Rh6DG319000

ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Reverse (-)
52145547 .. 52146579
1033 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG319000.1

Sequence Viewer

Length: 807 bp
ATGTCTTCTGCCAGAAATACCATGACCGGCATGGACAGTGAGAGCATCAAGAAAAAGTTGTTCCAGACAGCCATGAAAAGCCAATGGGAAGAAATTGTCCGAGAATATAGGCAAAACAAGCAGGCTCACAAGGCAAGGATCACCAAGTCAGCTGACACGGCATTGCACATAGCAGTGTTAGATGGCCAAGAGGAATGTGTTGAAGAACTAGTAAACCTGGTTTCCATAGAGGAGCTGAAACTCCAAAACGAGCGAGGGAATACCCCTCTCCATTTCGCTGCAGCACAGGGGAATGTGAGAATGTGCAACTGCATTGCCAAAGGTCGTCCTTCTTTGGTTGGTATTCTCAACAAAGATAAAGAGACGCCTCTCTTCTTGGCTGCTCTCCATGGTAAAAAAGATGCCTTCTTGTGTCTCCACTACATTTGTACTCCTGACAAGTCTTCTCCAAACTACAATTACTGTCGGAGGGAAGATGGAGAGACTATCTTGCATTGTGCTATTGATGGGGACTACTTTGATTTGGCATTTCAGATAATAGCTCTGTATAAAGATCTAGTTAATTATGTTAATGAAGCTGGGTTTTCCCCTCTCCATCTTCTGGCGAGTAAGCCTTCCGCTTTCAAAAGTGGTAGCCACCTTAGACCTTGGAGCATAATCATTTACCACTGTATATTGGTCGATGAGCTGAAGGTGGAAGAAGAACGTCACTTCCGTCAGCGGGCTCCAAAATACCCAGAAAACTACAAAACCTGCATCAACTTCTTGCTAGTGATCTGGAAGATGGCTCAAGCATTAGGTATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0000166 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006888 GO:0006900 GO:0006901 GO:0006903 GO:0006915 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0006996 GO:0007154 GO:0007165 GO:0007166 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0008625 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010469 GO:0010506 GO:0010508 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010646 GO:0010648 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012501 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017075 GO:0017076 GO:0017148 GO:0019222 GO:0019538 GO:0019905 GO:0022607 GO:0022898 GO:0023051 GO:0023052 GO:0023057 GO:0030162 GO:0030554 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032270 GO:0032409 GO:0032412 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033194 GO:0033554 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034599 GO:0034762 GO:0034765 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0042221 GO:0042802 GO:0042981 GO:0043065 GO:0043066 GO:0043067 GO:0043068 GO:0043069 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043269 GO:0043280 GO:0043281 GO:0043412 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045862 GO:0046777 GO:0046907 GO:0048193 GO:0048194 GO:0048199 GO:0048207 GO:0048208 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051248 GO:0051336 GO:0051345 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0060548 GO:0061024 GO:0065003 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071447 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090114 GO:0097159 GO:0097190 GO:0097191 GO:0097367 GO:0099601 GO:0140096 GO:1900449 GO:1901265 GO:1901363 GO:1901564 GO:1901700 GO:1901701 GO:1902041 GO:1902042 GO:1904062 GO:2000112 GO:2000113 GO:2000116 GO:2000310 GO:2001056 GO:2001233 GO:2001234 GO:2001236 GO:2001237 GO:2001257
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

268

Amino Acids

30.55

Weight (kDa)

8.02

Isoelectric Point (pI)

44.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 31 - 106 1.1e-09 Ankyrin repeats (3 copies)
Ank_4 PF13637 55 - 102 2.9e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 77 - 137 6.6e-07 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 761
AccB7I CCANNNNNTGG 1 cut(s) 601
AciI CCGC 2 cut(s) 618, 721
AclWI GGATC 1 cut(s) 146
AcoI YGGCCR 1 cut(s) 184
AcuI CTGAAG 1 cut(s) 710
AcyI GRCGYC 1 cut(s) 365
AfaI GTAC 1 cut(s) 430
AfiI CCNNNNNNNGG 2 cut(s) 601, 721
AgsI TTSAA 2 cut(s) 203, 625
AhlI ACTAGT 1 cut(s) 208
AjnI CCWGG 1 cut(s) 216
AloI GAACNNNNNNTCC 2 cut(s) 696, 728
AluBI AGCT 5 cut(s) 152, 235, 542, 578, 688
AluI AGCT 5 cut(s) 152, 235, 542, 578, 688
Alw26I GTCTC 3 cut(s) 356, 419, 476
AlwI GGATC 1 cut(s) 146
AoxI GGCC 1 cut(s) 184
ApeKI GCWGC 3 cut(s) 278, 281, 380
AsuHPI GGTGA 1 cut(s) 133
BalI TGGCCA 1 cut(s) 186
BanII GRGCYC 1 cut(s) 727
BbsI GAAGAC 1 cut(s) 435
BbvI GCAGC 3 cut(s) 265, 293, 367
BccI CCATC 5 cut(s) 176, 470, 500, 603, 778
BceAI ACGGC 1 cut(s) 174
BciT130I CCWGG 1 cut(s) 218
BcoDI GTCTC 3 cut(s) 356, 419, 476
BcuI ACTAGT 1 cut(s) 208
BfaI CTAG 3 cut(s) 209, 557, 770
BfmI CTRYAG 1 cut(s) 279
BfuAI ACCTGC 1 cut(s) 761
BglII AGATCT 1 cut(s) 553
BisI GCNGC 3 cut(s) 279, 282, 381
BlsI GCNGC 3 cut(s) 280, 283, 382
Bme1390I CCNGG 1 cut(s) 218
BmiI GGNNCC 1 cut(s) 726
BmrFI CCNGG 1 cut(s) 218
BmsI GCATC 3 cut(s) 54, 391, 765
BpiI GAAGAC 1 cut(s) 435
BpuEI CTTGAG 1 cut(s) 774
BsaHI GRCGYC 1 cut(s) 365
BsaJI CCNNGG 2 cut(s) 388, 647
Bsc4I CCNNNNNNNGG 2 cut(s) 601, 721
Bse118I RCCGGY 1 cut(s) 26
Bse3DI GCAATG 2 cut(s) 161, 312
BseBI CCWGG 1 cut(s) 218
BseDI CCNNGG 2 cut(s) 388, 647
BseLI CCNNNNNNNGG 2 cut(s) 601, 721
BseMI GCAATG 2 cut(s) 161, 312
BseRI GAGGAG 1 cut(s) 245
BseXI GCAGC 3 cut(s) 265, 293, 367
BseYI CCCAGC 1 cut(s) 578
BshFI GGCC 1 cut(s) 186
BsiSI CCGG 1 cut(s) 27
BslFI GGGAC 1 cut(s) 524
BslI CCNNNNNNNGG 2 cut(s) 601, 721
BsmAI GTCTC 3 cut(s) 356, 419, 476
BsmBI CGTCTC 1 cut(s) 356
BsmFI GGGAC 1 cut(s) 524
BsnI GGCC 1 cut(s) 186
Bsp1286I GDGCHC 1 cut(s) 727
Bsp143I GATC 3 cut(s) 138, 553, 774
Bsp19I CCATGG 1 cut(s) 388
BspACI CCGC 2 cut(s) 618, 721
BspANI GGCC 1 cut(s) 186
BspLI GGNNCC 1 cut(s) 726
BspMAI CTGCAG 1 cut(s) 283
BspMI ACCTGC 1 cut(s) 761
BspPI GGATC 1 cut(s) 146
BsrDI GCAATG 2 cut(s) 161, 312
BsrFI RCCGGY 1 cut(s) 26
BssAI RCCGGY 1 cut(s) 26
BssECI CCNNGG 2 cut(s) 388, 647
BssMI GATC 3 cut(s) 138, 553, 774
BssNI GRCGYC 1 cut(s) 365
BssT1I CCWWGG 2 cut(s) 388, 647
Bst2UI CCWGG 1 cut(s) 218
Bst4CI ACNGT 3 cut(s) 38, 464, 671
Bst6I CTCTTC 1 cut(s) 377
BstACI GRCGYC 1 cut(s) 365
BstC8I GCNNGC 2 cut(s) 123, 723
BstDEI CTNAG 1 cut(s) 641
BstDSI CCRYGG 1 cut(s) 388
BstKTI GATC 3 cut(s) 141, 556, 777
BstMAI GTCTC 3 cut(s) 356, 419, 476
BstMBI GATC 3 cut(s) 138, 553, 774
BstMWI GCNNNNNNNGC 3 cut(s) 118, 131, 158
BstNI CCWGG 1 cut(s) 218
BstSCI CCNGG 1 cut(s) 216
BstSFI CTRYAG 1 cut(s) 279
BstV1I GCAGC 3 cut(s) 265, 293, 367
BstV2I GAAGAC 1 cut(s) 435
BstX2I RGATCY 1 cut(s) 553
BstYI RGATCY 1 cut(s) 553
BsuRI GGCC 1 cut(s) 186
BtgI CCRYGG 1 cut(s) 388
BtsI GCAGTG 1 cut(s) 180
BtsIMutI CAGTG 3 cut(s) 43, 180, 667
BveI ACCTGC 1 cut(s) 761
Cac8I GCNNGC 2 cut(s) 123, 723
Cfr10I RCCGGY 1 cut(s) 26
CseI GACGC 1 cut(s) 373
CsiI ACCWGGT 1 cut(s) 216
Csp6I GTAC 1 cut(s) 429
CspCI CAANNNNNGTGG 2 cut(s) 407, 442
CviAII CATG 4 cut(s) 22, 31, 73, 389
CviQI GTAC 1 cut(s) 429
DdeI CTNAG 1 cut(s) 641
DpnI GATC 3 cut(s) 140, 555, 776
DpnII GATC 3 cut(s) 138, 553, 774
EaeI YGGCCR 1 cut(s) 184
Eam1104I CTCTTC 1 cut(s) 377
EarI CTCTTC 1 cut(s) 377
Eco130I CCWWGG 2 cut(s) 388, 647
Eco24I GRGCYC 1 cut(s) 727
Eco57I CTGAAG 1 cut(s) 710
EcoRII CCWGG 1 cut(s) 216
EcoT14I CCWWGG 2 cut(s) 388, 647
EcoT38I GRGCYC 1 cut(s) 727
ErhI CCWWGG 2 cut(s) 388, 647
Esp3I CGTCTC 1 cut(s) 356
FaeI CATG 4 cut(s) 25, 34, 76, 392
FaqI GGGAC 1 cut(s) 524
FatI CATG 4 cut(s) 21, 30, 72, 388
FauI CCCGC 1 cut(s) 714
Fnu4HI GCNGC 3 cut(s) 279, 282, 381
FriOI GRGCYC 1 cut(s) 727
Fsp4HI GCNGC 3 cut(s) 279, 282, 381
FspBI CTAG 3 cut(s) 209, 557, 770
GluI GCNGC 3 cut(s) 279, 282, 381
GsaI CCCAGC 1 cut(s) 582
HaeIII GGCC 1 cut(s) 186
HapII CCGG 1 cut(s) 27
HgaI GACGC 1 cut(s) 373
Hin1I GRCGYC 1 cut(s) 365
Hin1II CATG 4 cut(s) 25, 34, 76, 392
HpaII CCGG 1 cut(s) 27
HphI GGTGA 1 cut(s) 133
Hpy166II GTNNAC 1 cut(s) 214
Hpy188I TCNGA 3 cut(s) 101, 468, 534
Hpy188III TCNNGA 4 cut(s) 49, 64, 434, 778
Hpy8I GTNNAC 1 cut(s) 214
HpyAV CCTTC 4 cut(s) 339, 415, 624, 685
HpyCH4III ACNGT 3 cut(s) 38, 464, 671
HpyCH4IV ACGT 1 cut(s) 706
HpyCH4V TGCA 6 cut(s) 166, 281, 306, 312, 493, 756
HpyF10VI GCNNNNNNNGC 3 cut(s) 118, 131, 158
HpyF3I CTNAG 1 cut(s) 641
HpySE526I ACGT 1 cut(s) 706
Hsp92I GRCGYC 1 cut(s) 365
Hsp92II CATG 4 cut(s) 25, 34, 76, 392
Kzo9I GATC 3 cut(s) 138, 553, 774
LmnI GCTCC 3 cut(s) 232, 651, 730
Lsp1109I GCAGC 3 cut(s) 265, 293, 367
LweI GCATC 3 cut(s) 54, 391, 765
MabI ACCWGGT 1 cut(s) 216
MaeI CTAG 3 cut(s) 209, 557, 770
MaeII ACGT 1 cut(s) 706
MaeIII GTNAC 1 cut(s) 707
MalI GATC 3 cut(s) 140, 555, 776
MboI GATC 3 cut(s) 138, 553, 774
MboII GAAGA 9 cut(s) 101, 215, 364, 435, 485, 590, 710, 713, 793
MflI RGATCY 1 cut(s) 553
MhlI GDGCHC 1 cut(s) 727
MlsI TGGCCA 1 cut(s) 186
MluCI AATT 3 cut(s) 93, 457, 562
MluNI TGGCCA 1 cut(s) 186
MmeI TCCRAC 1 cut(s) 446
MnlI CCTC 7 cut(s) 184, 223, 248, 276, 378, 462, 600
Mox20I TGGCCA 1 cut(s) 186
MscI TGGCCA 1 cut(s) 186
MseI TTAA 2 cut(s) 561, 570
MslI CAYNNNNRTG 1 cut(s) 173
Msp20I TGGCCA 1 cut(s) 186
MspA1I CMGCKG 2 cut(s) 152, 721
MspI CCGG 1 cut(s) 27
MspR9I CCNGG 1 cut(s) 218
MvaI CCWGG 1 cut(s) 218
MwoI GCNNNNNNNGC 3 cut(s) 118, 131, 158
NcoI CCATGG 1 cut(s) 388
NdeII GATC 3 cut(s) 138, 553, 774
NlaIII CATG 4 cut(s) 25, 34, 76, 392
NlaIV GGNNCC 1 cut(s) 726
NmuCI GTSAC 1 cut(s) 707
PcsI WCGNNNNNNNCGW 1 cut(s) 712
PflMI CCANNNNNTGG 1 cut(s) 601
PkrI GCNGC 3 cut(s) 280, 283, 382
Psp6I CCWGG 1 cut(s) 216
PspFI CCCAGC 1 cut(s) 578
PspGI CCWGG 1 cut(s) 216
PspN4I GGNNCC 1 cut(s) 726
PstI CTGCAG 1 cut(s) 283
PsuI RGATCY 1 cut(s) 553
PvuII CAGCTG 1 cut(s) 152
RsaI GTAC 1 cut(s) 430
RsaNI GTAC 1 cut(s) 429
RseI CAYNNNNRTG 1 cut(s) 173
SaqAI TTAA 2 cut(s) 561, 570
SatI GCNGC 3 cut(s) 279, 282, 381
Sau3AI GATC 3 cut(s) 138, 553, 774
ScrFI CCNGG 1 cut(s) 218
SduI GDGCHC 1 cut(s) 727
SexAI ACCWGGT 1 cut(s) 216
SfaNI GCATC 3 cut(s) 54, 391, 765
SfcI CTRYAG 1 cut(s) 279
SmiMI CAYNNNNRTG 1 cut(s) 173
SmlI CTYRAG 1 cut(s) 789
SmoI CTYRAG 1 cut(s) 789
SpeI ACTAGT 1 cut(s) 208
Sse9I AATT 3 cut(s) 93, 457, 562
SsiI CCGC 2 cut(s) 618, 721
SspMI CTAG 3 cut(s) 209, 557, 770
StyD4I CCNGG 1 cut(s) 216
StyI CCWWGG 2 cut(s) 388, 647
TaaI ACNGT 3 cut(s) 38, 464, 671
TaiI ACGT 1 cut(s) 709
TaqI TCGA 1 cut(s) 681
TasI AATT 3 cut(s) 93, 457, 562
TatI WGTACW 1 cut(s) 428
Tru1I TTAA 2 cut(s) 561, 570
Tru9I TTAA 2 cut(s) 561, 570
TscAI CASTG 3 cut(s) 43, 180, 674
TseFI GTSAC 1 cut(s) 707
TseI GCWGC 3 cut(s) 278, 281, 380
Tsp45I GTSAC 1 cut(s) 707
TspDTI ATGAA 2 cut(s) 89, 588
TspGWI ACGGA 1 cut(s) 704
TspRI CASTG 3 cut(s) 43, 180, 674
Van91I CCANNNNNTGG 1 cut(s) 601
XcmI CCANNNNNNNNNTGG 1 cut(s) 28
XspI CTAG 3 cut(s) 209, 557, 770
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.