Rh6DG320500

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000723
Physical Location & Seq
Reverse (-)
52374822 .. 52375565
744 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG320500.1

Sequence Viewer

Length: 552 bp
ATGTGCGAATGCATTGCCAGAGGCAAAGATATCGATCATTCTTCTTTGGTTGGTATTTTCAACAAAGATAAAGAGACGCCTCTCTTCTTGGCTGCTCTCCATGGTAAAAAAGATGCCTTCTTGTGCCTCCACTACATTTGTACTCCTAAGAATCCTGACAAGTCTCCTCCTCAGAGTTCTGACCAGTCTCCTCCTCAGAGTTCTGACAAGTCTCCTCCAAACTACAATTACTGTAGGAGGGAAGATGGAGAGACTATCTTGCATTGTGCAATTGCTGGGGACTACTTTGATTTGGCATTTCAGATAATAGCACTGTATGAAGGTCTAGTTAATTCTGTTAATGAAGTTGGGTTTTCCCCTCTCCATCTTCTGGCGAGTAAGCCTTCCGCCTTCAAAAGTGGTAGCTACCTTAGACCTTGGAGCACAATCGTTTACCACTGTATATTGGTCGATAAGCTGAAGGTGGAAAAACCAGATCACTTCCGTGAGCGGATAGTTGATACAAAAAAGGCTCCGAAATACCCAGAAAACTACAAAACCTGCATCAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0000166 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006888 GO:0006900 GO:0006901 GO:0006903 GO:0006915 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0006996 GO:0007154 GO:0007165 GO:0007166 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0008625 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010469 GO:0010506 GO:0010508 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010646 GO:0010648 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012501 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017075 GO:0017076 GO:0017148 GO:0019222 GO:0019538 GO:0019905 GO:0022607 GO:0022898 GO:0023051 GO:0023052 GO:0023057 GO:0030162 GO:0030554 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032270 GO:0032409 GO:0032412 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033194 GO:0033554 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034599 GO:0034762 GO:0034765 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0042221 GO:0042802 GO:0042981 GO:0043065 GO:0043066 GO:0043067 GO:0043068 GO:0043069 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043269 GO:0043280 GO:0043281 GO:0043412 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045862 GO:0046777 GO:0046907 GO:0048193 GO:0048194 GO:0048199 GO:0048207 GO:0048208 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051248 GO:0051336 GO:0051345 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0060548 GO:0061024 GO:0065003 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071447 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090114 GO:0097159 GO:0097190 GO:0097191 GO:0097367 GO:0099601 GO:0140096 GO:1900449 GO:1901265 GO:1901363 GO:1901564 GO:1901700 GO:1901701 GO:1902041 GO:1902042 GO:1904062 GO:2000112 GO:2000113 GO:2000116 GO:2000310 GO:2001056 GO:2001233 GO:2001234 GO:2001236 GO:2001237 GO:2001257
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

183

Amino Acids

20.62

Weight (kDa)

7.58

Isoelectric Point (pI)

43.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 548
AccB7I CCANNNNNTGG 1 cut(s) 370
AccBSI CCGCTC 1 cut(s) 490
AciI CCGC 2 cut(s) 387, 490
AcuI CTGAAG 1 cut(s) 479
AcyI GRCGYC 1 cut(s) 77
AfaI GTAC 1 cut(s) 142
AfiI CCNNNNNNNGG 1 cut(s) 370
AgsI TTSAA 2 cut(s) 61, 394
AleI CACNNNNGTG 1 cut(s) 483
AluBI AGCT 2 cut(s) 405, 457
AluI AGCT 2 cut(s) 405, 457
Alw21I GWGCWC 1 cut(s) 425
Alw26I GTCTC 5 cut(s) 68, 168, 192, 216, 245
ApeKI GCWGC 1 cut(s) 92
Bbv12I GWGCWC 1 cut(s) 425
BbvI GCAGC 1 cut(s) 79
BccI CCATC 2 cut(s) 239, 372
BcgI CGANNNNNNTGC 3 cut(s) 13, 30, 47
BcoDI GTCTC 5 cut(s) 68, 168, 192, 216, 245
BfaI CTAG 1 cut(s) 326
BfmI CTRYAG 1 cut(s) 232
BfuAI ACCTGC 1 cut(s) 548
BisI GCNGC 1 cut(s) 93
BlsI GCNGC 1 cut(s) 94
BmiI GGNNCC 1 cut(s) 513
BmsI GCATC 1 cut(s) 103
Bsa29I ATCGAT 1 cut(s) 33
BsaBI GATNNNNATC 1 cut(s) 33
BsaHI GRCGYC 1 cut(s) 77
BsaJI CCNNGG 2 cut(s) 100, 416
Bsc4I CCNNNNNNNGG 1 cut(s) 370
Bse1I ACTGG 1 cut(s) 184
Bse3DI GCAATG 1 cut(s) 12
Bse8I GATNNNNATC 1 cut(s) 33
BseCI ATCGAT 1 cut(s) 33
BseDI CCNNGG 2 cut(s) 100, 416
BseJI GATNNNNATC 1 cut(s) 33
BseLI CCNNNNNNNGG 1 cut(s) 370
BseMI GCAATG 1 cut(s) 12
BseMII CTCAG 2 cut(s) 185, 209
BseNI ACTGG 1 cut(s) 184
BseRI GAGGAG 5 cut(s) 156, 159, 180, 183, 204
BseXI GCAGC 1 cut(s) 79
BseYI CCCAGC 1 cut(s) 275
BshVI ATCGAT 1 cut(s) 33
BsiHKAI GWGCWC 1 cut(s) 425
BslFI GGGAC 1 cut(s) 293
BslI CCNNNNNNNGG 1 cut(s) 370
BsmAI GTCTC 5 cut(s) 68, 168, 192, 216, 245
BsmBI CGTCTC 1 cut(s) 68
BsmFI GGGAC 1 cut(s) 293
BsmI GAATGC 1 cut(s) 14
Bsp1286I GDGCHC 1 cut(s) 425
Bsp143I GATC 2 cut(s) 34, 475
Bsp19I CCATGG 1 cut(s) 100
BspACI CCGC 2 cut(s) 387, 490
BspCNI CTCAG 2 cut(s) 184, 208
BspDI ATCGAT 1 cut(s) 33
BspLI GGNNCC 1 cut(s) 513
BspMI ACCTGC 1 cut(s) 548
BsrBI CCGCTC 1 cut(s) 490
BsrDI GCAATG 1 cut(s) 12
BsrI ACTGG 1 cut(s) 184
BssECI CCNNGG 2 cut(s) 100, 416
BssMI GATC 2 cut(s) 34, 475
BssNI GRCGYC 1 cut(s) 77
BssT1I CCWWGG 2 cut(s) 100, 416
Bst4CI ACNGT 3 cut(s) 233, 315, 440
Bst6I CTCTTC 1 cut(s) 89
BstACI GRCGYC 1 cut(s) 77
BstDEI CTNAG 4 cut(s) 147, 171, 195, 410
BstDSI CCRYGG 1 cut(s) 100
BstKTI GATC 2 cut(s) 37, 478
BstMAI GTCTC 5 cut(s) 68, 168, 192, 216, 245
BstMBI GATC 2 cut(s) 34, 475
BstSFI CTRYAG 1 cut(s) 232
BstV1I GCAGC 1 cut(s) 79
Bsu15I ATCGAT 1 cut(s) 33
BsuTUI ATCGAT 1 cut(s) 33
BtgI CCRYGG 1 cut(s) 100
BtsIMutI CAGTG 2 cut(s) 311, 436
BveI ACCTGC 1 cut(s) 548
ClaI ATCGAT 1 cut(s) 33
CseI GACGC 1 cut(s) 85
Csp6I GTAC 1 cut(s) 141
CspCI CAANNNNNGTGG 2 cut(s) 119, 154
CviAII CATG 1 cut(s) 101
CviJI RGCY 5 cut(s) 92, 382, 405, 457, 512
CviKI_1 RGCY 5 cut(s) 92, 382, 405, 457, 512
CviQI GTAC 1 cut(s) 141
DdeI CTNAG 4 cut(s) 147, 171, 195, 410
DpnI GATC 2 cut(s) 36, 477
DpnII GATC 2 cut(s) 34, 475
Eam1104I CTCTTC 1 cut(s) 89
EarI CTCTTC 1 cut(s) 89
EciI GGCGGA 1 cut(s) 376
Eco130I CCWWGG 2 cut(s) 100, 416
Eco32I GATATC 1 cut(s) 31
Eco57I CTGAAG 1 cut(s) 479
EcoRV GATATC 1 cut(s) 31
EcoT14I CCWWGG 2 cut(s) 100, 416
EcoT22I ATGCAT 1 cut(s) 14
ErhI CCWWGG 2 cut(s) 100, 416
Esp3I CGTCTC 1 cut(s) 68
FaeI CATG 1 cut(s) 104
FaiI YATR 3 cut(s) 102, 318, 443
FaqI GGGAC 1 cut(s) 293
FatI CATG 1 cut(s) 100
Fnu4HI GCNGC 1 cut(s) 93
Fsp4HI GCNGC 1 cut(s) 93
FspBI CTAG 1 cut(s) 326
GluI GCNGC 1 cut(s) 93
GsaI CCCAGC 1 cut(s) 279
HgaI GACGC 1 cut(s) 85
Hin1I GRCGYC 1 cut(s) 77
Hin1II CATG 1 cut(s) 104
HinfI GANTC 1 cut(s) 151
Hpy166II GTNNAC 1 cut(s) 433
Hpy188I TCNGA 6 cut(s) 174, 181, 198, 205, 303, 516
Hpy188III TCNNGA 1 cut(s) 155
Hpy8I GTNNAC 1 cut(s) 433
HpyAV CCTTC 5 cut(s) 127, 314, 393, 400, 454
HpyCH4III ACNGT 3 cut(s) 233, 315, 440
HpyCH4V TGCA 4 cut(s) 12, 262, 269, 543
HpyF3I CTNAG 4 cut(s) 147, 171, 195, 410
Hsp92I GRCGYC 1 cut(s) 77
Hsp92II CATG 1 cut(s) 104
Kzo9I GATC 2 cut(s) 34, 475
LmnI GCTCC 2 cut(s) 420, 517
LpnPI CCDG 7 cut(s) 31, 168, 197, 261, 356, 486, 537
Lsp1109I GCAGC 1 cut(s) 79
LweI GCATC 1 cut(s) 103
MaeI CTAG 1 cut(s) 326
MalI GATC 2 cut(s) 36, 477
MbiI CCGCTC 1 cut(s) 490
MboI GATC 2 cut(s) 34, 475
MboII GAAGA 4 cut(s) 33, 76, 254, 359
MfeI CAATTG 1 cut(s) 270
MhlI GDGCHC 1 cut(s) 425
MluCI AATT 3 cut(s) 226, 270, 331
Mph1103I ATGCAT 1 cut(s) 14
MseI TTAA 2 cut(s) 330, 339
MslI CAYNNNNRTG 1 cut(s) 483
MunI CAATTG 1 cut(s) 270
Mva1269I GAATGC 1 cut(s) 14
NcoI CCATGG 1 cut(s) 100
NdeII GATC 2 cut(s) 34, 475
NlaIII CATG 1 cut(s) 104
NlaIV GGNNCC 1 cut(s) 513
NsiI ATGCAT 1 cut(s) 14
OliI CACNNNNGTG 1 cut(s) 483
PctI GAATGC 1 cut(s) 14
PfeI GAWTC 1 cut(s) 151
PflMI CCANNNNNTGG 1 cut(s) 370
PkrI GCNGC 1 cut(s) 94
PspFI CCCAGC 1 cut(s) 275
PspN4I GGNNCC 1 cut(s) 513
RsaI GTAC 1 cut(s) 142
RsaNI GTAC 1 cut(s) 141
RseI CAYNNNNRTG 1 cut(s) 483
SaqAI TTAA 2 cut(s) 330, 339
SatI GCNGC 1 cut(s) 93
Sau3AI GATC 2 cut(s) 34, 475
SduI GDGCHC 1 cut(s) 425
SetI ASST 7 cut(s) 325, 407, 411, 418, 459, 465, 542
SfaNI GCATC 1 cut(s) 103
SfcI CTRYAG 1 cut(s) 232
SmiMI CAYNNNNRTG 1 cut(s) 483
Sse9I AATT 3 cut(s) 226, 270, 331
SsiI CCGC 2 cut(s) 387, 490
SspMI CTAG 1 cut(s) 326
StyI CCWWGG 2 cut(s) 100, 416
TaaI ACNGT 3 cut(s) 233, 315, 440
TaqI TCGA 2 cut(s) 33, 450
TasI AATT 3 cut(s) 226, 270, 331
TatI WGTACW 1 cut(s) 140
TfiI GAWTC 1 cut(s) 151
Tru1I TTAA 2 cut(s) 330, 339
Tru9I TTAA 2 cut(s) 330, 339
TscAI CASTG 2 cut(s) 318, 443
TseI GCWGC 1 cut(s) 92
TspDTI ATGAA 2 cut(s) 333, 357
TspGWI ACGGA 1 cut(s) 473
TspRI CASTG 2 cut(s) 318, 443
Van91I CCANNNNNTGG 1 cut(s) 370
XspI CTAG 1 cut(s) 326
Zsp2I ATGCAT 1 cut(s) 14
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.