MD07G1041000.v1.1

Angio-associated migratory cell

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0001404
Physical Location & Seq
Reverse (-)
3421206 .. 3427240
6035 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1041000.v1.1.491

Sequence Viewer

Length: 1410 bp
ATGGGAACCGCAGATGAAAAGTTCATTAAAAAGGAATATTATTTACACGTGGCGACATATAAGTGGCTGTTTGAAAGAAAGATAATAGACTGCGTGACATCTGATCACTATTACAATTCACTTCCGAGTCGTTCCGACGCCGCACAACTCTTCCTTGTCCAACTTTCTCTCTGTTTCCCTGTGTCTATTGCTGCGCCGCCGCCGCCGCCACCGGCATCCCAGAGCACAGAGACGAAGATGAGCAATCCAGCTCATGATTTTCATGAAGAAGAAGACGACCAGGGGGAGATATTTCTTGATGAAGATGACATAATCCGAGAATCCACTGTTGATGACGAAGATCTTCCTGATGCAGATGATCAAAGTGTTGATGAGCCTGATGACGATGATTCCATGCACACGTTCACTGGCCATAACGGTGAGCTTTACACAGTTGTCTGCAGCCCAACAGATCCTACTTTGGTTGCAACCGGGGGTGGAGATGACAGAGGGTTTCTTTGGAGAATTGGAGTAGGAGATTATGCTTTTGAGCTTCAAGGTCATAAGGATTCTGTTTCTAATTTATCATTTAGTACTGATGGGCTGTTGCTTGCATCCGGAAGCTTGGATGGAATTATTCAAATTTGGGATGTAGCGAACGGAGTTCTGAAAAAAACTCTCGAAGGTCCTGGAGGGGGCATTGAGTGGGTCAGGTGGCATCCTAGGGGGCATCTGGTCCTGGCTGGTTCAGAGGACTGCACGGTCTGGATGTGGAATGCTGACAATGGTTCCTATCTTAATATGTTTTCAGGCCATGGTAGTAACGTGAGTTGTGGTGATTTTACCCCTGATGGTAAAACAATATGCACTGGTTCTGCTGATGCAACTTTGAGAATATGGAATCCAAAAAGTGGCGAAAACATTCATGTCATACAAGGTCACCCATACCATACTGCTGGGTTAACATGTTTGGCAATAAACTCTGATTCAACTCTAGCTTATACTGGTTCTGAAGATGGCTCTATCCATATCGTCAACATAACTACTGGAAAGGTTGTTAGTTCCCTAGCTTCACGTTCAGATTCTGTTGAATGCATCGGGCTTGCACCAAGCTCTCCATGGGCTGCAACTGGAAGTATGGATAAGAAGCTTGTTATCTGGGATTTGCCTTCTTCGTCGGCCCGTGCTACATGTGAACATGAGGATGGAGTGACATGCTTGACATGGCTTGGTCAATCAAATTACCTAGCAACAGGTTGCGGGGATGGAAAGGTTCGAGTCTGGGATAGCCGCTCTGGGGATTGTGTTAGAACCTTCAATGGCCACACCGAAACCATCCAGTCTCTTTCCGTTTCTGCCAACCAAGAGTTTCTTGTTTCAGTATCTACTGACGGAACTGCCCGAGTTTTTGAGATTGCAGAATATAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

470

Amino Acids

50.82

Weight (kDa)

4.48

Isoelectric Point (pI)

46.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR5 PF25175 127 - 220 1.7e-15 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 128 - 239 9.2e-17 THOC3 beta-propeller domain
Beta-prop_WDR36-Utp21_1st PF25171 131 - 254 5.1e-07 WDR36/Utp21 first beta-propeller
Beta-prop_WDR3_1st PF25173 131 - 294 3.5e-29 WDR3 first beta-propeller domain
WD40_Gbeta PF25391 135 - 251 1.4e-12 G protein beta WD-40 repeat protein
Beta-prop_WDR75_1st PF23869 137 - 241 3.8e-07 WD repeat-containing protein 75 first beta-propeller
WD40_WDHD1_1st PF24817 144 - 220 8.8e-07 WDHD1 first WD40 domain
WD40_Prp19 PF24814 145 - 308 7.3e-25 Prp19 WD40 domain
WDR55 PF24796 150 - 308 4.1e-10 WDR55
Beta-prop_WDR3_2nd PF25172 175 - 294 9.7e-18 WDR3 second beta-propeller domain
WD40 PF00400 176 - 210 6.3e-09 WD domain, G-beta repeat
WD40_CDC20-Fz PF24807 176 - 353 4.6e-21 CDC20/Fizzy WD40 domain
Beta-prop_TEP1_2nd PF25047 176 - 270 6.7e-11 TEP-1 second beta-propeller
EIF3I PF24805 177 - 261 3.1e-08 EIF3I
Beta-prop_CAF1B_HIR1 PF24105 178 - 253 2e-08 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR5 PF25175 178 - 356 2.3e-42 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 181 - 391 1.4e-36 THOC3 beta-propeller domain
WD40 PF00400 215 - 252 6.8e-06 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 218 - 304 5e-07 CAF1B/HIR1 beta-propeller domain
EIF3I PF24805 221 - 305 9.2e-12 EIF3I
WD40_CDC20-Fz PF24807 230 - 402 1.1e-17 CDC20/Fizzy WD40 domain
WD40_WDHD1_1st PF24817 230 - 308 1.4e-08 WDHD1 first WD40 domain
WD40_Gbeta PF25391 235 - 381 8.6e-15 G protein beta WD-40 repeat protein
Beta-prop_WDR36-Utp21_2nd PF25168 236 - 411 1.3e-13 WDR36/Utp21 second beta-propeller domain
WD40 PF00400 257 - 294 1.5e-08 WD domain, G-beta repeat
Beta-prop_EML PF23409 262 - 461 1.5e-12 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_TEP1_2nd PF25047 264 - 349 7.7e-07 TEP-1 second beta-propeller
Beta-prop_EML_2 PF23414 275 - 364 1.9e-07 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 281 - 421 1.8e-14 WDR36/Utp21 first beta-propeller
Beta-prop_WDR3_2nd PF25172 290 - 384 2.7e-08 WDR3 second beta-propeller domain
Beta-prop_WDR3_1st PF25173 291 - 465 1.6e-31 WDR3 first beta-propeller domain
WD40 PF00400 299 - 337 1e-05 WD domain, G-beta repeat
WD40_Prp19 PF24814 307 - 416 1.1e-13 Prp19 WD40 domain
WD40_Gbeta PF25391 310 - 467 3.1e-13 G protein beta WD-40 repeat protein
EIF3I PF24805 310 - 467 2.6e-13 EIF3I
Beta-prop_WDR5 PF25175 310 - 467 4.7e-30 WDR5 beta-propeller domain
WD40_WDHD1_1st PF24817 311 - 387 7.7e-08 WDHD1 first WD40 domain
NBCH_WD40 PF20426 314 - 383 1.1e-06 Neurobeachin beta propeller domain
Beta-prop_HPS5 PF23756 314 - 440 3e-07 HPS5 beta-propeller
Beta-prop_ACSF4 PF13570 319 - 464 6.2e-09 Beta-alanine-activating enzyme, beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 329 - 458 1.5e-12 WDR36/Utp21 first beta-propeller
Beta-prop_TEP1_2nd PF25047 348 - 464 1.4e-14 TEP-1 second beta-propeller
WD40_CDC20-Fz PF24807 351 - 466 9.6e-15 CDC20/Fizzy WD40 domain
Beta-prop_EML_2 PF23414 361 - 466 6.5e-14 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR90_POC16_2nd PF23393 368 - 467 1.7e-06 WDR90/POC16, second beta-propeller
Beta-prop_WDR3_2nd PF25172 369 - 465 7.6e-14 WDR3 second beta-propeller domain
WDR55 PF24796 370 - 467 2.1e-14 WDR55
Beta-prop_DCAF4 PF23761 377 - 465 7.3e-07 DDB1- and CUL4-associated factor 4 beta-propeller domain
ANAPC4_WD40 PF12894 379 - 443 2.4e-06 Anaphase-promoting complex subunit 4 WD40 domain
Beta-prop_WDR36-Utp21_2nd PF25168 392 - 466 2.1e-08 WDR36/Utp21 second beta-propeller domain
WD40 PF00400 392 - 422 8.9e-08 WD domain, G-beta repeat
Beta-prop_THOC3 PF25174 392 - 466 6.3e-13 THOC3 beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 393 - 467 8e-07 CAF1B/HIR1 beta-propeller domain
WD40_Prp19 PF24814 395 - 465 1.4e-11 Prp19 WD40 domain
WD40_WDHD1_1st PF24817 397 - 467 7.5e-11 WDHD1 first WD40 domain
WD40_MABP1-WDR62_2nd PF24782 406 - 462 9.3e-09 MABP1/WDR62 second WD40 domain
WD40 PF00400 426 - 463 3.3e-07 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 740
AccB7I CCANNNNNTGG 1 cut(s) 890
AccBSI CCGCTC 1 cut(s) 1272
AccIII TCCGGA 1 cut(s) 596
AciI CCGC 8 cut(s) 9, 141, 197, 200, 203, 206, 1239, 1270
AclWI GGATC 1 cut(s) 446
AcoI YGGCCR 2 cut(s) 409, 1300
AcsI RAATTY 1 cut(s) 621
AcuI CTGAAG 1 cut(s) 1011
AcvI CACGTG 1 cut(s) 49
AcyI GRCGYC 1 cut(s) 138
AfaI GTAC 1 cut(s) 574
AfiI CCNNNNNNNGG 3 cut(s) 674, 890, 1276
AflIII ACRYGT 4 cut(s) 46, 399, 944, 1169
AgsI TTSAA 6 cut(s) 74, 536, 620, 969, 1070, 1297
AjnI CCWGG 3 cut(s) 279, 667, 717
AluBI AGCT 8 cut(s) 251, 424, 532, 603, 977, 1049, 1092, 1129
AluI AGCT 8 cut(s) 251, 424, 532, 603, 977, 1049, 1092, 1129
Alw21I GWGCWC 1 cut(s) 227
Alw26I GTCTC 2 cut(s) 224, 1326
AlwI GGATC 1 cut(s) 446
AlwNI CAGNNNCTG 1 cut(s) 1064
Ama87I CYCGRG 1 cut(s) 1380
Aor13HI TCCGGA 1 cut(s) 596
AoxI GGCC 4 cut(s) 409, 790, 1158, 1300
ApeKI GCWGC 3 cut(s) 191, 441, 1103
ApoI RAATTY 1 cut(s) 621
Asp700I GAANNNNTTC 2 cut(s) 342, 900
AspA2I CCTAGG 1 cut(s) 701
AspLEI GCGC 1 cut(s) 196
AspS9I GGNCC 3 cut(s) 665, 715, 1159
AsuC2I CCSGG 1 cut(s) 472
AsuHPI GGTGA 3 cut(s) 431, 827, 911
AvaI CYCGRG 1 cut(s) 1380
AvaII GGWCC 2 cut(s) 665, 715
AvrII CCTAGG 1 cut(s) 701
BalI TGGCCA 2 cut(s) 411, 1302
BbrPI CACGTG 1 cut(s) 49
BbsI GAAGAC 1 cut(s) 279
Bbv12I GWGCWC 1 cut(s) 227
BbvI GCAGC 3 cut(s) 178, 453, 1090
BccI CCATC 7 cut(s) 572, 602, 824, 989, 1178, 1238, 1322
BciT130I CCWGG 3 cut(s) 281, 669, 719
BclI TGATCA 2 cut(s) 103, 358
BcnI CCSGG 1 cut(s) 472
BcoDI GTCTC 2 cut(s) 224, 1326
BfaI CTAG 4 cut(s) 702, 974, 1046, 1226
BfmI CTRYAG 1 cut(s) 439
BglII AGATCT 1 cut(s) 340
BisI GCNGC 9 cut(s) 141, 192, 197, 200, 203, 206, 442, 1104, 1270
BlnI CCTAGG 1 cut(s) 701
BlsI GCNGC 9 cut(s) 142, 193, 198, 201, 204, 207, 443, 1105, 1271
BmcAI AGTACT 1 cut(s) 574
Bme1390I CCNGG 4 cut(s) 281, 472, 669, 719
Bme18I GGWCC 2 cut(s) 665, 715
BmeT110I CYCGRG 1 cut(s) 1380
BmgT120I GGNCC 3 cut(s) 665, 715, 1159
BmiI GGNNCC 2 cut(s) 7, 769
BmrFI CCNGG 4 cut(s) 281, 472, 669, 719
BmsI GCATC 7 cut(s) 224, 340, 602, 706, 718, 850, 1083
BpiI GAAGAC 1 cut(s) 279
BpmI CTGGAG 1 cut(s) 690
BpuMI CCSGG 1 cut(s) 472
BsaAI YACGTR 1 cut(s) 49
BsaHI GRCGYC 1 cut(s) 138
BsaJI CCNNGG 5 cut(s) 280, 471, 701, 793, 1097
BsaWI WCCGGW 1 cut(s) 596
Bsc4I CCNNNNNNNGG 3 cut(s) 674, 890, 1276
Bse118I RCCGGY 1 cut(s) 211
Bse1I ACTGG 6 cut(s) 412, 853, 988, 1030, 1114, 1318
BseAI TCCGGA 1 cut(s) 596
BseBI CCWGG 3 cut(s) 281, 669, 719
BseDI CCNNGG 5 cut(s) 280, 471, 701, 793, 1097
BseGI GGATG 9 cut(s) 215, 593, 613, 634, 697, 753, 1189, 1249, 1314
BseLI CCNNNNNNNGG 3 cut(s) 674, 890, 1276
BseNI ACTGG 6 cut(s) 412, 853, 988, 1030, 1114, 1318
BseXI GCAGC 3 cut(s) 178, 453, 1090
BseYI CCCAGC 1 cut(s) 935
BsgI GTGCAG 1 cut(s) 721
BshFI GGCC 4 cut(s) 411, 792, 1160, 1302
BsiHKAI GWGCWC 1 cut(s) 227
BsiHKCI CYCGRG 1 cut(s) 1380
BsiSI CCGG 3 cut(s) 212, 471, 597
BslI CCNNNNNNNGG 3 cut(s) 674, 890, 1276
BsmAI GTCTC 2 cut(s) 224, 1326
BsmBI CGTCTC 1 cut(s) 224
BsmI GAATGC 2 cut(s) 760, 1076
BsnI GGCC 4 cut(s) 411, 792, 1160, 1302
BsoBI CYCGRG 1 cut(s) 1380
Bsp1286I GDGCHC 1 cut(s) 227
Bsp13I TCCGGA 1 cut(s) 596
Bsp143I GATC 4 cut(s) 103, 340, 358, 451
Bsp19I CCATGG 2 cut(s) 793, 1097
BspACI CCGC 8 cut(s) 9, 141, 197, 200, 203, 206, 1239, 1270
BspANI GGCC 4 cut(s) 411, 792, 1160, 1302
BspEI TCCGGA 1 cut(s) 596
BspHI TCATGA 2 cut(s) 253, 262
BspLI GGNNCC 2 cut(s) 7, 769
BspMAI CTGCAG 1 cut(s) 443
BspPI GGATC 1 cut(s) 446
BsrBI CCGCTC 1 cut(s) 1272
BsrFI RCCGGY 1 cut(s) 211
BsrI ACTGG 6 cut(s) 412, 853, 988, 1030, 1114, 1318
BssAI RCCGGY 1 cut(s) 211
BssECI CCNNGG 5 cut(s) 280, 471, 701, 793, 1097
BssMI GATC 4 cut(s) 103, 340, 358, 451
BssNI GRCGYC 1 cut(s) 138
BssT1I CCWWGG 3 cut(s) 701, 793, 1097
Bst2UI CCWGG 3 cut(s) 281, 669, 719
Bst4CI ACNGT 4 cut(s) 328, 419, 433, 742
Bst6I CTCTTC 1 cut(s) 155
BstACI GRCGYC 1 cut(s) 138
BstBAI YACGTR 1 cut(s) 49
BstC8I GCNNGC 2 cut(s) 591, 1083
BstDSI CCRYGG 2 cut(s) 793, 1097
BstEII GGTNACC 1 cut(s) 917
BstF5I GGATG 9 cut(s) 215, 593, 613, 634, 697, 753, 1189, 1249, 1314
BstHHI GCGC 1 cut(s) 196
BstKTI GATC 4 cut(s) 106, 343, 361, 454
BstMAI GTCTC 2 cut(s) 224, 1326
BstMBI GATC 4 cut(s) 103, 340, 358, 451
BstMWI GCNNNNNNNGC 2 cut(s) 202, 205
BstNI CCWGG 3 cut(s) 281, 669, 719
BstNSI RCATGY 3 cut(s) 948, 1173, 1197
BstPI GGTNACC 1 cut(s) 917
BstSCI CCNGG 4 cut(s) 279, 470, 667, 717
BstSFI CTRYAG 1 cut(s) 439
BstV1I GCAGC 3 cut(s) 178, 453, 1090
BstV2I GAAGAC 1 cut(s) 279
BstX2I RGATCY 2 cut(s) 340, 451
BstXI CCANNNNNNTGG 1 cut(s) 935
BstYI RGATCY 2 cut(s) 340, 451
BsuRI GGCC 4 cut(s) 411, 792, 1160, 1302
BtgI CCRYGG 2 cut(s) 793, 1097
BtsCI GGATG 9 cut(s) 215, 593, 613, 634, 697, 753, 1189, 1249, 1314
BtsIMutI CAGTG 3 cut(s) 324, 405, 846
Cac8I GCNNGC 2 cut(s) 591, 1083
CaiI CAGNNNCTG 1 cut(s) 1064
CciI TCATGA 2 cut(s) 253, 262
CfoI GCGC 1 cut(s) 196
Cfr10I RCCGGY 1 cut(s) 211
Cfr13I GGNCC 3 cut(s) 665, 715, 1159
CseI GACGC 1 cut(s) 146
Csp6I GTAC 1 cut(s) 573
CviQI GTAC 1 cut(s) 573
DpnI GATC 4 cut(s) 105, 342, 360, 453
DpnII GATC 4 cut(s) 103, 340, 358, 451
DrdI GACNNNNNNGTC 1 cut(s) 740
DseDI GACNNNNNNGTC 1 cut(s) 740
EaeI YGGCCR 2 cut(s) 409, 1300
Eam1104I CTCTTC 1 cut(s) 155
EarI CTCTTC 1 cut(s) 155
Eco130I CCWWGG 3 cut(s) 701, 793, 1097
Eco47I GGWCC 2 cut(s) 665, 715
Eco57I CTGAAG 1 cut(s) 1011
Eco72I CACGTG 1 cut(s) 49
Eco88I CYCGRG 1 cut(s) 1380
Eco91I GGTNACC 1 cut(s) 917
EcoO109I RGGNCCY 1 cut(s) 665
EcoO65I GGTNACC 1 cut(s) 917
EcoRII CCWGG 3 cut(s) 279, 667, 717
EcoT14I CCWWGG 3 cut(s) 701, 793, 1097
EcoT22I ATGCAT 1 cut(s) 1076
ErhI CCWWGG 3 cut(s) 701, 793, 1097
Esp3I CGTCTC 1 cut(s) 224
FalI AAGNNNNNCTT 2 cut(s) 1335, 1367
FauI CCCGC 1 cut(s) 1232
FbaI TGATCA 2 cut(s) 103, 358
Fnu4HI GCNGC 9 cut(s) 141, 192, 197, 200, 203, 206, 442, 1104, 1270
FokI GGATG 9 cut(s) 202, 580, 620, 641, 684, 760, 1196, 1256, 1301
Fsp4HI GCNGC 9 cut(s) 141, 192, 197, 200, 203, 206, 442, 1104, 1270
FspBI CTAG 4 cut(s) 702, 974, 1046, 1226
GlaI GCGC 1 cut(s) 195
GluI GCNGC 9 cut(s) 141, 192, 197, 200, 203, 206, 442, 1104, 1270
GsaI CCCAGC 1 cut(s) 939
GsuI CTGGAG 1 cut(s) 690
HaeIII GGCC 4 cut(s) 411, 792, 1160, 1302
HapII CCGG 3 cut(s) 212, 471, 597
HgaI GACGC 1 cut(s) 146
HhaI GCGC 1 cut(s) 196
Hin1I GRCGYC 1 cut(s) 138
Hin6I GCGC 1 cut(s) 194
HinP1I GCGC 1 cut(s) 194
HincII GTYRAC 2 cut(s) 942, 1015
HindII GTYRAC 2 cut(s) 942, 1015
HindIII AAGCTT 2 cut(s) 601, 1127
HinfI GANTC 8 cut(s) 127, 320, 389, 548, 880, 965, 1061, 1257
HpaI GTTAAC 1 cut(s) 942
HpaII CCGG 3 cut(s) 212, 471, 597
HphI GGTGA 3 cut(s) 431, 827, 911
Hpy166II GTNNAC 4 cut(s) 405, 942, 1015, 1175
Hpy188I TCNGA 9 cut(s) 103, 126, 136, 317, 648, 730, 964, 991, 1060
Hpy188III TCNNGA 7 cut(s) 254, 263, 296, 347, 597, 659, 745
Hpy8I GTNNAC 4 cut(s) 405, 942, 1015, 1175
Hpy99I CGWCG 2 cut(s) 140, 1159
HpyAV CCTTC 3 cut(s) 656, 1158, 1303
HpyCH4III ACNGT 4 cut(s) 328, 419, 433, 742
HpyCH4IV ACGT 4 cut(s) 48, 401, 804, 1054
HpyF10VI GCNNNNNNNGC 2 cut(s) 202, 205
HpySE526I ACGT 4 cut(s) 48, 401, 804, 1054
Hsp92I GRCGYC 1 cut(s) 138
HspAI GCGC 1 cut(s) 194
Kpn2I TCCGGA 1 cut(s) 596
Ksp22I TGATCA 2 cut(s) 103, 358
KspAI GTTAAC 1 cut(s) 942
Kzo9I GATC 4 cut(s) 103, 340, 358, 451
Lsp1109I GCAGC 3 cut(s) 178, 453, 1090
LweI GCATC 7 cut(s) 224, 340, 602, 706, 718, 850, 1083
MaeI CTAG 4 cut(s) 702, 974, 1046, 1226
MaeII ACGT 4 cut(s) 48, 401, 804, 1054
MaeIII GTNAC 4 cut(s) 94, 800, 917, 1189
MalI GATC 4 cut(s) 105, 342, 360, 453
MbiI CCGCTC 1 cut(s) 1272
MboI GATC 4 cut(s) 103, 340, 358, 451
MflI RGATCY 2 cut(s) 340, 451
MhlI GDGCHC 1 cut(s) 227
MlsI TGGCCA 2 cut(s) 411, 1302
MluCI AATT 6 cut(s) 115, 504, 559, 612, 621, 1219
MluNI TGGCCA 2 cut(s) 411, 1302
MlyI GAGTC 2 cut(s) 136, 1266
MmeI TCCRAC 2 cut(s) 159, 184
MnlI CCTC 4 cut(s) 482, 665, 724, 1174
Mox20I TGGCCA 2 cut(s) 411, 1302
Mph1103I ATGCAT 1 cut(s) 1076
MroI TCCGGA 1 cut(s) 596
MroXI GAANNNNTTC 2 cut(s) 342, 900
MscI TGGCCA 2 cut(s) 411, 1302
MseI TTAA 3 cut(s) 27, 777, 941
MslI CAYNNNNRTG 3 cut(s) 61, 417, 1182
Msp20I TGGCCA 2 cut(s) 411, 1302
MspI CCGG 3 cut(s) 212, 471, 597
MspR9I CCNGG 4 cut(s) 281, 472, 669, 719
Mva1269I GAATGC 2 cut(s) 760, 1076
MvaI CCWGG 3 cut(s) 281, 669, 719
MwoI GCNNNNNNNGC 2 cut(s) 202, 205
NciI CCSGG 1 cut(s) 472
NcoI CCATGG 2 cut(s) 793, 1097
NdeII GATC 4 cut(s) 103, 340, 358, 451
NlaIV GGNNCC 2 cut(s) 7, 769
NmuCI GTSAC 3 cut(s) 94, 917, 1189
NsiI ATGCAT 1 cut(s) 1076
NspI RCATGY 3 cut(s) 948, 1173, 1197
PagI TCATGA 2 cut(s) 253, 262
PciI ACATGT 2 cut(s) 944, 1169
PctI GAATGC 2 cut(s) 760, 1076
PdmI GAANNNNTTC 2 cut(s) 342, 900
PfeI GAWTC 6 cut(s) 320, 389, 548, 880, 965, 1061
PflMI CCANNNNNTGG 1 cut(s) 890
PfoI TCCNGGA 1 cut(s) 667
PkrI GCNGC 9 cut(s) 142, 193, 198, 201, 204, 207, 443, 1105, 1271
PleI GAGTC 2 cut(s) 135, 1265
PmaCI CACGTG 1 cut(s) 49
PmlI CACGTG 1 cut(s) 49
PpsI GAGTC 2 cut(s) 135, 1265
Ppu21I YACGTR 1 cut(s) 49
PpuMI RGGWCCY 1 cut(s) 665
PscI ACATGT 2 cut(s) 944, 1169
Psp5II RGGWCCY 1 cut(s) 665
Psp6I CCWGG 3 cut(s) 279, 667, 717
PspCI CACGTG 1 cut(s) 49
PspEI GGTNACC 1 cut(s) 917
PspFI CCCAGC 1 cut(s) 935
PspGI CCWGG 3 cut(s) 279, 667, 717
PspN4I GGNNCC 2 cut(s) 7, 769
PspPI GGNCC 3 cut(s) 665, 715, 1159
PspPPI RGGWCCY 1 cut(s) 665
PstI CTGCAG 1 cut(s) 443
PstNI CAGNNNCTG 1 cut(s) 1064
PsuI RGATCY 2 cut(s) 340, 451
RsaI GTAC 1 cut(s) 574
RsaNI GTAC 1 cut(s) 573
RseI CAYNNNNRTG 3 cut(s) 61, 417, 1182
SaqAI TTAA 3 cut(s) 27, 777, 941
SatI GCNGC 9 cut(s) 141, 192, 197, 200, 203, 206, 442, 1104, 1270
Sau3AI GATC 4 cut(s) 103, 340, 358, 451
Sau96I GGNCC 3 cut(s) 665, 715, 1159
ScaI AGTACT 1 cut(s) 574
SchI GAGTC 2 cut(s) 136, 1266
ScrFI CCNGG 4 cut(s) 281, 472, 669, 719
SduI GDGCHC 1 cut(s) 227
SfaNI GCATC 7 cut(s) 224, 340, 602, 706, 718, 850, 1083
SfcI CTRYAG 1 cut(s) 439
SinI GGWCC 2 cut(s) 665, 715
SmiMI CAYNNNNRTG 3 cut(s) 61, 417, 1182
Sse9I AATT 6 cut(s) 115, 504, 559, 612, 621, 1219
SsiI CCGC 8 cut(s) 9, 141, 197, 200, 203, 206, 1239, 1270
SspI AATATT 1 cut(s) 38
SspMI CTAG 4 cut(s) 702, 974, 1046, 1226
StyD4I CCNGG 4 cut(s) 279, 470, 667, 717
StyI CCWWGG 3 cut(s) 701, 793, 1097
TaaI ACNGT 4 cut(s) 328, 419, 433, 742
TaiI ACGT 4 cut(s) 51, 404, 807, 1057
TaqI TCGA 2 cut(s) 660, 1255
TasI AATT 6 cut(s) 115, 504, 559, 612, 621, 1219
TatI WGTACW 1 cut(s) 572
TauI GCSGC 6 cut(s) 143, 199, 202, 205, 208, 1272
TfiI GAWTC 6 cut(s) 320, 389, 548, 880, 965, 1061
Tru1I TTAA 3 cut(s) 27, 777, 941
Tru9I TTAA 3 cut(s) 27, 777, 941
TscAI CASTG 3 cut(s) 331, 412, 853
TseFI GTSAC 3 cut(s) 94, 917, 1189
TseI GCWGC 3 cut(s) 191, 441, 1103
Tsp45I GTSAC 3 cut(s) 94, 917, 1189
TspDTI ATGAA 6 cut(s) 13, 30, 251, 279, 315, 893
TspGWI ACGGA 3 cut(s) 654, 1318, 1386
TspRI CASTG 3 cut(s) 331, 412, 853
Van91I CCANNNNNTGG 1 cut(s) 890
VpaK11BI GGWCC 2 cut(s) 665, 715
XapI RAATTY 1 cut(s) 621
XceI RCATGY 3 cut(s) 948, 1173, 1197
XcmI CCANNNNNNNNNTGG 1 cut(s) 1095
XmaJI CCTAGG 1 cut(s) 701
XmnI GAANNNNTTC 2 cut(s) 342, 900
XspI CTAG 4 cut(s) 702, 974, 1046, 1226
ZrmI AGTACT 1 cut(s) 574
Zsp2I ATGCAT 1 cut(s) 1076
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.