RLG00000012243

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000723
Physical Location & Seq
Forward (+)
16566238 .. 16569806
3569 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012243

Sequence Viewer

Length: 1806 bp
ATGTCTTCTCCCACAAATACATGGATCGGCATGGACAGTGAGAGCATCAAGAAAAAGTTGTTCAAGATAGCCATGAAAAGCCAATGGGAAGAAATTGTCCACGCATATGGGCAAGAGAAGCGGGCTCGCGAGGTAAAGATCACCAGGTCAGGTGACACGGCATTGCACATAGCGGTGTTAGATGGCCAAGAGGAACGTGTTGAAGAGCTAGTAAACCTGGTTTCCAAAGAGGAGCTGGAACTCAAAAACGAGCGAGGGAATACCCCTCTCCATTTCGCTGCAGCACAGGGGAATGTGAGAATGTGCACATGCATTGCGAAATTTCATCCTTCTTTGGTTGGTATTCTCAACAAAGATAAAGAGACGCCTCTCTTCTTGGCTGCTCTCCATGGTAAAAAAGATGCCTTCTTGTGTCTCCACTACATTTGTACTCCTGACAAGTCTCCTCCAAACTACAATTACTGTAGGAGGGAAGATGGAGAGACTATCTTGCATTGTGCAATTGATGGGGACTACTTTGATTTGGCATTTCAGATAATAGCCCTGTATAAAGATCTAGTTAATTATGTTAATCAAGTTGGGTTTTCCCCTCTCCATCTTCTGGCTAGTAAGCCTTCTGCCTTCAAAAGTGGTAGCCACCTTAGACCTTGGAGCATAATCATTTACCACTGTATATTGGTCGATGAGCTGAAGGTGGAAGAAGCACATCACTTCCATGAGCGGGTAATTAAGACAATTGACTCTGAAAAGGCTTCAGAATACCCAGAAAACTATAAAACCTGCATCAACTTCTTGCTAGTGTTCTGGAAGATGGCTCAAGCATTAGGAAAAAGATCAACAGATCCAGAGAACCCTGAACCTAAAGGAGGAAATCCAGGTCATTACAATGCCTGCTTTGATTATGTCAAGCTTTTATCAAAGGCAATGCTGATTGTTCTTGGACTAGGGTCTACGGAGGTACAGAAGATAAGGAACAAGAAAGAAAAGCACAAATGGGCTCTTCAGATCATGGACAAGCTACTAGAAAGTGTTTCGATGTATGAATATGAAGACAGTGGTATGAACCCGCAGGCAGCAACAGATGATGAAACAAGCACCCTTGGAAGCATTGAAGAACAACCAACGACAGTTCCTCCTGGTAGTACTGATCACCAACAAAACGAAAACAAGGGAAACAACGGAACCATTGGTCAAGAACAAAACGGAGTCATTGGAGAAGGGTCATTGCCGACGGAAACACCGATATTGATTGCTGCGAAGAATGGCGTCACTGAAATGGTCGAGAAGATCCTAGAAAATTTTCCAGTGGCCATACATGACCTCAATGCACAGAAAAAGAATATAGTTCTGTTGGCTGTGGAGCATAGGCAACCCCATGTGTACCAACTCTTGCTAAAGAGAAAGATATTGAAAGAAAGCGTTTTCTGCAAAGTGGATAAAGATGGCAATAGTGCATTACACCTTGCAGCAAAGTTGGAAGATTACAAACCTTGGCTAATTCCTGGTGCTGCCTTGCAAATGCAATGGGACATCAAGTGGTATGAGTTCGTCAAAAACTCAATGCCGCTGGGCTTCTTCTCACGCTACAACGAGAAAAGACAAACGGCAAAAGAAATCTTCACCGAAACCCACACCAAGCTCGTTAAAGACGGCGGCAAATGGCTGGCCAACACCTCCCAATCGTGCTCCGTCGTCGCCGCCCTCATAGCCACCGTCGCCTTCGCCACAGCCTCCACCTTTCCGTTGTACGTTGATCTGGTGTGGGCTACGTTTAAGAAGGTGCCGCAGCGGAGGTTCAAGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0000166 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006888 GO:0006900 GO:0006901 GO:0006903 GO:0006915 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0006996 GO:0007154 GO:0007165 GO:0007166 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0008625 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010469 GO:0010506 GO:0010508 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010646 GO:0010648 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012501 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017075 GO:0017076 GO:0017148 GO:0019222 GO:0019538 GO:0019905 GO:0022607 GO:0022898 GO:0023051 GO:0023052 GO:0023057 GO:0030162 GO:0030554 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032270 GO:0032409 GO:0032412 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033194 GO:0033554 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034599 GO:0034762 GO:0034765 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0042221 GO:0042802 GO:0042981 GO:0043065 GO:0043066 GO:0043067 GO:0043068 GO:0043069 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043269 GO:0043280 GO:0043281 GO:0043412 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045862 GO:0046777 GO:0046907 GO:0048193 GO:0048194 GO:0048199 GO:0048207 GO:0048208 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051248 GO:0051336 GO:0051345 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0060548 GO:0061024 GO:0065003 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071447 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090114 GO:0097159 GO:0097190 GO:0097191 GO:0097367 GO:0099601 GO:0140096 GO:1900449 GO:1901265 GO:1901363 GO:1901564 GO:1901700 GO:1901701 GO:1902041 GO:1902042 GO:1904062 GO:2000112 GO:2000113 GO:2000116 GO:2000310 GO:2001056 GO:2001233 GO:2001234 GO:2001236 GO:2001237 GO:2001257
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

602

Amino Acids

67.88

Weight (kDa)

6.88

Isoelectric Point (pI)

39.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 46 - 103 9e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 55 - 137 3.3e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 416 - 493 2.8e-06 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 788
AccB1I GGYRCC 1 cut(s) 1780
AccB7I CCANNNNNTGG 1 cut(s) 601
AccBSI CCGCTC 1 cut(s) 721
AccI GTMKAC 1 cut(s) 950
AccII CGCG 1 cut(s) 129
AciI CCGC 9 cut(s) 121, 173, 721, 1067, 1565, 1653, 1698, 1784, 1789
AclWI GGATC 3 cut(s) 32, 836, 1282
AcoI YGGCCR 3 cut(s) 184, 1308, 1665
AcsI RAATTY 2 cut(s) 320, 1297
AcuI CTGAAG 3 cut(s) 710, 738, 986
AcyI GRCGYC 2 cut(s) 365, 1266
AfaI GTAC 5 cut(s) 430, 960, 1144, 1382, 1748
AfiI CCNNNNNNNGG 3 cut(s) 601, 721, 866
AflIII ACRYGT 1 cut(s) 196
AgsI TTSAA 6 cut(s) 64, 203, 625, 1112, 1411, 1798
AjnI CCWGG 5 cut(s) 143, 216, 874, 1135, 1501
AluBI AGCT 6 cut(s) 208, 235, 688, 910, 1018, 1639
AluI AGCT 6 cut(s) 208, 235, 688, 910, 1018, 1639
Alw21I GWGCWC 2 cut(s) 308, 1688
Alw26I GTCTC 4 cut(s) 356, 419, 447, 476
Alw44I GTGCAC 1 cut(s) 304
AlwI GGATC 3 cut(s) 32, 836, 1282
AoxI GGCC 3 cut(s) 184, 1308, 1665
ApaLI GTGCAC 1 cut(s) 304
ApeKI GCWGC 8 cut(s) 278, 281, 380, 1073, 1253, 1466, 1508, 1786
ApoI RAATTY 2 cut(s) 320, 1297
Asp700I GAANNNNTTC 1 cut(s) 1299
AsuHPI GGTGA 4 cut(s) 133, 164, 1142, 1612
BaeGI GKGCMC 1 cut(s) 308
BalI TGGCCA 3 cut(s) 186, 1310, 1667
BanI GGYRCC 1 cut(s) 1780
BanII GRGCYC 2 cut(s) 127, 1000
BbsI GAAGAC 1 cut(s) 1056
Bbv12I GWGCWC 2 cut(s) 308, 1688
BbvI GCAGC 8 cut(s) 265, 293, 367, 1085, 1240, 1478, 1495, 1798
BccI CCATC 6 cut(s) 176, 470, 500, 603, 805, 1436
BceAI ACGGC 3 cut(s) 174, 1620, 1666
BciT130I CCWGG 5 cut(s) 145, 218, 876, 1137, 1503
BclI TGATCA 1 cut(s) 1147
BcoDI GTCTC 4 cut(s) 356, 419, 447, 476
BfaI CTAG 7 cut(s) 209, 557, 606, 797, 944, 1022, 1292
BfmI CTRYAG 2 cut(s) 279, 463
BfuAI ACCTGC 1 cut(s) 788
BglII AGATCT 1 cut(s) 553
BmcAI AGTACT 1 cut(s) 1144
Bme1390I CCNGG 5 cut(s) 145, 218, 876, 1137, 1503
BmiI GGNNCC 2 cut(s) 1183, 1782
BmrFI CCNGG 5 cut(s) 145, 218, 876, 1137, 1503
BmsI GCATC 3 cut(s) 54, 391, 792
BoxI GACNNNNGTC 1 cut(s) 946
BpiI GAAGAC 1 cut(s) 1056
BpuEI CTTGAG 1 cut(s) 801
BsaHI GRCGYC 2 cut(s) 365, 1266
BsaJI CCNNGG 4 cut(s) 388, 647, 1099, 1490
BsaXI ACNNNNNCTCC 2 cut(s) 1117, 1147
Bsc4I CCNNNNNNNGG 3 cut(s) 601, 721, 866
Bse1I ACTGG 1 cut(s) 1304
Bse3DI GCAATG 5 cut(s) 161, 312, 930, 1223, 1529
BseBI CCWGG 5 cut(s) 145, 218, 876, 1137, 1503
BseDI CCNNGG 4 cut(s) 388, 647, 1099, 1490
BseGI GGATG 1 cut(s) 325
BseLI CCNNNNNNNGG 3 cut(s) 601, 721, 866
BseMI GCAATG 5 cut(s) 161, 312, 930, 1223, 1529
BseNI ACTGG 1 cut(s) 1304
BseRI GAGGAG 2 cut(s) 245, 435
BseSI GKGCMC 1 cut(s) 308
BseXI GCAGC 8 cut(s) 265, 293, 367, 1085, 1240, 1478, 1495, 1798
BseYI CCCAGC 1 cut(s) 1567
Bsh1236I CGCG 1 cut(s) 129
BshFI GGCC 3 cut(s) 186, 1310, 1667
BshNI GGYRCC 1 cut(s) 1780
BsiHKAI GWGCWC 2 cut(s) 308, 1688
BslFI GGGAC 2 cut(s) 524, 1541
BslI CCNNNNNNNGG 3 cut(s) 601, 721, 866
BsmAI GTCTC 4 cut(s) 356, 419, 447, 476
BsmBI CGTCTC 1 cut(s) 356
BsmFI GGGAC 2 cut(s) 524, 1541
BsnI GGCC 3 cut(s) 186, 1310, 1667
Bsp1286I GDGCHC 4 cut(s) 127, 308, 1000, 1688
Bsp143I GATC 9 cut(s) 24, 138, 553, 833, 841, 1005, 1147, 1287, 1753
Bsp19I CCATGG 1 cut(s) 388
Bsp68I TCGCGA 1 cut(s) 129
BspACI CCGC 9 cut(s) 121, 173, 721, 1067, 1565, 1653, 1698, 1784, 1789
BspANI GGCC 3 cut(s) 186, 1310, 1667
BspFNI CGCG 1 cut(s) 129
BspLI GGNNCC 2 cut(s) 1183, 1782
BspMAI CTGCAG 1 cut(s) 283
BspMI ACCTGC 1 cut(s) 788
BspPI GGATC 3 cut(s) 32, 836, 1282
BspQI GCTCTTC 2 cut(s) 198, 1005
BspT107I GGYRCC 1 cut(s) 1780
BsrBI CCGCTC 1 cut(s) 721
BsrDI GCAATG 5 cut(s) 161, 312, 930, 1223, 1529
BsrI ACTGG 1 cut(s) 1304
BssECI CCNNGG 4 cut(s) 388, 647, 1099, 1490
BssMI GATC 9 cut(s) 24, 138, 553, 833, 841, 1005, 1147, 1287, 1753
BssNI GRCGYC 2 cut(s) 365, 1266
BssT1I CCWWGG 4 cut(s) 388, 647, 1099, 1490
Bst2UI CCWGG 5 cut(s) 145, 218, 876, 1137, 1503
Bst4CI ACNGT 6 cut(s) 38, 464, 671, 1055, 1129, 1714
Bst6I CTCTTC 3 cut(s) 198, 377, 1005
BstACI GRCGYC 2 cut(s) 365, 1266
BstC8I GCNNGC 5 cut(s) 123, 127, 892, 1071, 1665
BstDEI CTNAG 1 cut(s) 641
BstDSI CCRYGG 1 cut(s) 388
BstENI CCTNNNNNAGG 1 cut(s) 864
BstF5I GGATG 1 cut(s) 325
BstFNI CGCG 1 cut(s) 129
BstKTI GATC 9 cut(s) 27, 141, 556, 836, 844, 1008, 1150, 1290, 1756
BstMAI GTCTC 4 cut(s) 356, 419, 447, 476
BstMBI GATC 9 cut(s) 24, 138, 553, 833, 841, 1005, 1147, 1287, 1753
BstMWI GCNNNNNNNGC 4 cut(s) 118, 1425, 1706, 1715
BstNI CCWGG 5 cut(s) 145, 218, 876, 1137, 1503
BstNSI RCATGY 1 cut(s) 312
BstPAI GACNNNNGTC 1 cut(s) 946
BstSCI CCNGG 5 cut(s) 143, 216, 874, 1135, 1501
BstSFI CTRYAG 2 cut(s) 279, 463
BstSLI GKGCMC 1 cut(s) 308
BstUI CGCG 1 cut(s) 129
BstV1I GCAGC 8 cut(s) 265, 293, 367, 1085, 1240, 1478, 1495, 1798
BstV2I GAAGAC 1 cut(s) 1056
BstX2I RGATCY 3 cut(s) 553, 841, 1287
BstXI CCANNNNNNTGG 1 cut(s) 107
BstYI RGATCY 3 cut(s) 553, 841, 1287
BsuRI GGCC 3 cut(s) 186, 1310, 1667
BtgI CCRYGG 1 cut(s) 388
BtsCI GGATG 1 cut(s) 325
BtsIMutI CAGTG 5 cut(s) 43, 667, 1060, 1269, 1311
BtuMI TCGCGA 1 cut(s) 129
BveI ACCTGC 1 cut(s) 788
Cac8I GCNNGC 5 cut(s) 123, 127, 892, 1071, 1665
CseI GACGC 2 cut(s) 373, 1255
CsiI ACCWGGT 2 cut(s) 143, 216
Csp6I GTAC 5 cut(s) 429, 959, 1143, 1381, 1747
CspCI CAANNNNNGTGG 2 cut(s) 407, 442
CviAII CATG 9 cut(s) 21, 31, 73, 309, 389, 716, 1009, 1316, 1376
CviQI GTAC 5 cut(s) 429, 959, 1143, 1381, 1747
DdeI CTNAG 1 cut(s) 641
DpnI GATC 9 cut(s) 26, 140, 555, 835, 843, 1007, 1149, 1289, 1755
DpnII GATC 9 cut(s) 24, 138, 553, 833, 841, 1005, 1147, 1287, 1753
EaeI YGGCCR 3 cut(s) 184, 1308, 1665
Eam1104I CTCTTC 3 cut(s) 198, 377, 1005
EarI CTCTTC 3 cut(s) 198, 377, 1005
Eco130I CCWWGG 4 cut(s) 388, 647, 1099, 1490
Eco24I GRGCYC 2 cut(s) 127, 1000
Eco57I CTGAAG 3 cut(s) 710, 738, 986
EcoNI CCTNNNNNAGG 1 cut(s) 864
EcoRII CCWGG 5 cut(s) 143, 216, 874, 1135, 1501
EcoT14I CCWWGG 4 cut(s) 388, 647, 1099, 1490
EcoT22I ATGCAT 1 cut(s) 314
EcoT38I GRGCYC 2 cut(s) 127, 1000
ErhI CCWWGG 4 cut(s) 388, 647, 1099, 1490
Esp3I CGTCTC 1 cut(s) 356
FaeI CATG 9 cut(s) 24, 34, 76, 312, 392, 719, 1012, 1319, 1379
FaqI GGGAC 2 cut(s) 524, 1541
FatI CATG 9 cut(s) 20, 30, 72, 308, 388, 715, 1008, 1315, 1375
FauI CCCGC 3 cut(s) 114, 714, 1074
FauNDI CATATG 1 cut(s) 106
FbaI TGATCA 1 cut(s) 1147
FblI GTMKAC 1 cut(s) 950
FokI GGATG 1 cut(s) 312
FriOI GRGCYC 2 cut(s) 127, 1000
FspBI CTAG 7 cut(s) 209, 557, 606, 797, 944, 1022, 1292
GsaI CCCAGC 1 cut(s) 1571
HaeIII GGCC 3 cut(s) 186, 1310, 1667
HgaI GACGC 2 cut(s) 373, 1255
Hin1I GRCGYC 2 cut(s) 365, 1266
Hin1II CATG 9 cut(s) 24, 34, 76, 312, 392, 719, 1012, 1319, 1379
HindIII AAGCTT 1 cut(s) 908
HinfI GANTC 2 cut(s) 740, 1206
HphI GGTGA 4 cut(s) 133, 164, 1142, 1612
Hpy166II GTNNAC 5 cut(s) 100, 214, 306, 951, 1381
Hpy188I TCNGA 4 cut(s) 534, 745, 757, 1005
Hpy188III TCNNGA 8 cut(s) 49, 64, 128, 434, 805, 845, 1193, 1282
Hpy8I GTNNAC 5 cut(s) 100, 214, 306, 951, 1381
Hpy99I CGWCG 4 cut(s) 1234, 1694, 1697, 1718
HpyAV CCTTC 8 cut(s) 339, 415, 624, 631, 685, 1211, 1729, 1771
HpyCH4III ACNGT 6 cut(s) 38, 464, 671, 1055, 1129, 1714
HpyCH4IV ACGT 3 cut(s) 196, 1749, 1769
HpyF10VI GCNNNNNNNGC 4 cut(s) 118, 1425, 1706, 1715
HpyF3I CTNAG 1 cut(s) 641
HpySE526I ACGT 3 cut(s) 196, 1749, 1769
Hsp92I GRCGYC 2 cut(s) 365, 1266
Hsp92II CATG 9 cut(s) 24, 34, 76, 312, 392, 719, 1012, 1319, 1379
Ksp22I TGATCA 1 cut(s) 1147
Kzo9I GATC 9 cut(s) 24, 138, 553, 833, 841, 1005, 1147, 1287, 1753
LguI GCTCTTC 2 cut(s) 198, 1005
LmnI GCTCC 4 cut(s) 232, 651, 1360, 1691
Lsp1109I GCAGC 8 cut(s) 265, 293, 367, 1085, 1240, 1478, 1495, 1798
LweI GCATC 3 cut(s) 54, 391, 792
MabI ACCWGGT 2 cut(s) 143, 216
MaeI CTAG 7 cut(s) 209, 557, 606, 797, 944, 1022, 1292
MaeII ACGT 3 cut(s) 196, 1749, 1769
MaeIII GTNAC 2 cut(s) 152, 1267
MalI GATC 9 cut(s) 26, 140, 555, 835, 843, 1007, 1149, 1289, 1755
MbiI CCGCTC 1 cut(s) 721
MboI GATC 9 cut(s) 24, 138, 553, 833, 841, 1005, 1147, 1287, 1753
MfeI CAATTG 2 cut(s) 501, 735
MflI RGATCY 3 cut(s) 553, 841, 1287
MhlI GDGCHC 4 cut(s) 127, 308, 1000, 1688
MlsI TGGCCA 3 cut(s) 186, 1310, 1667
MluCI AATT 9 cut(s) 93, 320, 457, 501, 562, 726, 735, 1297, 1497
MluNI TGGCCA 3 cut(s) 186, 1310, 1667
MlyI GAGTC 2 cut(s) 734, 1215
MmeI TCCRAC 1 cut(s) 1455
Mox20I TGGCCA 3 cut(s) 186, 1310, 1667
Mph1103I ATGCAT 1 cut(s) 314
MroXI GAANNNNTTC 1 cut(s) 1299
MscI TGGCCA 3 cut(s) 186, 1310, 1667
MseI TTAA 5 cut(s) 561, 570, 729, 1644, 1773
MslI CAYNNNNRTG 5 cut(s) 105, 173, 714, 885, 1274
Msp20I TGGCCA 3 cut(s) 186, 1310, 1667
MspA1I CMGCKG 2 cut(s) 1567, 1789
MspR9I CCNGG 5 cut(s) 145, 218, 876, 1137, 1503
MunI CAATTG 2 cut(s) 501, 735
MvaI CCWGG 5 cut(s) 145, 218, 876, 1137, 1503
MvnI CGCG 1 cut(s) 129
MwoI GCNNNNNNNGC 4 cut(s) 118, 1425, 1706, 1715
NcoI CCATGG 1 cut(s) 388
NdeI CATATG 1 cut(s) 106
NdeII GATC 9 cut(s) 24, 138, 553, 833, 841, 1005, 1147, 1287, 1753
NlaIII CATG 9 cut(s) 24, 34, 76, 312, 392, 719, 1012, 1319, 1379
NlaIV GGNNCC 2 cut(s) 1183, 1782
NmuCI GTSAC 2 cut(s) 152, 1267
NruI TCGCGA 1 cut(s) 129
NsiI ATGCAT 1 cut(s) 314
NspI RCATGY 1 cut(s) 312
PciSI GCTCTTC 2 cut(s) 198, 1005
PcsI WCGNNNNNNNCGW 1 cut(s) 1238
PdmI GAANNNNTTC 1 cut(s) 1299
PflMI CCANNNNNTGG 1 cut(s) 601
PleI GAGTC 2 cut(s) 734, 1214
PpsI GAGTC 2 cut(s) 734, 1214
PshAI GACNNNNGTC 1 cut(s) 946
Psp6I CCWGG 5 cut(s) 143, 216, 874, 1135, 1501
PspFI CCCAGC 1 cut(s) 1567
PspGI CCWGG 5 cut(s) 143, 216, 874, 1135, 1501
PspN4I GGNNCC 2 cut(s) 1183, 1782
PstI CTGCAG 1 cut(s) 283
PsuI RGATCY 3 cut(s) 553, 841, 1287
RruI TCGCGA 1 cut(s) 129
RsaI GTAC 5 cut(s) 430, 960, 1144, 1382, 1748
RsaNI GTAC 5 cut(s) 429, 959, 1143, 1381, 1747
RseI CAYNNNNRTG 5 cut(s) 105, 173, 714, 885, 1274
SapI GCTCTTC 2 cut(s) 198, 1005
SaqAI TTAA 5 cut(s) 561, 570, 729, 1644, 1773
Sau3AI GATC 9 cut(s) 24, 138, 553, 833, 841, 1005, 1147, 1287, 1753
ScaI AGTACT 1 cut(s) 1144
SchI GAGTC 2 cut(s) 734, 1215
ScrFI CCNGG 5 cut(s) 145, 218, 876, 1137, 1503
SduI GDGCHC 4 cut(s) 127, 308, 1000, 1688
SexAI ACCWGGT 2 cut(s) 143, 216
SfaNI GCATC 3 cut(s) 54, 391, 792
SfcI CTRYAG 2 cut(s) 279, 463
SmiMI CAYNNNNRTG 5 cut(s) 105, 173, 714, 885, 1274
SmlI CTYRAG 1 cut(s) 816
SmoI CTYRAG 1 cut(s) 816
Sse9I AATT 9 cut(s) 93, 320, 457, 501, 562, 726, 735, 1297, 1497
SsiI CCGC 9 cut(s) 121, 173, 721, 1067, 1565, 1653, 1698, 1784, 1789
SspMI CTAG 7 cut(s) 209, 557, 606, 797, 944, 1022, 1292
StyD4I CCNGG 5 cut(s) 143, 216, 874, 1135, 1501
StyI CCWWGG 4 cut(s) 388, 647, 1099, 1490
TaaI ACNGT 6 cut(s) 38, 464, 671, 1055, 1129, 1714
TaiI ACGT 3 cut(s) 199, 1752, 1772
TaqI TCGA 3 cut(s) 681, 1034, 1281
TasI AATT 9 cut(s) 93, 320, 457, 501, 562, 726, 735, 1297, 1497
TatI WGTACW 2 cut(s) 428, 1142
TauI GCSGC 4 cut(s) 1567, 1656, 1700, 1786
Tru1I TTAA 5 cut(s) 561, 570, 729, 1644, 1773
Tru9I TTAA 5 cut(s) 561, 570, 729, 1644, 1773
TscAI CASTG 5 cut(s) 43, 674, 1060, 1276, 1311
TseFI GTSAC 2 cut(s) 152, 1267
TseI GCWGC 8 cut(s) 278, 281, 380, 1073, 1253, 1466, 1508, 1786
Tsp45I GTSAC 2 cut(s) 152, 1267
TspDTI ATGAA 6 cut(s) 89, 314, 1056, 1062, 1076, 1101
TspGWI ACGGA 6 cut(s) 968, 1194, 1218, 1247, 1678, 1731
TspRI CASTG 5 cut(s) 43, 674, 1060, 1276, 1311
Van91I CCANNNNNTGG 1 cut(s) 601
VneI GTGCAC 1 cut(s) 304
XagI CCTNNNNNAGG 1 cut(s) 864
XapI RAATTY 2 cut(s) 320, 1297
XceI RCATGY 1 cut(s) 312
XcmI CCANNNNNNNNNTGG 1 cut(s) 232
XmiI GTMKAC 1 cut(s) 950
XmnI GAANNNNTTC 1 cut(s) 1299
XspI CTAG 7 cut(s) 209, 557, 606, 797, 944, 1022, 1292
ZrmI AGTACT 1 cut(s) 1144
Zsp2I ATGCAT 1 cut(s) 314
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.