Rh6DG320600

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000723
Physical Location & Seq
Reverse (-)
52375568 .. 52375867
300 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG320600.1

Sequence Viewer

Length: 300 bp
ATGTCTTCTGCCACAAATACCATGACAGGCGCGGACAGTGAGAGCATGGACAGTGAGAGCATCAAGAAATACTTGTTCCAGACAGCCATGAAAAGCAAATGGAAAGAAGTTGTCCGAGCATATAAGAAAAACAAGCTGGCTCACAAGGCAAGGATCACCAAGTCAGGTGACACGGCATTGCACATAGCAGTGTTAGACGGCCAAGAGGAACGTGTTGAAGAACTAGTAAACCAGGTTTCCATAGAGGACCTGAAACTCCAAAACAAGCGAGGGAATTCGCTGCAGCACAAGGGAATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0000166 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006888 GO:0006900 GO:0006901 GO:0006903 GO:0006915 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0006996 GO:0007154 GO:0007165 GO:0007166 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0008625 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010469 GO:0010506 GO:0010508 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010646 GO:0010648 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012501 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017075 GO:0017076 GO:0017148 GO:0019222 GO:0019538 GO:0019905 GO:0022607 GO:0022898 GO:0023051 GO:0023052 GO:0023057 GO:0030162 GO:0030554 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032270 GO:0032409 GO:0032412 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033194 GO:0033554 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034599 GO:0034762 GO:0034765 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0042221 GO:0042802 GO:0042981 GO:0043065 GO:0043066 GO:0043067 GO:0043068 GO:0043069 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043269 GO:0043280 GO:0043281 GO:0043412 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045862 GO:0046777 GO:0046907 GO:0048193 GO:0048194 GO:0048199 GO:0048207 GO:0048208 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051248 GO:0051336 GO:0051345 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0060548 GO:0061024 GO:0065003 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071447 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090114 GO:0097159 GO:0097190 GO:0097191 GO:0097367 GO:0099601 GO:0140096 GO:1900449 GO:1901265 GO:1901363 GO:1901564 GO:1901700 GO:1901701 GO:1902041 GO:1902042 GO:1904062 GO:2000112 GO:2000113 GO:2000116 GO:2000310 GO:2001056 GO:2001233 GO:2001234 GO:2001236 GO:2001237 GO:2001257
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

99

Amino Acids

11.14

Weight (kDa)

9.4

Isoelectric Point (pI)

51.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 32
AciI CCGC 1 cut(s) 32
AclWI GGATC 1 cut(s) 161
AcoI YGGCCR 1 cut(s) 199
AcsI RAATTY 1 cut(s) 274
AflIII ACRYGT 1 cut(s) 211
AgsI TTSAA 1 cut(s) 218
AhlI ACTAGT 1 cut(s) 223
AjnI CCWGG 1 cut(s) 231
AluBI AGCT 1 cut(s) 136
AluI AGCT 1 cut(s) 136
AlwI GGATC 1 cut(s) 161
AoxI GGCC 1 cut(s) 199
ApeKI GCWGC 2 cut(s) 280, 283
ApoI RAATTY 1 cut(s) 274
AspLEI GCGC 1 cut(s) 32
AspS9I GGNCC 1 cut(s) 247
AsuHPI GGTGA 2 cut(s) 148, 179
AvaII GGWCC 1 cut(s) 247
BbvI GCAGC 2 cut(s) 267, 295
BceAI ACGGC 2 cut(s) 189, 214
BciT130I CCWGG 1 cut(s) 233
BcuI ACTAGT 1 cut(s) 223
BfaI CTAG 1 cut(s) 224
BfmI CTRYAG 1 cut(s) 281
BisI GCNGC 2 cut(s) 281, 284
BlsI GCNGC 2 cut(s) 282, 285
Bme1390I CCNGG 1 cut(s) 233
Bme18I GGWCC 1 cut(s) 247
BmgT120I GGNCC 1 cut(s) 247
BmrFI CCNGG 1 cut(s) 233
BmsI GCATC 1 cut(s) 69
Bse3DI GCAATG 1 cut(s) 176
BseBI CCWGG 1 cut(s) 233
BseMI GCAATG 1 cut(s) 176
BseXI GCAGC 2 cut(s) 267, 295
Bsh1236I CGCG 1 cut(s) 32
BshFI GGCC 1 cut(s) 201
BsnI GGCC 1 cut(s) 201
Bsp143I GATC 1 cut(s) 153
BspACI CCGC 1 cut(s) 32
BspANI GGCC 1 cut(s) 201
BspFNI CGCG 1 cut(s) 32
BspMAI CTGCAG 1 cut(s) 285
BspPI GGATC 1 cut(s) 161
BsrDI GCAATG 1 cut(s) 176
BssMI GATC 1 cut(s) 153
Bst2UI CCWGG 1 cut(s) 233
Bst4CI ACNGT 2 cut(s) 38, 53
BstC8I GCNNGC 1 cut(s) 138
BstFNI CGCG 1 cut(s) 32
BstHHI GCGC 1 cut(s) 32
BstKTI GATC 1 cut(s) 156
BstMBI GATC 1 cut(s) 153
BstMWI GCNNNNNNNGC 1 cut(s) 146
BstNI CCWGG 1 cut(s) 233
BstSCI CCNGG 1 cut(s) 231
BstSFI CTRYAG 1 cut(s) 281
BstUI CGCG 1 cut(s) 32
BstV1I GCAGC 2 cut(s) 267, 295
BsuRI GGCC 1 cut(s) 201
BtsI GCAGTG 1 cut(s) 195
BtsIMutI CAGTG 3 cut(s) 43, 58, 195
Cac8I GCNNGC 1 cut(s) 138
CfoI GCGC 1 cut(s) 32
Cfr13I GGNCC 1 cut(s) 247
CsiI ACCWGGT 1 cut(s) 231
CviAII CATG 3 cut(s) 22, 46, 88
CviJI RGCY 4 cut(s) 86, 136, 140, 201
CviKI_1 RGCY 4 cut(s) 86, 136, 140, 201
DpnI GATC 1 cut(s) 155
DpnII GATC 1 cut(s) 153
EaeI YGGCCR 1 cut(s) 199
Eco47I GGWCC 1 cut(s) 247
EcoO109I RGGNCCY 1 cut(s) 247
EcoRI GAATTC 1 cut(s) 274
EcoRII CCWGG 1 cut(s) 231
FaeI CATG 3 cut(s) 25, 49, 91
FaiI YATR 7 cut(s) 23, 47, 89, 121, 123, 185, 242
FalI AAGNNNNNCTT 2 cut(s) 56, 88
FatI CATG 3 cut(s) 21, 45, 87
Fnu4HI GCNGC 2 cut(s) 281, 284
Fsp4HI GCNGC 2 cut(s) 281, 284
FspBI CTAG 1 cut(s) 224
GlaI GCGC 1 cut(s) 31
GluI GCNGC 2 cut(s) 281, 284
HaeIII GGCC 1 cut(s) 201
HhaI GCGC 1 cut(s) 32
Hin1II CATG 3 cut(s) 25, 49, 91
Hin6I GCGC 1 cut(s) 30
HinP1I GCGC 1 cut(s) 30
HphI GGTGA 2 cut(s) 148, 179
Hpy166II GTNNAC 1 cut(s) 229
Hpy188I TCNGA 1 cut(s) 116
Hpy188III TCNNGA 2 cut(s) 64, 79
Hpy8I GTNNAC 1 cut(s) 229
HpyCH4III ACNGT 2 cut(s) 38, 53
HpyCH4IV ACGT 1 cut(s) 211
HpyCH4V TGCA 2 cut(s) 181, 283
HpyF10VI GCNNNNNNNGC 1 cut(s) 146
HpySE526I ACGT 1 cut(s) 211
Hsp92II CATG 3 cut(s) 25, 49, 91
HspAI GCGC 1 cut(s) 30
Kzo9I GATC 1 cut(s) 153
LpnPI CCDG 7 cut(s) 12, 92, 122, 150, 218, 245, 263
Lsp1109I GCAGC 2 cut(s) 267, 295
LweI GCATC 1 cut(s) 69
MabI ACCWGGT 1 cut(s) 231
MaeI CTAG 1 cut(s) 224
MaeII ACGT 1 cut(s) 211
MaeIII GTNAC 1 cut(s) 167
MalI GATC 1 cut(s) 155
MboI GATC 1 cut(s) 153
MboII GAAGA 1 cut(s) 230
MluCI AATT 1 cut(s) 274
MnlI CCTC 3 cut(s) 199, 238, 263
MslI CAYNNNNRTG 1 cut(s) 188
MspR9I CCNGG 1 cut(s) 233
MvaI CCWGG 1 cut(s) 233
MvnI CGCG 1 cut(s) 32
MwoI GCNNNNNNNGC 1 cut(s) 146
NdeII GATC 1 cut(s) 153
NlaIII CATG 3 cut(s) 25, 49, 91
NmuCI GTSAC 1 cut(s) 167
PkrI GCNGC 2 cut(s) 282, 285
PpuMI RGGWCCY 1 cut(s) 247
Psp5II RGGWCCY 1 cut(s) 247
Psp6I CCWGG 1 cut(s) 231
PspGI CCWGG 1 cut(s) 231
PspPI GGNCC 1 cut(s) 247
PspPPI RGGWCCY 1 cut(s) 247
PstI CTGCAG 1 cut(s) 285
RseI CAYNNNNRTG 1 cut(s) 188
SatI GCNGC 2 cut(s) 281, 284
Sau3AI GATC 1 cut(s) 153
Sau96I GGNCC 1 cut(s) 247
ScrFI CCNGG 1 cut(s) 233
SetI ASST 5 cut(s) 138, 169, 214, 237, 252
SexAI ACCWGGT 1 cut(s) 231
SfaNI GCATC 1 cut(s) 69
SfcI CTRYAG 1 cut(s) 281
SinI GGWCC 1 cut(s) 247
SmiMI CAYNNNNRTG 1 cut(s) 188
SpeI ACTAGT 1 cut(s) 223
Sse9I AATT 1 cut(s) 274
SsiI CCGC 1 cut(s) 32
SspMI CTAG 1 cut(s) 224
StyD4I CCNGG 1 cut(s) 231
TaaI ACNGT 2 cut(s) 38, 53
TaiI ACGT 1 cut(s) 214
TasI AATT 1 cut(s) 274
TscAI CASTG 3 cut(s) 43, 58, 195
TseFI GTSAC 1 cut(s) 167
TseI GCWGC 2 cut(s) 280, 283
Tsp45I GTSAC 1 cut(s) 167
TspDTI ATGAA 1 cut(s) 104
TspRI CASTG 3 cut(s) 43, 58, 195
VpaK11BI GGWCC 1 cut(s) 247
XapI RAATTY 1 cut(s) 274
XspI CTAG 1 cut(s) 224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.