RchiOBHm_Chr6g0290091

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000723
Physical Location & Seq
Reverse (-)
53198500 .. 53203235
4736 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26025

Sequence Viewer

Length: 2403 bp
ATGTCTTCTGCCACAAAAATCATGAGCATGGACAGTGACAGCATCAAGAAATACTTGTTCAACATGGCCATGAAAAGCCAGTGGGAAGAAGTTGTCCAAGCATATAGGGAAAACAAGCTGGCTCTCAGGGCAAGGATCACCAAGTCAGGTGACACAGCATTGCACATAGCAGTGTCGGACGGCCAAGAGGAACATGTTGAGAAACTAGTAAAGCTGGTTTCCAAAAAGGAGCTGGAAATCCAAAATGAGCGAGGGAACACCCCTCTCCATTTTGCTGCAGCACAGGGGAATTTGAGAATGTGCAAATGCATTGCCAAAGATCATCCTTCTTTGGTTAGTATTCTCAACAAAGATAAAGAGACCCCTCTCTTCTTGGCTGCTCTCCATGGTAAAAAAGATGCCTTCTTGCGTCTACACTACATTTGTACTCCTGACAAGTCTCCTCCAAACTACAATTACTGTAGGAGGGAAGATGGAGAGACTATCTTGCATCGTGCAATTGATGGGGACTACTATGATTTGGCATTTCAGATAATAGCCCTGTATAAAGATCTTGTTAATTCTGTTAATGAAGTTGGGTTTTCCCCTCTCCATCTTCTGGCGAGTAAGCCTTCCGCTTTCAAAAGTGGTAGCTACCTTAGACCTTGGAGCAAAATCATTTACCACTGTATATTGGTCGATGAGCTGAAGGTGGAAGAAGCAGATCACTTCCATGCGCGGGTAAATGATACAATTAACTTTGAAAAGGCTCCGAAGTACCCAGAAAACTACAAAACCTGCATCAACTTCTTGCTAGTGTTCTGGAAGATGGCTCAAGCATTAGGAAAAAGATCCACAGATCCAGAGAACCCTGAACCTAAAGGAGGAAATCCAGGTCATTACAATGCCTGCTTTGATTATGTCAAGCTTTTATCAAAGGCAATGCTGATTGTTCTTGGACTAGGGTCTACGGAGATACGGAAGATAAGGAACAAGAAAGAAAAGCACAAATGGGCTGTTCAGATCATGGACAAGCTACTAGAAAGTGCTTCGATGTATGAATATGAAGACAGTGGTATGAACCCGCAGGCAGCAACAATATCGCCCCCCAAGGACGATGAAACAAAGCCTTACAAAATTTCCGATGGTGGCGACCATATCACCCTCGGAAGCATTGAAGAACAACCAATGACACTTAGTCCTAGTACTACTGATCAACAAAACGAAAACAAAGGAAACAGCGGAACCAACGGTCAAGAACAAAAAGGAGTCATTGGAGAAGGGTCATTGCCACCAGAAGTGACACGGAATAAAACTCCTGAGATGGAAAAGAAGGAAACACCGATATTGATTGCTGCAAAGAATGGCGTGACTGAAATAGTCGAGAAGATCCTAGACCTTTTTCCAGTGGCCATACATGACCTTAATGCACAGAAAAAGAATATAGTTTTGTTGGCTGTGTTGCCGCCAGAAGTGACACGGAATAAAACTCCAGAGATGGAAAAGAAGGAAACACCGATATTGATTGCTGCGAAGAATGGCGTCACTGAAATGGTCGAGAAGATCCTAGAGCTTTTTCCAGTGGCCATATATGACCTTAATGCACAGAAAAAGAATATAGTTCTGTTGGCTGTGGAGCACAGGCAACCCCATGTGTACCAACTCTTGCTAAAGAGAAAGATCATGAAAGAAACCGTTTTCTGCAAAGTGGATGAAGATGGCAATAGTGCATTACACCTTGCAGCAAAGTTGGGAGAATACAAGCCTTGGCTAATTCCCGGTGCTGCCTTGCAAATGCAATGGGAAATCAAGTGGTACGAGTTCGTCAAAAACTCAATGCCACTCCACTTCTTCAACCGCTACAACAAGAAAAGGCAAACGGCAAAGGAAATCTTCACCGAAACCCACACCGACATCGTTAAAGACGGCGGCAATTGGCTGGCCAACACCTCCCAATCGTGCTCCGTTGTCGCTGCCCTCATCGCCACCGTCGCCTTCGCCACCGCCTCCACAGTCCCCGGCGGCACCAAAGAGGAAAACGGCGAGCCCACCCTCGAAAACCAGCCGGCTTTCCACGTCTTCAGCATCGCCTCCCTCGTCGCCCTTTGCTTATCCGTCACGGCAATGGTGATGTTCCTGGCCATTCTGACGTCACGGTATCAGGAGTGGGACTTCGGGAAAGGGCTGCCGAGGAAGCTCGTGTTCGGCCTGACGTCGCTGTTTCTGTCCATCGCTTCGATGCTGATATCGTTTTGCGCCGGACACTTCTTCGTGCTGAAAGATGAGCTGAAATACGCGGCGTTTCCGGTTTATGCAATAACGTGTTTACCGGTGTCATTTTTCGCTATGGCGCAGTTTCCGTTGTACGTTGATCTGGTGCGGGCTGCGTTTAAGAAGGTGCCGCAGCGGAGTTGCAAGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0000166 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006888 GO:0006900 GO:0006901 GO:0006903 GO:0006915 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0006996 GO:0007154 GO:0007165 GO:0007166 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0008625 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010469 GO:0010506 GO:0010508 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010646 GO:0010648 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012501 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017075 GO:0017076 GO:0017148 GO:0019222 GO:0019538 GO:0019905 GO:0022607 GO:0022898 GO:0023051 GO:0023052 GO:0023057 GO:0030162 GO:0030554 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032270 GO:0032409 GO:0032412 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033194 GO:0033554 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034599 GO:0034762 GO:0034765 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0042221 GO:0042802 GO:0042981 GO:0043065 GO:0043066 GO:0043067 GO:0043068 GO:0043069 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043269 GO:0043280 GO:0043281 GO:0043412 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045862 GO:0046777 GO:0046907 GO:0048193 GO:0048194 GO:0048199 GO:0048207 GO:0048208 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051248 GO:0051336 GO:0051345 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0060548 GO:0061024 GO:0065003 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071447 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090114 GO:0097159 GO:0097190 GO:0097191 GO:0097367 GO:0099601 GO:0140096 GO:1900449 GO:1901265 GO:1901363 GO:1901564 GO:1901700 GO:1901701 GO:1902041 GO:1902042 GO:1904062 GO:2000112 GO:2000113 GO:2000116 GO:2000310 GO:2001056 GO:2001233 GO:2001234 GO:2001236 GO:2001237 GO:2001257
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

800

Amino Acids

89.9

Weight (kDa)

8.3

Isoelectric Point (pI)

38.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 71 - 138 7e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 501 - 580 4.5e-06 Ankyrin repeats (3 copies)
PGG PF13962 638 - 750 1.6e-27 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 2132, 2195
Acc36I ACCTGC 1 cut(s) 785
AccB1I GGYRCC 2 cut(s) 2003, 2377
AccB7I CCANNNNNTGG 1 cut(s) 598
AccI GTMKAC 2 cut(s) 412, 947
AccII CGCG 2 cut(s) 718, 2276
AclWI GGATC 5 cut(s) 143, 825, 833, 1363, 1537
AcoI YGGCCR 6 cut(s) 66, 181, 1389, 1563, 1920, 2118
AcsI RAATTY 2 cut(s) 289, 1116
AcuI CTGAAG 2 cut(s) 707, 2044
AcyI GRCGYC 3 cut(s) 1521, 2129, 2192
AfaI GTAC 6 cut(s) 427, 758, 1186, 1637, 1796, 2345
AfiI CCNNNNNNNGG 3 cut(s) 598, 718, 863
AflIII ACRYGT 2 cut(s) 193, 2300
AgeI ACCGGT 1 cut(s) 2308
AgsI TTSAA 5 cut(s) 61, 622, 743, 1157, 1834
AhdI GACNNNNNGTC 1 cut(s) 1176
AhlI ACTAGT 1 cut(s) 205
AjiI CACGTC 1 cut(s) 2056
AjnI CCWGG 2 cut(s) 871, 2115
Alw21I GWGCWC 2 cut(s) 1620, 1943
Alw26I GTCTC 3 cut(s) 353, 444, 473
AlwI GGATC 5 cut(s) 143, 825, 833, 1363, 1537
AoxI GGCC 7 cut(s) 66, 181, 1389, 1563, 1920, 2118, 2185
ApoI RAATTY 2 cut(s) 289, 1116
AsiGI ACCGGT 1 cut(s) 2308
AspLEI GCGC 3 cut(s) 718, 2237, 2332
AsuC2I CCSGG 2 cut(s) 1758, 1998
AsuHPI GGTGA 5 cut(s) 130, 161, 1132, 1867, 2119
BalI TGGCCA 5 cut(s) 68, 1391, 1565, 1922, 2120
BanI GGYRCC 2 cut(s) 2003, 2377
BanII GRGCYC 1 cut(s) 2028
BauI CACGAG 1 cut(s) 2177
BbsI GAAGAC 2 cut(s) 1053, 2050
Bbv12I GWGCWC 2 cut(s) 1620, 1943
BccI CCATC 9 cut(s) 467, 497, 600, 802, 1118, 1297, 1471, 1691, 2216
BceAI ACGGC 5 cut(s) 196, 1875, 1921, 2035, 2115
BcgI CGANNNNNNTGC 2 cut(s) 1062, 1096
BciT130I CCWGG 2 cut(s) 873, 2117
BclI TGATCA 1 cut(s) 1192
BcnI CCSGG 2 cut(s) 1758, 1998
BcoDI GTCTC 3 cut(s) 353, 444, 473
BcuI ACTAGT 1 cut(s) 205
BfaI CTAG 7 cut(s) 206, 794, 941, 1019, 1182, 1373, 1547
BfmI CTRYAG 2 cut(s) 276, 460
BfuAI ACCTGC 1 cut(s) 785
BglII AGATCT 1 cut(s) 550
BmcAI AGTACT 1 cut(s) 1186
Bme1390I CCNGG 4 cut(s) 873, 1758, 1998, 2117
BmeRI GACNNNNNGTC 1 cut(s) 1176
BmgBI CACGTC 1 cut(s) 2056
BmiI GGNNCC 4 cut(s) 750, 1225, 2005, 2379
BmrFI CCNGG 4 cut(s) 873, 1758, 1998, 2117
BmsI GCATC 6 cut(s) 51, 388, 499, 789, 2073, 2208
BoxI GACNNNNGTC 1 cut(s) 943
BpiI GAAGAC 2 cut(s) 1053, 2050
BpmI CTGGAG 1 cut(s) 1455
BpuEI CTTGAG 1 cut(s) 798
BpuMI CCSGG 2 cut(s) 1758, 1998
BsaHI GRCGYC 3 cut(s) 1521, 2129, 2192
BsaI GGTCTC 1 cut(s) 353
BsaJI CCNNGG 7 cut(s) 385, 644, 1089, 1144, 1745, 1996, 2168
BsaWI WCCGGW 2 cut(s) 2284, 2308
Bsc4I CCNNNNNNNGG 3 cut(s) 598, 718, 863
Bse118I RCCGGY 2 cut(s) 2044, 2308
Bse1I ACTGG 3 cut(s) 79, 1385, 1559
Bse3DI GCAATG 6 cut(s) 158, 309, 927, 1265, 1784, 2109
BseBI CCWGG 2 cut(s) 873, 2117
BseDI CCNNGG 7 cut(s) 385, 644, 1089, 1144, 1745, 1996, 2168
BseGI GGATG 2 cut(s) 322, 1696
BseLI CCNNNNNNNGG 3 cut(s) 598, 718, 863
BseMI GCAATG 6 cut(s) 158, 309, 927, 1265, 1784, 2109
BseMII CTCAG 2 cut(s) 139, 1290
BseNI ACTGG 3 cut(s) 79, 1385, 1559
BseRI GAGGAG 1 cut(s) 432
Bsh1236I CGCG 2 cut(s) 718, 2276
BshFI GGCC 7 cut(s) 68, 183, 1391, 1565, 1922, 2120, 2187
BshNI GGYRCC 2 cut(s) 2003, 2377
BshTI ACCGGT 1 cut(s) 2308
BsiHKAI GWGCWC 2 cut(s) 1620, 1943
BsiSI CCGG 6 cut(s) 1758, 1998, 2045, 2238, 2285, 2309
BslFI GGGAC 3 cut(s) 521, 1979, 2162
BslI CCNNNNNNNGG 3 cut(s) 598, 718, 863
BsmAI GTCTC 3 cut(s) 353, 444, 473
BsmFI GGGAC 3 cut(s) 521, 1979, 2162
BsnI GGCC 7 cut(s) 68, 183, 1391, 1565, 1922, 2120, 2187
Bso31I GGTCTC 1 cut(s) 353
Bsp1286I GDGCHC 3 cut(s) 1620, 1943, 2028
Bsp19I CCATGG 1 cut(s) 385
BspANI GGCC 7 cut(s) 68, 183, 1391, 1565, 1922, 2120, 2187
BspCNI CTCAG 2 cut(s) 138, 1291
BspFNI CGCG 2 cut(s) 718, 2276
BspHI TCATGA 2 cut(s) 21, 1662
BspLI GGNNCC 4 cut(s) 750, 1225, 2005, 2379
BspMAI CTGCAG 1 cut(s) 280
BspMI ACCTGC 1 cut(s) 785
BspPI GGATC 5 cut(s) 143, 825, 833, 1363, 1537
BspT107I GGYRCC 2 cut(s) 2003, 2377
BspTNI GGTCTC 1 cut(s) 353
BsrDI GCAATG 6 cut(s) 158, 309, 927, 1265, 1784, 2109
BsrFI RCCGGY 2 cut(s) 2044, 2308
BsrI ACTGG 3 cut(s) 79, 1385, 1559
BssAI RCCGGY 2 cut(s) 2044, 2308
BssECI CCNNGG 7 cut(s) 385, 644, 1089, 1144, 1745, 1996, 2168
BssNI GRCGYC 3 cut(s) 1521, 2129, 2192
BssSI CACGAG 1 cut(s) 2177
BssT1I CCWWGG 4 cut(s) 385, 644, 1089, 1745
Bst2BI CACGAG 1 cut(s) 2177
Bst2UI CCWGG 2 cut(s) 873, 2117
Bst4CI ACNGT 9 cut(s) 35, 461, 668, 1052, 1232, 1675, 1969, 1993, 2136
Bst6I CTCTTC 1 cut(s) 374
BstACI GRCGYC 3 cut(s) 1521, 2129, 2192
BstC8I GCNNGC 7 cut(s) 120, 889, 1068, 1920, 2024, 2046, 2361
BstDEI CTNAG 4 cut(s) 125, 638, 1175, 1299
BstDSI CCRYGG 1 cut(s) 385
BstENI CCTNNNNNAGG 1 cut(s) 861
BstF5I GGATG 2 cut(s) 322, 1696
BstFNI CGCG 2 cut(s) 718, 2276
BstHHI GCGC 3 cut(s) 718, 2237, 2332
BstMAI GTCTC 3 cut(s) 353, 444, 473
BstMWI GCNNNNNNNGC 4 cut(s) 128, 1961, 1970, 2173
BstNI CCWGG 2 cut(s) 873, 2117
BstNSI RCATGY 1 cut(s) 197
BstPAI GACNNNNGTC 1 cut(s) 943
BstSCI CCNGG 4 cut(s) 871, 1756, 1996, 2115
BstSFI CTRYAG 2 cut(s) 276, 460
BstUI CGCG 2 cut(s) 718, 2276
BstV2I GAAGAC 2 cut(s) 1053, 2050
BstX2I RGATCY 5 cut(s) 550, 830, 838, 1368, 1542
BstYI RGATCY 5 cut(s) 550, 830, 838, 1368, 1542
BsuRI GGCC 7 cut(s) 68, 183, 1391, 1565, 1922, 2120, 2187
BtgI CCRYGG 1 cut(s) 385
BtgZI GCGATG 3 cut(s) 1945, 2050, 2194
BtrI CACGTC 1 cut(s) 2056
BtsCI GGATG 2 cut(s) 322, 1696
BtsI GCAGTG 1 cut(s) 177
BtsIMutI CAGTG 8 cut(s) 40, 86, 177, 664, 1057, 1392, 1524, 1566
BveI ACCTGC 1 cut(s) 785
Cac8I GCNNGC 7 cut(s) 120, 889, 1068, 1920, 2024, 2046, 2361
CciI TCATGA 2 cut(s) 21, 1662
CfoI GCGC 3 cut(s) 718, 2237, 2332
Cfr10I RCCGGY 2 cut(s) 2044, 2308
CseI GACGC 2 cut(s) 398, 1510
Csp6I GTAC 6 cut(s) 426, 757, 1185, 1636, 1795, 2344
CspAI ACCGGT 1 cut(s) 2308
CviQI GTAC 6 cut(s) 426, 757, 1185, 1636, 1795, 2344
DdeI CTNAG 4 cut(s) 125, 638, 1175, 1299
DriI GACNNNNNGTC 1 cut(s) 1176
EaeI YGGCCR 6 cut(s) 66, 181, 1389, 1563, 1920, 2118
Eam1104I CTCTTC 1 cut(s) 374
Eam1105I GACNNNNNGTC 1 cut(s) 1176
EarI CTCTTC 1 cut(s) 374
Eco130I CCWWGG 4 cut(s) 385, 644, 1089, 1745
Eco24I GRGCYC 1 cut(s) 2028
Eco31I GGTCTC 1 cut(s) 353
Eco32I GATATC 1 cut(s) 2226
Eco57I CTGAAG 2 cut(s) 707, 2044
EcoNI CCTNNNNNAGG 1 cut(s) 861
EcoRII CCWGG 2 cut(s) 871, 2115
EcoRV GATATC 1 cut(s) 2226
EcoT14I CCWWGG 4 cut(s) 385, 644, 1089, 1745
EcoT22I ATGCAT 1 cut(s) 311
EcoT38I GRGCYC 1 cut(s) 2028
ErhI CCWWGG 4 cut(s) 385, 644, 1089, 1745
FalI AAGNNNNNCTT 4 cut(s) 38, 70, 1856, 1888
FaqI GGGAC 3 cut(s) 521, 1979, 2162
FauI CCCGC 3 cut(s) 711, 1071, 2352
FbaI TGATCA 1 cut(s) 1192
FblI GTMKAC 2 cut(s) 412, 947
FokI GGATG 2 cut(s) 309, 1703
FriOI GRGCYC 1 cut(s) 2028
FspBI CTAG 7 cut(s) 206, 794, 941, 1019, 1182, 1373, 1547
GlaI GCGC 3 cut(s) 717, 2236, 2331
GsuI CTGGAG 1 cut(s) 1455
HaeIII GGCC 7 cut(s) 68, 183, 1391, 1565, 1922, 2120, 2187
HapII CCGG 6 cut(s) 1758, 1998, 2045, 2238, 2285, 2309
HgaI GACGC 2 cut(s) 398, 1510
HhaI GCGC 3 cut(s) 718, 2237, 2332
Hin1I GRCGYC 3 cut(s) 1521, 2129, 2192
Hin6I GCGC 3 cut(s) 716, 2235, 2330
HinP1I GCGC 3 cut(s) 716, 2235, 2330
HindIII AAGCTT 1 cut(s) 905
HinfI GANTC 1 cut(s) 1248
HpaII CCGG 6 cut(s) 1758, 1998, 2045, 2238, 2285, 2309
HphI GGTGA 5 cut(s) 130, 161, 1132, 1867, 2119
Hpy166II GTNNAC 4 cut(s) 413, 948, 1636, 2306
Hpy188I TCNGA 7 cut(s) 178, 531, 753, 1002, 1123, 1148, 2127
Hpy8I GTNNAC 4 cut(s) 413, 948, 1636, 2306
Hpy99I CGWCG 3 cut(s) 1973, 2081, 2197
HpyAV CCTTC 9 cut(s) 336, 412, 621, 682, 1253, 1306, 1480, 1984, 2368
HpyCH4III ACNGT 9 cut(s) 35, 461, 668, 1052, 1232, 1675, 1969, 1993, 2136
HpyCH4IV ACGT 5 cut(s) 2055, 2129, 2192, 2300, 2346
HpyF10VI GCNNNNNNNGC 4 cut(s) 128, 1961, 1970, 2173
HpyF3I CTNAG 4 cut(s) 125, 638, 1175, 1299
HpySE526I ACGT 5 cut(s) 2055, 2129, 2192, 2300, 2346
Hsp92I GRCGYC 3 cut(s) 1521, 2129, 2192
HspAI GCGC 3 cut(s) 716, 2235, 2330
KroI GCCGGC 1 cut(s) 2044
KroNI GCCGGC 1 cut(s) 2046
Ksp22I TGATCA 1 cut(s) 1192
LmnI GCTCC 5 cut(s) 229, 648, 754, 1615, 1946
LweI GCATC 6 cut(s) 51, 388, 499, 789, 2073, 2208
MaeI CTAG 7 cut(s) 206, 794, 941, 1019, 1182, 1373, 1547
MaeII ACGT 5 cut(s) 2055, 2129, 2192, 2300, 2346
MaeIII GTNAC 8 cut(s) 35, 149, 1279, 1348, 1453, 1522, 2095, 2130
MfeI CAATTG 2 cut(s) 498, 1912
MflI RGATCY 5 cut(s) 550, 830, 838, 1368, 1542
MhlI GDGCHC 3 cut(s) 1620, 1943, 2028
MlsI TGGCCA 5 cut(s) 68, 1391, 1565, 1922, 2120
MluCI AATT 8 cut(s) 289, 454, 498, 559, 732, 1116, 1752, 1912
MluNI TGGCCA 5 cut(s) 68, 1391, 1565, 1922, 2120
MlyI GAGTC 1 cut(s) 1257
MmeI TCCRAC 1 cut(s) 156
Mox20I TGGCCA 5 cut(s) 68, 1391, 1565, 1922, 2120
Mph1103I ATGCAT 1 cut(s) 311
MroNI GCCGGC 1 cut(s) 2044
MscI TGGCCA 5 cut(s) 68, 1391, 1565, 1922, 2120
MseI TTAA 7 cut(s) 558, 567, 735, 1404, 1578, 1899, 2370
MslI CAYNNNNRTG 7 cut(s) 26, 68, 170, 711, 882, 1529, 2102
Msp20I TGGCCA 5 cut(s) 68, 1391, 1565, 1922, 2120
MspA1I CMGCKG 2 cut(s) 1221, 2386
MspI CCGG 6 cut(s) 1758, 1998, 2045, 2238, 2285, 2309
MspR9I CCNGG 4 cut(s) 873, 1758, 1998, 2117
MunI CAATTG 2 cut(s) 498, 1912
MvaI CCWGG 2 cut(s) 873, 2117
MvnI CGCG 2 cut(s) 718, 2276
MwoI GCNNNNNNNGC 4 cut(s) 128, 1961, 1970, 2173
NaeI GCCGGC 1 cut(s) 2046
NciI CCSGG 2 cut(s) 1758, 1998
NcoI CCATGG 1 cut(s) 385
NgoMIV GCCGGC 1 cut(s) 2044
NlaIV GGNNCC 4 cut(s) 750, 1225, 2005, 2379
NmeAIII GCCGAG 1 cut(s) 2193
NmuCI GTSAC 8 cut(s) 35, 149, 1279, 1348, 1453, 1522, 2095, 2130
NsiI ATGCAT 1 cut(s) 311
NspI RCATGY 1 cut(s) 197
PagI TCATGA 2 cut(s) 21, 1662
PciI ACATGT 1 cut(s) 193
PcsI WCGNNNNNNNCGW 1 cut(s) 2073
PdiI GCCGGC 1 cut(s) 2046
PflMI CCANNNNNTGG 1 cut(s) 598
PinAI ACCGGT 1 cut(s) 2308
PleI GAGTC 1 cut(s) 1256
PpsI GAGTC 1 cut(s) 1256
PscI ACATGT 1 cut(s) 193
PshAI GACNNNNGTC 1 cut(s) 943
Psp6I CCWGG 2 cut(s) 871, 2115
PspGI CCWGG 2 cut(s) 871, 2115
PspN4I GGNNCC 4 cut(s) 750, 1225, 2005, 2379
PstI CTGCAG 1 cut(s) 280
PsuI RGATCY 5 cut(s) 550, 830, 838, 1368, 1542
RsaI GTAC 6 cut(s) 427, 758, 1186, 1637, 1796, 2345
RsaNI GTAC 6 cut(s) 426, 757, 1185, 1636, 1795, 2344
RseI CAYNNNNRTG 7 cut(s) 26, 68, 170, 711, 882, 1529, 2102
SaqAI TTAA 7 cut(s) 558, 567, 735, 1404, 1578, 1899, 2370
ScaI AGTACT 1 cut(s) 1186
SchI GAGTC 1 cut(s) 1257
ScrFI CCNGG 4 cut(s) 873, 1758, 1998, 2117
SduI GDGCHC 3 cut(s) 1620, 1943, 2028
SfaNI GCATC 6 cut(s) 51, 388, 499, 789, 2073, 2208
SfcI CTRYAG 2 cut(s) 276, 460
SmiMI CAYNNNNRTG 7 cut(s) 26, 68, 170, 711, 882, 1529, 2102
SmlI CTYRAG 1 cut(s) 813
SmoI CTYRAG 1 cut(s) 813
SpeI ACTAGT 1 cut(s) 205
Sse9I AATT 8 cut(s) 289, 454, 498, 559, 732, 1116, 1752, 1912
SspMI CTAG 7 cut(s) 206, 794, 941, 1019, 1182, 1373, 1547
StyD4I CCNGG 4 cut(s) 871, 1756, 1996, 2115
StyI CCWWGG 4 cut(s) 385, 644, 1089, 1745
TaaI ACNGT 9 cut(s) 35, 461, 668, 1052, 1232, 1675, 1969, 1993, 2136
TaiI ACGT 5 cut(s) 2058, 2132, 2195, 2303, 2349
TaqI TCGA 6 cut(s) 678, 1031, 1362, 1536, 2034, 2216
TasI AATT 8 cut(s) 289, 454, 498, 559, 732, 1116, 1752, 1912
TatI WGTACW 2 cut(s) 425, 1184
TauI GCSGC 5 cut(s) 1447, 1911, 2004, 2279, 2383
Tru1I TTAA 7 cut(s) 558, 567, 735, 1404, 1578, 1899, 2370
Tru9I TTAA 7 cut(s) 558, 567, 735, 1404, 1578, 1899, 2370
TscAI CASTG 8 cut(s) 40, 86, 177, 671, 1057, 1392, 1531, 1566
TseFI GTSAC 8 cut(s) 35, 149, 1279, 1348, 1453, 1522, 2095, 2130
Tsp45I GTSAC 8 cut(s) 35, 149, 1279, 1348, 1453, 1522, 2095, 2130
TspDTI ATGAA 8 cut(s) 86, 585, 1053, 1059, 1073, 1113, 1679, 1707
TspGWI ACGGA 7 cut(s) 965, 973, 1300, 1474, 1933, 2083, 2328
TspRI CASTG 8 cut(s) 40, 86, 177, 671, 1057, 1392, 1531, 1566
Van91I CCANNNNNTGG 1 cut(s) 598
XagI CCTNNNNNAGG 1 cut(s) 861
XapI RAATTY 2 cut(s) 289, 1116
XceI RCATGY 1 cut(s) 197
XcmI CCANNNNNNNNNTGG 1 cut(s) 229
XmiI GTMKAC 2 cut(s) 412, 947
XspI CTAG 7 cut(s) 206, 794, 941, 1019, 1182, 1373, 1547
ZraI GACGTC 2 cut(s) 2130, 2193
ZrmI AGTACT 1 cut(s) 1186
Zsp2I ATGCAT 1 cut(s) 311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.