Prupe.1G007900_v2.0.a1

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000723
Physical Location & Seq
Forward (+)
668255 .. 668929
675 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G007900.1

Sequence Viewer

Length: 675 bp
ATGTTTGGCAGATACAATCTCATGAGTATTAAACTTTCTAGAGTTAAATCTCTCTATGATGCATGCATGCAGGTTGTCAAAAACTCCATGCCACCTTGTTCATCTGTTGTCCGCAACGAAAAAGAGGAGATACCACAGGAGATCTTCACAACTTCACACAAAGATCTTCGAAAAGAAGGCAGTTATTGGCTCGCCAAAACTTCCGAATCATGCTCTGTGGTTGCTGCGCTCATTGCAACAGTTTCATTTGCAACATCAGCAACTGTACCAGGTGGACTAAATGATAAAACTGGTTCACCGGTTTTAGAAGACAAGCCAGCATTCAATGCCTTCACCATCTCATCGCTGCTTTCTCTTTGCTTGTCATTAACTGCCCTGGCCCTCTTTTTTTCGATTATTACGTCTCGATTCAAAGTAGGAGAATTTTCCATCAGCTTGCCTCGGAAACTTTTGCTGGGTTTAACATCACTCTTCGCATCTATAGCTTCCGCGTTAGTCTCATTCTGCACAGGGCATACGTTTCTCCTTAATCAACAACTGAGACACGTGGCATATCCACTATATGCAACAACTTGCATTCCGATCACAATATTCGCTCTTGCCCAACTGCCCCTCTACTATGATCTCGTACAGGGAATCGCCAGAGAGGTTCCACAACAGACCTACATGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001508 GO:0002027 GO:0003008 GO:0003012 GO:0003013 GO:0003015 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0006928 GO:0006936 GO:0006937 GO:0006941 GO:0006942 GO:0007009 GO:0007154 GO:0007165 GO:0007267 GO:0007275 GO:0007507 GO:0008015 GO:0008016 GO:0008092 GO:0008104 GO:0008150 GO:0009893 GO:0009987 GO:0010256 GO:0010468 GO:0010522 GO:0010604 GO:0010628 GO:0010646 GO:0010880 GO:0010881 GO:0010882 GO:0010959 GO:0014704 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0019222 GO:0019722 GO:0019725 GO:0019899 GO:0019900 GO:0019901 GO:0019932 GO:0022898 GO:0023051 GO:0023052 GO:0030001 GO:0030003 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030048 GO:0030054 GO:0030154 GO:0030315 GO:0030507 GO:0030674 GO:0031430 GO:0031647 GO:0031672 GO:0031674 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032879 GO:0032970 GO:0033036 GO:0033292 GO:0033365 GO:0034394 GO:0034613 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035556 GO:0035637 GO:0036309 GO:0036371 GO:0042383 GO:0042391 GO:0042592 GO:0042692 GO:0043034 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043266 GO:0043268 GO:0043269 GO:0043270 GO:0043292 GO:0044057 GO:0044093 GO:0044291 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044459 GO:0044464 GO:0046907 GO:0048193 GO:0048468 GO:0048513 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050821 GO:0050896 GO:0051049 GO:0051050 GO:0051117 GO:0051179 GO:0051234 GO:0051239 GO:0051270 GO:0051279 GO:0051282 GO:0051641 GO:0051649 GO:0051716 GO:0051899 GO:0051924 GO:0051928 GO:0055001 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055117 GO:0060047 GO:0060048 GO:0060090 GO:0060255 GO:0060306 GO:0060307 GO:0060341 GO:0061024 GO:0061061 GO:0061337 GO:0065007 GO:0065008 GO:0065009 GO:0070252 GO:0070296 GO:0070727 GO:0070838 GO:0070972 GO:0071840 GO:0071944 GO:0072359 GO:0072503 GO:0072507 GO:0072511 GO:0072657 GO:0072659 GO:0086001 GO:0086002 GO:0086003 GO:0086004 GO:0086005 GO:0086010 GO:0086012 GO:0086014 GO:0086015 GO:0086018 GO:0086019 GO:0086026 GO:0086046 GO:0086065 GO:0086066 GO:0086070 GO:0086091 GO:0090257 GO:0098590 GO:0098771 GO:0098900 GO:0098901 GO:0098907 GO:0098910 GO:0099080 GO:0099081 GO:0099512 GO:0099623 GO:1901016 GO:1901018 GO:1901019 GO:1901021 GO:1901379 GO:1901381 GO:1903115 GO:1903169 GO:1903522 GO:1903779 GO:1904062 GO:1904064 GO:1904427 GO:1990778 GO:2001257 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 PGG

Protein Analysis

225

Amino Acids

24.61

Weight (kDa)

8.72

Isoelectric Point (pI)

46.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 61
AccII CGCG 1 cut(s) 491
AciI CCGC 2 cut(s) 112, 489
AcsI RAATTY 1 cut(s) 422
AcvI CACGTG 1 cut(s) 547
AfaI GTAC 2 cut(s) 267, 630
AflIII ACRYGT 1 cut(s) 544
AgeI ACCGGT 1 cut(s) 298
AgsI TTSAA 2 cut(s) 325, 412
AjnI CCWGG 2 cut(s) 268, 375
AluBI AGCT 2 cut(s) 435, 485
AluI AGCT 2 cut(s) 435, 485
Alw26I GTCTC 3 cut(s) 408, 502, 535
AlwNI CAGNNNCTG 1 cut(s) 263
AoxI GGCC 1 cut(s) 378
ApeKI GCWGC 2 cut(s) 224, 346
ApoI RAATTY 1 cut(s) 422
AsiGI ACCGGT 1 cut(s) 298
AspLEI GCGC 1 cut(s) 229
AspS9I GGNCC 1 cut(s) 379
AsuHPI GGTGA 2 cut(s) 288, 325
AsuII TTCGAA 1 cut(s) 169
BbrPI CACGTG 1 cut(s) 547
BbsI GAAGAC 1 cut(s) 315
BbvI GCAGC 2 cut(s) 211, 333
BccI CCATC 2 cut(s) 344, 437
BciT130I CCWGG 2 cut(s) 270, 377
BcoDI GTCTC 3 cut(s) 408, 502, 535
BfaI CTAG 1 cut(s) 39
BfmI CTRYAG 1 cut(s) 480
BfuAI ACCTGC 1 cut(s) 61
BglII AGATCT 2 cut(s) 141, 163
BisI GCNGC 2 cut(s) 225, 347
BlsI GCNGC 2 cut(s) 226, 348
Bme1390I CCNGG 2 cut(s) 270, 377
BmgT120I GGNCC 1 cut(s) 379
BmiI GGNNCC 1 cut(s) 651
BmrFI CCNGG 2 cut(s) 270, 377
BmsI GCATC 2 cut(s) 49, 485
BpiI GAAGAC 1 cut(s) 315
Bpu14I TTCGAA 1 cut(s) 169
BsaAI YACGTR 1 cut(s) 547
BsaJI CCNNGG 2 cut(s) 375, 440
BsaWI WCCGGW 1 cut(s) 298
Bse118I RCCGGY 1 cut(s) 298
Bse1I ACTGG 1 cut(s) 295
Bse3DI GCAATG 1 cut(s) 231
BseBI CCWGG 2 cut(s) 270, 377
BseDI CCNNGG 2 cut(s) 375, 440
BseMI GCAATG 1 cut(s) 231
BseMII CTCAG 1 cut(s) 530
BseNI ACTGG 1 cut(s) 295
BseRI GAGGAG 1 cut(s) 140
BseXI GCAGC 2 cut(s) 211, 333
BseYI CCCAGC 1 cut(s) 454
BsgI GTGCAG 1 cut(s) 490
Bsh1236I CGCG 1 cut(s) 491
BshFI GGCC 1 cut(s) 380
BshTI ACCGGT 1 cut(s) 298
BsiSI CCGG 1 cut(s) 299
BsmAI GTCTC 3 cut(s) 408, 502, 535
BsmBI CGTCTC 1 cut(s) 408
BsmI GAATGC 2 cut(s) 320, 576
BsnI GGCC 1 cut(s) 380
Bsp119I TTCGAA 1 cut(s) 169
Bsp143I GATC 4 cut(s) 141, 163, 582, 622
BspACI CCGC 2 cut(s) 112, 489
BspANI GGCC 1 cut(s) 380
BspCNI CTCAG 1 cut(s) 531
BspFNI CGCG 1 cut(s) 491
BspHI TCATGA 1 cut(s) 21
BspLI GGNNCC 1 cut(s) 651
BspMI ACCTGC 1 cut(s) 61
BspT104I TTCGAA 1 cut(s) 169
BsrDI GCAATG 1 cut(s) 231
BsrFI RCCGGY 1 cut(s) 298
BsrI ACTGG 1 cut(s) 295
BssAI RCCGGY 1 cut(s) 298
BssECI CCNNGG 2 cut(s) 375, 440
BssMI GATC 4 cut(s) 141, 163, 582, 622
Bst2UI CCWGG 2 cut(s) 270, 377
Bst4CI ACNGT 2 cut(s) 241, 265
Bst6I CTCTTC 1 cut(s) 476
BstAPI GCANNNNNTGC 1 cut(s) 326
BstBAI YACGTR 1 cut(s) 547
BstBI TTCGAA 1 cut(s) 169
BstC8I GCNNGC 5 cut(s) 64, 68, 192, 318, 437
BstDEI CTNAG 1 cut(s) 539
BstFNI CGCG 1 cut(s) 491
BstHHI GCGC 1 cut(s) 229
BstKTI GATC 4 cut(s) 144, 166, 585, 625
BstMAI GTCTC 3 cut(s) 408, 502, 535
BstMBI GATC 4 cut(s) 141, 163, 582, 622
BstMWI GCNNNNNNNGC 4 cut(s) 233, 257, 326, 482
BstNI CCWGG 2 cut(s) 270, 377
BstNSI RCATGY 2 cut(s) 66, 70
BstSCI CCNGG 2 cut(s) 268, 375
BstSFI CTRYAG 1 cut(s) 480
BstUI CGCG 1 cut(s) 491
BstV1I GCAGC 2 cut(s) 211, 333
BstV2I GAAGAC 1 cut(s) 315
BstX2I RGATCY 2 cut(s) 141, 163
BstYI RGATCY 2 cut(s) 141, 163
BsuRI GGCC 1 cut(s) 380
BtgZI GCGATG 1 cut(s) 327
BveI ACCTGC 1 cut(s) 61
Cac8I GCNNGC 5 cut(s) 64, 68, 192, 318, 437
CaiI CAGNNNCTG 1 cut(s) 263
CciI TCATGA 1 cut(s) 21
CfoI GCGC 1 cut(s) 229
Cfr10I RCCGGY 1 cut(s) 298
Cfr13I GGNCC 1 cut(s) 379
CsiI ACCWGGT 1 cut(s) 268
Csp6I GTAC 2 cut(s) 266, 629
CspAI ACCGGT 1 cut(s) 298
CviAII CATG 6 cut(s) 22, 63, 67, 88, 210, 667
CviJI RGCY 5 cut(s) 190, 316, 380, 435, 485
CviKI_1 RGCY 5 cut(s) 190, 316, 380, 435, 485
CviQI GTAC 2 cut(s) 266, 629
DdeI CTNAG 1 cut(s) 539
DpnI GATC 4 cut(s) 143, 165, 584, 624
DpnII GATC 4 cut(s) 141, 163, 582, 622
Eam1104I CTCTTC 1 cut(s) 476
EarI CTCTTC 1 cut(s) 476
Eco72I CACGTG 1 cut(s) 547
EcoRII CCWGG 2 cut(s) 268, 375
EcoT22I ATGCAT 2 cut(s) 64, 68
Esp3I CGTCTC 1 cut(s) 408
FaeI CATG 6 cut(s) 25, 66, 70, 91, 213, 670
FatI CATG 6 cut(s) 21, 62, 66, 87, 209, 666
Fnu4HI GCNGC 2 cut(s) 225, 347
Fsp4HI GCNGC 2 cut(s) 225, 347
FspBI CTAG 1 cut(s) 39
GlaI GCGC 1 cut(s) 228
GluI GCNGC 2 cut(s) 225, 347
GsaI CCCAGC 1 cut(s) 458
HaeIII GGCC 1 cut(s) 380
HapII CCGG 1 cut(s) 299
HhaI GCGC 1 cut(s) 229
Hin1II CATG 6 cut(s) 25, 66, 70, 91, 213, 670
Hin6I GCGC 1 cut(s) 227
HinP1I GCGC 1 cut(s) 227
HinfI GANTC 3 cut(s) 206, 408, 636
HpaII CCGG 1 cut(s) 299
HphI GGTGA 2 cut(s) 288, 325
Hpy166II GTNNAC 2 cut(s) 275, 296
Hpy188I TCNGA 3 cut(s) 205, 444, 582
Hpy188III TCNNGA 3 cut(s) 22, 39, 405
Hpy8I GTNNAC 2 cut(s) 275, 296
HpyAV CCTTC 2 cut(s) 170, 340
HpyCH4III ACNGT 2 cut(s) 241, 265
HpyCH4IV ACGT 3 cut(s) 401, 518, 546
HpyCH4V TGCA 8 cut(s) 62, 66, 70, 236, 251, 507, 566, 576
HpyF10VI GCNNNNNNNGC 4 cut(s) 233, 257, 326, 482
HpyF3I CTNAG 1 cut(s) 539
HpySE526I ACGT 3 cut(s) 401, 518, 546
Hsp92II CATG 6 cut(s) 25, 66, 70, 91, 213, 670
HspAI GCGC 1 cut(s) 227
Kzo9I GATC 4 cut(s) 141, 163, 582, 622
Lsp1109I GCAGC 2 cut(s) 211, 333
LweI GCATC 2 cut(s) 49, 485
MabI ACCWGGT 1 cut(s) 268
MaeI CTAG 1 cut(s) 39
MaeII ACGT 3 cut(s) 401, 518, 546
MalI GATC 4 cut(s) 143, 165, 584, 624
MboI GATC 4 cut(s) 141, 163, 582, 622
MboII GAAGA 4 cut(s) 136, 158, 320, 463
MflI RGATCY 2 cut(s) 141, 163
MluCI AATT 1 cut(s) 422
MnlI CCTC 5 cut(s) 118, 392, 450, 623, 640
Mph1103I ATGCAT 2 cut(s) 64, 68
MseI TTAA 5 cut(s) 30, 45, 368, 461, 528
MspI CCGG 1 cut(s) 299
MspR9I CCNGG 2 cut(s) 270, 377
Mva1269I GAATGC 2 cut(s) 320, 576
MvaI CCWGG 2 cut(s) 270, 377
MvnI CGCG 1 cut(s) 491
MwoI GCNNNNNNNGC 4 cut(s) 233, 257, 326, 482
NdeII GATC 4 cut(s) 141, 163, 582, 622
NlaIII CATG 6 cut(s) 25, 66, 70, 91, 213, 670
NlaIV GGNNCC 1 cut(s) 651
NsiI ATGCAT 2 cut(s) 64, 68
NspI RCATGY 2 cut(s) 66, 70
NspV TTCGAA 1 cut(s) 169
PaeI GCATGC 2 cut(s) 66, 70
PagI TCATGA 1 cut(s) 21
PcsI WCGNNNNNNNCGW 1 cut(s) 398
PctI GAATGC 2 cut(s) 320, 576
PfeI GAWTC 3 cut(s) 206, 408, 636
PinAI ACCGGT 1 cut(s) 298
PkrI GCNGC 2 cut(s) 226, 348
PmaCI CACGTG 1 cut(s) 547
PmlI CACGTG 1 cut(s) 547
Ppu21I YACGTR 1 cut(s) 547
Psp6I CCWGG 2 cut(s) 268, 375
PspCI CACGTG 1 cut(s) 547
PspFI CCCAGC 1 cut(s) 454
PspGI CCWGG 2 cut(s) 268, 375
PspN4I GGNNCC 1 cut(s) 651
PspPI GGNCC 1 cut(s) 379
PstNI CAGNNNCTG 1 cut(s) 263
PsuI RGATCY 2 cut(s) 141, 163
RsaI GTAC 2 cut(s) 267, 630
RsaNI GTAC 2 cut(s) 266, 629
SaqAI TTAA 5 cut(s) 30, 45, 368, 461, 528
SatI GCNGC 2 cut(s) 225, 347
Sau3AI GATC 4 cut(s) 141, 163, 582, 622
Sau96I GGNCC 1 cut(s) 379
ScrFI CCNGG 2 cut(s) 270, 377
SexAI ACCWGGT 1 cut(s) 268
SfaNI GCATC 2 cut(s) 49, 485
SfcI CTRYAG 1 cut(s) 480
SfuI TTCGAA 1 cut(s) 169
SphI GCATGC 2 cut(s) 66, 70
Sse9I AATT 1 cut(s) 422
SsiI CCGC 2 cut(s) 112, 489
SspI AATATT 1 cut(s) 591
SspMI CTAG 1 cut(s) 39
StyD4I CCNGG 2 cut(s) 268, 375
TaaI ACNGT 2 cut(s) 241, 265
TaiI ACGT 3 cut(s) 404, 521, 549
TaqI TCGA 3 cut(s) 169, 392, 406
TasI AATT 1 cut(s) 422
TfiI GAWTC 3 cut(s) 206, 408, 636
Tru1I TTAA 5 cut(s) 30, 45, 368, 461, 528
Tru9I TTAA 5 cut(s) 30, 45, 368, 461, 528
TseI GCWGC 2 cut(s) 224, 346
TspDTI ATGAA 2 cut(s) 90, 234
XapI RAATTY 1 cut(s) 422
XbaI TCTAGA 1 cut(s) 38
XceI RCATGY 2 cut(s) 66, 70
XspI CTAG 1 cut(s) 39
Zsp2I ATGCAT 2 cut(s) 64, 68
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.