Rw0G000900

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00026
OG0000723
Physical Location & Seq
Reverse (-)
18565 .. 24294
5730 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G000900.1

Sequence Viewer

Length: 2223 bp
ATGTCTTCTGCCACAAATACCATGACCGGCATGGACCGTGACAGCATCAAGGAACACTTGTTCAAGATAGCCATGAAAAGCCAATGGGAAGAAGTTGTCCAAGCATACAGGCAAAGCAATAACCTGGCTCGTGAGGCAAAGATCACCAAGTCAGGTTACACAGCATTGCACATAGCAGTGTCGGACGGCCAAGAGGAATATGTTGAGAAACTAGTAAAGCTGGTTTCCAAAAACGAGCTGGAAATCCAAAATGAGCGAGGGAACACCCCTCTCCATTTGGCTGCAGCACAGGGGAATGTGAGAATGTGCGAATGCATTGCCAAAGATCATCCTTCTTTGGTTGGTATTCTCAACAACCATAAAGAGACCCCTCTCTTCTTGGCTGCTCTCCATGGGAAAAAAGATGCCTTCTTGTGTCTTCACTACATTTGTACTCCGGGCAAGTCTCAGCCAAACTACAGTTACTGTAGGAGGCAGGATGGAGAGACTATCTTGCATTGTGCAATTGCTGGTGACTACTTTGATTTGGCATTTCAGATAATAGCCCTGTATAGAGATCTAGTTAATTCTGTTAATGAAGATGGGTTTTCCCCTCTCCATCTTCTGGCGAGTAAGCCTTCCGCTTTCAAAAGTGGTAGCTACCTTAGACCTTGGAGCAAAATCATTTACCACTGTATATTGGTCGATGAGCTGAAAGTGGAAGAAGCAGATCACTTCCATGAGCGGGTAATTAATACAATTAACTCTGAAAATGCTCCAAAATACCCAGAAAACTACAAAACCTGCATCAACTTCTTGCTAGTGTTCTGGAAGATGGCTCAAGTATTTGATAATGTTACTCGTAAAGAAGGAAAAGGAACTACAGATCCAGAGAATCCTGAACCTAAAGGAGGAAATCCAGGTCATTACAATGCCTGCTTTGATTATGTAGATCCAGAGAAACCTGAACCTAAAGGAGGAAATCCAGGTCATTACAATGCCTGCTTTGATTATGTCAAGCTTTTATCGAAGGCAATGCTGATTGTTCTTGGACTTGGCGGGTCGACGGAGATACAGAAGATAAGGAACAACAAAGAAAAGCACAAATGGGCTGTTCAGATCATGAACAAGCTACTAAAAAGTTCTTCGATGTATGAATATGAAGACAGTGGTATGAACCCGCAGGCAGCAACAGCTGATGAAACAAGTCCTTACAAAATTTCTGATGGTGGCGACCGTATCACCCTTGGAAGCATTGAAGAACAAAAAGGAGGCATTCGAGAAGGGTCATTGCCGCCAGAAGTGACGCAGAATAAAACCCCTGAGATGGAAAAGAAGGAAACACCGATATTGATTGCTGCGAAAAATGGCATCACCGAAATGGTCGAGAAGATCCTAGAGCTTTTTCCAGTGGCCATCCATGACCTTAATGCACAGAAAAAGAATATAGTTCTGTTGGCAGTGGAGAACAGGCAACCCCATGTGTACCAACTCTTGCTAAGGAGAAAGACCACGAAAGATAGCGTTTTCCGCAAAGTGGATAAAGATGGTAATAGTGCATTACACCTTGCAGCAAAGTTAGGAGGATACAAGCCTTGGCTAATTCCCGGTGCTGCTTTGCAAATGCATTGGGAAATCAAGTGGTATGAGTTCGTGAAAAACTCCATGCCACGACACTTCTTTGTCAGATACAATATGAAACAGCAGACTGCAATGGATATGCTCATTGAAACCCACACTGACCTTGTCAGAGGTGGGACGGAGTGGCTCTACAAGACCTCCGAGTCCTGCTCCGTCCTGGCTGCCCTGATTGTCACCGTAGCCTTTGCCACAGCTACTACCGTTCCGGGTGGCATCAATCAGGATACTGGCAGGCCAACCTTCGAAAACCACCGAGGCTTTGAACTGTATACCCTGTCATCACTTGCTGCTGTCTGCTTCTCATTCACTTCCATGGTCATATTCCTATCCATCGTCATGTCTCAAACCGAACAAGAGGATTTCGGAGAAGCAGTGCCGAGGAAGCTTTTGCTGGGCATAACAACCCTCTTCTTGTCCATGGTTGCCATGCTGATGTCGTTTTGCATTGGACATTCCTTTATACTTAAACATAATCGCAAGTACGCTGCATTTCCAGTTTATGTCGTATCGTGCTCCCCTATAGCTTATTTTGTGATACTGCAGTTTCCAGTGTATTATAATCTCGTAGGGACCTACTTTAAAGTAGTGCCCGTCCGAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0000166 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006888 GO:0006900 GO:0006901 GO:0006903 GO:0006915 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0006996 GO:0007154 GO:0007165 GO:0007166 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0008625 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010469 GO:0010506 GO:0010508 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010646 GO:0010648 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012501 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017075 GO:0017076 GO:0017148 GO:0019222 GO:0019538 GO:0019905 GO:0022607 GO:0022898 GO:0023051 GO:0023052 GO:0023057 GO:0030162 GO:0030554 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032270 GO:0032409 GO:0032412 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033194 GO:0033554 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034599 GO:0034762 GO:0034765 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0042221 GO:0042802 GO:0042981 GO:0043065 GO:0043066 GO:0043067 GO:0043068 GO:0043069 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043269 GO:0043280 GO:0043281 GO:0043412 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045862 GO:0046777 GO:0046907 GO:0048193 GO:0048194 GO:0048199 GO:0048207 GO:0048208 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051248 GO:0051336 GO:0051345 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0060548 GO:0061024 GO:0065003 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071447 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090114 GO:0097159 GO:0097190 GO:0097191 GO:0097367 GO:0099601 GO:0140096 GO:1900449 GO:1901265 GO:1901363 GO:1901564 GO:1901700 GO:1901701 GO:1902041 GO:1902042 GO:1904062 GO:2000112 GO:2000113 GO:2000116 GO:2000310 GO:2001056 GO:2001233 GO:2001234 GO:2001236 GO:2001237 GO:2001257
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

740

Amino Acids

83.35

Weight (kDa)

7.58

Isoelectric Point (pI)

38.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 73 - 138 1.2e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 444 - 521 4.6e-06 Ankyrin repeats (3 copies)
PGG PF13962 581 - 692 1.1e-22 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2178
AasI GACNNNNNNGTC 1 cut(s) 1762
Acc36I ACCTGC 1 cut(s) 791
AccB7I CCANNNNNTGG 1 cut(s) 604
AccBSI CCGCTC 1 cut(s) 724
AccI GTMKAC 2 cut(s) 1043, 1889
AciI CCGC 6 cut(s) 621, 724, 1038, 1160, 1274, 1510
AclWI GGATC 3 cut(s) 860, 926, 1366
AcoI YGGCCR 2 cut(s) 187, 1392
AcsI RAATTY 1 cut(s) 1197
AfaI GTAC 3 cut(s) 433, 1466, 2102
AfiI CCNNNNNNNGG 6 cut(s) 604, 724, 890, 956, 1306, 1516
AgsI TTSAA 5 cut(s) 64, 628, 1238, 1709, 1883
AhlI ACTAGT 1 cut(s) 211
AjnI CCWGG 4 cut(s) 123, 898, 964, 1776
AloI GAACNNNNNNTCC 4 cut(s) 44, 76, 850, 882
Alw21I GWGCWC 1 cut(s) 2135
Alw26I GTCTC 4 cut(s) 359, 450, 479, 1965
AlwI GGATC 3 cut(s) 860, 926, 1366
AlwNI CAGNNNCTG 1 cut(s) 465
AoxI GGCC 3 cut(s) 187, 1392, 1853
ApoI RAATTY 1 cut(s) 1197
AseI ATTAAT 1 cut(s) 732
AspS9I GGNCC 2 cut(s) 34, 2190
AsuC2I CCSGG 3 cut(s) 438, 1587, 1827
AsuHPI GGTGA 5 cut(s) 136, 524, 1213, 1345, 1786
AsuII TTCGAA 1 cut(s) 1863
AvaII GGWCC 2 cut(s) 34, 2190
BaeGI GKGCMC 1 cut(s) 2211
BaeI ACNNNNGTAYC 2 cut(s) 2147, 2180
BalI TGGCCA 1 cut(s) 1394
BauI CACGAG 1 cut(s) 129
BbsI GAAGAC 2 cut(s) 410, 1149
Bbv12I GWGCWC 1 cut(s) 2135
BccI CCATC 9 cut(s) 473, 575, 606, 808, 1199, 1300, 1403, 1520, 1958
BceAI ACGGC 1 cut(s) 202
BcgI CGANNNNNNTGC 4 cut(s) 299, 333, 997, 1031
BciT130I CCWGG 4 cut(s) 125, 900, 966, 1778
BciVI GTATCC 2 cut(s) 1559, 1837
BcnI CCSGG 3 cut(s) 438, 1587, 1827
BcoDI GTCTC 4 cut(s) 359, 450, 479, 1965
BcuI ACTAGT 1 cut(s) 211
BfaI CTAG 4 cut(s) 212, 560, 800, 1376
BfmI CTRYAG 6 cut(s) 282, 457, 466, 861, 2139, 2159
BfuAI ACCTGC 1 cut(s) 791
BfuI GTATCC 2 cut(s) 1559, 1837
BglII AGATCT 1 cut(s) 556
Bme1390I CCNGG 7 cut(s) 125, 438, 900, 966, 1587, 1778, 1827
Bme18I GGWCC 2 cut(s) 34, 2190
BmgT120I GGNCC 2 cut(s) 34, 2190
BmiI GGNNCC 1 cut(s) 2191
BmrFI CCNGG 7 cut(s) 125, 438, 900, 966, 1587, 1778, 1827
BmsI GCATC 5 cut(s) 54, 394, 795, 1359, 1842
BpiI GAAGAC 2 cut(s) 410, 1149
BplI GAGNNNNNCTC 2 cut(s) 1754, 1786
Bpu10I CCTNAGC 1 cut(s) 1478
Bpu14I TTCGAA 1 cut(s) 1863
BpuEI CTTGAG 1 cut(s) 804
BpuMI CCSGG 3 cut(s) 438, 1587, 1827
BsaI GGTCTC 1 cut(s) 359
BsaJI CCNNGG 8 cut(s) 391, 650, 1225, 1574, 1873, 1932, 1997, 2037
BsaXI ACNNNNNCTCC 4 cut(s) 1742, 1772, 1977, 2007
Bsc4I CCNNNNNNNGG 6 cut(s) 604, 724, 890, 956, 1306, 1516
Bse118I RCCGGY 1 cut(s) 26
Bse1I ACTGG 4 cut(s) 1388, 1852, 2114, 2168
Bse3DI GCAATG 5 cut(s) 164, 315, 1020, 1268, 1698
BseBI CCWGG 4 cut(s) 125, 900, 966, 1778
BseDI CCNNGG 8 cut(s) 391, 650, 1225, 1574, 1873, 1932, 1997, 2037
BseGI GGATG 3 cut(s) 328, 484, 1395
BseLI CCNNNNNNNGG 6 cut(s) 604, 724, 890, 956, 1306, 1516
BseMI GCAATG 5 cut(s) 164, 315, 1020, 1268, 1698
BseMII CTCAG 2 cut(s) 461, 1293
BseNI ACTGG 4 cut(s) 1388, 1852, 2114, 2168
BseSI GKGCMC 1 cut(s) 2211
BseYI CCCAGC 1 cut(s) 2011
Bsh1285I CGRYCG 1 cut(s) 1216
BshFI GGCC 3 cut(s) 189, 1394, 1855
BsiEI CGRYCG 1 cut(s) 1216
BsiHKAI GWGCWC 1 cut(s) 2135
BsiSI CCGG 4 cut(s) 27, 437, 1587, 1826
BslFI GGGAC 2 cut(s) 1750, 2203
BslI CCNNNNNNNGG 6 cut(s) 604, 724, 890, 956, 1306, 1516
BsmAI GTCTC 4 cut(s) 359, 450, 479, 1965
BsmFI GGGAC 2 cut(s) 1750, 2203
BsmI GAATGC 2 cut(s) 317, 1254
BsnI GGCC 3 cut(s) 189, 1394, 1855
Bso31I GGTCTC 1 cut(s) 359
Bsp119I TTCGAA 1 cut(s) 1863
Bsp1286I GDGCHC 2 cut(s) 2135, 2211
Bsp143I GATC 8 cut(s) 141, 325, 556, 709, 865, 931, 1098, 1371
Bsp19I CCATGG 3 cut(s) 391, 1932, 2037
BspACI CCGC 6 cut(s) 621, 724, 1038, 1160, 1274, 1510
BspANI GGCC 3 cut(s) 189, 1394, 1855
BspCNI CTCAG 2 cut(s) 460, 1294
BspHI TCATGA 1 cut(s) 1101
BspLI GGNNCC 1 cut(s) 2191
BspMAI CTGCAG 2 cut(s) 286, 2163
BspMI ACCTGC 1 cut(s) 791
BspPI GGATC 3 cut(s) 860, 926, 1366
BspT104I TTCGAA 1 cut(s) 1863
BspTNI GGTCTC 1 cut(s) 359
BsrBI CCGCTC 1 cut(s) 724
BsrDI GCAATG 5 cut(s) 164, 315, 1020, 1268, 1698
BsrFI RCCGGY 1 cut(s) 26
BsrI ACTGG 4 cut(s) 1388, 1852, 2114, 2168
BssAI RCCGGY 1 cut(s) 26
BssECI CCNNGG 8 cut(s) 391, 650, 1225, 1574, 1873, 1932, 1997, 2037
BssMI GATC 8 cut(s) 141, 325, 556, 709, 865, 931, 1098, 1371
BssNAI GTATAC 1 cut(s) 1890
BssSI CACGAG 1 cut(s) 129
BssT1I CCWWGG 6 cut(s) 391, 650, 1225, 1574, 1932, 2037
Bst1107I GTATAC 1 cut(s) 1890
Bst2BI CACGAG 1 cut(s) 129
Bst2UI CCWGG 4 cut(s) 125, 900, 966, 1778
Bst4CI ACNGT 9 cut(s) 38, 461, 467, 674, 1148, 1217, 1798, 1822, 1887
Bst6I CTCTTC 2 cut(s) 380, 2033
BstBI TTCGAA 1 cut(s) 1863
BstC8I GCNNGC 4 cut(s) 916, 982, 1164, 1853
BstDEI CTNAG 4 cut(s) 447, 644, 1302, 1478
BstDSI CCRYGG 3 cut(s) 391, 1932, 2037
BstENI CCTNNNNNAGG 2 cut(s) 888, 954
BstF5I GGATG 3 cut(s) 328, 484, 1395
BstKTI GATC 8 cut(s) 144, 328, 559, 712, 868, 934, 1101, 1374
BstMAI GTCTC 4 cut(s) 359, 450, 479, 1965
BstMBI GATC 8 cut(s) 141, 325, 556, 709, 865, 931, 1098, 1371
BstMCI CGRYCG 1 cut(s) 1216
BstMWI GCNNNNNNNGC 4 cut(s) 134, 1172, 1509, 2002
BstNI CCWGG 4 cut(s) 125, 900, 966, 1778
BstSCI CCNGG 7 cut(s) 123, 436, 898, 964, 1585, 1776, 1825
BstSFI CTRYAG 6 cut(s) 282, 457, 466, 861, 2139, 2159
BstSLI GKGCMC 1 cut(s) 2211
BstV2I GAAGAC 2 cut(s) 410, 1149
BstX2I RGATCY 4 cut(s) 556, 865, 931, 1371
BstYI RGATCY 4 cut(s) 556, 865, 931, 1371
BstZ17I GTATAC 1 cut(s) 1890
BsuI GTATCC 2 cut(s) 1559, 1837
BsuRI GGCC 3 cut(s) 189, 1394, 1855
BtgI CCRYGG 3 cut(s) 391, 1932, 2037
BtsCI GGATG 3 cut(s) 328, 484, 1395
BtsI GCAGTG 3 cut(s) 183, 1446, 1998
BtsIMutI CAGTG 8 cut(s) 183, 670, 1153, 1395, 1446, 1716, 1998, 2175
BveI ACCTGC 1 cut(s) 791
Cac8I GCNNGC 4 cut(s) 916, 982, 1164, 1853
CaiI CAGNNNCTG 1 cut(s) 465
CciI TCATGA 1 cut(s) 1101
Cfr10I RCCGGY 1 cut(s) 26
Cfr13I GGNCC 2 cut(s) 34, 2190
CseI GACGC 1 cut(s) 1294
Csp6I GTAC 3 cut(s) 432, 1465, 2101
CviQI GTAC 3 cut(s) 432, 1465, 2101
DdeI CTNAG 4 cut(s) 447, 644, 1302, 1478
DpnI GATC 8 cut(s) 143, 327, 558, 711, 867, 933, 1100, 1373
DpnII GATC 8 cut(s) 141, 325, 556, 709, 865, 931, 1098, 1371
DraI TTTAAA 1 cut(s) 2200
DrdI GACNNNNNNGTC 1 cut(s) 1762
DseDI GACNNNNNNGTC 1 cut(s) 1762
EaeI YGGCCR 2 cut(s) 187, 1392
Eam1104I CTCTTC 2 cut(s) 380, 2033
EarI CTCTTC 2 cut(s) 380, 2033
Eco130I CCWWGG 6 cut(s) 391, 650, 1225, 1574, 1932, 2037
Eco31I GGTCTC 1 cut(s) 359
Eco47I GGWCC 2 cut(s) 34, 2190
EcoNI CCTNNNNNAGG 2 cut(s) 888, 954
EcoO109I RGGNCCY 1 cut(s) 2190
EcoRII CCWGG 4 cut(s) 123, 898, 964, 1776
EcoT14I CCWWGG 6 cut(s) 391, 650, 1225, 1574, 1932, 2037
EcoT22I ATGCAT 2 cut(s) 317, 1608
ErhI CCWWGG 6 cut(s) 391, 650, 1225, 1574, 1932, 2037
FalI AAGNNNNNCTT 2 cut(s) 41, 73
FaqI GGGAC 2 cut(s) 1750, 2203
FauI CCCGC 3 cut(s) 717, 1031, 1167
FblI GTMKAC 2 cut(s) 1043, 1889
FokI GGATG 3 cut(s) 315, 491, 1382
FspBI CTAG 4 cut(s) 212, 560, 800, 1376
GsaI CCCAGC 1 cut(s) 2015
HaeIII GGCC 3 cut(s) 189, 1394, 1855
HapII CCGG 4 cut(s) 27, 437, 1587, 1826
HgaI GACGC 1 cut(s) 1294
HincII GTYRAC 1 cut(s) 1044
HindII GTYRAC 1 cut(s) 1044
HindIII AAGCTT 2 cut(s) 998, 2003
HinfI GANTC 2 cut(s) 874, 1763
HpaII CCGG 4 cut(s) 27, 437, 1587, 1826
HphI GGTGA 5 cut(s) 136, 524, 1213, 1345, 1786
Hpy166II GTNNAC 3 cut(s) 1044, 1465, 1890
Hpy8I GTNNAC 3 cut(s) 1044, 1465, 1890
Hpy99I CGWCG 1 cut(s) 1048
HpyAV CCTTC 8 cut(s) 342, 418, 627, 842, 1003, 1256, 1309, 1870
HpyCH4III ACNGT 9 cut(s) 38, 461, 467, 674, 1148, 1217, 1798, 1822, 1887
HpyF10VI GCNNNNNNNGC 4 cut(s) 134, 1172, 1509, 2002
HpyF3I CTNAG 4 cut(s) 447, 644, 1302, 1478
Kzo9I GATC 8 cut(s) 141, 325, 556, 709, 865, 931, 1098, 1371
LmnI GCTCC 4 cut(s) 654, 760, 1775, 2138
LweI GCATC 5 cut(s) 54, 394, 795, 1359, 1842
MaeI CTAG 4 cut(s) 212, 560, 800, 1376
MaeIII GTNAC 7 cut(s) 38, 155, 461, 512, 835, 1282, 1792
MalI GATC 8 cut(s) 143, 327, 558, 711, 867, 933, 1100, 1373
MbiI CCGCTC 1 cut(s) 724
MboI GATC 8 cut(s) 141, 325, 556, 709, 865, 931, 1098, 1371
MfeI CAATTG 1 cut(s) 504
MflI RGATCY 4 cut(s) 556, 865, 931, 1371
MhlI GDGCHC 2 cut(s) 2135, 2211
MlsI TGGCCA 1 cut(s) 1394
MluCI AATT 6 cut(s) 504, 565, 729, 738, 1197, 1581
MluNI TGGCCA 1 cut(s) 1394
MlyI GAGTC 1 cut(s) 1772
MmeI TCCRAC 1 cut(s) 162
Mox20I TGGCCA 1 cut(s) 1394
Mph1103I ATGCAT 2 cut(s) 317, 1608
MscI TGGCCA 1 cut(s) 1394
MseI TTAA 7 cut(s) 564, 573, 732, 741, 1407, 2085, 2199
MslI CAYNNNNRTG 8 cut(s) 176, 717, 909, 975, 1358, 1931, 1955, 2051
Msp20I TGGCCA 1 cut(s) 1394
MspA1I CMGCKG 1 cut(s) 1175
MspI CCGG 4 cut(s) 27, 437, 1587, 1826
MspR9I CCNGG 7 cut(s) 125, 438, 900, 966, 1587, 1778, 1827
MunI CAATTG 1 cut(s) 504
Mva1269I GAATGC 2 cut(s) 317, 1254
MvaI CCWGG 4 cut(s) 125, 900, 966, 1778
MwoI GCNNNNNNNGC 4 cut(s) 134, 1172, 1509, 2002
NciI CCSGG 3 cut(s) 438, 1587, 1827
NcoI CCATGG 3 cut(s) 391, 1932, 2037
NdeII GATC 8 cut(s) 141, 325, 556, 709, 865, 931, 1098, 1371
NlaIV GGNNCC 1 cut(s) 2191
NmeAIII GCCGAG 1 cut(s) 2022
NmuCI GTSAC 4 cut(s) 38, 512, 1282, 1792
NsiI ATGCAT 2 cut(s) 317, 1608
NspV TTCGAA 1 cut(s) 1863
PagI TCATGA 1 cut(s) 1101
PctI GAATGC 2 cut(s) 317, 1254
PfeI GAWTC 1 cut(s) 874
PflFI GACNNNGTC 1 cut(s) 1724
PflMI CCANNNNNTGG 1 cut(s) 604
PleI GAGTC 1 cut(s) 1771
PpsI GAGTC 1 cut(s) 1771
PpuMI RGGWCCY 1 cut(s) 2190
PshBI ATTAAT 1 cut(s) 732
PsiI TTATAA 1 cut(s) 2178
Psp5II RGGWCCY 1 cut(s) 2190
Psp6I CCWGG 4 cut(s) 123, 898, 964, 1776
PspFI CCCAGC 1 cut(s) 2011
PspGI CCWGG 4 cut(s) 123, 898, 964, 1776
PspN4I GGNNCC 1 cut(s) 2191
PspPI GGNCC 2 cut(s) 34, 2190
PspPPI RGGWCCY 1 cut(s) 2190
PstI CTGCAG 2 cut(s) 286, 2163
PstNI CAGNNNCTG 1 cut(s) 465
PsuI RGATCY 4 cut(s) 556, 865, 931, 1371
PsyI GACNNNGTC 1 cut(s) 1724
PvuII CAGCTG 1 cut(s) 1175
RsaI GTAC 3 cut(s) 433, 1466, 2102
RsaNI GTAC 3 cut(s) 432, 1465, 2101
RseI CAYNNNNRTG 8 cut(s) 176, 717, 909, 975, 1358, 1931, 1955, 2051
SalI GTCGAC 1 cut(s) 1042
SaqAI TTAA 7 cut(s) 564, 573, 732, 741, 1407, 2085, 2199
Sau3AI GATC 8 cut(s) 141, 325, 556, 709, 865, 931, 1098, 1371
Sau96I GGNCC 2 cut(s) 34, 2190
SchI GAGTC 1 cut(s) 1772
ScrFI CCNGG 7 cut(s) 125, 438, 900, 966, 1587, 1778, 1827
SduI GDGCHC 2 cut(s) 2135, 2211
SfaNI GCATC 5 cut(s) 54, 394, 795, 1359, 1842
SfcI CTRYAG 6 cut(s) 282, 457, 466, 861, 2139, 2159
SfuI TTCGAA 1 cut(s) 1863
SinI GGWCC 2 cut(s) 34, 2190
SmiMI CAYNNNNRTG 8 cut(s) 176, 717, 909, 975, 1358, 1931, 1955, 2051
SmlI CTYRAG 1 cut(s) 819
SmoI CTYRAG 1 cut(s) 819
SpeI ACTAGT 1 cut(s) 211
Sse9I AATT 6 cut(s) 504, 565, 729, 738, 1197, 1581
SsiI CCGC 6 cut(s) 621, 724, 1038, 1160, 1274, 1510
SspMI CTAG 4 cut(s) 212, 560, 800, 1376
StyD4I CCNGG 7 cut(s) 123, 436, 898, 964, 1585, 1776, 1825
StyI CCWWGG 6 cut(s) 391, 650, 1225, 1574, 1932, 2037
TaaI ACNGT 9 cut(s) 38, 461, 467, 674, 1148, 1217, 1798, 1822, 1887
TaqI TCGA 7 cut(s) 684, 1007, 1043, 1127, 1258, 1365, 1863
TasI AATT 6 cut(s) 504, 565, 729, 738, 1197, 1581
TatI WGTACW 1 cut(s) 431
TauI GCSGC 1 cut(s) 1276
TfiI GAWTC 1 cut(s) 874
Tru1I TTAA 7 cut(s) 564, 573, 732, 741, 1407, 2085, 2199
Tru9I TTAA 7 cut(s) 564, 573, 732, 741, 1407, 2085, 2199
TscAI CASTG 8 cut(s) 183, 677, 1153, 1395, 1446, 1723, 1998, 2175
TseFI GTSAC 4 cut(s) 38, 512, 1282, 1792
Tsp45I GTSAC 4 cut(s) 38, 512, 1282, 1792
TspDTI ATGAA 8 cut(s) 89, 591, 1118, 1149, 1155, 1169, 1194, 1691
TspGWI ACGGA 3 cut(s) 1061, 1754, 1762
TspRI CASTG 8 cut(s) 183, 677, 1153, 1395, 1446, 1723, 1998, 2175
Tth111I GACNNNGTC 1 cut(s) 1724
Van91I CCANNNNNTGG 1 cut(s) 604
VpaK11BI GGWCC 2 cut(s) 34, 2190
VspI ATTAAT 1 cut(s) 732
XagI CCTNNNNNAGG 2 cut(s) 888, 954
XapI RAATTY 1 cut(s) 1197
XcmI CCANNNNNNNNNTGG 2 cut(s) 28, 235
XmiI GTMKAC 2 cut(s) 1043, 1889
XspI CTAG 4 cut(s) 212, 560, 800, 1376
Zsp2I ATGCAT 2 cut(s) 317, 1608
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.