RchiOBHm_Chr6g0290151

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000723
Physical Location & Seq
Reverse (-)
53266528 .. 53270449
3922 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26031

Sequence Viewer

Length: 1950 bp
ATGTCTTCTGTCAGAAATACCATGACTGGCATGGACATTGAGAGCATGGACAGTGAGAGCATCAAGAAATACTTGTTCCAGACAGCCATGAAAAGCCAATGGGAAGAAGTTGTCCGAGCATATAGGCAAAACGAGCGGGCTCACAAGGCAAGGATCACCAAGTCAGGTGACACAGCATTGCACATAGCAGTGTCGGACGGCCAAGAGGAAATTGTTGAGAAACTAGTAAAGCTGGTTTCCAAAAAGGAGCTGACGCTGAAAATCCAAAATGAGCGAGGGAACACCCCTCTCCATTTGGCTGCAGCACAGGGGAATGTGAGAATGTGCAAATGCATTGCCGAAGGCCGTGCTTATTTGGTTGGTATTCTCAACAAAGATAAAGAGACCCCTCTCTTCTTGGCTGCTCTCCATGGTAAAAAAGATGCCTTCTTGTGGCTCCACTACATTTGTACTCCTGATGATTCTCATCCAAAATGCTACAATTACTGTAGGAGGGGTGATGGAGAGACTATCTTGCACTGTTCAATTTCTGCGGAATACTATGACTTGGCATATCAGATAATTAACCTGTATGAAGATCTAGTTAAGTATGTTAATGAAGTTGGGTTTTCCCCTCTCCATCTTCTGGCGAGTCAGCCTTCTGCCTTCAGAAGTGGTAGCCACCTTAGCCCTTGGAACAGAATCATCTACAACTGGTCTAAGGAGATACGGAAGCTAAGGAACAAGAAAGAAAAGCACAAATGGTCTGTTCAGATCATGGACAAGCTACTAAAAAGTGCTTCGACGTATGAATATGAAGACAGTGGTATGAACCCGCAGGCAGCAACAACTGATGAAACAAGTCCTTACAAAATTTCTGATGGTGGCGACCGTATCACCCTTGGAAGCATTGAACCTAGTACTACTGATCACCAACAAAACGAAAACAAAGGAAACAACGGAACCATTGGTCAAGACCAAAGAGGAGTCATGAGAGAAGGGTCGTTGCCGCCAGAGGTGTCGACAGAGAAGAAAAACCCTGAGATGGAAAAGAAGGAAACACCGATATTGATTGCTGCGAAGAATGGCGTCACTGAAATGGTCGAGAAGATCCTAGAGCTTTTTCCAGTGGCCATACATGACCTTAATGCACAGAAAAAGAATATAGTTCTGTTGGCTGTGGAGAACAGGCAATCCCATGTGTACCAACTCCTGCTAAAGAGAAAGATCATGAAAGAAAGCATTTTCTGCAAAGTGGATAATGATGGCAATAGTGCATTACACCTTGCAGCAAAGTTGGGGGATTACAAGCCTTGGCTAATTCCCGGTGCTGCCTTGCAAATGCAATGGGAAATCAAGTGGTATGAGTTCGTGAAAACCTCAATGCCGTTCCACTTCTTCGTCCGCTACAACAAGGAAAGCCAAACCGCAAGGGACATCTTCACCAAAACCCACACCCAGATCGTCAAAGACGGCGGCAATTGGCTGATCAACACCTCCCAGTCCTGCTCCGTCGTCGCCACCCTCATCGCCACAGTCGCCTTCGCCACTGCCTCCACCGTCCCCGGCGGCACCAAAGAGGACAACGGCGAGCCCACCCTTGAAAACCATCCGGCTTTCGACATCTTCGCCATCGCCTCTCTCGTCGCCCTTTGCTTCTCCGTCACGGCAATGGTAATGTTCCTGGCCATTCTGACGTCACGGTATCAGGAGAGGGACTTCGGGAAAGCGCTGCCGAGGAAGCTCCTGTTTGGCCTGACGTCGCTGTTTTTGTCCATCGCTTCGATACTGATATCGTTTTGTGCCGGACACTTCTTCTTGCTCAAAGATGAGCTGAAATATGCCGCGTTTCCGGTTTATGCAATAACGTGTTTGCCGGTGTCGTTTTTCGCTATGGCGCAGTTTCCGTTGTACGTTGATCTGGTGTGGGCTACGTTTAAGAAGGTGCCGCAGCGGAGTTACAAGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0000166 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006888 GO:0006900 GO:0006901 GO:0006903 GO:0006915 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0006996 GO:0007154 GO:0007165 GO:0007166 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0008625 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010469 GO:0010506 GO:0010508 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010646 GO:0010648 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012501 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017075 GO:0017076 GO:0017148 GO:0019222 GO:0019538 GO:0019905 GO:0022607 GO:0022898 GO:0023051 GO:0023052 GO:0023057 GO:0030162 GO:0030554 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032270 GO:0032409 GO:0032412 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033194 GO:0033554 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034599 GO:0034762 GO:0034765 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0042221 GO:0042802 GO:0042981 GO:0043065 GO:0043066 GO:0043067 GO:0043068 GO:0043069 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043269 GO:0043280 GO:0043281 GO:0043412 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045862 GO:0046777 GO:0046907 GO:0048193 GO:0048194 GO:0048199 GO:0048207 GO:0048208 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051248 GO:0051336 GO:0051345 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0060548 GO:0061024 GO:0065003 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071447 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090114 GO:0097159 GO:0097190 GO:0097191 GO:0097367 GO:0099601 GO:0140096 GO:1900449 GO:1901265 GO:1901363 GO:1901564 GO:1901700 GO:1901701 GO:1902041 GO:1902042 GO:1904062 GO:2000112 GO:2000113 GO:2000116 GO:2000310 GO:2001056 GO:2001233 GO:2001234 GO:2001236 GO:2001237 GO:2001257
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

649

Amino Acids

73.34

Weight (kDa)

8.6

Isoelectric Point (pI)

35.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 86 - 146 7.9e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 350 - 429 3.7e-07 Ankyrin repeats (3 copies)
PGG PF13962 487 - 599 3.2e-28 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 1679, 1742
AccB1I GGYRCC 2 cut(s) 1550, 1924
AccB7I CCANNNNNTGG 1 cut(s) 625
AccBSI CCGCTC 1 cut(s) 136
AccI GTMKAC 1 cut(s) 1001
AccII CGCG 1 cut(s) 1826
AclWI GGATC 2 cut(s) 161, 1084
AcoI YGGCCR 3 cut(s) 199, 1110, 1665
AcsI RAATTY 1 cut(s) 852
AcuI CTGAAG 1 cut(s) 631
AcyI GRCGYC 3 cut(s) 1068, 1676, 1739
AfaI GTAC 4 cut(s) 451, 901, 1184, 1892
AfeI AGCGCT 1 cut(s) 1710
AfiI CCNNNNNNNGG 3 cut(s) 432, 625, 1024
AflIII ACRYGT 1 cut(s) 1847
AgsI TTSAA 3 cut(s) 525, 893, 1583
AhlI ACTAGT 1 cut(s) 223
AjnI CCWGG 1 cut(s) 1662
AloI GAACNNNNNNTCC 2 cut(s) 1157, 1189
AluBI AGCT 7 cut(s) 232, 250, 715, 766, 1099, 1723, 1813
AluI AGCT 7 cut(s) 232, 250, 715, 766, 1099, 1723, 1813
Alw26I GTCTC 2 cut(s) 377, 500
AlwI GGATC 2 cut(s) 161, 1084
Aor51HI AGCGCT 1 cut(s) 1710
AoxI GGCC 5 cut(s) 199, 343, 1110, 1665, 1732
ApeKI GCWGC 9 cut(s) 299, 302, 401, 821, 1055, 1268, 1310, 1711, 1930
ApoI RAATTY 1 cut(s) 852
AspLEI GCGC 2 cut(s) 1711, 1879
AsuC2I CCSGG 2 cut(s) 1305, 1545
AsuHPI GGTGA 6 cut(s) 148, 179, 509, 868, 902, 1414
BalI TGGCCA 2 cut(s) 1112, 1667
BanI GGYRCC 2 cut(s) 1550, 1924
BanII GRGCYC 2 cut(s) 142, 1575
BbsI GAAGAC 1 cut(s) 804
BbvI GCAGC 9 cut(s) 286, 314, 388, 833, 1042, 1280, 1297, 1698, 1942
BccI CCATC 8 cut(s) 494, 627, 854, 1018, 1238, 1596, 1619, 1763
BceAI ACGGC 6 cut(s) 214, 330, 1351, 1468, 1582, 1662
BcgI CGANNNNNNTGC 2 cut(s) 329, 363
BciT130I CCWGG 1 cut(s) 1664
BclI TGATCA 2 cut(s) 907, 1467
BcnI CCSGG 2 cut(s) 1305, 1545
BcoDI GTCTC 2 cut(s) 377, 500
BcuI ACTAGT 1 cut(s) 223
BfaI CTAG 4 cut(s) 224, 581, 897, 1094
BfmI CTRYAG 2 cut(s) 300, 487
BfoI RGCGCY 1 cut(s) 1712
BglII AGATCT 1 cut(s) 577
BmcAI AGTACT 1 cut(s) 901
Bme1390I CCNGG 3 cut(s) 1305, 1545, 1664
BmiI GGNNCC 4 cut(s) 437, 943, 1552, 1926
BmrFI CCNGG 3 cut(s) 1305, 1545, 1664
BmrI ACTGGG 1 cut(s) 1474
BmsI GCATC 2 cut(s) 69, 412
BmuI ACTGGG 1 cut(s) 1474
BpiI GAAGAC 1 cut(s) 804
Bpu10I CCTNAGC 2 cut(s) 665, 716
BpuMI CCSGG 2 cut(s) 1305, 1545
BsaBI GATNNNNATC 1 cut(s) 465
BsaHI GRCGYC 3 cut(s) 1068, 1676, 1739
BsaI GGTCTC 1 cut(s) 377
BsaJI CCNNGG 6 cut(s) 409, 671, 880, 1292, 1543, 1715
BsaWI WCCGGW 1 cut(s) 1831
Bsc4I CCNNNNNNNGG 3 cut(s) 432, 625, 1024
Bse118I RCCGGY 1 cut(s) 1855
Bse1I ACTGG 4 cut(s) 31, 698, 1106, 1480
Bse3DI GCAATG 4 cut(s) 176, 333, 1331, 1656
Bse8I GATNNNNATC 1 cut(s) 465
BseBI CCWGG 1 cut(s) 1664
BseDI CCNNGG 6 cut(s) 409, 671, 880, 1292, 1543, 1715
BseGI GGATG 2 cut(s) 466, 1588
BseJI GATNNNNATC 1 cut(s) 465
BseLI CCNNNNNNNGG 3 cut(s) 432, 625, 1024
BseMI GCAATG 4 cut(s) 176, 333, 1331, 1656
BseMII CTCAG 1 cut(s) 1011
BseNI ACTGG 4 cut(s) 31, 698, 1106, 1480
BseRI GAGGAG 1 cut(s) 978
BseXI GCAGC 9 cut(s) 286, 314, 388, 833, 1042, 1280, 1297, 1698, 1942
Bsh1236I CGCG 1 cut(s) 1826
Bsh1285I CGRYCG 1 cut(s) 871
BshFI GGCC 5 cut(s) 201, 345, 1112, 1667, 1734
BshNI GGYRCC 2 cut(s) 1550, 1924
BsiEI CGRYCG 1 cut(s) 871
BsiSI CCGG 6 cut(s) 1305, 1545, 1592, 1785, 1832, 1856
BslFI GGGAC 3 cut(s) 1427, 1526, 1709
BslI CCNNNNNNNGG 3 cut(s) 432, 625, 1024
BsmAI GTCTC 2 cut(s) 377, 500
BsmFI GGGAC 3 cut(s) 1427, 1526, 1709
BsnI GGCC 5 cut(s) 201, 345, 1112, 1667, 1734
Bso31I GGTCTC 1 cut(s) 377
Bsp1286I GDGCHC 2 cut(s) 142, 1575
Bsp143I GATC 9 cut(s) 153, 577, 753, 907, 1089, 1206, 1440, 1467, 1897
Bsp19I CCATGG 1 cut(s) 409
BspANI GGCC 5 cut(s) 201, 345, 1112, 1667, 1734
BspCNI CTCAG 1 cut(s) 1012
BspFNI CGCG 1 cut(s) 1826
BspHI TCATGA 2 cut(s) 969, 1209
BspLI GGNNCC 4 cut(s) 437, 943, 1552, 1926
BspMAI CTGCAG 1 cut(s) 304
BspPI GGATC 2 cut(s) 161, 1084
BspT107I GGYRCC 2 cut(s) 1550, 1924
BspTNI GGTCTC 1 cut(s) 377
BsrBI CCGCTC 1 cut(s) 136
BsrDI GCAATG 4 cut(s) 176, 333, 1331, 1656
BsrFI RCCGGY 1 cut(s) 1855
BsrI ACTGG 4 cut(s) 31, 698, 1106, 1480
BssAI RCCGGY 1 cut(s) 1855
BssECI CCNNGG 6 cut(s) 409, 671, 880, 1292, 1543, 1715
BssMI GATC 9 cut(s) 153, 577, 753, 907, 1089, 1206, 1440, 1467, 1897
BssNI GRCGYC 3 cut(s) 1068, 1676, 1739
BssT1I CCWWGG 4 cut(s) 409, 671, 880, 1292
Bst2UI CCWGG 1 cut(s) 1664
Bst4CI ACNGT 8 cut(s) 53, 488, 521, 803, 872, 1516, 1540, 1683
Bst6I CTCTTC 1 cut(s) 398
BstACI GRCGYC 3 cut(s) 1068, 1676, 1739
BstAPI GCANNNNNTGC 1 cut(s) 1227
BstC8I GCNNGC 3 cut(s) 138, 819, 1571
BstDEI CTNAG 4 cut(s) 665, 699, 716, 1020
BstDSI CCRYGG 1 cut(s) 409
BstF5I GGATG 2 cut(s) 466, 1588
BstFNI CGCG 1 cut(s) 1826
BstH2I RGCGCY 1 cut(s) 1712
BstHHI GCGC 2 cut(s) 1711, 1879
BstKTI GATC 9 cut(s) 156, 580, 756, 910, 1092, 1209, 1443, 1470, 1900
BstMAI GTCTC 2 cut(s) 377, 500
BstMBI GATC 9 cut(s) 153, 577, 753, 907, 1089, 1206, 1440, 1467, 1897
BstMCI CGRYCG 1 cut(s) 871
BstMWI GCNNNNNNNGC 6 cut(s) 133, 146, 666, 1227, 1517, 1720
BstNI CCWGG 1 cut(s) 1664
BstSCI CCNGG 3 cut(s) 1303, 1543, 1662
BstSFI CTRYAG 2 cut(s) 300, 487
BstUI CGCG 1 cut(s) 1826
BstV1I GCAGC 9 cut(s) 286, 314, 388, 833, 1042, 1280, 1297, 1698, 1942
BstV2I GAAGAC 1 cut(s) 804
BstX2I RGATCY 2 cut(s) 577, 1089
BstYI RGATCY 2 cut(s) 577, 1089
BsuRI GGCC 5 cut(s) 201, 345, 1112, 1667, 1734
BtgI CCRYGG 1 cut(s) 409
BtgZI GCGATG 3 cut(s) 1492, 1597, 1741
BtsCI GGATG 2 cut(s) 466, 1588
BtsI GCAGTG 2 cut(s) 195, 1527
BtsIMutI CAGTG 7 cut(s) 58, 195, 517, 808, 1071, 1113, 1527
Cac8I GCNNGC 3 cut(s) 138, 819, 1571
CciI TCATGA 2 cut(s) 969, 1209
CfoI GCGC 2 cut(s) 1711, 1879
Cfr10I RCCGGY 1 cut(s) 1855
CseI GACGC 2 cut(s) 262, 1057
Csp6I GTAC 4 cut(s) 450, 900, 1183, 1891
CspCI CAANNNNNGTGG 2 cut(s) 428, 463
CviQI GTAC 4 cut(s) 450, 900, 1183, 1891
DdeI CTNAG 4 cut(s) 665, 699, 716, 1020
DpnI GATC 9 cut(s) 155, 579, 755, 909, 1091, 1208, 1442, 1469, 1899
DpnII GATC 9 cut(s) 153, 577, 753, 907, 1089, 1206, 1440, 1467, 1897
EaeI YGGCCR 3 cut(s) 199, 1110, 1665
Eam1104I CTCTTC 1 cut(s) 398
EarI CTCTTC 1 cut(s) 398
Eco130I CCWWGG 4 cut(s) 409, 671, 880, 1292
Eco24I GRGCYC 2 cut(s) 142, 1575
Eco31I GGTCTC 1 cut(s) 377
Eco32I GATATC 1 cut(s) 1773
Eco47III AGCGCT 1 cut(s) 1710
Eco57I CTGAAG 1 cut(s) 631
EcoRII CCWGG 1 cut(s) 1662
EcoRV GATATC 1 cut(s) 1773
EcoT14I CCWWGG 4 cut(s) 409, 671, 880, 1292
EcoT22I ATGCAT 1 cut(s) 335
EcoT38I GRGCYC 2 cut(s) 142, 1575
ErhI CCWWGG 4 cut(s) 409, 671, 880, 1292
FalI AAGNNNNNCTT 2 cut(s) 56, 88
FaqI GGGAC 3 cut(s) 1427, 1526, 1709
FauI CCCGC 2 cut(s) 129, 822
FbaI TGATCA 2 cut(s) 907, 1467
FblI GTMKAC 1 cut(s) 1001
FokI GGATG 2 cut(s) 453, 1575
FriOI GRGCYC 2 cut(s) 142, 1575
FspBI CTAG 4 cut(s) 224, 581, 897, 1094
GlaI GCGC 2 cut(s) 1710, 1878
HaeII RGCGCY 1 cut(s) 1712
HaeIII GGCC 5 cut(s) 201, 345, 1112, 1667, 1734
HapII CCGG 6 cut(s) 1305, 1545, 1592, 1785, 1832, 1856
HgaI GACGC 2 cut(s) 262, 1057
HhaI GCGC 2 cut(s) 1711, 1879
Hin1I GRCGYC 3 cut(s) 1068, 1676, 1739
Hin6I GCGC 2 cut(s) 1709, 1877
HinP1I GCGC 2 cut(s) 1709, 1877
HincII GTYRAC 1 cut(s) 1002
HindII GTYRAC 1 cut(s) 1002
HinfI GANTC 4 cut(s) 461, 631, 681, 966
HpaII CCGG 6 cut(s) 1305, 1545, 1592, 1785, 1832, 1856
HphI GGTGA 6 cut(s) 148, 179, 509, 868, 902, 1414
Hpy166II GTNNAC 2 cut(s) 1002, 1183
Hpy188I TCNGA 8 cut(s) 14, 116, 196, 558, 650, 753, 859, 1674
Hpy8I GTNNAC 2 cut(s) 1002, 1183
Hpy99I CGWCG 5 cut(s) 787, 1496, 1499, 1628, 1744
HpyAV CCTTC 8 cut(s) 335, 436, 648, 655, 971, 1027, 1531, 1915
HpyCH4III ACNGT 8 cut(s) 53, 488, 521, 803, 872, 1516, 1540, 1683
HpyCH4IV ACGT 6 cut(s) 785, 1676, 1739, 1847, 1893, 1913
HpyF10VI GCNNNNNNNGC 6 cut(s) 133, 146, 666, 1227, 1517, 1720
HpyF3I CTNAG 4 cut(s) 665, 699, 716, 1020
HpySE526I ACGT 6 cut(s) 785, 1676, 1739, 1847, 1893, 1913
Hsp92I GRCGYC 3 cut(s) 1068, 1676, 1739
HspAI GCGC 2 cut(s) 1709, 1877
Ksp22I TGATCA 2 cut(s) 907, 1467
Kzo9I GATC 9 cut(s) 153, 577, 753, 907, 1089, 1206, 1440, 1467, 1897
LmnI GCTCC 4 cut(s) 247, 441, 1493, 1728
Lsp1109I GCAGC 9 cut(s) 286, 314, 388, 833, 1042, 1280, 1297, 1698, 1942
LweI GCATC 2 cut(s) 69, 412
MaeI CTAG 4 cut(s) 224, 581, 897, 1094
MaeII ACGT 6 cut(s) 785, 1676, 1739, 1847, 1893, 1913
MaeIII GTNAC 5 cut(s) 167, 1069, 1642, 1677, 1937
MalI GATC 9 cut(s) 155, 579, 755, 909, 1091, 1208, 1442, 1469, 1899
MbiI CCGCTC 1 cut(s) 136
MboI GATC 9 cut(s) 153, 577, 753, 907, 1089, 1206, 1440, 1467, 1897
MfeI CAATTG 1 cut(s) 1459
MflI RGATCY 2 cut(s) 577, 1089
MhlI GDGCHC 2 cut(s) 142, 1575
MlsI TGGCCA 2 cut(s) 1112, 1667
MluCI AATT 7 cut(s) 210, 481, 525, 561, 852, 1299, 1459
MluNI TGGCCA 2 cut(s) 1112, 1667
MlyI GAGTC 2 cut(s) 640, 975
MmeI TCCRAC 1 cut(s) 174
Mox20I TGGCCA 2 cut(s) 1112, 1667
Mph1103I ATGCAT 1 cut(s) 335
MscI TGGCCA 2 cut(s) 1112, 1667
MseI TTAA 5 cut(s) 564, 585, 594, 1125, 1917
MslI CAYNNNNRTG 3 cut(s) 188, 1076, 1649
Msp20I TGGCCA 2 cut(s) 1112, 1667
MspA1I CMGCKG 1 cut(s) 1933
MspI CCGG 6 cut(s) 1305, 1545, 1592, 1785, 1832, 1856
MspR9I CCNGG 3 cut(s) 1305, 1545, 1664
MunI CAATTG 1 cut(s) 1459
MvaI CCWGG 1 cut(s) 1664
MvnI CGCG 1 cut(s) 1826
MwoI GCNNNNNNNGC 6 cut(s) 133, 146, 666, 1227, 1517, 1720
NciI CCSGG 2 cut(s) 1305, 1545
NcoI CCATGG 1 cut(s) 409
NdeII GATC 9 cut(s) 153, 577, 753, 907, 1089, 1206, 1440, 1467, 1897
NlaIV GGNNCC 4 cut(s) 437, 943, 1552, 1926
NmeAIII GCCGAG 1 cut(s) 1740
NmuCI GTSAC 4 cut(s) 167, 1069, 1642, 1677
NsiI ATGCAT 1 cut(s) 335
PagI TCATGA 2 cut(s) 969, 1209
PcsI WCGNNNNNNNCGW 1 cut(s) 1620
PfeI GAWTC 2 cut(s) 461, 681
PflMI CCANNNNNTGG 1 cut(s) 625
PleI GAGTC 2 cut(s) 639, 974
PpsI GAGTC 2 cut(s) 639, 974
Psp6I CCWGG 1 cut(s) 1662
PspGI CCWGG 1 cut(s) 1662
PspN4I GGNNCC 4 cut(s) 437, 943, 1552, 1926
PstI CTGCAG 1 cut(s) 304
PsuI RGATCY 2 cut(s) 577, 1089
RsaI GTAC 4 cut(s) 451, 901, 1184, 1892
RsaNI GTAC 4 cut(s) 450, 900, 1183, 1891
RseI CAYNNNNRTG 3 cut(s) 188, 1076, 1649
SalI GTCGAC 1 cut(s) 1000
SaqAI TTAA 5 cut(s) 564, 585, 594, 1125, 1917
Sau3AI GATC 9 cut(s) 153, 577, 753, 907, 1089, 1206, 1440, 1467, 1897
ScaI AGTACT 1 cut(s) 901
SchI GAGTC 2 cut(s) 640, 975
ScrFI CCNGG 3 cut(s) 1305, 1545, 1664
SduI GDGCHC 2 cut(s) 142, 1575
SfaNI GCATC 2 cut(s) 69, 412
SfcI CTRYAG 2 cut(s) 300, 487
SmiMI CAYNNNNRTG 3 cut(s) 188, 1076, 1649
SpeI ACTAGT 1 cut(s) 223
Sse9I AATT 7 cut(s) 210, 481, 525, 561, 852, 1299, 1459
SspMI CTAG 4 cut(s) 224, 581, 897, 1094
StyD4I CCNGG 3 cut(s) 1303, 1543, 1662
StyI CCWWGG 4 cut(s) 409, 671, 880, 1292
TaaI ACNGT 8 cut(s) 53, 488, 521, 803, 872, 1516, 1540, 1683
TaiI ACGT 6 cut(s) 788, 1679, 1742, 1850, 1896, 1916
TaqI TCGA 5 cut(s) 782, 1001, 1083, 1599, 1763
TasI AATT 7 cut(s) 210, 481, 525, 561, 852, 1299, 1459
TatI WGTACW 2 cut(s) 449, 899
TauI GCSGC 5 cut(s) 991, 1458, 1551, 1826, 1930
TfiI GAWTC 2 cut(s) 461, 681
Tru1I TTAA 5 cut(s) 564, 585, 594, 1125, 1917
Tru9I TTAA 5 cut(s) 564, 585, 594, 1125, 1917
TscAI CASTG 7 cut(s) 58, 195, 524, 808, 1078, 1113, 1534
TseFI GTSAC 4 cut(s) 167, 1069, 1642, 1677
TseI GCWGC 9 cut(s) 299, 302, 401, 821, 1055, 1268, 1310, 1711, 1930
Tsp45I GTSAC 4 cut(s) 167, 1069, 1642, 1677
TspDTI ATGAA 8 cut(s) 104, 588, 612, 804, 810, 824, 849, 1226
TspGWI ACGGA 5 cut(s) 724, 954, 1480, 1630, 1875
TspRI CASTG 7 cut(s) 58, 195, 524, 808, 1078, 1113, 1534
Van91I CCANNNNNTGG 1 cut(s) 625
XapI RAATTY 1 cut(s) 852
XcmI CCANNNNNNNNNTGG 1 cut(s) 28
XmiI GTMKAC 1 cut(s) 1001
XspI CTAG 4 cut(s) 224, 581, 897, 1094
ZraI GACGTC 2 cut(s) 1677, 1740
ZrmI AGTACT 1 cut(s) 901
Zsp2I ATGCAT 1 cut(s) 335
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.