Rroxscaffold_7G00195930

Angio-associated migratory cell

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0001404
Physical Location & Seq
Forward (+)
38532713 .. 38536855
4143 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00195930.1

Sequence Viewer

Length: 1290 bp
ATGAGCAATCCAGGTCATGTTGTTCATGAAGAAGAAGAAGAAGATGATGATGACCAAGGCGAGGTTTACATTGATGAAGCTGACATCCTTAATGAAGTCAATTTCGATGAGGAAGGTCCTCAGTTGTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGCATAAATTATTTATACTGTGTTTGTGAAGTTCTCAATCATGTGTTGTTGGCTGCAGATCTTCCTGATGCAGACGACCAAGTTGTTGATGAGCCTGATGATTCCATGCATACATTTACCGGTCATACGGGTGAACTTTATACAGTTGTCTGCAGTCCGACAGATCCAGTGTTAGTTGCAACAGGGGGTGGAGATGACAGAGGGTTTCTTTGGAAGATTGGACAAGGAGATTGGGCTTCTGAGCTCCAAGGCCATAAGGATTCTGTTTCTAGTTTAGCATTTAGTACTGATGGACAGTTGCTTGCATCTGGAAGCTTGGATGGAATTATTAAAATTTGGGATATAACATCAGCAAATCTAAAAAGCACTCTTGAAGGTCCTGGAGGGGGCATTGAGTGGGTCAGGTGGCATCCTAGAGGGCATCTGGTCTTGGCTGGTTCGGAGGACTCTACAGTTTGGATGTGGAATGGCGACAAAGGTTCCTATCTTCAATTGTTTTCCGGGCATGGTGGTAGCGTGACTTGTGGTGATTTTACCCCCGATGGTAAAACAATCTGTACTGGTTCTAATGATGCAAGTTTGAGAATATGGAACCCAAAAAGTGGAGAGAACATTCATGTGGTACAAGGTCATCCTTACCATTCTGCAGGGTTGACATGCTTGGCAATAAGCTCTGATTCAACTCTAGCTGTTACTGGTTCTGAAGATGGCTCTGTCCATATTGTAAATATAACTACTGGAAAGGTTGTTAGTTCCCTGGCTTCACATTCAGATTCAGTAGAATGTATCGGACTTGCACCAAGTTTCCCTTGGGCTGCAACAGGAGGTATGGATAACAAGCTTATCATCTGGGATTTGCAACATTCGTTGCCCCGTTCTACATGTGACCATGAGGATGGAGTGACATGCTTGACCTGGCTTGGGGTATCTAGGTACCTAGCAACAGGTTGTGCGGATGGGAAGGTCCGATTATGGGATAGTCTCTCTGGTGATTGTGTAAGAACCTTCAATGGGCATGGTGAACCCATTCAGTCTCTCTCTGTATCTGCCAACAAGGACTTCCTTGTTTCAGTATCTACTGATGGAACTGCCCGAGTTTTTGAGATTGAAGAATATAAGCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
WD40

Protein Analysis

429

Amino Acids

45.96

Weight (kDa)

4.37

Isoelectric Point (pI)

39.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_EML PF23409 50 - 213 5e-06 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR5 PF25175 89 - 179 4.8e-17 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 90 - 253 6.1e-30 WDR3 first beta-propeller domain
Beta-prop_SCAP PF24017 91 - 172 8.8e-06 SCAP Beta-propeller
Beta-prop_WDR36-Utp21_1st PF25171 91 - 211 1.5e-07 WDR36/Utp21 first beta-propeller
WD40_Gbeta PF25391 94 - 209 1.7e-13 G protein beta WD-40 repeat protein
Beta-prop_WDR75_1st PF23869 96 - 200 3.1e-07 WD repeat-containing protein 75 first beta-propeller
NBCH_WD40 PF20426 101 - 174 1e-06 Neurobeachin beta propeller domain
WD40_Prp19 PF24814 104 - 266 3.3e-27 Prp19 WD40 domain
WD40_WDHD1_1st PF24817 104 - 179 2.3e-09 WDHD1 first WD40 domain
WDR55 PF24796 106 - 284 3e-12 WDR55
Beta-prop_EML PF23409 125 - 298 2.9e-13 Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_WDR19_1st PF23389 133 - 263 1.2e-06 WDR19 first beta-propeller
WD40_CDC20-Fz PF24807 134 - 216 1.9e-10 CDC20/Fizzy WD40 domain
Beta-prop_TEP1_2nd PF25047 134 - 225 8.4e-10 TEP-1 second beta-propeller
WD40 PF00400 136 - 169 1.3e-11 WD domain, G-beta repeat
Beta-prop_WDR3_2nd PF25172 136 - 253 1.2e-18 WDR3 second beta-propeller domain
Beta-prop_WDR36-Utp21_2nd PF25168 137 - 262 3.3e-12 WDR36/Utp21 second beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 137 - 198 2.2e-06 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR5 PF25175 137 - 266 4.8e-34 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 140 - 350 1.6e-37 THOC3 beta-propeller domain
Beta-prop_Aladin PF25460 141 - 211 2.3e-06 Aladin seven-bladed propeller
Beta-prop_WDR90_POC16_2nd PF23393 156 - 298 1.9e-06 WDR90/POC16, second beta-propeller
EIF3I PF24805 179 - 264 6.5e-11 EIF3I
WD40_Gbeta PF25391 185 - 253 8.4e-08 G protein beta WD-40 repeat protein
WD40_WDHD1_1st PF24817 189 - 267 3.6e-08 WDHD1 first WD40 domain
Beta-prop_CAF1B_HIR1 PF24105 189 - 263 1.6e-06 CAF1B/HIR1 beta-propeller domain
WD40_CDC20-Fz PF24807 189 - 361 7.4e-20 CDC20/Fizzy WD40 domain
Beta-prop_EML_2 PF23414 191 - 317 3.4e-12 Echinoderm microtubule-associated protein second beta-propeller
WD40_Gbeta PF25391 201 - 340 2e-13 G protein beta WD-40 repeat protein
WD40 PF00400 216 - 253 2.3e-08 WD domain, G-beta repeat
Beta-prop_TEP1_2nd PF25047 221 - 317 1.2e-10 TEP-1 second beta-propeller
Beta-prop_EML PF23409 221 - 422 2.8e-12 Echinoderm microtubule-associated protein first beta-propeller
WD40_MABP1-WDR62_2nd PF24782 235 - 321 2.1e-06 MABP1/WDR62 second WD40 domain
Beta-prop_WDR36-Utp21_1st PF25171 240 - 380 1.8e-13 WDR36/Utp21 first beta-propeller
Beta-prop_SCAP PF24017 240 - 390 3.6e-07 SCAP Beta-propeller
Beta-prop_WDR3_1st PF25173 250 - 424 4.3e-30 WDR3 first beta-propeller domain
WD40 PF00400 258 - 296 4.1e-06 WD domain, G-beta repeat
WD40_Gbeta PF25391 259 - 379 2.9e-08 G protein beta WD-40 repeat protein
WD40_Prp19 PF24814 267 - 368 4.7e-11 Prp19 WD40 domain
Beta-prop_WDR5 PF25175 269 - 426 8.2e-28 WDR5 beta-propeller domain
EIF3I PF24805 269 - 428 4.7e-12 EIF3I
Beta-prop_WDR36-Utp21_2nd PF25168 271 - 425 3.2e-15 WDR36/Utp21 second beta-propeller domain
WD40_WDHD1_1st PF24817 271 - 344 8.8e-09 WDHD1 first WD40 domain
NBCH_WD40 PF20426 271 - 344 2.2e-07 Neurobeachin beta propeller domain
Beta-prop_WDR3_2nd PF25172 272 - 340 1.8e-07 WDR3 second beta-propeller domain
Beta-prop_HPS5 PF23756 273 - 379 8.3e-07 HPS5 beta-propeller
Beta-prop_ACSF4 PF13570 278 - 424 4.6e-08 Beta-alanine-activating enzyme, beta-propeller
Beta-prop_TEP1_2nd PF25047 306 - 424 2.4e-15 TEP-1 second beta-propeller
Beta-prop_EML_2 PF23414 320 - 426 1.9e-11 Echinoderm microtubule-associated protein second beta-propeller
WD40_Prp19 PF24814 328 - 426 2.2e-14 Prp19 WD40 domain
Beta-prop_WDR3_2nd PF25172 328 - 423 2.6e-11 WDR3 second beta-propeller domain
Beta-prop_THOC3 PF25174 351 - 427 2.5e-13 THOC3 beta-propeller domain
WD40 PF00400 351 - 381 1.7e-07 WD domain, G-beta repeat
WDR55 PF24796 351 - 426 2.1e-09 WDR55
WD40_CDC20-Fz PF24807 351 - 425 5.3e-09 CDC20/Fizzy WD40 domain
WD40_WDHD1_1st PF24817 356 - 428 5.2e-10 WDHD1 first WD40 domain
WD40_MABP1-WDR62_2nd PF24782 365 - 421 6.9e-08 MABP1/WDR62 second WD40 domain
WD40 PF00400 385 - 422 7.1e-07 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1098
AccB1I GGYRCC 1 cut(s) 1098
AccB7I CCANNNNNTGG 1 cut(s) 767
AciI CCGC 1 cut(s) 1118
AclWI GGATC 1 cut(s) 323
AcsI RAATTY 1 cut(s) 498
AcuI CTGAAG 1 cut(s) 888
AfaI GTAC 4 cut(s) 451, 724, 789, 1100
AfiI CCNNNNNNNGG 6 cut(s) 61, 551, 767, 1086, 1138, 1176
AflIII ACRYGT 1 cut(s) 1046
AgeI ACCGGT 1 cut(s) 284
AgsI TTSAA 5 cut(s) 539, 656, 846, 1174, 1274
AjnI CCWGG 4 cut(s) 10, 544, 921, 1079
AjuI GAANNNNNNNTTGG 2 cut(s) 1208, 1240
AluBI AGCT 6 cut(s) 80, 409, 480, 837, 854, 1006
AluI AGCT 6 cut(s) 80, 409, 480, 837, 854, 1006
Alw21I GWGCWC 1 cut(s) 411
Alw26I GTCTC 3 cut(s) 135, 1151, 1203
AlwI GGATC 1 cut(s) 323
Ama87I CYCGRG 1 cut(s) 1257
AoxI GGCC 1 cut(s) 415
ApeKI GCWGC 2 cut(s) 218, 980
ApoI RAATTY 1 cut(s) 498
AsiGI ACCGGT 1 cut(s) 284
Asp700I GAANNNNTTC 1 cut(s) 1191
Asp718I GGTACC 1 cut(s) 1098
AspS9I GGNCC 3 cut(s) 116, 542, 1129
AsuC2I CCSGG 1 cut(s) 667
AsuHPI GGTGA 4 cut(s) 308, 704, 1166, 1196
AvaI CYCGRG 1 cut(s) 1257
AvaII GGWCC 3 cut(s) 116, 542, 1129
BanI GGYRCC 1 cut(s) 1098
BanII GRGCYC 1 cut(s) 411
Bbv12I GWGCWC 1 cut(s) 411
BbvI GCAGC 2 cut(s) 205, 967
BccI CCATC 7 cut(s) 449, 479, 701, 866, 1055, 1115, 1241
BciT130I CCWGG 4 cut(s) 12, 546, 923, 1081
BcnI CCSGG 1 cut(s) 667
BcoDI GTCTC 3 cut(s) 135, 1151, 1203
BfaI CTAG 5 cut(s) 435, 579, 851, 1095, 1103
BfmI CTRYAG 4 cut(s) 219, 316, 615, 810
BglII AGATCT 1 cut(s) 223
BisI GCNGC 2 cut(s) 219, 981
BlsI GCNGC 2 cut(s) 220, 982
BmcAI AGTACT 1 cut(s) 451
Bme1390I CCNGG 5 cut(s) 12, 546, 667, 923, 1081
Bme18I GGWCC 3 cut(s) 116, 542, 1129
BmeT110I CYCGRG 1 cut(s) 1257
BmgT120I GGNCC 3 cut(s) 116, 542, 1129
BmiI GGNNCC 3 cut(s) 646, 758, 1100
BmrFI CCNGG 5 cut(s) 12, 546, 667, 923, 1081
BmsI GCATC 5 cut(s) 223, 479, 583, 595, 727
BpmI CTGGAG 1 cut(s) 567
BpuMI CCSGG 1 cut(s) 667
BsaJI CCNNGG 4 cut(s) 55, 412, 921, 974
BsaWI WCCGGW 1 cut(s) 284
Bsc4I CCNNNNNNNGG 6 cut(s) 61, 551, 767, 1086, 1138, 1176
Bse118I RCCGGY 1 cut(s) 284
Bse1I ACTGG 4 cut(s) 332, 730, 865, 907
BseBI CCWGG 4 cut(s) 12, 546, 923, 1081
BseDI CCNNGG 4 cut(s) 55, 412, 921, 974
BseGI GGATG 7 cut(s) 84, 490, 574, 630, 796, 1066, 1126
BseLI CCNNNNNNNGG 6 cut(s) 61, 551, 767, 1086, 1138, 1176
BseMII CTCAG 2 cut(s) 134, 396
BseNI ACTGG 4 cut(s) 332, 730, 865, 907
BseXI GCAGC 2 cut(s) 205, 967
BshFI GGCC 1 cut(s) 417
BshNI GGYRCC 1 cut(s) 1098
BshTI ACCGGT 1 cut(s) 284
BsiHKAI GWGCWC 1 cut(s) 411
BsiHKCI CYCGRG 1 cut(s) 1257
BsiSI CCGG 2 cut(s) 285, 666
BslI CCNNNNNNNGG 6 cut(s) 61, 551, 767, 1086, 1138, 1176
BsmAI GTCTC 3 cut(s) 135, 1151, 1203
BsnI GGCC 1 cut(s) 417
BsoBI CYCGRG 1 cut(s) 1257
Bsp1286I GDGCHC 1 cut(s) 411
Bsp143I GATC 2 cut(s) 223, 328
BspACI CCGC 1 cut(s) 1118
BspANI GGCC 1 cut(s) 417
BspCNI CTCAG 2 cut(s) 133, 397
BspHI TCATGA 1 cut(s) 25
BspLI GGNNCC 3 cut(s) 646, 758, 1100
BspMAI CTGCAG 3 cut(s) 223, 320, 814
BspPI GGATC 1 cut(s) 323
BspT107I GGYRCC 1 cut(s) 1098
BsrFI RCCGGY 1 cut(s) 284
BsrI ACTGG 4 cut(s) 332, 730, 865, 907
BssAI RCCGGY 1 cut(s) 284
BssECI CCNNGG 4 cut(s) 55, 412, 921, 974
BssMI GATC 2 cut(s) 223, 328
BssT1I CCWWGG 3 cut(s) 55, 412, 974
Bst2UI CCWGG 4 cut(s) 12, 546, 923, 1081
Bst4CI ACNGT 4 cut(s) 185, 310, 462, 619
BstC8I GCNNGC 1 cut(s) 468
BstDEI CTNAG 2 cut(s) 120, 405
BstF5I GGATG 7 cut(s) 84, 490, 574, 630, 796, 1066, 1126
BstKTI GATC 2 cut(s) 226, 331
BstMAI GTCTC 3 cut(s) 135, 1151, 1203
BstMBI GATC 2 cut(s) 223, 328
BstNI CCWGG 4 cut(s) 12, 546, 923, 1081
BstNSI RCATGY 3 cut(s) 825, 1050, 1074
BstSCI CCNGG 5 cut(s) 10, 544, 665, 921, 1079
BstSFI CTRYAG 4 cut(s) 219, 316, 615, 810
BstV1I GCAGC 2 cut(s) 205, 967
BstX2I RGATCY 2 cut(s) 223, 328
BstXI CCANNNNNNTGG 1 cut(s) 1061
BstYI RGATCY 2 cut(s) 223, 328
BsuRI GGCC 1 cut(s) 417
BtsCI GGATG 7 cut(s) 84, 490, 574, 630, 796, 1066, 1126
BtsIMutI CAGTG 1 cut(s) 339
Cac8I GCNNGC 1 cut(s) 468
CciI TCATGA 1 cut(s) 25
Cfr10I RCCGGY 1 cut(s) 284
Cfr13I GGNCC 3 cut(s) 116, 542, 1129
Csp6I GTAC 4 cut(s) 450, 723, 788, 1099
CspAI ACCGGT 1 cut(s) 284
CviQI GTAC 4 cut(s) 450, 723, 788, 1099
DdeI CTNAG 2 cut(s) 120, 405
DpnI GATC 2 cut(s) 225, 330
DpnII GATC 2 cut(s) 223, 328
Ecl136II GAGCTC 1 cut(s) 409
Eco130I CCWWGG 3 cut(s) 55, 412, 974
Eco24I GRGCYC 1 cut(s) 411
Eco47I GGWCC 3 cut(s) 116, 542, 1129
Eco53kI GAGCTC 1 cut(s) 409
Eco57I CTGAAG 1 cut(s) 888
Eco88I CYCGRG 1 cut(s) 1257
EcoICRI GAGCTC 1 cut(s) 409
EcoO109I RGGNCCY 2 cut(s) 116, 542
EcoRII CCWGG 4 cut(s) 10, 544, 921, 1079
EcoT14I CCWWGG 3 cut(s) 55, 412, 974
EcoT22I ATGCAT 1 cut(s) 276
EcoT38I GRGCYC 1 cut(s) 411
ErhI CCWWGG 3 cut(s) 55, 412, 974
FalI AAGNNNNNCTT 2 cut(s) 958, 990
Fnu4HI GCNGC 2 cut(s) 219, 981
FokI GGATG 7 cut(s) 71, 497, 561, 637, 783, 1073, 1133
FriOI GRGCYC 1 cut(s) 411
Fsp4HI GCNGC 2 cut(s) 219, 981
FspBI CTAG 5 cut(s) 435, 579, 851, 1095, 1103
GluI GCNGC 2 cut(s) 219, 981
GsuI CTGGAG 1 cut(s) 567
HaeIII GGCC 1 cut(s) 417
HapII CCGG 2 cut(s) 285, 666
HincII GTYRAC 1 cut(s) 819
HindII GTYRAC 1 cut(s) 819
HindIII AAGCTT 2 cut(s) 478, 1004
HinfI GANTC 5 cut(s) 266, 425, 611, 842, 938
HpaII CCGG 2 cut(s) 285, 666
HphI GGTGA 4 cut(s) 308, 704, 1166, 1196
Hpy166II GTNNAC 4 cut(s) 67, 299, 819, 1187
Hpy188I TCNGA 8 cut(s) 324, 406, 607, 841, 868, 937, 956, 1133
Hpy188III TCNNGA 4 cut(s) 26, 230, 474, 536
Hpy8I GTNNAC 4 cut(s) 67, 299, 819, 1187
HpyAV CCTTC 4 cut(s) 107, 533, 1120, 1180
HpyCH4III ACNGT 4 cut(s) 185, 310, 462, 619
HpyF3I CTNAG 2 cut(s) 120, 405
KpnI GGTACC 1 cut(s) 1102
Kzo9I GATC 2 cut(s) 223, 328
LmnI GCTCC 1 cut(s) 414
Lsp1109I GCAGC 2 cut(s) 205, 967
LweI GCATC 5 cut(s) 223, 479, 583, 595, 727
MaeI CTAG 5 cut(s) 435, 579, 851, 1095, 1103
MaeIII GTNAC 4 cut(s) 682, 856, 1049, 1066
MalI GATC 2 cut(s) 225, 330
MboI GATC 2 cut(s) 223, 328
MfeI CAATTG 1 cut(s) 656
MflI RGATCY 2 cut(s) 223, 328
MhlI GDGCHC 1 cut(s) 411
MluCI AATT 5 cut(s) 100, 172, 489, 498, 656
MlyI GAGTC 1 cut(s) 605
MmeI TCCRAC 1 cut(s) 347
MnlI CCTC 9 cut(s) 55, 103, 129, 359, 542, 575, 601, 983, 1051
Mph1103I ATGCAT 1 cut(s) 276
MroXI GAANNNNTTC 1 cut(s) 1191
MseI TTAA 2 cut(s) 90, 495
MslI CAYNNNNRTG 3 cut(s) 294, 782, 1059
MspI CCGG 2 cut(s) 285, 666
MspR9I CCNGG 5 cut(s) 12, 546, 667, 923, 1081
MunI CAATTG 1 cut(s) 656
MvaI CCWGG 4 cut(s) 12, 546, 923, 1081
NciI CCSGG 1 cut(s) 667
NdeII GATC 2 cut(s) 223, 328
NlaIV GGNNCC 3 cut(s) 646, 758, 1100
NmuCI GTSAC 3 cut(s) 682, 1049, 1066
NsiI ATGCAT 1 cut(s) 276
NspI RCATGY 3 cut(s) 825, 1050, 1074
PagI TCATGA 1 cut(s) 25
PciI ACATGT 1 cut(s) 1046
PdmI GAANNNNTTC 1 cut(s) 1191
PfeI GAWTC 4 cut(s) 266, 425, 842, 938
PflMI CCANNNNNTGG 1 cut(s) 767
PfoI TCCNGGA 1 cut(s) 544
PinAI ACCGGT 1 cut(s) 284
PkrI GCNGC 2 cut(s) 220, 982
PleI GAGTC 1 cut(s) 605
PpsI GAGTC 1 cut(s) 605
PpuMI RGGWCCY 2 cut(s) 116, 542
PscI ACATGT 1 cut(s) 1046
Psp124BI GAGCTC 1 cut(s) 411
Psp5II RGGWCCY 2 cut(s) 116, 542
Psp6I CCWGG 4 cut(s) 10, 544, 921, 1079
PspGI CCWGG 4 cut(s) 10, 544, 921, 1079
PspN4I GGNNCC 3 cut(s) 646, 758, 1100
PspPI GGNCC 3 cut(s) 116, 542, 1129
PspPPI RGGWCCY 2 cut(s) 116, 542
PstI CTGCAG 3 cut(s) 223, 320, 814
PsuI RGATCY 2 cut(s) 223, 328
RsaI GTAC 4 cut(s) 451, 724, 789, 1100
RsaNI GTAC 4 cut(s) 450, 723, 788, 1099
RseI CAYNNNNRTG 3 cut(s) 294, 782, 1059
SacI GAGCTC 1 cut(s) 411
SaqAI TTAA 2 cut(s) 90, 495
SatI GCNGC 2 cut(s) 219, 981
Sau3AI GATC 2 cut(s) 223, 328
Sau96I GGNCC 3 cut(s) 116, 542, 1129
ScaI AGTACT 1 cut(s) 451
SchI GAGTC 1 cut(s) 605
ScrFI CCNGG 5 cut(s) 12, 546, 667, 923, 1081
SduI GDGCHC 1 cut(s) 411
SfaNI GCATC 5 cut(s) 223, 479, 583, 595, 727
SfcI CTRYAG 4 cut(s) 219, 316, 615, 810
SinI GGWCC 3 cut(s) 116, 542, 1129
SmiMI CAYNNNNRTG 3 cut(s) 294, 782, 1059
Sse9I AATT 5 cut(s) 100, 172, 489, 498, 656
SsiI CCGC 1 cut(s) 1118
SspMI CTAG 5 cut(s) 435, 579, 851, 1095, 1103
SstI GAGCTC 1 cut(s) 411
StyD4I CCNGG 5 cut(s) 10, 544, 665, 921, 1079
StyI CCWWGG 3 cut(s) 55, 412, 974
TaaI ACNGT 4 cut(s) 185, 310, 462, 619
TaqI TCGA 1 cut(s) 105
TasI AATT 5 cut(s) 100, 172, 489, 498, 656
TatI WGTACW 2 cut(s) 449, 722
TfiI GAWTC 4 cut(s) 266, 425, 842, 938
Tru1I TTAA 2 cut(s) 90, 495
Tru9I TTAA 2 cut(s) 90, 495
TscAI CASTG 1 cut(s) 339
TseFI GTSAC 3 cut(s) 682, 1049, 1066
TseI GCWGC 2 cut(s) 218, 980
Tsp45I GTSAC 3 cut(s) 682, 1049, 1066
TspDTI ATGAA 5 cut(s) 14, 42, 90, 108, 770
TspRI CASTG 1 cut(s) 339
Van91I CCANNNNNTGG 1 cut(s) 767
VpaK11BI GGWCC 3 cut(s) 116, 542, 1129
XapI RAATTY 1 cut(s) 498
XceI RCATGY 3 cut(s) 825, 1050, 1074
XcmI CCANNNNNNNNNTGG 1 cut(s) 972
XmnI GAANNNNTTC 1 cut(s) 1191
XspI CTAG 5 cut(s) 435, 579, 851, 1095, 1103
ZrmI AGTACT 1 cut(s) 451
Zsp2I ATGCAT 1 cut(s) 276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.