAAGGAGCACTTTTCTTCCTTGGAATTCTTTTATCTGTTAGCAGCCTGGAGGCGGCAGGAATTCTTCGGGAATTAGCAAACTACCTGGATGCTCATATTCCCAATATTGAACTGATTGCAAGTTCAATAGGAATTGTCTCAGCAATTATAGACAATGTTCCACTGGTTGCTGCAGCTATGGGGATGTACGATGTCGCCTCTTTTCCCCAGGACTCTGAGTTTTGGCAGCTGGTTGCATATTGTGCTGGTACTGGTGGATCCATGCTTGTTATTGGTTCTGCAGCCGGAGTTGCTTTTATGGGGATGGAAAAGGTGGACTTCTTCTGGTACTTTCGCAAGGTGAGTGGGTTTGCTTTTGCGGGTTATGCTGCTGGTATTGCAGCCTATTTAGCAGCTCAAAACCTCCACATCTCGATACCAACAACCGTAGCTCAGGTTCCTTTCCTTTCTGGATCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006629 GO:0006643 GO:0006665 GO:0006666 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009987 GO:0012505 GO:0016020 GO:0016491 GO:0016614 GO:0016616 GO:0030148 GO:0031984 GO:0042175 GO:0042180 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044421 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046467 GO:0046519 GO:0047560 GO:0055114 GO:0071704 GO:0097164 GO:0098827 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00600 ko01100 map00600 map01100

Pfam Domains

Protein Families

adh_short

Protein Analysis

573

Amino Acids

60.83

Weight (kDa)

5.83

Isoelectric Point (pI)

38.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CitMHS	PF03600	149 - 489	1.1e-24	Citrate transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001067)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06060 AT3G06060 AT5G19200
fragaria_vesca	FvH4_4g14820
malus_domestica	MD13G1185700.v1.1
prunus_persica	Prupe.6G171900_v2.0.a1 Prupe.6G197600_v2.0.a1 Prupe.6G197600_v2.0.a1 Prupe.6G197600_v2.0.a1
pyrus_communis	pycom13g16020 pycom16g15630
rosa_chinensis	RchiOBHm_Chr4g0417501 RchiOBHm_Chr6g0272751 RchiOBHm_Chr6g0272831 RchiOBHm_Chr6g0272851 RchiOBHm_Chr6g0272861 RchiOBHm_Chr6g0272881
rosa_laevigata	RLG00000007902 RLG00000007903 RLG00000007908 RLG00000007909 RLG00000013658 RLG00000013659 RLG00000023098
rosa_multiflora	Rmu_co8170416.1_g000001 Rmu_co8391473.1_g000001 Rmu_sc0002793.1_g000014 Rmu_sc0004142.1_g000014 Rmu_sc0004142.1_g000018 Rmu_sc0004540.1_g000023 Rmu_ssc0000024.1_g000001
rosa_roxburghii	Rroxscaffold_7G00195980 Rroxscaffold_7G00196010 Rroxscaffold_7G00196020
rosa_rugosa	Rorug04G0148100 Rorug04G0148100 Rorug04G0148200 Rorug04G0148300 Rorug04G0148400 Rorug06G0070800
rosa_samantha	Rh4AG211400 Rh4BG211600 Rh4CG222100 Rh4DG209100 Rh6AG186800 Rh6BG190200 Rh6CG189000 Rh6CG189300 Rh6CG189600 Rh6DG180400 Rh6DG180700 Rh6DG180800 Rh6DG180900 Rh7AG364400 Rh7DG358900
rosa_wichuraiana	Rw4G017870 Rw6G016120 Rw6G016130 Rw6G016150 Rw7G030890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	764
AccB7I	CCANNNNNTGG	1 cut(s)	248
AccI	GTMKAC	1 cut(s)	764
AccII	CGCG	1 cut(s)	64
AccIII	TCCGGA	1 cut(s)	816
AciI	CCGC	7 cut(s)	64, 67, 353, 446, 980, 1316, 1622
AclWI	GGATC	5 cut(s)	254, 259, 1515, 1528, 1710
AcsI	RAATTY	2 cut(s)	1287, 1323
AcuI	CTGAAG	2 cut(s)	186, 606
AcyI	GRCGYC	1 cut(s)	761
AfaI	GTAC	4 cut(s)	1236, 1451, 1513, 1592
AfiI	CCNNNNNNNGG	5 cut(s)	248, 391, 712, 1151, 1315
AhdI	GACNNNNNGTC	1 cut(s)	1172
AhlI	ACTAGT	1 cut(s)	796
AjnI	CCWGG	3 cut(s)	1308, 1347, 1470
AleI	CACNNNNGTG	1 cut(s)	1206
Alw21I	GWGCWC	2 cut(s)	541, 1273
Alw26I	GTCTC	3 cut(s)	784, 926, 1405
AlwI	GGATC	5 cut(s)	254, 259, 1515, 1528, 1710
Ama87I	CYCGRG	1 cut(s)	1065
Aor13HI	TCCGGA	1 cut(s)	816
AoxI	GGCC	3 cut(s)	21, 127, 303
ApaI	GGGCCC	1 cut(s)	25
ApoI	RAATTY	2 cut(s)	1287, 1323
AspS9I	GGNCC	4 cut(s)	21, 22, 128, 1022
AsuC2I	CCSGG	2 cut(s)	1066, 1067
AsuHPI	GGTGA	4 cut(s)	893, 1028, 1220, 1615
AvaI	CYCGRG	1 cut(s)	1065
AvaII	GGWCC	1 cut(s)	1022
BaeGI	GKGCMC	1 cut(s)	25
BamHI	GGATCC	2 cut(s)	1520, 1715
BanII	GRGCYC	1 cut(s)	25
Bbv12I	GWGCWC	2 cut(s)	541, 1273
BccI	CCATC	4 cut(s)	964, 1013, 1051, 1561
BciT130I	CCWGG	3 cut(s)	1310, 1349, 1472
BciVI	GTATCC	1 cut(s)	900
BcnI	CCSGG	2 cut(s)	1066, 1067
BcoDI	GTCTC	3 cut(s)	784, 926, 1405
BcuI	ACTAGT	1 cut(s)	796
BfaI	CTAG	1 cut(s)	797
BfmI	CTRYAG	5 cut(s)	339, 360, 1086, 1434, 1542
BfuI	GTATCC	1 cut(s)	900
BlpI	GCTNAGC	1 cut(s)	91
Bme1390I	CCNGG	5 cut(s)	1066, 1067, 1310, 1349, 1472
Bme18I	GGWCC	1 cut(s)	1022
BmeRI	GACNNNNNGTC	1 cut(s)	1172
BmeT110I	CYCGRG	1 cut(s)	1065
BmgT120I	GGNCC	4 cut(s)	21, 22, 128, 1022
BmiI	GGNNCC	6 cut(s)	22, 23, 1062, 1522, 1701, 1717
BmrFI	CCNGG	5 cut(s)	1066, 1067, 1310, 1349, 1472
BmrI	ACTGGG	2 cut(s)	28, 205
BmsI	GCATC	5 cut(s)	587, 1055, 1101, 1183, 1342
BmuI	ACTGGG	2 cut(s)	28, 205
BpmI	CTGGAG	1 cut(s)	1331
Bpu10I	CCTNAGC	1 cut(s)	1695
Bpu1102I	GCTNAGC	1 cut(s)	91
BpuEI	CTTGAG	1 cut(s)	1248
BpuMI	CCSGG	2 cut(s)	1066, 1067
BsaBI	GATNNNNATC	1 cut(s)	648
BsaHI	GRCGYC	1 cut(s)	761
BsaI	GGTCTC	1 cut(s)	784
BsaJI	CCNNGG	5 cut(s)	1064, 1065, 1066, 1282, 1470
BsaWI	WCCGGW	2 cut(s)	816, 1114
BsaXI	ACNNNNNCTCC	4 cut(s)	822, 825, 852, 855
Bsc4I	CCNNNNNNNGG	5 cut(s)	248, 391, 712, 1151, 1315
Bse1I	ACTGG	6 cut(s)	34, 211, 306, 1138, 1431, 1519
Bse3DI	GCAATG	2 cut(s)	151, 627
Bse8I	GATNNNNATC	1 cut(s)	648
BseAI	TCCGGA	1 cut(s)	816
BseBI	CCWGG	3 cut(s)	1310, 1349, 1472
BseDI	CCNNGG	5 cut(s)	1064, 1065, 1066, 1282, 1470
BseGI	GGATG	5 cut(s)	415, 1031, 1357, 1452, 1572
BseJI	GATNNNNATC	1 cut(s)	648
BseLI	CCNNNNNNNGG	5 cut(s)	248, 391, 712, 1151, 1315
BseMI	GCAATG	2 cut(s)	151, 627
BseMII	CTCAG	7 cut(s)	92, 207, 218, 822, 1416, 1470, 1709
BseNI	ACTGG	6 cut(s)	34, 211, 306, 1138, 1431, 1519
BseRI	GAGGAG	2 cut(s)	695, 846
BseSI	GKGCMC	1 cut(s)	25
BseYI	CCCAGC	2 cut(s)	139, 1162
Bsh1236I	CGCG	1 cut(s)	64
BshFI	GGCC	3 cut(s)	23, 129, 305
BsiHKAI	GWGCWC	2 cut(s)	541, 1273
BsiHKCI	CYCGRG	1 cut(s)	1065
BsiSI	CCGG	4 cut(s)	817, 1066, 1115, 1548
BslFI	GGGAC	7 cut(s)	22, 193, 382, 979, 1083, 1111, 1179
BslI	CCNNNNNNNGG	5 cut(s)	248, 391, 712, 1151, 1315
BsmAI	GTCTC	3 cut(s)	784, 926, 1405
BsmFI	GGGAC	7 cut(s)	22, 193, 382, 979, 1083, 1111, 1179
BsmI	GAATGC	1 cut(s)	473
BsnI	GGCC	3 cut(s)	23, 129, 305
Bso31I	GGTCTC	1 cut(s)	784
BsoBI	CYCGRG	1 cut(s)	1065
Bsp120I	GGGCCC	1 cut(s)	21
Bsp1286I	GDGCHC	3 cut(s)	25, 541, 1273
Bsp13I	TCCGGA	1 cut(s)	816
Bsp143I	GATC	4 cut(s)	251, 259, 1520, 1715
Bsp1720I	GCTNAGC	1 cut(s)	91
BspACI	CCGC	7 cut(s)	64, 67, 353, 446, 980, 1316, 1622
BspANI	GGCC	3 cut(s)	23, 129, 305
BspCNI	CTCAG	7 cut(s)	91, 208, 217, 821, 1415, 1471, 1708
BspEI	TCCGGA	1 cut(s)	816
BspFNI	CGCG	1 cut(s)	64
BspLI	GGNNCC	6 cut(s)	22, 23, 1062, 1522, 1701, 1717
BspMAI	CTGCAG	3 cut(s)	364, 1438, 1546
BspPI	GGATC	5 cut(s)	254, 259, 1515, 1528, 1710
BspTNI	GGTCTC	1 cut(s)	784
BsrDI	GCAATG	2 cut(s)	151, 627
BsrI	ACTGG	6 cut(s)	34, 211, 306, 1138, 1431, 1519
BssECI	CCNNGG	5 cut(s)	1064, 1065, 1066, 1282, 1470
BssMI	GATC	4 cut(s)	251, 259, 1520, 1715
BssNI	GRCGYC	1 cut(s)	761
BssT1I	CCWWGG	1 cut(s)	1282
Bst2UI	CCWGG	3 cut(s)	1310, 1349, 1472
Bst4CI	ACNGT	3 cut(s)	373, 928, 1690
Bst6I	CTCTTC	1 cut(s)	162
BstACI	GRCGYC	1 cut(s)	761
BstAPI	GCANNNNNTGC	2 cut(s)	350, 1505
BstC8I	GCNNGC	3 cut(s)	62, 448, 984
BstDEI	CTNAG	9 cut(s)	78, 91, 204, 216, 737, 808, 1402, 1479, 1695
BstF5I	GGATG	5 cut(s)	415, 1031, 1357, 1452, 1572
BstFNI	CGCG	1 cut(s)	64
BstKTI	GATC	4 cut(s)	254, 262, 1523, 1718
BstMAI	GTCTC	3 cut(s)	784, 926, 1405
BstMBI	GATC	4 cut(s)	251, 259, 1520, 1715
BstNI	CCWGG	3 cut(s)	1310, 1349, 1472
BstNSI	RCATGY	1 cut(s)	578
BstSCI	CCNGG	5 cut(s)	1064, 1065, 1308, 1347, 1470
BstSFI	CTRYAG	5 cut(s)	339, 360, 1086, 1434, 1542
BstSLI	GKGCMC	1 cut(s)	25
BstUI	CGCG	1 cut(s)	64
BstX2I	RGATCY	2 cut(s)	1520, 1715
BstXI	CCANNNNNNTGG	2 cut(s)	775, 1042
BstYI	RGATCY	2 cut(s)	1520, 1715
BsuI	GTATCC	1 cut(s)	900
BsuRI	GGCC	3 cut(s)	23, 129, 305
BtsCI	GGATG	5 cut(s)	415, 1031, 1357, 1452, 1572
BtsI	GCAGTG	1 cut(s)	422
BtsIMutI	CAGTG	6 cut(s)	378, 422, 598, 669, 933, 1424
Cac8I	GCNNGC	3 cut(s)	62, 448, 984
Cfr13I	GGNCC	4 cut(s)	21, 22, 128, 1022
Cfr9I	CCCGGG	1 cut(s)	1065
Csp6I	GTAC	4 cut(s)	1235, 1450, 1512, 1591
CspCI	CAANNNNNGTGG	6 cut(s)	466, 501, 1227, 1262, 1588, 1623
CviAII	CATG	8 cut(s)	255, 390, 418, 575, 775, 911, 1150, 1525
CviQI	GTAC	4 cut(s)	1235, 1450, 1512, 1591
DdeI	CTNAG	9 cut(s)	78, 91, 204, 216, 737, 808, 1402, 1479, 1695
DpnI	GATC	4 cut(s)	253, 261, 1522, 1717
DpnII	GATC	4 cut(s)	251, 259, 1520, 1715
DriI	GACNNNNNGTC	1 cut(s)	1172
Eam1104I	CTCTTC	1 cut(s)	162
Eam1105I	GACNNNNNGTC	1 cut(s)	1172
EarI	CTCTTC	1 cut(s)	162
Eco130I	CCWWGG	1 cut(s)	1282
Eco24I	GRGCYC	1 cut(s)	25
Eco31I	GGTCTC	1 cut(s)	784
Eco32I	GATATC	1 cut(s)	921
Eco47I	GGWCC	1 cut(s)	1022
Eco57I	CTGAAG	2 cut(s)	186, 606
Eco88I	CYCGRG	1 cut(s)	1065
EcoO109I	RGGNCCY	1 cut(s)	21
EcoRI	GAATTC	2 cut(s)	1287, 1323
EcoRII	CCWGG	3 cut(s)	1308, 1347, 1470
EcoRV	GATATC	1 cut(s)	921
EcoT14I	CCWWGG	1 cut(s)	1282
EcoT22I	ATGCAT	1 cut(s)	580
EcoT38I	GRGCYC	1 cut(s)	25
ErhI	CCWWGG	1 cut(s)	1282
FaeI	CATG	8 cut(s)	258, 393, 421, 578, 778, 914, 1153, 1528
FalI	AAGNNNNNCTT	4 cut(s)	1257, 1289, 1565, 1597
FaqI	GGGAC	7 cut(s)	22, 193, 382, 979, 1083, 1111, 1179
FatI	CATG	8 cut(s)	254, 389, 417, 574, 774, 910, 1149, 1524
FauI	CCCGC	2 cut(s)	439, 1615
FauNDI	CATATG	1 cut(s)	27
FblI	GTMKAC	1 cut(s)	764
FokI	GGATG	5 cut(s)	422, 1018, 1364, 1459, 1579
FriOI	GRGCYC	1 cut(s)	25
FspBI	CTAG	1 cut(s)	797
GsaI	CCCAGC	2 cut(s)	143, 1166
GsuI	CTGGAG	1 cut(s)	1331
HaeIII	GGCC	3 cut(s)	23, 129, 305
HapII	CCGG	4 cut(s)	817, 1066, 1115, 1548
Hin1I	GRCGYC	1 cut(s)	761
Hin1II	CATG	8 cut(s)	258, 393, 421, 578, 778, 914, 1153, 1528
HincII	GTYRAC	2 cut(s)	237, 277
HindII	GTYRAC	2 cut(s)	237, 277
HindIII	AAGCTT	2 cut(s)	88, 821
HinfI	GANTC	8 cut(s)	120, 464, 644, 871, 1173, 1183, 1211, 1475
HpaII	CCGG	4 cut(s)	817, 1066, 1115, 1548
HphI	GGTGA	4 cut(s)	893, 1028, 1220, 1615
Hpy166II	GTNNAC	5 cut(s)	237, 277, 765, 870, 1579
Hpy188III	TCNNGA	9 cut(s)	52, 249, 407, 749, 817, 1331, 1675, 1713, 1719
Hpy8I	GTNNAC	5 cut(s)	237, 277, 765, 870, 1579
HpyAV	CCTTC	2 cut(s)	552, 934
HpyCH4III	ACNGT	3 cut(s)	373, 928, 1690
HpyCH4IV	ACGT	1 cut(s)	761
HpyF3I	CTNAG	9 cut(s)	78, 91, 204, 216, 737, 808, 1402, 1479, 1695
HpySE526I	ACGT	1 cut(s)	761
Hsp92I	GRCGYC	1 cut(s)	761
Hsp92II	CATG	8 cut(s)	258, 393, 421, 578, 778, 914, 1153, 1528
Kpn2I	TCCGGA	1 cut(s)	816
Kzo9I	GATC	4 cut(s)	251, 259, 1520, 1715
LmnI	GCTCC	5 cut(s)	100, 544, 1066, 1097, 1268
LweI	GCATC	5 cut(s)	587, 1055, 1101, 1183, 1342
MaeI	CTAG	1 cut(s)	797
MaeII	ACGT	1 cut(s)	761
MaeIII	GTNAC	6 cut(s)	308, 567, 667, 724, 886, 1248
MalI	GATC	4 cut(s)	253, 261, 1522, 1717
MboI	GATC	4 cut(s)	251, 259, 1520, 1715
MboII	GAAGA	6 cut(s)	179, 473, 724, 1270, 1319, 1576
MfeI	CAATTG	1 cut(s)	627
MflI	RGATCY	2 cut(s)	1520, 1715
MhlI	GDGCHC	3 cut(s)	25, 541, 1273
MluCI	AATT	9 cut(s)	47, 378, 627, 744, 1287, 1323, 1334, 1395, 1407
MlyI	GAGTC	3 cut(s)	865, 1182, 1469
Mph1103I	ATGCAT	1 cut(s)	580
MroI	TCCGGA	1 cut(s)	816
MseI	TTAA	2 cut(s)	381, 660
MslI	CAYNNNNRTG	4 cut(s)	773, 896, 1154, 1206
MspA1I	CMGCKG	4 cut(s)	193, 359, 982, 1492
MspI	CCGG	4 cut(s)	817, 1066, 1115, 1548
MspR9I	CCNGG	5 cut(s)	1066, 1067, 1310, 1349, 1472
MunI	CAATTG	1 cut(s)	627
Mva1269I	GAATGC	1 cut(s)	473
MvaI	CCWGG	3 cut(s)	1310, 1349, 1472
MvnI	CGCG	1 cut(s)	64
NciI	CCSGG	2 cut(s)	1066, 1067
NdeI	CATATG	1 cut(s)	27
NdeII	GATC	4 cut(s)	251, 259, 1520, 1715
NlaIII	CATG	8 cut(s)	258, 393, 421, 578, 778, 914, 1153, 1528
NlaIV	GGNNCC	6 cut(s)	22, 23, 1062, 1522, 1701, 1717
NmuCI	GTSAC	3 cut(s)	667, 724, 1248
NsiI	ATGCAT	1 cut(s)	580
NspI	RCATGY	1 cut(s)	578
OliI	CACNNNNGTG	1 cut(s)	1206
PctI	GAATGC	1 cut(s)	473
PfeI	GAWTC	5 cut(s)	120, 464, 644, 1183, 1211
PflMI	CCANNNNNTGG	1 cut(s)	248
PleI	GAGTC	3 cut(s)	865, 1181, 1469
PpsI	GAGTC	3 cut(s)	865, 1181, 1469
Psp6I	CCWGG	3 cut(s)	1308, 1347, 1470
PspFI	CCCAGC	2 cut(s)	139, 1162
PspGI	CCWGG	3 cut(s)	1308, 1347, 1470
PspN4I	GGNNCC	6 cut(s)	22, 23, 1062, 1522, 1701, 1717
PspOMI	GGGCCC	1 cut(s)	21
PspPI	GGNCC	4 cut(s)	21, 22, 128, 1022
PsrI	GAACNNNNNNTAC	2 cut(s)	1683, 1715
PstI	CTGCAG	3 cut(s)	364, 1438, 1546
PsuI	RGATCY	2 cut(s)	1520, 1715
PvuII	CAGCTG	3 cut(s)	193, 359, 1492
RsaI	GTAC	4 cut(s)	1236, 1451, 1513, 1592
RsaNI	GTAC	4 cut(s)	1235, 1450, 1512, 1591
RseI	CAYNNNNRTG	4 cut(s)	773, 896, 1154, 1206
SaqAI	TTAA	2 cut(s)	381, 660
Sau3AI	GATC	4 cut(s)	251, 259, 1520, 1715
Sau96I	GGNCC	4 cut(s)	21, 22, 128, 1022
SchI	GAGTC	3 cut(s)	865, 1182, 1469
ScrFI	CCNGG	5 cut(s)	1066, 1067, 1310, 1349, 1472
SduI	GDGCHC	3 cut(s)	25, 541, 1273
SfaNI	GCATC	5 cut(s)	587, 1055, 1101, 1183, 1342
SfcI	CTRYAG	5 cut(s)	339, 360, 1086, 1434, 1542
SinI	GGWCC	1 cut(s)	1022
SmaI	CCCGGG	1 cut(s)	1067
SmiMI	CAYNNNNRTG	4 cut(s)	773, 896, 1154, 1206
SmlI	CTYRAG	1 cut(s)	1263
SmoI	CTYRAG	1 cut(s)	1263
SpeI	ACTAGT	1 cut(s)	796
Sse9I	AATT	9 cut(s)	47, 378, 627, 744, 1287, 1323, 1334, 1395, 1407
SsiI	CCGC	7 cut(s)	64, 67, 353, 446, 980, 1316, 1622
SspI	AATATT	2 cut(s)	348, 1369
SspMI	CTAG	1 cut(s)	797
StyD4I	CCNGG	5 cut(s)	1064, 1065, 1308, 1347, 1470
StyI	CCWWGG	1 cut(s)	1282
TaaI	ACNGT	3 cut(s)	373, 928, 1690
TaiI	ACGT	1 cut(s)	764
TaqI	TCGA	2 cut(s)	688, 1676
TasI	AATT	9 cut(s)	47, 378, 627, 744, 1287, 1323, 1334, 1395, 1407
TauI	GCSGC	3 cut(s)	67, 356, 1319
TfiI	GAWTC	5 cut(s)	120, 464, 644, 1183, 1211
Tru1I	TTAA	2 cut(s)	381, 660
Tru9I	TTAA	2 cut(s)	381, 660
TscAI	CASTG	6 cut(s)	378, 429, 598, 676, 933, 1431
TseFI	GTSAC	3 cut(s)	667, 724, 1248
Tsp45I	GTSAC	3 cut(s)	667, 724, 1248
TspDTI	ATGAA	1 cut(s)	953
TspGWI	ACGGA	1 cut(s)	1267
TspMI	CCCGGG	1 cut(s)	1065
TspRI	CASTG	6 cut(s)	378, 429, 598, 676, 933, 1431
Van91I	CCANNNNNTGG	1 cut(s)	248
VpaK11BI	GGWCC	1 cut(s)	1022
XapI	RAATTY	2 cut(s)	1287, 1323
XceI	RCATGY	1 cut(s)	578
XmaI	CCCGGG	1 cut(s)	1065
XmiI	GTMKAC	1 cut(s)	764
XspI	CTAG	1 cut(s)	797
ZraI	GACGTC	1 cut(s)	762
Zsp2I	ATGCAT	1 cut(s)	580

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.