pycom11g24680

ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
27602551 .. 27603153
603 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g24680.1

Sequence Viewer

Length: 603 bp
ATGCCACCACACTTCTTTGTGCGCTTCAATAACGACAACAAGACTCCGAAGGACATCTTCAAAGAAACCCACAAAGGGCTCGTGAAAGACGGAAGGGAATGGCTCACCAAGGCCTCTGAGTCCTGCTCCGTAATGGGTGCCCTCATCGCCACTGTCGCCTTTGCAACTGCAACAACTGTTCCTGGTGGCATCAAGGAGGTTACAGGAAGACCAACCCTCGAAAACTTACCAGTTTTTGACATCTTCGCCATCTCATCGCTCTTTGCCCTATGCTCCTCGGTCACGTCCATGGTCATATTCCTGTCCATCCTCATGTCCCGGTACCAAGACAAGGACTTCAGGAAAGAGCTGCCGAGTAAGCTTTTGCTTGGATTGACATTGCTTTTCGTATCAATGGTTTCCATGTTGATTTCATTTTGTGCAGGACATTTCTTTATGCTTAAAGATAAGCTCAAACATGCTGCATTTCCGGTTTATGCAATAACGTGCATGCCTTTAGCAATTTTTGCTGTAGGCCACTTCCCATTGTATTTTAACATGATATTGGCTAACTTTAAAAAGGTTCCATTCGACAGCGGAGTCACAAGGGTAGCTCCTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0000166 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006888 GO:0006900 GO:0006901 GO:0006903 GO:0006915 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0006996 GO:0007154 GO:0007165 GO:0007166 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0008625 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010469 GO:0010506 GO:0010508 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010646 GO:0010648 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012501 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017075 GO:0017076 GO:0017148 GO:0019222 GO:0019538 GO:0019905 GO:0022607 GO:0022898 GO:0023051 GO:0023052 GO:0023057 GO:0030162 GO:0030554 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032270 GO:0032409 GO:0032412 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033194 GO:0033554 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034599 GO:0034762 GO:0034765 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0042221 GO:0042802 GO:0042981 GO:0043065 GO:0043066 GO:0043067 GO:0043068 GO:0043069 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043269 GO:0043280 GO:0043281 GO:0043412 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045862 GO:0046777 GO:0046907 GO:0048193 GO:0048194 GO:0048199 GO:0048207 GO:0048208 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051248 GO:0051336 GO:0051345 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0060548 GO:0061024 GO:0065003 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071447 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090114 GO:0097159 GO:0097190 GO:0097191 GO:0097367 GO:0099601 GO:0140096 GO:1900449 GO:1901265 GO:1901363 GO:1901564 GO:1901700 GO:1901701 GO:1902041 GO:1902042 GO:1904062 GO:2000112 GO:2000113 GO:2000116 GO:2000310 GO:2001056 GO:2001233 GO:2001234 GO:2001236 GO:2001237 GO:2001257
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

201

Amino Acids

22.21

Weight (kDa)

9.34

Isoelectric Point (pI)

34.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PGG PF13962 33 - 145 1.8e-27 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 578
Acc65I GGTACC 1 cut(s) 321
AccB1I GGYRCC 2 cut(s) 137, 321
AciI CCGC 1 cut(s) 576
AcuI CTGAAG 1 cut(s) 322
AfaI GTAC 1 cut(s) 323
AfiI CCNNNNNNNGG 2 cut(s) 75, 331
AgsI TTSAA 2 cut(s) 28, 61
AjiI CACGTC 1 cut(s) 285
AjnI CCWGG 1 cut(s) 181
AluBI AGCT 4 cut(s) 349, 361, 451, 593
AluI AGCT 4 cut(s) 349, 361, 451, 593
AoxI GGCC 2 cut(s) 111, 514
ApeKI GCWGC 2 cut(s) 349, 461
Asp718I GGTACC 1 cut(s) 321
AspLEI GCGC 1 cut(s) 24
AsuC2I CCSGG 1 cut(s) 319
AsuHPI GGTGA 1 cut(s) 97
BaeGI GKGCMC 1 cut(s) 142
BanI GGYRCC 2 cut(s) 137, 321
BanII GRGCYC 1 cut(s) 81
BauI CACGAG 1 cut(s) 80
BbsI GAAGAC 1 cut(s) 214
BbvI GCAGC 2 cut(s) 336, 448
BccI CCATC 2 cut(s) 257, 314
BciT130I CCWGG 1 cut(s) 183
BcnI CCSGG 1 cut(s) 319
BfmI CTRYAG 1 cut(s) 510
BisI GCNGC 2 cut(s) 350, 462
BlsI GCNGC 2 cut(s) 351, 463
Bme1390I CCNGG 2 cut(s) 183, 319
BmgBI CACGTC 1 cut(s) 285
BmiI GGNNCC 3 cut(s) 139, 323, 564
BmrFI CCNGG 2 cut(s) 183, 319
BmsI GCATC 1 cut(s) 198
BpiI GAAGAC 1 cut(s) 214
BplI GAGNNNNNCTC 2 cut(s) 110, 142
BpuMI CCSGG 1 cut(s) 319
BsaJI CCNNGG 3 cut(s) 108, 276, 288
BsaWI WCCGGW 1 cut(s) 469
Bsc4I CCNNNNNNNGG 2 cut(s) 75, 331
Bse1I ACTGG 1 cut(s) 230
Bse3DI GCAATG 1 cut(s) 377
BseBI CCWGG 1 cut(s) 183
BseDI CCNNGG 3 cut(s) 108, 276, 288
BseGI GGATG 1 cut(s) 306
BseLI CCNNNNNNNGG 2 cut(s) 75, 331
BseMI GCAATG 1 cut(s) 377
BseMII CTCAG 1 cut(s) 108
BseNI ACTGG 1 cut(s) 230
BseRI GAGGAG 2 cut(s) 265, 585
BseSI GKGCMC 1 cut(s) 142
BseXI GCAGC 2 cut(s) 336, 448
BsgI GTGCAG 1 cut(s) 441
BshFI GGCC 2 cut(s) 113, 516
BshNI GGYRCC 2 cut(s) 137, 321
BsiSI CCGG 2 cut(s) 319, 470
BslFI GGGAC 1 cut(s) 301
BslI CCNNNNNNNGG 2 cut(s) 75, 331
BsmFI GGGAC 1 cut(s) 301
BsnI GGCC 2 cut(s) 113, 516
Bsp1286I GDGCHC 2 cut(s) 81, 142
Bsp19I CCATGG 1 cut(s) 288
BspACI CCGC 1 cut(s) 576
BspANI GGCC 2 cut(s) 113, 516
BspCNI CTCAG 1 cut(s) 109
BspLI GGNNCC 3 cut(s) 139, 323, 564
BspT107I GGYRCC 2 cut(s) 137, 321
BsrDI GCAATG 1 cut(s) 377
BsrI ACTGG 1 cut(s) 230
BssECI CCNNGG 3 cut(s) 108, 276, 288
BssSI CACGAG 1 cut(s) 80
BssT1I CCWWGG 2 cut(s) 108, 288
Bst2BI CACGAG 1 cut(s) 80
Bst2UI CCWGG 1 cut(s) 183
Bst4CI ACNGT 2 cut(s) 154, 178
BstAPI GCANNNNNTGC 1 cut(s) 506
BstC8I GCNNGC 1 cut(s) 491
BstDEI CTNAG 1 cut(s) 117
BstDSI CCRYGG 1 cut(s) 288
BstF5I GGATG 1 cut(s) 306
BstHHI GCGC 1 cut(s) 24
BstMWI GCNNNNNNNGC 4 cut(s) 146, 155, 358, 506
BstNI CCWGG 1 cut(s) 183
BstNSI RCATGY 2 cut(s) 461, 493
BstSCI CCNGG 2 cut(s) 181, 317
BstSFI CTRYAG 1 cut(s) 510
BstSLI GKGCMC 1 cut(s) 142
BstV1I GCAGC 2 cut(s) 336, 448
BstV2I GAAGAC 1 cut(s) 214
BsuRI GGCC 2 cut(s) 113, 516
BtgI CCRYGG 1 cut(s) 288
BtgZI GCGATG 2 cut(s) 130, 240
BtrI CACGTC 1 cut(s) 285
BtsCI GGATG 1 cut(s) 306
BtsIMutI CAGTG 1 cut(s) 150
Cac8I GCNNGC 1 cut(s) 491
CfoI GCGC 1 cut(s) 24
Csp6I GTAC 1 cut(s) 322
CviAII CATG 6 cut(s) 289, 313, 403, 458, 490, 538
CviJI RGCY 9 cut(s) 79, 103, 113, 349, 361, 451, 516, 548, 593
CviKI_1 RGCY 9 cut(s) 79, 103, 113, 349, 361, 451, 516, 548, 593
CviQI GTAC 1 cut(s) 322
DdeI CTNAG 1 cut(s) 117
DraI TTTAAA 1 cut(s) 556
DrdI GACNNNNNNGTC 1 cut(s) 578
DseDI GACNNNNNNGTC 1 cut(s) 578
Eco130I CCWWGG 2 cut(s) 108, 288
Eco147I AGGCCT 1 cut(s) 113
Eco24I GRGCYC 1 cut(s) 81
Eco57I CTGAAG 1 cut(s) 322
EcoRII CCWGG 1 cut(s) 181
EcoT14I CCWWGG 2 cut(s) 108, 288
EcoT38I GRGCYC 1 cut(s) 81
ErhI CCWWGG 2 cut(s) 108, 288
FaeI CATG 6 cut(s) 292, 316, 406, 461, 493, 541
FalI AAGNNNNNCTT 2 cut(s) 41, 73
FaqI GGGAC 1 cut(s) 301
FatI CATG 6 cut(s) 288, 312, 402, 457, 489, 537
Fnu4HI GCNGC 2 cut(s) 350, 462
FokI GGATG 1 cut(s) 293
FriOI GRGCYC 1 cut(s) 81
Fsp4HI GCNGC 2 cut(s) 350, 462
GlaI GCGC 1 cut(s) 23
GluI GCNGC 2 cut(s) 350, 462
HaeIII GGCC 2 cut(s) 113, 516
HapII CCGG 2 cut(s) 319, 470
HhaI GCGC 1 cut(s) 24
Hin1II CATG 6 cut(s) 292, 316, 406, 461, 493, 541
Hin6I GCGC 1 cut(s) 22
HinP1I GCGC 1 cut(s) 22
HindIII AAGCTT 1 cut(s) 359
HinfI GANTC 3 cut(s) 43, 119, 579
HpaII CCGG 2 cut(s) 319, 470
HphI GGTGA 1 cut(s) 97
Hpy188I TCNGA 2 cut(s) 48, 118
Hpy188III TCNNGA 2 cut(s) 82, 340
HpyAV CCTTC 2 cut(s) 43, 87
HpyCH4III ACNGT 2 cut(s) 154, 178
HpyCH4IV ACGT 2 cut(s) 284, 485
HpyCH4V TGCA 6 cut(s) 164, 170, 422, 464, 479, 489
HpyF10VI GCNNNNNNNGC 4 cut(s) 146, 155, 358, 506
HpyF3I CTNAG 1 cut(s) 117
HpySE526I ACGT 2 cut(s) 284, 485
Hsp92II CATG 6 cut(s) 292, 316, 406, 461, 493, 541
HspAI GCGC 1 cut(s) 22
KpnI GGTACC 1 cut(s) 325
LmnI GCTCC 3 cut(s) 131, 278, 598
Lsp1109I GCAGC 2 cut(s) 336, 448
LweI GCATC 1 cut(s) 198
MaeII ACGT 2 cut(s) 284, 485
MaeIII GTNAC 3 cut(s) 199, 280, 580
MboII GAAGA 3 cut(s) 49, 219, 235
MhlI GDGCHC 2 cut(s) 81, 142
MluCI AATT 1 cut(s) 501
MlyI GAGTC 3 cut(s) 37, 128, 588
MnlI CCTC 6 cut(s) 124, 152, 190, 227, 286, 320
MseI TTAA 3 cut(s) 441, 534, 555
MslI CAYNNNNRTG 2 cut(s) 287, 311
MspA1I CMGCKG 1 cut(s) 576
MspI CCGG 2 cut(s) 319, 470
MspR9I CCNGG 2 cut(s) 183, 319
MvaI CCWGG 1 cut(s) 183
MwoI GCNNNNNNNGC 4 cut(s) 146, 155, 358, 506
NciI CCSGG 1 cut(s) 319
NcoI CCATGG 1 cut(s) 288
NlaIII CATG 6 cut(s) 292, 316, 406, 461, 493, 541
NlaIV GGNNCC 3 cut(s) 139, 323, 564
NmeAIII GCCGAG 1 cut(s) 378
NmuCI GTSAC 2 cut(s) 280, 580
NspI RCATGY 2 cut(s) 461, 493
PaeI GCATGC 1 cut(s) 493
PceI AGGCCT 1 cut(s) 113
PkrI GCNGC 2 cut(s) 351, 463
PleI GAGTC 3 cut(s) 37, 127, 587
PpsI GAGTC 3 cut(s) 37, 127, 587
Psp6I CCWGG 1 cut(s) 181
PspGI CCWGG 1 cut(s) 181
PspN4I GGNNCC 3 cut(s) 139, 323, 564
RsaI GTAC 1 cut(s) 323
RsaNI GTAC 1 cut(s) 322
RseI CAYNNNNRTG 2 cut(s) 287, 311
SaqAI TTAA 3 cut(s) 441, 534, 555
SatI GCNGC 2 cut(s) 350, 462
SchI GAGTC 3 cut(s) 37, 128, 588
ScrFI CCNGG 2 cut(s) 183, 319
SduI GDGCHC 2 cut(s) 81, 142
SetI ASST 8 cut(s) 201, 287, 351, 363, 453, 488, 564, 595
SfaNI GCATC 1 cut(s) 198
SfcI CTRYAG 1 cut(s) 510
SmiMI CAYNNNNRTG 2 cut(s) 287, 311
SphI GCATGC 1 cut(s) 493
Sse9I AATT 1 cut(s) 501
SseBI AGGCCT 1 cut(s) 113
SsiI CCGC 1 cut(s) 576
StuI AGGCCT 1 cut(s) 113
StyD4I CCNGG 2 cut(s) 181, 317
StyI CCWWGG 2 cut(s) 108, 288
TaaI ACNGT 2 cut(s) 154, 178
TaiI ACGT 2 cut(s) 287, 488
TaqI TCGA 2 cut(s) 219, 570
TaqII GACCGA 1 cut(s) 268
TasI AATT 1 cut(s) 501
Tru1I TTAA 3 cut(s) 441, 534, 555
Tru9I TTAA 3 cut(s) 441, 534, 555
TscAI CASTG 1 cut(s) 157
TseFI GTSAC 2 cut(s) 280, 580
TseI GCWGC 2 cut(s) 349, 461
Tsp45I GTSAC 2 cut(s) 280, 580
TspDTI ATGAA 1 cut(s) 402
TspGWI ACGGA 2 cut(s) 105, 118
TspRI CASTG 1 cut(s) 157
XceI RCATGY 2 cut(s) 461, 493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.