Rroxscaffold_7G00177340

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000723
Physical Location & Seq
Forward (+)
16841454 .. 16849793
8340 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00177340.1

Sequence Viewer

Length: 2460 bp
ATGTCTTCTGCCACAAATACCATCATCGACATGGACGGTGACAGCATCAAGAAATACTTGTTCAACATAGCCATGAAAAGCCAATGGGAAGAAATTGTCCAAGCATATAATCAAGAGAAGCGGGCTCGCGAGGTAAAGATCACCAGGTCAGGTGACACGGCATTGCACATAGCGGTGTTAGATGGCCAAGAGGAACGTGTTGAAGAACTGGTAAACCTGGTTTCCATAGAGGAGCTGAAACTCCAAAACGAGCGAGGGAATACCCCTCTCCATTTCGCTGCAGCACAGGGGAATGTGAGAATGTGCACATGCATTGCTAAAGGTCATCCTTCTTTGGTTGGTATTCTCAACAAAGATAAAGAGACGCCTCTCTTCTTGGCTGCTCTCCATGGGAAAAAAAATGCCTTCTTGTGTCTCCACTACATTTGTACCCCGGACGAGTCTCAGCCAAAGTACAGTTACTGTAGGAGGGATGATGGAGAGACTATCTTGCATTGTGCAATTGATGGGGACTACTTTGGTATATTGGCCGATGAGCTGAAAAAGGAAGAAGCAGATCAATTCCATGAGCGGGTAATTAATACAATCAACCCTGAAAATGCTCCAAAATACCCAGAAAACTACAAAACCTGCATCAACTTCTTGCTAGTGTTCTGGAAGATGGCTCAAGTATTTGATACTCATAAAGAAGTCGCCCCTAGAAGTGGCCGAAAAAAATCCACAGATCCAGAGAACCCTAAAGAACCTACTGGAGGCAATCCTTACAACACCTGCTTTGATTTTGTCAAGCTTTTATCAAAGGCAATGCTGATTGTTCTTGGATTAGGGACGACGGAGATACAGAAGATAAGGAACAAGAAAGAAAAGCACAAATGGGCTGTTCAGATCATGGACAAGCTACTAGAAAGTGCTTCGATGTATGAATATGAAGACAGTGGCAGCAACAATATCGCCCCCAAGGACGATGAAACAAAGCCTTACAAAATTTCCGATGGTGGCGACCCTATCCCCCTCGAAAGCATTGAAGAACAACCAATGACACTTTGTCCTAGTACTACTGATCAACAAAACAAAAACAAAGGAAACAACGGAACCAACGGTCAAGAACAAAAACGAGTCATTGGAGAAGGGTCATTGCCGCCAGAAGTGACACGGAATAAAACTCCTGAGATGGAAAAGAAGGGAACACCGATATTGATTGCTCCGAAGAACGGCGTGAATGAAATGGTCGAGAAGATCCTAGACCTTTTCCCAGTGGCCATACATGACCTTAATGCACAGAAAAAGAATATAGTTTTGTTGGCTGTGTTGCCGCCAGAAGTGACACGGAATAAAATGGAAAAGAAGGAAACACCGATATTGATTGCTGCGAAGAATGGCGTCACTGAAATGGTCGAGAAGATCCTAGAGCTTTTTCCAGTGGCCATATATGACCTAAATGCACAGAAAAAGAATATAGTTCTGTTGGCTGTGGAGCACAGGCAACCCCATGTGTACCAACTCTTGCTAAAGAGAAGGATCATGAAAGAAAGCGTTTTCTGCAAAGTGGATGAAGATGGCAATAGTGCATTACACCTTGCAGCAAAGTTGGGAGAATACAAGCCTTGGCTAATTCCCGGTGCTGCCTTGCAAATGCAATGGGAAATCAAGTGGTATGAGGTAACAAGTATTCAAACCAATCTTTCATACGGTCTTCATTATGCTTTCGTCAAAAACTCAATGCCACTCCACTTCTTCAACCACTACAACAAGAAAAGGCAAACGGCAAAGGAAATCTTCACCGAAACCCACACCGACATCGTTAAAGACGGCGGCAATTGGCTGGCCAACACCTCCCAGTCGTGCTCCGTCGTCGCTGCCCTCATCGCCACCGTCGCCTTCGCCACCGCCTCCACAGTCCCCGGCGGCACCAAAGAGGAAAACGGCGAGCCCACCCTCGAAAACCAGCCCGCTTTCCATGTCTTCAGCATCGCCTCCCTCGTCGCCCTTTGCTTATCCGTCACGGCAATGGTGATGTTCCTGGCCATTCTGACGTCACGGTATCAGGAGTGGGACTTCGGGAAAGGGCTGCCGAGGAAGCTCCTGTTCGGCCTGACGTCGCTGTTTCTGTCCATCGCTTCGATGCTGATATCGTTTTGCGCCGGACACTTCTTCGTGCTGAAAGATGAGCTGAAATACGCGGCGTTTCCGGTTTATGCAATAACGTGTTTGCCGGTGTCATTTTTCGCTATGGCGCAGTTTCCGTTGTACGTTGATCTGGTGCGGGCTGCGTTTAAGAAGGTGCCGCAGCGGAGTTGCAAGAAAACTTCTAGAGGAGAAGACTACTACCAAGAAGGCAACTATGTGCATCCAAGGCTCAAGGCTCTTGAAGCATACAAGAGAGCTCTCACCACTTGGGCAAGATGGGTGGACGGATACATAATGCCAACAGGACTCGGGCTTTCTTCAAAGGATATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0000166 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006888 GO:0006900 GO:0006901 GO:0006903 GO:0006915 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0006996 GO:0007154 GO:0007165 GO:0007166 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0008625 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010469 GO:0010506 GO:0010508 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010646 GO:0010648 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012501 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017075 GO:0017076 GO:0017148 GO:0019222 GO:0019538 GO:0019905 GO:0022607 GO:0022898 GO:0023051 GO:0023052 GO:0023057 GO:0030162 GO:0030554 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032270 GO:0032409 GO:0032412 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033194 GO:0033554 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034599 GO:0034762 GO:0034765 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0042221 GO:0042802 GO:0042981 GO:0043065 GO:0043066 GO:0043067 GO:0043068 GO:0043069 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043269 GO:0043280 GO:0043281 GO:0043412 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045862 GO:0046777 GO:0046907 GO:0048193 GO:0048194 GO:0048199 GO:0048207 GO:0048208 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051248 GO:0051336 GO:0051345 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0060548 GO:0061024 GO:0065003 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071447 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090114 GO:0097159 GO:0097190 GO:0097191 GO:0097367 GO:0099601 GO:0140096 GO:1900449 GO:1901265 GO:1901363 GO:1901564 GO:1901700 GO:1901701 GO:1902041 GO:1902042 GO:1904062 GO:2000112 GO:2000113 GO:2000116 GO:2000310 GO:2001056 GO:2001233 GO:2001234 GO:2001236 GO:2001237 GO:2001257
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

819

Amino Acids

92.17

Weight (kDa)

7.53

Isoelectric Point (pI)

40.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 31 - 104 7.7e-08 Ankyrin repeats (3 copies)
PGG PF13962 606 - 718 1.8e-27 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 779
AatII GACGTC 2 cut(s) 2036, 2099
Acc36I ACCTGC 2 cut(s) 638, 779
AccB1I GGYRCC 2 cut(s) 1907, 2281
AccBSI CCGCTC 1 cut(s) 571
AccII CGCG 2 cut(s) 129, 2180
AclWI GGATC 4 cut(s) 719, 1231, 1396, 1526
AcoI YGGCCR 7 cut(s) 184, 528, 706, 1257, 1422, 1824, 2022
AcsI RAATTY 1 cut(s) 984
AcuI CTGAAG 1 cut(s) 1948
AcyI GRCGYC 4 cut(s) 365, 1380, 2033, 2096
AfaI GTAC 5 cut(s) 430, 455, 1054, 1496, 2249
AfiI CCNNNNNNNGG 4 cut(s) 571, 704, 752, 1211
AflIII ACRYGT 2 cut(s) 196, 2204
AgsI TTSAA 7 cut(s) 64, 203, 1025, 1673, 1738, 2369, 2448
AhdI GACNNNNNGTC 1 cut(s) 1044
AjnI CCWGG 3 cut(s) 143, 216, 2019
AluBI AGCT 8 cut(s) 235, 538, 790, 898, 1411, 2080, 2170, 2384
AluI AGCT 8 cut(s) 235, 538, 790, 898, 1411, 2080, 2170, 2384
Alw21I GWGCWC 4 cut(s) 308, 1479, 1847, 2386
Alw26I GTCTC 4 cut(s) 356, 419, 447, 476
Alw44I GTGCAC 1 cut(s) 304
AlwI GGATC 4 cut(s) 719, 1231, 1396, 1526
AlwNI CAGNNNCTG 1 cut(s) 462
Ama87I CYCGRG 1 cut(s) 2435
AoxI GGCC 8 cut(s) 184, 528, 706, 1257, 1422, 1824, 2022, 2089
ApaLI GTGCAC 1 cut(s) 304
ApoI RAATTY 1 cut(s) 984
AseI ATTAAT 1 cut(s) 579
AspLEI GCGC 2 cut(s) 2141, 2236
AsuC2I CCSGG 3 cut(s) 434, 1617, 1902
AsuHPI GGTGA 6 cut(s) 50, 133, 164, 1771, 2023, 2380
AvaI CYCGRG 1 cut(s) 2435
BaeGI GKGCMC 1 cut(s) 308
BaeI ACNNNNGTAYC 2 cut(s) 412, 445
BalI TGGCCA 5 cut(s) 186, 1259, 1424, 1826, 2024
BanI GGYRCC 2 cut(s) 1907, 2281
BanII GRGCYC 3 cut(s) 127, 1932, 2386
BbsI GAAGAC 4 cut(s) 936, 1685, 1954, 2325
Bbv12I GWGCWC 4 cut(s) 308, 1479, 1847, 2386
BceAI ACGGC 6 cut(s) 174, 1228, 1779, 1825, 1939, 2019
BcgI CGANNNNNNTGC 2 cut(s) 931, 965
BciT130I CCWGG 3 cut(s) 145, 218, 2021
BciVI GTATCC 1 cut(s) 2408
BclI TGATCA 1 cut(s) 1060
BcnI CCSGG 3 cut(s) 434, 1617, 1902
BcoDI GTCTC 4 cut(s) 356, 419, 447, 476
BfaI CTAG 7 cut(s) 647, 699, 902, 1050, 1241, 1406, 2310
BfmI CTRYAG 2 cut(s) 279, 463
BfuAI ACCTGC 2 cut(s) 638, 779
BfuI GTATCC 1 cut(s) 2408
BmcAI AGTACT 1 cut(s) 1054
Bme1390I CCNGG 6 cut(s) 145, 218, 434, 1617, 1902, 2021
BmeRI GACNNNNNGTC 1 cut(s) 1044
BmeT110I CYCGRG 1 cut(s) 2435
BmiI GGNNCC 3 cut(s) 1093, 1909, 2283
BmrFI CCNGG 6 cut(s) 145, 218, 434, 1617, 1902, 2021
BmrI ACTGGG 2 cut(s) 1247, 1831
BmsI GCATC 5 cut(s) 54, 642, 1977, 2112, 2356
BmuI ACTGGG 2 cut(s) 1247, 1831
BpiI GAAGAC 4 cut(s) 936, 1685, 1954, 2325
BpmI CTGGAG 1 cut(s) 771
BpuEI CTTGAG 2 cut(s) 651, 2342
BpuMI CCSGG 3 cut(s) 434, 1617, 1902
BsaHI GRCGYC 4 cut(s) 365, 1380, 2033, 2096
BsaJI CCNNGG 7 cut(s) 388, 432, 957, 1604, 1900, 2072, 2351
BsaWI WCCGGW 1 cut(s) 2188
Bsc4I CCNNNNNNNGG 4 cut(s) 571, 704, 752, 1211
Bse118I RCCGGY 1 cut(s) 2212
Bse1I ACTGG 5 cut(s) 213, 754, 1253, 1418, 1837
Bse3DI GCAATG 6 cut(s) 161, 312, 810, 1133, 1643, 2013
BseBI CCWGG 3 cut(s) 145, 218, 2021
BseDI CCNNGG 7 cut(s) 388, 432, 957, 1604, 1900, 2072, 2351
BseGI GGATG 4 cut(s) 325, 478, 1555, 2347
BseLI CCNNNNNNNGG 4 cut(s) 571, 704, 752, 1211
BseMI GCAATG 6 cut(s) 161, 312, 810, 1133, 1643, 2013
BseMII CTCAG 2 cut(s) 458, 1158
BseNI ACTGG 5 cut(s) 213, 754, 1253, 1418, 1837
BseRI GAGGAG 2 cut(s) 245, 2328
BseSI GKGCMC 1 cut(s) 308
Bsh1236I CGCG 2 cut(s) 129, 2180
BshFI GGCC 8 cut(s) 186, 530, 708, 1259, 1424, 1826, 2024, 2091
BshNI GGYRCC 2 cut(s) 1907, 2281
BsiHKAI GWGCWC 4 cut(s) 308, 1479, 1847, 2386
BsiHKCI CYCGRG 1 cut(s) 2435
BsiSI CCGG 6 cut(s) 434, 1617, 1902, 2142, 2189, 2213
BslFI GGGAC 4 cut(s) 524, 841, 1883, 2066
BslI CCNNNNNNNGG 4 cut(s) 571, 704, 752, 1211
BsmAI GTCTC 4 cut(s) 356, 419, 447, 476
BsmBI CGTCTC 1 cut(s) 356
BsmFI GGGAC 4 cut(s) 524, 841, 1883, 2066
BsnI GGCC 8 cut(s) 186, 530, 708, 1259, 1424, 1826, 2024, 2091
BsoBI CYCGRG 1 cut(s) 2435
Bsp1286I GDGCHC 6 cut(s) 127, 308, 1479, 1847, 1932, 2386
Bsp143I GATC 9 cut(s) 138, 556, 724, 885, 1060, 1236, 1401, 1518, 2254
Bsp19I CCATGG 1 cut(s) 388
Bsp68I TCGCGA 1 cut(s) 129
BspANI GGCC 8 cut(s) 186, 530, 708, 1259, 1424, 1826, 2024, 2091
BspCNI CTCAG 2 cut(s) 457, 1159
BspFNI CGCG 2 cut(s) 129, 2180
BspHI TCATGA 1 cut(s) 1521
BspLI GGNNCC 3 cut(s) 1093, 1909, 2283
BspMAI CTGCAG 1 cut(s) 283
BspMI ACCTGC 2 cut(s) 638, 779
BspPI GGATC 4 cut(s) 719, 1231, 1396, 1526
BspT107I GGYRCC 2 cut(s) 1907, 2281
BsrBI CCGCTC 1 cut(s) 571
BsrDI GCAATG 6 cut(s) 161, 312, 810, 1133, 1643, 2013
BsrFI RCCGGY 1 cut(s) 2212
BsrI ACTGG 5 cut(s) 213, 754, 1253, 1418, 1837
BssAI RCCGGY 1 cut(s) 2212
BssECI CCNNGG 7 cut(s) 388, 432, 957, 1604, 1900, 2072, 2351
BssMI GATC 9 cut(s) 138, 556, 724, 885, 1060, 1236, 1401, 1518, 2254
BssNI GRCGYC 4 cut(s) 365, 1380, 2033, 2096
BssT1I CCWWGG 4 cut(s) 388, 957, 1604, 2351
Bst2UI CCWGG 3 cut(s) 145, 218, 2021
Bst4CI ACNGT 9 cut(s) 38, 458, 464, 935, 1100, 1691, 1873, 1897, 2040
Bst6I CTCTTC 1 cut(s) 377
BstACI GRCGYC 4 cut(s) 365, 1380, 2033, 2096
BstC8I GCNNGC 6 cut(s) 123, 127, 1824, 1928, 1950, 2265
BstDEI CTNAG 2 cut(s) 444, 1167
BstDSI CCRYGG 1 cut(s) 388
BstENI CCTNNNNNAGG 1 cut(s) 750
BstF5I GGATG 4 cut(s) 325, 478, 1555, 2347
BstFNI CGCG 2 cut(s) 129, 2180
BstHHI GCGC 2 cut(s) 2141, 2236
BstKTI GATC 9 cut(s) 141, 559, 727, 888, 1063, 1239, 1404, 1521, 2257
BstMAI GTCTC 4 cut(s) 356, 419, 447, 476
BstMBI GATC 9 cut(s) 138, 556, 724, 885, 1060, 1236, 1401, 1518, 2254
BstMWI GCNNNNNNNGC 6 cut(s) 1539, 1865, 1874, 2077, 2353, 2369
BstNI CCWGG 3 cut(s) 145, 218, 2021
BstNSI RCATGY 1 cut(s) 312
BstSCI CCNGG 6 cut(s) 143, 216, 432, 1615, 1900, 2019
BstSFI CTRYAG 2 cut(s) 279, 463
BstSLI GKGCMC 1 cut(s) 308
BstUI CGCG 2 cut(s) 129, 2180
BstV2I GAAGAC 4 cut(s) 936, 1685, 1954, 2325
BstX2I RGATCY 3 cut(s) 724, 1236, 1401
BstYI RGATCY 3 cut(s) 724, 1236, 1401
BsuI GTATCC 1 cut(s) 2408
BsuRI GGCC 8 cut(s) 186, 530, 708, 1259, 1424, 1826, 2024, 2091
BtgI CCRYGG 1 cut(s) 388
BtgZI GCGATG 3 cut(s) 1849, 1954, 2098
BtsCI GGATG 4 cut(s) 325, 478, 1555, 2347
BtsIMutI CAGTG 4 cut(s) 940, 1260, 1383, 1425
BtuMI TCGCGA 1 cut(s) 129
BveI ACCTGC 2 cut(s) 638, 779
Cac8I GCNNGC 6 cut(s) 123, 127, 1824, 1928, 1950, 2265
CaiI CAGNNNCTG 1 cut(s) 462
CciI TCATGA 1 cut(s) 1521
CfoI GCGC 2 cut(s) 2141, 2236
Cfr10I RCCGGY 1 cut(s) 2212
CseI GACGC 2 cut(s) 373, 1369
CsiI ACCWGGT 2 cut(s) 143, 216
Csp6I GTAC 5 cut(s) 429, 454, 1053, 1495, 2248
CspCI CAANNNNNGTGG 4 cut(s) 407, 442, 2388, 2423
CviQI GTAC 5 cut(s) 429, 454, 1053, 1495, 2248
DdeI CTNAG 2 cut(s) 444, 1167
DpnI GATC 9 cut(s) 140, 558, 726, 887, 1062, 1238, 1403, 1520, 2256
DpnII GATC 9 cut(s) 138, 556, 724, 885, 1060, 1236, 1401, 1518, 2254
DriI GACNNNNNGTC 1 cut(s) 1044
EaeI YGGCCR 7 cut(s) 184, 528, 706, 1257, 1422, 1824, 2022
Eam1104I CTCTTC 1 cut(s) 377
Eam1105I GACNNNNNGTC 1 cut(s) 1044
EarI CTCTTC 1 cut(s) 377
Ecl136II GAGCTC 1 cut(s) 2384
Eco130I CCWWGG 4 cut(s) 388, 957, 1604, 2351
Eco24I GRGCYC 3 cut(s) 127, 1932, 2386
Eco32I GATATC 1 cut(s) 2130
Eco53kI GAGCTC 1 cut(s) 2384
Eco57I CTGAAG 1 cut(s) 1948
Eco88I CYCGRG 1 cut(s) 2435
EcoICRI GAGCTC 1 cut(s) 2384
EcoNI CCTNNNNNAGG 1 cut(s) 750
EcoRII CCWGG 3 cut(s) 143, 216, 2019
EcoRV GATATC 1 cut(s) 2130
EcoT14I CCWWGG 4 cut(s) 388, 957, 1604, 2351
EcoT22I ATGCAT 1 cut(s) 314
EcoT38I GRGCYC 3 cut(s) 127, 1932, 2386
ErhI CCWWGG 4 cut(s) 388, 957, 1604, 2351
Esp3I CGTCTC 1 cut(s) 356
FalI AAGNNNNNCTT 4 cut(s) 41, 73, 1760, 1792
FaqI GGGAC 4 cut(s) 524, 841, 1883, 2066
FauI CCCGC 4 cut(s) 114, 564, 1957, 2256
FbaI TGATCA 1 cut(s) 1060
FokI GGATG 4 cut(s) 312, 485, 1562, 2334
FriOI GRGCYC 3 cut(s) 127, 1932, 2386
FspBI CTAG 7 cut(s) 647, 699, 902, 1050, 1241, 1406, 2310
GlaI GCGC 2 cut(s) 2140, 2235
GsuI CTGGAG 1 cut(s) 771
HaeIII GGCC 8 cut(s) 186, 530, 708, 1259, 1424, 1826, 2024, 2091
HapII CCGG 6 cut(s) 434, 1617, 1902, 2142, 2189, 2213
HgaI GACGC 2 cut(s) 373, 1369
HhaI GCGC 2 cut(s) 2141, 2236
Hin1I GRCGYC 4 cut(s) 365, 1380, 2033, 2096
Hin6I GCGC 2 cut(s) 2139, 2234
HinP1I GCGC 2 cut(s) 2139, 2234
HindIII AAGCTT 1 cut(s) 788
HinfI GANTC 3 cut(s) 440, 1116, 2433
HpaII CCGG 6 cut(s) 434, 1617, 1902, 2142, 2189, 2213
HphI GGTGA 6 cut(s) 50, 133, 164, 1771, 2023, 2380
Hpy166II GTNNAC 4 cut(s) 214, 306, 1495, 2410
Hpy188I TCNGA 4 cut(s) 885, 991, 1206, 2031
Hpy8I GTNNAC 4 cut(s) 214, 306, 1495, 2410
Hpy99I CGWCG 6 cut(s) 835, 1853, 1856, 1877, 1985, 2101
HpyAV CCTTC 9 cut(s) 339, 415, 1121, 1174, 1339, 1509, 1888, 2272, 2327
HpyCH4III ACNGT 9 cut(s) 38, 458, 464, 935, 1100, 1691, 1873, 1897, 2040
HpyCH4IV ACGT 5 cut(s) 196, 2033, 2096, 2204, 2250
HpyF10VI GCNNNNNNNGC 6 cut(s) 1539, 1865, 1874, 2077, 2353, 2369
HpyF3I CTNAG 2 cut(s) 444, 1167
HpySE526I ACGT 5 cut(s) 196, 2033, 2096, 2204, 2250
Hsp92I GRCGYC 4 cut(s) 365, 1380, 2033, 2096
HspAI GCGC 2 cut(s) 2139, 2234
Ksp22I TGATCA 1 cut(s) 1060
Kzo9I GATC 9 cut(s) 138, 556, 724, 885, 1060, 1236, 1401, 1518, 2254
LmnI GCTCC 6 cut(s) 232, 607, 1207, 1474, 1850, 2085
LweI GCATC 5 cut(s) 54, 642, 1977, 2112, 2356
MabI ACCWGGT 2 cut(s) 143, 216
MaeI CTAG 7 cut(s) 647, 699, 902, 1050, 1241, 1406, 2310
MaeII ACGT 5 cut(s) 196, 2033, 2096, 2204, 2250
MaeIII GTNAC 9 cut(s) 38, 152, 458, 1147, 1321, 1381, 1660, 1999, 2034
MalI GATC 9 cut(s) 140, 558, 726, 887, 1062, 1238, 1403, 1520, 2256
MbiI CCGCTC 1 cut(s) 571
MboI GATC 9 cut(s) 138, 556, 724, 885, 1060, 1236, 1401, 1518, 2254
MfeI CAATTG 2 cut(s) 501, 1816
MflI RGATCY 3 cut(s) 724, 1236, 1401
MhlI GDGCHC 6 cut(s) 127, 308, 1479, 1847, 1932, 2386
MlsI TGGCCA 5 cut(s) 186, 1259, 1424, 1826, 2024
MluCI AATT 7 cut(s) 93, 501, 560, 576, 984, 1611, 1816
MluNI TGGCCA 5 cut(s) 186, 1259, 1424, 1826, 2024
MlyI GAGTC 3 cut(s) 449, 1125, 2427
Mox20I TGGCCA 5 cut(s) 186, 1259, 1424, 1826, 2024
Mph1103I ATGCAT 1 cut(s) 314
MscI TGGCCA 5 cut(s) 186, 1259, 1424, 1826, 2024
MseI TTAA 4 cut(s) 579, 1272, 1803, 2274
MslI CAYNNNNRTG 5 cut(s) 29, 71, 173, 1388, 2006
Msp20I TGGCCA 5 cut(s) 186, 1259, 1424, 1826, 2024
MspA1I CMGCKG 1 cut(s) 2290
MspI CCGG 6 cut(s) 434, 1617, 1902, 2142, 2189, 2213
MspR9I CCNGG 6 cut(s) 145, 218, 434, 1617, 1902, 2021
MunI CAATTG 2 cut(s) 501, 1816
MvaI CCWGG 3 cut(s) 145, 218, 2021
MvnI CGCG 2 cut(s) 129, 2180
MwoI GCNNNNNNNGC 6 cut(s) 1539, 1865, 1874, 2077, 2353, 2369
NciI CCSGG 3 cut(s) 434, 1617, 1902
NcoI CCATGG 1 cut(s) 388
NdeII GATC 9 cut(s) 138, 556, 724, 885, 1060, 1236, 1401, 1518, 2254
NlaIV GGNNCC 3 cut(s) 1093, 1909, 2283
NmeAIII GCCGAG 1 cut(s) 2097
NmuCI GTSAC 7 cut(s) 38, 152, 1147, 1321, 1381, 1999, 2034
NruI TCGCGA 1 cut(s) 129
NsiI ATGCAT 1 cut(s) 314
NspI RCATGY 1 cut(s) 312
PagI TCATGA 1 cut(s) 1521
PaqCI CACCTGC 1 cut(s) 779
PcsI WCGNNNNNNNCGW 1 cut(s) 1977
PleI GAGTC 3 cut(s) 448, 1124, 2427
PpsI GAGTC 3 cut(s) 448, 1124, 2427
PshBI ATTAAT 1 cut(s) 579
Psp124BI GAGCTC 1 cut(s) 2386
Psp6I CCWGG 3 cut(s) 143, 216, 2019
PspGI CCWGG 3 cut(s) 143, 216, 2019
PspN4I GGNNCC 3 cut(s) 1093, 1909, 2283
PstI CTGCAG 1 cut(s) 283
PstNI CAGNNNCTG 1 cut(s) 462
PsuI RGATCY 3 cut(s) 724, 1236, 1401
RruI TCGCGA 1 cut(s) 129
RsaI GTAC 5 cut(s) 430, 455, 1054, 1496, 2249
RsaNI GTAC 5 cut(s) 429, 454, 1053, 1495, 2248
RseI CAYNNNNRTG 5 cut(s) 29, 71, 173, 1388, 2006
SacI GAGCTC 1 cut(s) 2386
SaqAI TTAA 4 cut(s) 579, 1272, 1803, 2274
Sau3AI GATC 9 cut(s) 138, 556, 724, 885, 1060, 1236, 1401, 1518, 2254
ScaI AGTACT 1 cut(s) 1054
SchI GAGTC 3 cut(s) 449, 1125, 2427
ScrFI CCNGG 6 cut(s) 145, 218, 434, 1617, 1902, 2021
SduI GDGCHC 6 cut(s) 127, 308, 1479, 1847, 1932, 2386
SexAI ACCWGGT 2 cut(s) 143, 216
SfaNI GCATC 5 cut(s) 54, 642, 1977, 2112, 2356
SfcI CTRYAG 2 cut(s) 279, 463
SmiMI CAYNNNNRTG 5 cut(s) 29, 71, 173, 1388, 2006
SmlI CTYRAG 2 cut(s) 666, 2357
SmoI CTYRAG 2 cut(s) 666, 2357
Sse9I AATT 7 cut(s) 93, 501, 560, 576, 984, 1611, 1816
SspMI CTAG 7 cut(s) 647, 699, 902, 1050, 1241, 1406, 2310
SstI GAGCTC 1 cut(s) 2386
StyD4I CCNGG 6 cut(s) 143, 216, 432, 1615, 1900, 2019
StyI CCWWGG 4 cut(s) 388, 957, 1604, 2351
TaaI ACNGT 9 cut(s) 38, 458, 464, 935, 1100, 1691, 1873, 1897, 2040
TaiI ACGT 5 cut(s) 199, 2036, 2099, 2207, 2253
TaqI TCGA 7 cut(s) 27, 914, 1014, 1230, 1395, 1938, 2120
TasI AATT 7 cut(s) 93, 501, 560, 576, 984, 1611, 1816
TatI WGTACW 2 cut(s) 453, 1052
TauI GCSGC 6 cut(s) 1141, 1315, 1815, 1908, 2183, 2287
Tru1I TTAA 4 cut(s) 579, 1272, 1803, 2274
Tru9I TTAA 4 cut(s) 579, 1272, 1803, 2274
TscAI CASTG 4 cut(s) 940, 1260, 1390, 1425
TseFI GTSAC 7 cut(s) 38, 152, 1147, 1321, 1381, 1999, 2034
Tsp45I GTSAC 7 cut(s) 38, 152, 1147, 1321, 1381, 1999, 2034
TspDTI ATGAA 9 cut(s) 89, 936, 942, 981, 1236, 1538, 1566, 1674, 1685
TspGWI ACGGA 8 cut(s) 848, 1104, 1168, 1342, 1837, 1987, 2232, 2427
TspRI CASTG 4 cut(s) 940, 1260, 1390, 1425
VneI GTGCAC 1 cut(s) 304
VspI ATTAAT 1 cut(s) 579
XagI CCTNNNNNAGG 1 cut(s) 750
XapI RAATTY 1 cut(s) 984
XbaI TCTAGA 1 cut(s) 2309
XceI RCATGY 1 cut(s) 312
XcmI CCANNNNNNNNNTGG 1 cut(s) 28
XspI CTAG 7 cut(s) 647, 699, 902, 1050, 1241, 1406, 2310
ZraI GACGTC 2 cut(s) 2034, 2097
ZrmI AGTACT 1 cut(s) 1054
Zsp2I ATGCAT 1 cut(s) 314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.