Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0001067

Physical Location & Seq

Genomic Coordinates Reverse (-)

40017294 .. 40019236

Gene Structure 1943 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G017870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 945 bp

ATGGTGGACCCCAACCTCTCCTTCCTCTCCCTCCTCCTCCTCCTCCCTCTTGCTCTCCTCCTCCTCCTCTACCTCATTGTCCGCCCCCGCCCCGCCACTGTCCCAATCAAAAACCGTCACGTCTTCATCACCGGTGGATCCAGCGGCATCGGCCTCGCCCTGGCCCACCGCGCCGCCTCTGAGGGCGCCAAAGTCTCCATCCTCGCCCGCTCCCTCGACAAGCTCGAGGAGGCCAAGAATTACATCCAGCTCTCCACTGGCATTGACGTCGCCATCTTCGCTGCCGACGTCCGTGAATATGACGCCGTTTCCAAGGCCATCGAGGTGGCGGGCCCGATCGATGTGTTGGTTGTCAACCAGGGAGTATTCGTCCCTGGGGAGCTGGAGAAGCAGGGATTGGATGAGGTGAGGTTCATGGTGGATGTCAATTTGATGGGTAGCTTCAACATGATCAAAGCTGCTCTGCCAGGAATGAAGGACAGGAAGGACCGCGGACCGGGTTCGATTGCTCTGATGTCGTCGCAGGCCGCTAGCAAATTTGGGCTTCGGGGTTTGGCGGAAGCTCTGCAGCAAGAGGTTATTGCAGATGACATTCACGTTTCGCTGATTTTCCCTCCAGATACTGACACTCCTGGACTCACTGAAGAAACTAAGAAGAGGCCGCAGCTGACCAGCATTATTGCGGAATCATCTGGTGCAATGAAAGCCGAGGAAGTTGCGAAGAAAGCTTTGGATGGAATCAAGTCTGCTTCCTTTATTGTGCCTTGCAACTTTGAAGGGCTTTTGTTGTCCATTGCCACTGCCGGGTTGTCGCCTCAGAGATCATTCGTCATGGCATTTGTGGAGGTGGTTGCTGCTGGTGTAATACGGATAGCTGCTCTGGGATTTCAGTGGAATTGGTATACAAGTATACACAAGTGGCATGGACAAAACAAAAGGACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006629 GO:0006643 GO:0006665 GO:0006666 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009987 GO:0012505 GO:0016020 GO:0016491 GO:0016614 GO:0016616 GO:0030148 GO:0031984 GO:0042175 GO:0042180 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044421 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046467 GO:0046519 GO:0047560 GO:0055114 GO:0071704 GO:0097164 GO:0098827 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00600 ko01100 map00600 map01100

Pfam Domains

Protein Families

adh_short

Protein Analysis

314

Amino Acids

33.77

Weight (kDa)

6.98

Isoelectric Point (pI)

33.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
adh_short	PF00106	40 - 219	9.7e-33	short chain dehydrogenase
KR	PF08659	41 - 154	2.4e-06	KR domain
adh_short_C2	PF13561	48 - 240	1.4e-17	Enoyl-(Acyl carrier protein) reductase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001067)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06060 AT3G06060 AT5G19200
fragaria_vesca	FvH4_4g14820
malus_domestica	MD13G1185700.v1.1
prunus_persica	Prupe.6G171900_v2.0.a1 Prupe.6G197600_v2.0.a1 Prupe.6G197600_v2.0.a1 Prupe.6G197600_v2.0.a1
pyrus_communis	pycom13g16020 pycom16g15630
rosa_chinensis	RchiOBHm_Chr4g0417501 RchiOBHm_Chr6g0272751 RchiOBHm_Chr6g0272831 RchiOBHm_Chr6g0272851 RchiOBHm_Chr6g0272861 RchiOBHm_Chr6g0272881
rosa_laevigata	RLG00000007902 RLG00000007903 RLG00000007908 RLG00000007909 RLG00000013658 RLG00000013659 RLG00000023098
rosa_multiflora	Rmu_co8170416.1_g000001 Rmu_co8391473.1_g000001 Rmu_sc0002793.1_g000014 Rmu_sc0004142.1_g000014 Rmu_sc0004142.1_g000018 Rmu_sc0004540.1_g000023 Rmu_ssc0000024.1_g000001
rosa_roxburghii	Rroxscaffold_7G00195980 Rroxscaffold_7G00196010 Rroxscaffold_7G00196020
rosa_rugosa	Rorug04G0148100 Rorug04G0148100 Rorug04G0148200 Rorug04G0148300 Rorug04G0148400 Rorug06G0070800
rosa_samantha	Rh4AG211400 Rh4BG211600 Rh4CG222100 Rh4DG209100 Rh6AG186800 Rh6BG190200 Rh6CG189000 Rh6CG189300 Rh6CG189600 Rh6DG180400 Rh6DG180700 Rh6DG180800 Rh6DG180900 Rh7AG364400 Rh7DG358900
rosa_wichuraiana	Rw4G017870 Rw6G016120 Rw6G016130 Rw6G016150 Rw7G030890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	270, 291
AccB1I	GGYRCC	1 cut(s)	185
AccBSI	CCGCTC	1 cut(s)	210
AccI	GTMKAC	2 cut(s)	902, 910
AccII	CGCG	2 cut(s)	171, 492
AclWI	GGATC	2 cut(s)	132, 145
AcsI	RAATTY	1 cut(s)	536
AcuI	CTGAAG	1 cut(s)	663
AcyI	GRCGYC	4 cut(s)	186, 267, 288, 303
AfiI	CCNNNNNNNGG	3 cut(s)	160, 496, 804
AgeI	ACCGGT	1 cut(s)	131
AgsI	TTSAA	2 cut(s)	445, 776
AjiI	CACGTC	1 cut(s)	121
AjnI	CCWGG	5 cut(s)	159, 357, 373, 466, 631
AjuI	GAANNNNNNNTTGG	5 cut(s)	37, 380, 412, 713, 745
AluBI	AGCT	9 cut(s)	223, 250, 382, 441, 458, 563, 667, 728, 875
AluI	AGCT	9 cut(s)	223, 250, 382, 441, 458, 563, 667, 728, 875
Alw26I	GTCTC	1 cut(s)	199
AlwI	GGATC	2 cut(s)	132, 145
AlwNI	CAGNNNCTG	1 cut(s)	623
Ama87I	CYCGRG	1 cut(s)	224
AoxI	GGCC	7 cut(s)	151, 162, 231, 315, 331, 525, 659
ApaI	GGGCCC	1 cut(s)	335
ApeKI	GCWGC	6 cut(s)	281, 458, 568, 664, 854, 875
ApoI	RAATTY	1 cut(s)	536
AsiGI	ACCGGT	1 cut(s)	131
AspLEI	GCGC	2 cut(s)	173, 188
AspS9I	GGNCC	7 cut(s)	7, 163, 331, 332, 487, 494, 939
AsuC2I	CCSGG	2 cut(s)	498, 805
AsuHPI	GGTGA	2 cut(s)	121, 418
AsuNHI	GCTAGC	1 cut(s)	530
AvaI	CYCGRG	1 cut(s)	224
AvaII	GGWCC	4 cut(s)	7, 487, 494, 939
BaeGI	GKGCMC	1 cut(s)	335
BamHI	GGATCC	1 cut(s)	137
BanI	GGYRCC	1 cut(s)	185
BanII	GRGCYC	1 cut(s)	335
BbsI	GAAGAC	1 cut(s)	115
BbvI	GCAGC	6 cut(s)	268, 445, 580, 676, 841, 862
BccI	CCATC	5 cut(s)	206, 281, 326, 427, 728
BceAI	ACGGC	1 cut(s)	290
BcgI	CGANNNNNNTGC	6 cut(s)	136, 170, 250, 284, 698, 732
BciT130I	CCWGG	5 cut(s)	161, 359, 375, 468, 633
BclI	TGATCA	1 cut(s)	450
BcnI	CCSGG	2 cut(s)	498, 805
BcoDI	GTCTC	1 cut(s)	199
BfaI	CTAG	1 cut(s)	531
BfmI	CTRYAG	1 cut(s)	566
BfoI	RGCGCY	1 cut(s)	189
Bme1390I	CCNGG	7 cut(s)	161, 359, 375, 468, 498, 633, 805
Bme18I	GGWCC	4 cut(s)	7, 487, 494, 939
BmeT110I	CYCGRG	1 cut(s)	224
BmgBI	CACGTC	1 cut(s)	121
BmgT120I	GGNCC	7 cut(s)	7, 163, 331, 332, 487, 494, 939
BmiI	GGNNCC	4 cut(s)	9, 139, 187, 333
BmrFI	CCNGG	7 cut(s)	161, 359, 375, 468, 498, 633, 805
BmsI	GCATC	1 cut(s)	156
BmtI	GCTAGC	1 cut(s)	534
BpiI	GAAGAC	1 cut(s)	115
BpmI	CTGGAG	2 cut(s)	404, 600
BpuMI	CCSGG	2 cut(s)	498, 805
Bsa29I	ATCGAT	1 cut(s)	339
BsaHI	GRCGYC	4 cut(s)	186, 267, 288, 303
BsaJI	CCNNGG	7 cut(s)	159, 312, 358, 373, 374, 490, 708
BsaWI	WCCGGW	1 cut(s)	131
BsaXI	ACNNNNNCTCC	4 cut(s)	354, 384, 613, 643
Bsc4I	CCNNNNNNNGG	3 cut(s)	160, 496, 804
Bse118I	RCCGGY	1 cut(s)	131
Bse1I	ACTGG	1 cut(s)	262
Bse3DI	GCAATG	2 cut(s)	705, 792
BseBI	CCWGG	5 cut(s)	161, 359, 375, 468, 633
BseCI	ATCGAT	1 cut(s)	339
BseDI	CCNNGG	7 cut(s)	159, 312, 358, 373, 374, 490, 708
BseGI	GGATG	5 cut(s)	198, 243, 406, 427, 739
BseLI	CCNNNNNNNGG	3 cut(s)	160, 496, 804
BseMI	GCAATG	2 cut(s)	705, 792
BseMII	CTCAG	2 cut(s)	171, 830
BseNI	ACTGG	1 cut(s)	262
BseRI	GAGGAG	9 cut(s)	23, 26, 29, 32, 47, 50, 53, 56, 242
BseSI	GKGCMC	1 cut(s)	335
BseXI	GCAGC	6 cut(s)	268, 445, 580, 676, 841, 862
Bsh1236I	CGCG	2 cut(s)	171, 492
Bsh1285I	CGRYCG	1 cut(s)	339
BshFI	GGCC	7 cut(s)	153, 164, 233, 317, 333, 527, 661
BshNI	GGYRCC	1 cut(s)	185
BshTI	ACCGGT	1 cut(s)	131
BshVI	ATCGAT	1 cut(s)	339
BsiEI	CGRYCG	1 cut(s)	339
BsiHKCI	CYCGRG	1 cut(s)	224
BsiSI	CCGG	3 cut(s)	132, 497, 804
BslFI	GGGAC	2 cut(s)	86, 356
BslI	CCNNNNNNNGG	3 cut(s)	160, 496, 804
BsmAI	GTCTC	1 cut(s)	199
BsmFI	GGGAC	2 cut(s)	86, 356
BsnI	GGCC	7 cut(s)	153, 164, 233, 317, 333, 527, 661
BsoBI	CYCGRG	1 cut(s)	224
Bsp120I	GGGCCC	1 cut(s)	331
Bsp1286I	GDGCHC	1 cut(s)	335
Bsp143I	GATC	4 cut(s)	137, 336, 450, 821
BspANI	GGCC	7 cut(s)	153, 164, 233, 317, 333, 527, 661
BspCNI	CTCAG	2 cut(s)	172, 829
BspDI	ATCGAT	1 cut(s)	339
BspFNI	CGCG	2 cut(s)	171, 492
BspLI	GGNNCC	4 cut(s)	9, 139, 187, 333
BspMAI	CTGCAG	1 cut(s)	570
BspOI	GCTAGC	1 cut(s)	534
BspPI	GGATC	2 cut(s)	132, 145
BspT107I	GGYRCC	1 cut(s)	185
BsrBI	CCGCTC	1 cut(s)	210
BsrDI	GCAATG	2 cut(s)	705, 792
BsrFI	RCCGGY	1 cut(s)	131
BsrI	ACTGG	1 cut(s)	262
BssAI	RCCGGY	1 cut(s)	131
BssECI	CCNNGG	7 cut(s)	159, 312, 358, 373, 374, 490, 708
BssMI	GATC	4 cut(s)	137, 336, 450, 821
BssNAI	GTATAC	2 cut(s)	903, 911
BssNI	GRCGYC	4 cut(s)	186, 267, 288, 303
BssT1I	CCWWGG	1 cut(s)	312
Bst1107I	GTATAC	2 cut(s)	903, 911
Bst2UI	CCWGG	5 cut(s)	161, 359, 375, 468, 633
Bst4CI	ACNGT	2 cut(s)	100, 116
Bst6I	CTCTTC	1 cut(s)	650
BstACI	GRCGYC	4 cut(s)	186, 267, 288, 303
BstC8I	GCNNGC	4 cut(s)	208, 331, 525, 532
BstDEI	CTNAG	3 cut(s)	180, 651, 816
BstDSI	CCRYGG	1 cut(s)	490
BstF5I	GGATG	5 cut(s)	198, 243, 406, 427, 739
BstFNI	CGCG	2 cut(s)	171, 492
BstH2I	RGCGCY	1 cut(s)	189
BstHHI	GCGC	2 cut(s)	173, 188
BstKTI	GATC	4 cut(s)	140, 339, 453, 824
BstMAI	GTCTC	1 cut(s)	199
BstMBI	GATC	4 cut(s)	137, 336, 450, 821
BstMCI	CGRYCG	1 cut(s)	339
BstMWI	GCNNNNNNNGC	6 cut(s)	150, 170, 278, 388, 704, 725
BstNI	CCWGG	5 cut(s)	161, 359, 375, 468, 633
BstSCI	CCNGG	7 cut(s)	159, 357, 373, 466, 496, 631, 803
BstSFI	CTRYAG	1 cut(s)	566
BstSLI	GKGCMC	1 cut(s)	335
BstUI	CGCG	2 cut(s)	171, 492
BstV1I	GCAGC	6 cut(s)	268, 445, 580, 676, 841, 862
BstV2I	GAAGAC	1 cut(s)	115
BstX2I	RGATCY	1 cut(s)	137
BstXI	CCANNNNNNTGG	1 cut(s)	325
BstYI	RGATCY	1 cut(s)	137
BstZ17I	GTATAC	2 cut(s)	903, 911
Bsu15I	ATCGAT	1 cut(s)	339
BsuRI	GGCC	7 cut(s)	153, 164, 233, 317, 333, 527, 661
BsuTUI	ATCGAT	1 cut(s)	339
BtgI	CCRYGG	1 cut(s)	490
BtrI	CACGTC	1 cut(s)	121
BtsCI	GGATG	5 cut(s)	198, 243, 406, 427, 739
BtsI	GCAGTG	1 cut(s)	798
BtsIMutI	CAGTG	5 cut(s)	96, 255, 639, 798, 896
Cac8I	GCNNGC	4 cut(s)	208, 331, 525, 532
CaiI	CAGNNNCTG	1 cut(s)	623
CfoI	GCGC	2 cut(s)	173, 188
Cfr10I	RCCGGY	1 cut(s)	131
Cfr13I	GGNCC	7 cut(s)	7, 163, 331, 332, 487, 494, 939
Cfr42I	CCGCGG	1 cut(s)	493
ClaI	ATCGAT	1 cut(s)	339
CpoI	CGGWCCG	1 cut(s)	494
CseI	GACGC	1 cut(s)	311
CspAI	ACCGGT	1 cut(s)	131
CspCI	CAANNNNNGTGG	2 cut(s)	244, 279
CspI	CGGWCCG	1 cut(s)	494
CviAII	CATG	4 cut(s)	415, 448, 832, 923
DdeI	CTNAG	3 cut(s)	180, 651, 816
DinI	GGCGCC	1 cut(s)	187
DpnI	GATC	4 cut(s)	139, 338, 452, 823
DpnII	GATC	4 cut(s)	137, 336, 450, 821
Eam1104I	CTCTTC	1 cut(s)	650
EarI	CTCTTC	1 cut(s)	650
EciI	GGCGGA	2 cut(s)	71, 572
Eco130I	CCWWGG	1 cut(s)	312
Eco24I	GRGCYC	1 cut(s)	335
Eco47I	GGWCC	4 cut(s)	7, 487, 494, 939
Eco57I	CTGAAG	1 cut(s)	663
Eco88I	CYCGRG	1 cut(s)	224
EcoO109I	RGGNCCY	1 cut(s)	939
EcoRII	CCWGG	5 cut(s)	159, 357, 373, 466, 631
EcoT14I	CCWWGG	1 cut(s)	312
EcoT38I	GRGCYC	1 cut(s)	335
EgeI	GGCGCC	1 cut(s)	187
EheI	GGCGCC	1 cut(s)	187
ErhI	CCWWGG	1 cut(s)	312
FaeI	CATG	4 cut(s)	418, 451, 835, 926
FaiI	YATR	7 cut(s)	300, 416, 449, 833, 903, 911, 924
FaqI	GGGAC	2 cut(s)	86, 356
FatI	CATG	4 cut(s)	414, 447, 831, 922
FauI	CCCGC	4 cut(s)	95, 100, 215, 322
FbaI	TGATCA	1 cut(s)	450
FblI	GTMKAC	2 cut(s)	902, 910
FokI	GGATG	5 cut(s)	185, 230, 413, 434, 746
FriOI	GRGCYC	1 cut(s)	335
FspBI	CTAG	1 cut(s)	531
GlaI	GCGC	2 cut(s)	172, 187
GsuI	CTGGAG	2 cut(s)	404, 600
HaeII	RGCGCY	1 cut(s)	189
HaeIII	GGCC	7 cut(s)	153, 164, 233, 317, 333, 527, 661
HapII	CCGG	3 cut(s)	132, 497, 804
HgaI	GACGC	1 cut(s)	311
HhaI	GCGC	2 cut(s)	173, 188
Hin1I	GRCGYC	4 cut(s)	186, 267, 288, 303
Hin1II	CATG	4 cut(s)	418, 451, 835, 926
Hin6I	GCGC	2 cut(s)	171, 186
HinP1I	GCGC	2 cut(s)	171, 186
HincII	GTYRAC	1 cut(s)	355
HindII	GTYRAC	1 cut(s)	355
HindIII	AAGCTT	1 cut(s)	726
HinfI	GANTC	3 cut(s)	636, 686, 738
HpaII	CCGG	3 cut(s)	132, 497, 804
HphI	GGTGA	2 cut(s)	121, 418
Hpy166II	GTNNAC	4 cut(s)	7, 355, 903, 911
Hpy188I	TCNGA	3 cut(s)	181, 513, 819
Hpy188III	TCNNGA	1 cut(s)	617
Hpy8I	GTNNAC	4 cut(s)	7, 355, 903, 911
Hpy99I	CGWCG	3 cut(s)	272, 290, 523
HpyAV	CCTTC	4 cut(s)	31, 469, 478, 770
HpyCH4III	ACNGT	2 cut(s)	100, 116
HpyCH4IV	ACGT	4 cut(s)	120, 267, 288, 597
HpyCH4V	TGCA	4 cut(s)	568, 584, 698, 768
HpyF10VI	GCNNNNNNNGC	6 cut(s)	150, 170, 278, 388, 704, 725
HpyF3I	CTNAG	3 cut(s)	180, 651, 816
HpySE526I	ACGT	4 cut(s)	120, 267, 288, 597
Hsp92I	GRCGYC	4 cut(s)	186, 267, 288, 303
Hsp92II	CATG	4 cut(s)	418, 451, 835, 926
HspAI	GCGC	2 cut(s)	171, 186
KasI	GGCGCC	1 cut(s)	185
Ksp22I	TGATCA	1 cut(s)	450
KspI	CCGCGG	1 cut(s)	493
Kzo9I	GATC	4 cut(s)	137, 336, 450, 821
LmnI	GCTCC	2 cut(s)	215, 379
Lsp1109I	GCAGC	6 cut(s)	268, 445, 580, 676, 841, 862
LweI	GCATC	1 cut(s)	156
MaeI	CTAG	1 cut(s)	531
MaeII	ACGT	4 cut(s)	120, 267, 288, 597
MaeIII	GTNAC	1 cut(s)	116
MalI	GATC	4 cut(s)	139, 338, 452, 823
MbiI	CCGCTC	1 cut(s)	210
MboI	GATC	4 cut(s)	137, 336, 450, 821
MboII	GAAGA	5 cut(s)	115, 268, 656, 667, 733
MflI	RGATCY	1 cut(s)	137
MhlI	GDGCHC	1 cut(s)	335
MluCI	AATT	4 cut(s)	238, 427, 536, 895
Mly113I	GGCGCC	1 cut(s)	186
MlyI	GAGTC	1 cut(s)	630
MslI	CAYNNNNRTG	1 cut(s)	323
MspA1I	CMGCKG	3 cut(s)	144, 492, 667
MspI	CCGG	3 cut(s)	132, 497, 804
MspR9I	CCNGG	7 cut(s)	161, 359, 375, 468, 498, 633, 805
MvaI	CCWGG	5 cut(s)	161, 359, 375, 468, 633
MvnI	CGCG	2 cut(s)	171, 492
MwoI	GCNNNNNNNGC	6 cut(s)	150, 170, 278, 388, 704, 725
NarI	GGCGCC	1 cut(s)	186
NciI	CCSGG	2 cut(s)	498, 805
NdeII	GATC	4 cut(s)	137, 336, 450, 821
NheI	GCTAGC	1 cut(s)	530
NlaIII	CATG	4 cut(s)	418, 451, 835, 926
NlaIV	GGNNCC	4 cut(s)	9, 139, 187, 333
NmeAIII	GCCGAG	1 cut(s)	733
NmuCI	GTSAC	1 cut(s)	116
PaeR7I	CTCGAG	1 cut(s)	224
PasI	CCCWGGG	1 cut(s)	374
PcsI	WCGNNNNNNNCGW	2 cut(s)	222, 285
PfeI	GAWTC	2 cut(s)	686, 738
PfoI	TCCNGGA	1 cut(s)	631
PinAI	ACCGGT	1 cut(s)	131
Ple19I	CGATCG	1 cut(s)	339
PleI	GAGTC	1 cut(s)	630
PluTI	GGCGCC	1 cut(s)	189
PpsI	GAGTC	1 cut(s)	630
PpuMI	RGGWCCY	1 cut(s)	939
Psp5II	RGGWCCY	1 cut(s)	939
Psp6I	CCWGG	5 cut(s)	159, 357, 373, 466, 631
PspGI	CCWGG	5 cut(s)	159, 357, 373, 466, 631
PspN4I	GGNNCC	4 cut(s)	9, 139, 187, 333
PspOMI	GGGCCC	1 cut(s)	331
PspPI	GGNCC	7 cut(s)	7, 163, 331, 332, 487, 494, 939
PspPPI	RGGWCCY	1 cut(s)	939
PspXI	VCTCGAGB	1 cut(s)	224
PstI	CTGCAG	1 cut(s)	570
PstNI	CAGNNNCTG	1 cut(s)	623
PsuI	RGATCY	1 cut(s)	137
PvuI	CGATCG	1 cut(s)	339
PvuII	CAGCTG	1 cut(s)	667
RseI	CAYNNNNRTG	1 cut(s)	323
Rsr2I	CGGWCCG	1 cut(s)	494
RsrII	CGGWCCG	1 cut(s)	494
SacII	CCGCGG	1 cut(s)	493
Sau3AI	GATC	4 cut(s)	137, 336, 450, 821
Sau96I	GGNCC	7 cut(s)	7, 163, 331, 332, 487, 494, 939
SchI	GAGTC	1 cut(s)	630
ScrFI	CCNGG	7 cut(s)	161, 359, 375, 468, 498, 633, 805
SduI	GDGCHC	1 cut(s)	335
SfaNI	GCATC	1 cut(s)	156
SfcI	CTRYAG	1 cut(s)	566
SfoI	GGCGCC	1 cut(s)	187
Sfr274I	CTCGAG	1 cut(s)	224
Sfr303I	CCGCGG	1 cut(s)	493
SgrAI	CRCCGGYG	1 cut(s)	131
SgrBI	CCGCGG	1 cut(s)	493
SinI	GGWCC	4 cut(s)	7, 487, 494, 939
SlaI	CTCGAG	1 cut(s)	224
SmiMI	CAYNNNNRTG	1 cut(s)	323
SmlI	CTYRAG	1 cut(s)	224
SmoI	CTYRAG	1 cut(s)	224
Sse9I	AATT	4 cut(s)	238, 427, 536, 895
SspDI	GGCGCC	1 cut(s)	185
SspMI	CTAG	1 cut(s)	531
StyD4I	CCNGG	7 cut(s)	159, 357, 373, 466, 496, 631, 803
StyI	CCWWGG	1 cut(s)	312
TaaI	ACNGT	2 cut(s)	100, 116
TaiI	ACGT	4 cut(s)	123, 270, 291, 600
TaqI	TCGA	5 cut(s)	216, 225, 321, 339, 503
TasI	AATT	4 cut(s)	238, 427, 536, 895
TauI	GCSGC	4 cut(s)	147, 176, 530, 664
TfiI	GAWTC	2 cut(s)	686, 738
TscAI	CASTG	5 cut(s)	103, 262, 646, 805, 896
TseFI	GTSAC	1 cut(s)	116
TseI	GCWGC	6 cut(s)	281, 458, 568, 664, 854, 875
Tsp45I	GTSAC	1 cut(s)	116
TspDTI	ATGAA	4 cut(s)	115, 403, 488, 716
TspGWI	ACGGA	2 cut(s)	281, 883
TspRI	CASTG	5 cut(s)	103, 262, 646, 805, 896
VpaK11BI	GGWCC	4 cut(s)	7, 487, 494, 939
XapI	RAATTY	1 cut(s)	536
XcmI	CCANNNNNNNNNTGG	1 cut(s)	254
XhoI	CTCGAG	1 cut(s)	224
XmiI	GTMKAC	2 cut(s)	902, 910
XspI	CTAG	1 cut(s)	531
ZraI	GACGTC	2 cut(s)	268, 289

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.