Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002334

Physical Location & Seq

Genomic Coordinates Reverse (-)

5055585 .. 5057067

Gene Structure 1483 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G071400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 846 bp

ATGGCTATTGATCTCGTCGGGTTCTCAAGGATGGACGATCGGACGGCCATGGAAGAAGCAGCCTCCGCCGGCTTGCAGAGCATGGACCACCTGATCCGCGTCCTATCGAATCAAAACCCATCCCAAACCCAAACCCAAACCCCCCTCGACTGCCGAGAAATCACCGACTTCACCGTCTCCAAGTTTAAGCAGCTCATCTCCGTCTTGAACCGGACCGGTCACGCTCGGTTCCGCCGCGGACCGGCCAATCAATCCTCCACCCCGGTCCAACCCAAGCCTCAGACAACTTCGAGTGCTTTTTCTGTCCCTAAGTCCAACAACGACGACTCTCTCACTCTATCCCCTCCAATCTCCACGACGTCGTCGTTTTTGTCCTCCATCACAATCGGAGACGGCAGCGTTTCGAACGGTAAAGCCGTCTCGTCAATTCTCGCGCCACCGGCGCCGGCTTTCTCAGCCGGGAAACCTCCTCTCTCCCAATCTCACCGGAAACGGTGCCACGATAACGACTTCGCAGCTAAAACGTCGTCGTCCGGCCGCTGCCATTGCTCTAAAAGAAGGAAGACTAAGGTTAGGAGGACGATTAGAGTGCCGGCGATTAGTTCAAAAATCGCCGATATACCTTCGGATGAATTCTCCTGGAGAAAGTATGGTCAAAAGCCGATCAAGGGCTCGCCTTACCCGAGAGGGTATTATAAGTGTAGCAGCGTGAGAGGGTGTCCAGCGAGGAAACACGTGGAGAGAGCACAAGACGACCCCACTATGCTCGTCGTTACTTACGAAGGCGAGCACCGTCACCGTCACCCTTCCATCACAGCCGGTTCTGTGGGCCTTGTTTTCCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Plant_zn_clust WRKY

Protein Analysis

282

Amino Acids

30.71

Weight (kDa)

10.02

Isoelectric Point (pI)

48.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002334)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24570 AT4G31550 AT4G31550 AT4G31550
fragaria_vesca	FvH4_2g36730 FvH4_2g36730 FvH4_4g06830 FvH4_4g06830
malus_domestica	MD08G1127200.v1.1 MD13G1239100.v1.1 MD15G1106600.v1.1 MD16G1244300.v1.1
prunus_persica	Prupe.1G071400_v2.0.a1 Prupe.1G459100_v2.0.a1
pyrus_communis	pycom13g21150 pycom15g09730 pycom16g20580
rosa_chinensis	RchiOBHm_Chr4g0398741 RchiOBHm_Chr6g0305101
rosa_laevigata	RLG00000009325 RLG00000010919
rosa_multiflora	Rmu_co8094374.1_g000001 Rmu_co8161446.1_g000001 Rmu_co8180642.1_g000001 Rmu_co8389589.1_g000001 Rmu_sc0000061.1_g000025 Rmu_sc0004729.1_g000022 Rmu_sc0011133.1_g000003
rosa_roxburghii	Rroxscaffold_5G00343690 Rroxscaffold_7G00163150
rosa_rugosa	Rorug04G0011200 Rorug06G0337300
rosa_samantha	Rh4AG089100 Rh4BG086100 Rh4CG097100 Rh4DG080700 Rh6AG449100 Rh6BG452000 Rh6CG462800 Rh6DG449500
rosa_wichuraiana	Rw4G007360 Rw6G039120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	696
AasI	GACNNNNNNGTC	1 cut(s)	173
AatII	GACGTC	1 cut(s)	362
AccB1I	GGYRCC	2 cut(s)	442, 495
AccII	CGCG	3 cut(s)	99, 237, 434
AciI	CCGC	6 cut(s)	66, 97, 232, 235, 237, 538
AclWI	GGATC	1 cut(s)	88
AcoI	YGGCCR	3 cut(s)	45, 243, 535
AcsI	RAATTY	1 cut(s)	632
AcvI	CACGTG	1 cut(s)	736
AcyI	GRCGYC	2 cut(s)	359, 443
AfiI	CCNNNNNNNGG	2 cut(s)	241, 668
AflIII	ACRYGT	1 cut(s)	733
AgeI	ACCGGT	1 cut(s)	215
AgsI	TTSAA	2 cut(s)	208, 606
AjnI	CCWGG	1 cut(s)	638
AluBI	AGCT	2 cut(s)	193, 518
AluI	AGCT	2 cut(s)	193, 518
Alw21I	GWGCWC	2 cut(s)	748, 792
Alw26I	GTCTC	3 cut(s)	181, 384, 424
AlwI	GGATC	1 cut(s)	88
Ama87I	CYCGRG	1 cut(s)	682
AoxI	GGCC	4 cut(s)	45, 243, 535, 829
ApeKI	GCWGC	6 cut(s)	59, 190, 396, 515, 540, 705
ApoI	RAATTY	1 cut(s)	632
AsiGI	ACCGGT	1 cut(s)	215
AspLEI	GCGC	2 cut(s)	436, 445
AspS9I	GGNCC	5 cut(s)	85, 213, 239, 265, 829
AsuC2I	CCSGG	2 cut(s)	263, 460
AsuHPI	GGTGA	5 cut(s)	154, 163, 476, 788, 794
AsuII	TTCGAA	1 cut(s)	404
AvaI	CYCGRG	1 cut(s)	682
AvaII	GGWCC	4 cut(s)	85, 213, 239, 265
BanI	GGYRCC	2 cut(s)	442, 495
BanII	GRGCYC	1 cut(s)	674
BbrPI	CACGTG	1 cut(s)	736
BbsI	GAAGAC	1 cut(s)	569
Bbv12I	GWGCWC	2 cut(s)	748, 792
BbvI	GCAGC	6 cut(s)	71, 202, 408, 527, 527, 717
BccI	CCATC	4 cut(s)	25, 127, 386, 818
BceAI	ACGGC	3 cut(s)	60, 401, 409
BcgI	CGANNNNNNTGC	2 cut(s)	571, 605
BciT130I	CCWGG	1 cut(s)	640
BcnI	CCSGG	2 cut(s)	263, 460
BcoDI	GTCTC	3 cut(s)	181, 384, 424
BfoI	RGCGCY	1 cut(s)	446
BisI	GCNGC	8 cut(s)	60, 191, 235, 397, 516, 538, 541, 706
BlsI	GCNGC	8 cut(s)	61, 192, 236, 398, 517, 539, 542, 707
Bme1390I	CCNGG	3 cut(s)	263, 460, 640
Bme18I	GGWCC	4 cut(s)	85, 213, 239, 265
BmeT110I	CYCGRG	1 cut(s)	682
BmgT120I	GGNCC	5 cut(s)	85, 213, 239, 265, 829
BmiI	GGNNCC	3 cut(s)	230, 444, 497
BmrFI	CCNGG	3 cut(s)	263, 460, 640
BpiI	GAAGAC	1 cut(s)	569
BpmI	CTGGAG	1 cut(s)	661
Bpu14I	TTCGAA	1 cut(s)	404
BpuEI	CTTGAG	1 cut(s)	10
BpuMI	CCSGG	2 cut(s)	263, 460
BsaAI	YACGTR	1 cut(s)	736
BsaHI	GRCGYC	2 cut(s)	359, 443
BsaJI	CCNNGG	3 cut(s)	48, 235, 261
BsaWI	WCCGGW	3 cut(s)	210, 215, 486
Bsc4I	CCNNNNNNNGG	2 cut(s)	241, 668
Bse118I	RCCGGY	7 cut(s)	68, 215, 241, 439, 445, 592, 818
Bse1I	ACTGG	1 cut(s)	841
Bse3DI	GCAATG	1 cut(s)	544
BseBI	CCWGG	1 cut(s)	640
BseDI	CCNNGG	3 cut(s)	48, 235, 261
BseGI	GGATG	3 cut(s)	36, 119, 634
BseLI	CCNNNNNNNGG	2 cut(s)	241, 668
BseMI	GCAATG	1 cut(s)	544
BseMII	CTCAG	2 cut(s)	293, 468
BseNI	ACTGG	1 cut(s)	841
BseRI	GAGGAG	1 cut(s)	459
BseX3I	CGGCCG	1 cut(s)	535
BseXI	GCAGC	6 cut(s)	71, 202, 408, 527, 527, 717
Bsh1236I	CGCG	3 cut(s)	99, 237, 434
Bsh1285I	CGRYCG	2 cut(s)	40, 538
BshFI	GGCC	4 cut(s)	47, 245, 537, 831
BshNI	GGYRCC	2 cut(s)	442, 495
BshTI	ACCGGT	1 cut(s)	215
BsiEI	CGRYCG	2 cut(s)	40, 538
BsiHKAI	GWGCWC	2 cut(s)	748, 792
BsiHKCI	CYCGRG	1 cut(s)	682
BslFI	GGGAC	1 cut(s)	290
BslI	CCNNNNNNNGG	2 cut(s)	241, 668
BsmAI	GTCTC	3 cut(s)	181, 384, 424
BsmBI	CGTCTC	3 cut(s)	181, 384, 424
BsmFI	GGGAC	1 cut(s)	290
BsnI	GGCC	4 cut(s)	47, 245, 537, 831
BsoBI	CYCGRG	1 cut(s)	682
Bsp119I	TTCGAA	1 cut(s)	404
Bsp1286I	GDGCHC	3 cut(s)	674, 748, 792
Bsp143I	GATC	4 cut(s)	10, 37, 93, 663
Bsp19I	CCATGG	1 cut(s)	48
BspACI	CCGC	6 cut(s)	66, 97, 232, 235, 237, 538
BspANI	GGCC	4 cut(s)	47, 245, 537, 831
BspCNI	CTCAG	2 cut(s)	292, 467
BspFNI	CGCG	3 cut(s)	99, 237, 434
BspLI	GGNNCC	3 cut(s)	230, 444, 497
BspPI	GGATC	1 cut(s)	88
BspT104I	TTCGAA	1 cut(s)	404
BspT107I	GGYRCC	2 cut(s)	442, 495
BsrDI	GCAATG	1 cut(s)	544
BsrFI	RCCGGY	7 cut(s)	68, 215, 241, 439, 445, 592, 818
BsrI	ACTGG	1 cut(s)	841
BssAI	RCCGGY	7 cut(s)	68, 215, 241, 439, 445, 592, 818
BssECI	CCNNGG	3 cut(s)	48, 235, 261
BssMI	GATC	4 cut(s)	10, 37, 93, 663
BssNI	GRCGYC	2 cut(s)	359, 443
BssT1I	CCWWGG	1 cut(s)	48
Bst2UI	CCWGG	1 cut(s)	640
Bst4CI	ACNGT	5 cut(s)	175, 410, 495, 794, 800
BstACI	GRCGYC	2 cut(s)	359, 443
BstBAI	YACGTR	1 cut(s)	736
BstBI	TTCGAA	1 cut(s)	404
BstC8I	GCNNGC	6 cut(s)	70, 74, 447, 594, 674, 788
BstDEI	CTNAG	4 cut(s)	279, 309, 454, 567
BstDSI	CCRYGG	2 cut(s)	48, 235
BstF5I	GGATG	3 cut(s)	36, 119, 634
BstFNI	CGCG	3 cut(s)	99, 237, 434
BstH2I	RGCGCY	1 cut(s)	446
BstHHI	GCGC	2 cut(s)	436, 445
BstKTI	GATC	4 cut(s)	13, 40, 96, 666
BstMAI	GTCTC	3 cut(s)	181, 384, 424
BstMBI	GATC	4 cut(s)	10, 37, 93, 663
BstMCI	CGRYCG	2 cut(s)	40, 538
BstMWI	GCNNNNNNNGC	6 cut(s)	65, 78, 440, 442, 455, 546
BstNI	CCWGG	1 cut(s)	640
BstSCI	CCNGG	3 cut(s)	261, 458, 638
BstUI	CGCG	3 cut(s)	99, 237, 434
BstV1I	GCAGC	6 cut(s)	71, 202, 408, 527, 527, 717
BstV2I	GAAGAC	1 cut(s)	569
BstZI	CGGCCG	1 cut(s)	535
BsuRI	GGCC	4 cut(s)	47, 245, 537, 831
BtgI	CCRYGG	2 cut(s)	48, 235
BtsCI	GGATG	3 cut(s)	36, 119, 634
Cac8I	GCNNGC	6 cut(s)	70, 74, 447, 594, 674, 788
CfoI	GCGC	2 cut(s)	436, 445
Cfr10I	RCCGGY	7 cut(s)	68, 215, 241, 439, 445, 592, 818
Cfr13I	GGNCC	5 cut(s)	85, 213, 239, 265, 829
Cfr42I	CCGCGG	1 cut(s)	238
CpoI	CGGWCCG	2 cut(s)	213, 239
CseI	GACGC	1 cut(s)	88
CspAI	ACCGGT	1 cut(s)	215
CspI	CGGWCCG	2 cut(s)	213, 239
CviAII	CATG	2 cut(s)	49, 82
DdeI	CTNAG	4 cut(s)	279, 309, 454, 567
DinI	GGCGCC	1 cut(s)	444
DpnI	GATC	4 cut(s)	12, 39, 95, 665
DpnII	GATC	4 cut(s)	10, 37, 93, 663
DrdI	GACNNNNNNGTC	1 cut(s)	173
DseDI	GACNNNNNNGTC	1 cut(s)	173
EaeI	YGGCCR	3 cut(s)	45, 243, 535
EagI	CGGCCG	1 cut(s)	535
EciI	GGCGGA	2 cut(s)	55, 221
EclXI	CGGCCG	1 cut(s)	535
Eco130I	CCWWGG	1 cut(s)	48
Eco24I	GRGCYC	1 cut(s)	674
Eco47I	GGWCC	4 cut(s)	85, 213, 239, 265
Eco52I	CGGCCG	1 cut(s)	535
Eco72I	CACGTG	1 cut(s)	736
Eco88I	CYCGRG	1 cut(s)	682
EcoRI	GAATTC	1 cut(s)	632
EcoRII	CCWGG	1 cut(s)	638
EcoT14I	CCWWGG	1 cut(s)	48
EcoT38I	GRGCYC	1 cut(s)	674
EgeI	GGCGCC	1 cut(s)	444
EheI	GGCGCC	1 cut(s)	444
ErhI	CCWWGG	1 cut(s)	48
Esp3I	CGTCTC	3 cut(s)	181, 384, 424
FaeI	CATG	2 cut(s)	52, 85
FaiI	YATR	6 cut(s)	50, 83, 620, 651, 696, 764
FaqI	GGGAC	1 cut(s)	290
FatI	CATG	2 cut(s)	48, 81
Fnu4HI	GCNGC	8 cut(s)	60, 191, 235, 397, 516, 538, 541, 706
FokI	GGATG	3 cut(s)	43, 106, 641
FriOI	GRGCYC	1 cut(s)	674
Fsp4HI	GCNGC	8 cut(s)	60, 191, 235, 397, 516, 538, 541, 706
GlaI	GCGC	2 cut(s)	435, 444
GluI	GCNGC	8 cut(s)	60, 191, 235, 397, 516, 538, 541, 706
GsuI	CTGGAG	1 cut(s)	661
HaeII	RGCGCY	1 cut(s)	446
HaeIII	GGCC	4 cut(s)	47, 245, 537, 831
HgaI	GACGC	1 cut(s)	88
HhaI	GCGC	2 cut(s)	436, 445
Hin1I	GRCGYC	2 cut(s)	359, 443
Hin1II	CATG	2 cut(s)	52, 85
Hin6I	GCGC	2 cut(s)	434, 443
HinP1I	GCGC	2 cut(s)	434, 443
HinfI	GANTC	2 cut(s)	109, 326
HphI	GGTGA	5 cut(s)	154, 163, 476, 788, 794
Hpy188I	TCNGA	4 cut(s)	42, 282, 389, 628
Hpy188III	TCNNGA	1 cut(s)	205
Hpy99I	CGWCG	8 cut(s)	20, 326, 361, 364, 367, 529, 532, 773
HpyAV	CCTTC	4 cut(s)	552, 633, 776, 816
HpyCH4III	ACNGT	5 cut(s)	175, 410, 495, 794, 800
HpyCH4IV	ACGT	3 cut(s)	359, 524, 735
HpyCH4V	TGCA	1 cut(s)	76
HpyF10VI	GCNNNNNNNGC	6 cut(s)	65, 78, 440, 442, 455, 546
HpyF3I	CTNAG	4 cut(s)	279, 309, 454, 567
HpySE526I	ACGT	3 cut(s)	359, 524, 735
Hsp92I	GRCGYC	2 cut(s)	359, 443
Hsp92II	CATG	2 cut(s)	52, 85
HspAI	GCGC	2 cut(s)	434, 443
KasI	GGCGCC	1 cut(s)	442
KroI	GCCGGC	3 cut(s)	68, 445, 592
KroNI	GCCGGC	3 cut(s)	70, 447, 594
KspI	CCGCGG	1 cut(s)	238
Kzo9I	GATC	4 cut(s)	10, 37, 93, 663
Lsp1109I	GCAGC	6 cut(s)	71, 202, 408, 527, 527, 717
MaeII	ACGT	3 cut(s)	359, 524, 735
MaeIII	GTNAC	4 cut(s)	218, 772, 794, 800
MalI	GATC	4 cut(s)	12, 39, 95, 665
MboI	GATC	4 cut(s)	10, 37, 93, 663
MboII	GAAGA	2 cut(s)	65, 574
MhlI	GDGCHC	3 cut(s)	674, 748, 792
MluCI	AATT	2 cut(s)	426, 632
Mly113I	GGCGCC	1 cut(s)	443
MlyI	GAGTC	1 cut(s)	320
MmeI	TCCRAC	2 cut(s)	292, 339
MroNI	GCCGGC	3 cut(s)	68, 445, 592
MseI	TTAA	1 cut(s)	186
MspA1I	CMGCKG	2 cut(s)	237, 540
MspR9I	CCNGG	3 cut(s)	263, 460, 640
MvaI	CCWGG	1 cut(s)	640
MvnI	CGCG	3 cut(s)	99, 237, 434
MwoI	GCNNNNNNNGC	6 cut(s)	65, 78, 440, 442, 455, 546
NaeI	GCCGGC	3 cut(s)	70, 447, 594
NarI	GGCGCC	1 cut(s)	443
NciI	CCSGG	2 cut(s)	263, 460
NcoI	CCATGG	1 cut(s)	48
NdeII	GATC	4 cut(s)	10, 37, 93, 663
NgoMIV	GCCGGC	3 cut(s)	68, 445, 592
NlaIII	CATG	2 cut(s)	52, 85
NlaIV	GGNNCC	3 cut(s)	230, 444, 497
NmeAIII	GCCGAG	1 cut(s)	179
NmuCI	GTSAC	3 cut(s)	218, 794, 800
NspV	TTCGAA	1 cut(s)	404
PcsI	WCGNNNNNNNCGW	4 cut(s)	362, 414, 680, 777
PdiI	GCCGGC	3 cut(s)	70, 447, 594
PfeI	GAWTC	1 cut(s)	109
PflFI	GACNNNGTC	1 cut(s)	361
PfoI	TCCNGGA	1 cut(s)	638
PinAI	ACCGGT	1 cut(s)	215
PkrI	GCNGC	8 cut(s)	61, 192, 236, 398, 517, 539, 542, 707
Ple19I	CGATCG	1 cut(s)	40
PleI	GAGTC	1 cut(s)	320
PluTI	GGCGCC	1 cut(s)	446
PmaCI	CACGTG	1 cut(s)	736
PmlI	CACGTG	1 cut(s)	736
PpsI	GAGTC	1 cut(s)	320
Ppu21I	YACGTR	1 cut(s)	736
PsiI	TTATAA	1 cut(s)	696
Psp6I	CCWGG	1 cut(s)	638
PspCI	CACGTG	1 cut(s)	736
PspGI	CCWGG	1 cut(s)	638
PspN4I	GGNNCC	3 cut(s)	230, 444, 497
PspPI	GGNCC	5 cut(s)	85, 213, 239, 265, 829
PsyI	GACNNNGTC	1 cut(s)	361
PvuI	CGATCG	1 cut(s)	40
Rsr2I	CGGWCCG	2 cut(s)	213, 239
RsrII	CGGWCCG	2 cut(s)	213, 239
SacII	CCGCGG	1 cut(s)	238
SaqAI	TTAA	1 cut(s)	186
SatI	GCNGC	8 cut(s)	60, 191, 235, 397, 516, 538, 541, 706
Sau3AI	GATC	4 cut(s)	10, 37, 93, 663
Sau96I	GGNCC	5 cut(s)	85, 213, 239, 265, 829
SchI	GAGTC	1 cut(s)	320
ScrFI	CCNGG	3 cut(s)	263, 460, 640
SduI	GDGCHC	3 cut(s)	674, 748, 792
SetI	ASST	9 cut(s)	93, 195, 362, 469, 520, 527, 573, 625, 738
SfoI	GGCGCC	1 cut(s)	444
Sfr303I	CCGCGG	1 cut(s)	238
SfuI	TTCGAA	1 cut(s)	404
SgrAI	CRCCGGYG	1 cut(s)	439
SgrBI	CCGCGG	1 cut(s)	238
SinI	GGWCC	4 cut(s)	85, 213, 239, 265
SmlI	CTYRAG	1 cut(s)	25
SmoI	CTYRAG	1 cut(s)	25
Sse9I	AATT	2 cut(s)	426, 632
SsiI	CCGC	6 cut(s)	66, 97, 232, 235, 237, 538
SspDI	GGCGCC	1 cut(s)	442
StyD4I	CCNGG	3 cut(s)	261, 458, 638
StyI	CCWWGG	1 cut(s)	48
TaaI	ACNGT	5 cut(s)	175, 410, 495, 794, 800
TaiI	ACGT	3 cut(s)	362, 527, 738
TaqI	TCGA	4 cut(s)	107, 147, 290, 404
TasI	AATT	2 cut(s)	426, 632
TauI	GCSGC	2 cut(s)	237, 540
TfiI	GAWTC	1 cut(s)	109
Tru1I	TTAA	1 cut(s)	186
Tru9I	TTAA	1 cut(s)	186
TseFI	GTSAC	3 cut(s)	218, 794, 800
TseI	GCWGC	6 cut(s)	59, 190, 396, 515, 540, 705
Tsp45I	GTSAC	3 cut(s)	218, 794, 800
TspDTI	ATGAA	1 cut(s)	645
TspGWI	ACGGA	1 cut(s)	190
Tth111I	GACNNNGTC	1 cut(s)	361
VpaK11BI	GGWCC	4 cut(s)	85, 213, 239, 265
XapI	RAATTY	1 cut(s)	632
ZraI	GACGTC	1 cut(s)	360

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.