pycom03g20530

ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
21045942 .. 21046762
821 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g20530.1

Sequence Viewer

Length: 723 bp
ATGTACCCAATAATAGCTGCGGATGAGGAGATCAAGAATATGGACACAGAGAAGATCAAGAGATACTTGTCCAAAATTGCCATGCGGAGCCAGTGGGAAGAAGTTGTTAGAATCTATAGGCTCAACAAGAAGGCTCACGGGGCAAAAATCACCAAGTCAGGTGACACAGCACTACACGTAGCAGTGTCTGACGGCCAAGAAAAATATGTTAAAGAGCTAGTAAAGGTGATTACTGGAAAGGAGCTTGAAATTCAAAACGAGCGAGGGAATACCCCTCTCCACATCGCGGCACGGATGGGAAACGAGACAATGTGTTCGTGCCTTGCCAACGCTCATCCATCCTTGGTCACTACTTTTAATGTAGACAATGAGACTCCTCTATTCTTGGCTGCTGTCTATGGTAAAAAAGATGCCTTCTTATGCATGCACTACATTTATAACCCTACCCCTGGTGAGGTTACTCGGACACGCTACAATTATTGTCGGAGGAATAACGGTGATACCATGTTGCATGTTGCAATTGCTAGGGAATACTTTGATTTGGCATTTCAGATAATTCACTTGTATAAAGATCTTGTGAATTTTGTCAATGCGCAAGGCTTTTCCCCTCTCCATCTTCTGGCTACCAAGCCTTCTGCCTTCAAAAGCGGGAGCCACCTCAGCCGATTCCAAGAAATTATTTACCACTGTGAGTACTATACAGAATATTATCGGCAAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0000166 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006888 GO:0006900 GO:0006901 GO:0006903 GO:0006915 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0006996 GO:0007154 GO:0007165 GO:0007166 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0008625 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010469 GO:0010506 GO:0010508 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010646 GO:0010648 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012501 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017075 GO:0017076 GO:0017148 GO:0019222 GO:0019538 GO:0019905 GO:0022607 GO:0022898 GO:0023051 GO:0023052 GO:0023057 GO:0030162 GO:0030554 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032270 GO:0032409 GO:0032412 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033194 GO:0033554 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034599 GO:0034762 GO:0034765 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0042221 GO:0042802 GO:0042981 GO:0043065 GO:0043066 GO:0043067 GO:0043068 GO:0043069 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043269 GO:0043280 GO:0043281 GO:0043412 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045862 GO:0046777 GO:0046907 GO:0048193 GO:0048194 GO:0048199 GO:0048207 GO:0048208 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051248 GO:0051336 GO:0051345 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0060548 GO:0061024 GO:0065003 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071447 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090114 GO:0097159 GO:0097190 GO:0097191 GO:0097367 GO:0099601 GO:0140096 GO:1900449 GO:1901265 GO:1901363 GO:1901564 GO:1901700 GO:1901701 GO:1902041 GO:1902042 GO:1904062 GO:2000112 GO:2000113 GO:2000116 GO:2000310 GO:2001056 GO:2001233 GO:2001234 GO:2001236 GO:2001237 GO:2001257
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

241

Amino Acids

27.64

Weight (kDa)

8.46

Isoelectric Point (pI)

30.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_4 PF13637 58 - 108 5.4e-08 Ankyrin repeats (many copies)
Ank_2 PF12796 72 - 138 3.4e-09 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 438
Acc16I TGCGCA 1 cut(s) 594
AccB7I CCANNNNNTGG 1 cut(s) 619
AccI GTMKAC 1 cut(s) 363
AccII CGCG 1 cut(s) 287
AciI CCGC 4 cut(s) 20, 85, 287, 648
AcoI YGGCCR 1 cut(s) 193
AcsI RAATTY 2 cut(s) 249, 580
AfaI GTAC 2 cut(s) 5, 695
AfiI CCNNNNNNNGG 4 cut(s) 286, 449, 454, 619
AflIII ACRYGT 1 cut(s) 175
AgsI TTSAA 3 cut(s) 248, 254, 643
AjnI CCWGG 1 cut(s) 448
AluBI AGCT 3 cut(s) 17, 217, 244
AluI AGCT 3 cut(s) 17, 217, 244
Alw26I GTCTC 2 cut(s) 299, 365
AlwNI CAGNNNCTG 1 cut(s) 188
AoxI GGCC 1 cut(s) 193
ApeKI GCWGC 2 cut(s) 17, 389
ApoI RAATTY 2 cut(s) 249, 580
ArsI GACNNNNNNTTYG 2 cut(s) 298, 330
AspLEI GCGC 1 cut(s) 595
AsuHPI GGTGA 5 cut(s) 142, 173, 238, 464, 509
BbvCI CCTCAGC 1 cut(s) 659
BbvI GCAGC 2 cut(s) 4, 376
BccI CCATC 3 cut(s) 289, 346, 621
BceAI ACGGC 1 cut(s) 208
BciT130I CCWGG 1 cut(s) 450
BcoDI GTCTC 2 cut(s) 299, 365
BfaI CTAG 2 cut(s) 218, 525
BfmI CTRYAG 1 cut(s) 115
BglII AGATCT 1 cut(s) 571
BisI GCNGC 3 cut(s) 18, 288, 390
BlsI GCNGC 3 cut(s) 19, 289, 391
BmcAI AGTACT 1 cut(s) 695
Bme1390I CCNGG 1 cut(s) 450
BmiI GGNNCC 2 cut(s) 89, 653
BmrFI CCNGG 1 cut(s) 450
BmsI GCATC 1 cut(s) 400
Bpu10I CCTNAGC 1 cut(s) 659
BsaAI YACGTR 1 cut(s) 178
BsaJI CCNNGG 2 cut(s) 342, 448
Bsc4I CCNNNNNNNGG 4 cut(s) 286, 449, 454, 619
Bse1I ACTGG 2 cut(s) 91, 238
BseBI CCWGG 1 cut(s) 450
BseDI CCNNGG 2 cut(s) 342, 448
BseGI GGATG 4 cut(s) 28, 300, 334, 338
BseLI CCNNNNNNNGG 4 cut(s) 286, 449, 454, 619
BseMII CTCAG 1 cut(s) 673
BseNI ACTGG 2 cut(s) 91, 238
BseRI GAGGAG 2 cut(s) 41, 366
BseXI GCAGC 2 cut(s) 4, 376
Bsh1236I CGCG 1 cut(s) 287
BshFI GGCC 1 cut(s) 195
BslI CCNNNNNNNGG 4 cut(s) 286, 449, 454, 619
BsmAI GTCTC 2 cut(s) 299, 365
BsnI GGCC 1 cut(s) 195
Bsp143I GATC 3 cut(s) 30, 54, 571
BspACI CCGC 4 cut(s) 20, 85, 287, 648
BspANI GGCC 1 cut(s) 195
BspCNI CTCAG 1 cut(s) 672
BspFNI CGCG 1 cut(s) 287
BspLI GGNNCC 2 cut(s) 89, 653
BsrI ACTGG 2 cut(s) 91, 238
BssECI CCNNGG 2 cut(s) 342, 448
BssMI GATC 3 cut(s) 30, 54, 571
BssT1I CCWWGG 1 cut(s) 342
Bst2UI CCWGG 1 cut(s) 450
Bst4CI ACNGT 2 cut(s) 497, 689
BstBAI YACGTR 1 cut(s) 178
BstC8I GCNNGC 1 cut(s) 425
BstDEI CTNAG 1 cut(s) 659
BstF5I GGATG 4 cut(s) 28, 300, 334, 338
BstFNI CGCG 1 cut(s) 287
BstHHI GCGC 1 cut(s) 595
BstKTI GATC 3 cut(s) 33, 57, 574
BstMAI GTCTC 2 cut(s) 299, 365
BstMBI GATC 3 cut(s) 30, 54, 571
BstMWI GCNNNNNNNGC 2 cut(s) 140, 660
BstNI CCWGG 1 cut(s) 450
BstNSI RCATGY 2 cut(s) 427, 515
BstSCI CCNGG 1 cut(s) 448
BstSFI CTRYAG 1 cut(s) 115
BstUI CGCG 1 cut(s) 287
BstV1I GCAGC 2 cut(s) 4, 376
BstX2I RGATCY 1 cut(s) 571
BstYI RGATCY 1 cut(s) 571
BsuRI GGCC 1 cut(s) 195
BtgZI GCGATG 1 cut(s) 268
BtsCI GGATG 4 cut(s) 28, 300, 334, 338
BtsI GCAGTG 1 cut(s) 189
BtsIMutI CAGTG 3 cut(s) 98, 189, 685
Cac8I GCNNGC 1 cut(s) 425
CaiI CAGNNNCTG 1 cut(s) 188
CfoI GCGC 1 cut(s) 595
Csp6I GTAC 2 cut(s) 4, 694
CviAII CATG 4 cut(s) 82, 424, 505, 512
CviQI GTAC 2 cut(s) 4, 694
DdeI CTNAG 1 cut(s) 659
DpnI GATC 3 cut(s) 32, 56, 573
DpnII GATC 3 cut(s) 30, 54, 571
EaeI YGGCCR 1 cut(s) 193
Eco130I CCWWGG 1 cut(s) 342
EcoRII CCWGG 1 cut(s) 448
EcoT14I CCWWGG 1 cut(s) 342
EcoT22I ATGCAT 1 cut(s) 425
ErhI CCWWGG 1 cut(s) 342
FaeI CATG 4 cut(s) 85, 427, 508, 515
FalI AAGNNNNNCTT 2 cut(s) 50, 82
FatI CATG 4 cut(s) 81, 423, 504, 511
FauI CCCGC 1 cut(s) 641
FblI GTMKAC 1 cut(s) 363
Fnu4HI GCNGC 3 cut(s) 18, 288, 390
FokI GGATG 4 cut(s) 35, 307, 321, 325
Fsp4HI GCNGC 3 cut(s) 18, 288, 390
FspBI CTAG 2 cut(s) 218, 525
FspI TGCGCA 1 cut(s) 594
GlaI GCGC 1 cut(s) 594
GluI GCNGC 3 cut(s) 18, 288, 390
HaeIII GGCC 1 cut(s) 195
HhaI GCGC 1 cut(s) 595
Hin1II CATG 4 cut(s) 85, 427, 508, 515
Hin6I GCGC 1 cut(s) 593
HinP1I GCGC 1 cut(s) 593
HinfI GANTC 3 cut(s) 111, 373, 666
HphI GGTGA 5 cut(s) 142, 173, 238, 464, 509
Hpy166II GTNNAC 1 cut(s) 364
Hpy188I TCNGA 4 cut(s) 190, 465, 486, 552
Hpy188III TCNNGA 2 cut(s) 34, 58
Hpy8I GTNNAC 1 cut(s) 364
HpyAV CCTTC 4 cut(s) 124, 424, 642, 649
HpyCH4III ACNGT 2 cut(s) 497, 689
HpyCH4IV ACGT 1 cut(s) 177
HpyCH4V TGCA 4 cut(s) 423, 427, 511, 518
HpyF10VI GCNNNNNNNGC 2 cut(s) 140, 660
HpyF3I CTNAG 1 cut(s) 659
HpySE526I ACGT 1 cut(s) 177
Hsp92II CATG 4 cut(s) 85, 427, 508, 515
HspAI GCGC 1 cut(s) 593
Kzo9I GATC 3 cut(s) 30, 54, 571
LmnI GCTCC 3 cut(s) 87, 241, 651
LpnPI CCDG 6 cut(s) 104, 144, 219, 435, 462, 605
Lsp1109I GCAGC 2 cut(s) 4, 376
LweI GCATC 1 cut(s) 400
MaeI CTAG 2 cut(s) 218, 525
MaeII ACGT 1 cut(s) 177
MaeIII GTNAC 3 cut(s) 161, 346, 457
MalI GATC 3 cut(s) 32, 56, 573
MboI GATC 3 cut(s) 30, 54, 571
MboII GAAGA 3 cut(s) 64, 110, 608
MfeI CAATTG 1 cut(s) 519
MflI RGATCY 1 cut(s) 571
MluCI AATT 7 cut(s) 75, 249, 475, 519, 555, 580, 675
MlyI GAGTC 1 cut(s) 367
MmeI TCCRAC 1 cut(s) 464
MnlI CCTC 8 cut(s) 19, 257, 285, 387, 448, 480, 618, 668
Mph1103I ATGCAT 1 cut(s) 425
MseI TTAA 2 cut(s) 210, 357
MspR9I CCNGG 1 cut(s) 450
MunI CAATTG 1 cut(s) 519
MvaI CCWGG 1 cut(s) 450
MvnI CGCG 1 cut(s) 287
MwoI GCNNNNNNNGC 2 cut(s) 140, 660
NdeII GATC 3 cut(s) 30, 54, 571
NlaIII CATG 4 cut(s) 85, 427, 508, 515
NlaIV GGNNCC 2 cut(s) 89, 653
NmuCI GTSAC 2 cut(s) 161, 346
NsbI TGCGCA 1 cut(s) 594
NsiI ATGCAT 1 cut(s) 425
NspI RCATGY 2 cut(s) 427, 515
PaeI GCATGC 1 cut(s) 427
PfeI GAWTC 2 cut(s) 111, 666
PflMI CCANNNNNTGG 1 cut(s) 619
PkrI GCNGC 3 cut(s) 19, 289, 391
PleI GAGTC 1 cut(s) 367
PpsI GAGTC 1 cut(s) 367
Ppu21I YACGTR 1 cut(s) 178
PsiI TTATAA 1 cut(s) 438
Psp6I CCWGG 1 cut(s) 448
PspGI CCWGG 1 cut(s) 448
PspN4I GGNNCC 2 cut(s) 89, 653
PstNI CAGNNNCTG 1 cut(s) 188
PsuI RGATCY 1 cut(s) 571
RsaI GTAC 2 cut(s) 5, 695
RsaNI GTAC 2 cut(s) 4, 694
SaqAI TTAA 2 cut(s) 210, 357
SatI GCNGC 3 cut(s) 18, 288, 390
Sau3AI GATC 3 cut(s) 30, 54, 571
ScaI AGTACT 1 cut(s) 695
SchI GAGTC 1 cut(s) 367
ScrFI CCNGG 1 cut(s) 450
SetI ASST 8 cut(s) 19, 163, 180, 219, 228, 246, 459, 660
SfaNI GCATC 1 cut(s) 400
SfcI CTRYAG 1 cut(s) 115
SphI GCATGC 1 cut(s) 427
Sse9I AATT 7 cut(s) 75, 249, 475, 519, 555, 580, 675
SsiI CCGC 4 cut(s) 20, 85, 287, 648
SspI AATATT 1 cut(s) 707
SspMI CTAG 2 cut(s) 218, 525
StyD4I CCNGG 1 cut(s) 448
StyI CCWWGG 1 cut(s) 342
TaaI ACNGT 2 cut(s) 497, 689
TaiI ACGT 1 cut(s) 180
TasI AATT 7 cut(s) 75, 249, 475, 519, 555, 580, 675
TatI WGTACW 1 cut(s) 693
TauI GCSGC 1 cut(s) 290
TfiI GAWTC 2 cut(s) 111, 666
Tru1I TTAA 2 cut(s) 210, 357
Tru9I TTAA 2 cut(s) 210, 357
TscAI CASTG 3 cut(s) 98, 189, 692
TseFI GTSAC 2 cut(s) 161, 346
TseI GCWGC 2 cut(s) 17, 389
Tsp45I GTSAC 2 cut(s) 161, 346
TspGWI ACGGA 1 cut(s) 307
TspRI CASTG 3 cut(s) 98, 189, 692
Van91I CCANNNNNTGG 1 cut(s) 619
XapI RAATTY 2 cut(s) 249, 580
XceI RCATGY 2 cut(s) 427, 515
XmiI GTMKAC 1 cut(s) 363
XspI CTAG 2 cut(s) 218, 525
ZrmI AGTACT 1 cut(s) 695
Zsp2I ATGCAT 1 cut(s) 425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.