WRKY transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G24570 AT4G31550 AT4G31550 AT4G31550 |
| fragaria_vesca | FvH4_2g36730 FvH4_2g36730 FvH4_4g06830 FvH4_4g06830 |
| malus_domestica | MD08G1127200.v1.1 MD13G1239100.v1.1 MD15G1106600.v1.1 MD16G1244300.v1.1 |
| prunus_persica | Prupe.1G071400_v2.0.a1 Prupe.1G459100_v2.0.a1 |
| pyrus_communis | pycom13g21150 pycom15g09730 pycom16g20580 |
| rosa_chinensis | RchiOBHm_Chr4g0398741 RchiOBHm_Chr6g0305101 |
| rosa_laevigata | RLG00000009325 RLG00000010919 |
| rosa_multiflora | Rmu_co8094374.1_g000001 Rmu_co8161446.1_g000001 Rmu_co8180642.1_g000001 Rmu_co8389589.1_g000001 Rmu_sc0000061.1_g000025 Rmu_sc0004729.1_g000022 Rmu_sc0011133.1_g000003 |
| rosa_roxburghii | Rroxscaffold_5G00343690 Rroxscaffold_7G00163150 |
| rosa_rugosa | Rorug04G0011200 Rorug06G0337300 |
| rosa_samantha | Rh4AG089100 Rh4BG086100 Rh4CG097100 Rh4DG080700 Rh6AG449100 Rh6BG452000 Rh6CG462800 Rh6DG449500 |
| rosa_wichuraiana | Rw4G007360 Rw6G039120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 4 cut(s) | 259, 556, 573, 825 |
| AccBSI | CCGCTC | 1 cut(s) | 266 |
| AccI | GTMKAC | 1 cut(s) | 66 |
| AccII | CGCG | 8 cut(s) | 63, 156, 374, 392, 407, 722, 852, 911 |
| AccIII | TCCGGA | 1 cut(s) | 856 |
| AciI | CCGC | 8 cut(s) | 61, 156, 264, 392, 516, 722, 734, 911 |
| AclWI | GGATC | 4 cut(s) | 7, 502, 634, 857 |
| AcoI | YGGCCR | 2 cut(s) | 136, 522 |
| AcuI | CTGAAG | 1 cut(s) | 403 |
| AcvI | CACGTG | 1 cut(s) | 844 |
| AcyI | GRCGYC | 2 cut(s) | 260, 557 |
| AdeI | CACNNNGTG | 1 cut(s) | 606 |
| AfaI | GTAC | 5 cut(s) | 73, 743, 758, 814, 888 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 520, 553, 666, 776 |
| AflIII | ACRYGT | 2 cut(s) | 600, 841 |
| AgsI | TTSAA | 3 cut(s) | 106, 480, 714 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 205, 601 |
| AjiI | CACGTC | 1 cut(s) | 603 |
| AjnI | CCWGG | 1 cut(s) | 746 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 909 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 386, 418 |
| AluBI | AGCT | 4 cut(s) | 230, 417, 435, 490 |
| AluI | AGCT | 4 cut(s) | 230, 417, 435, 490 |
| Alw21I | GWGCWC | 4 cut(s) | 9, 437, 585, 901 |
| Alw26I | GTCTC | 3 cut(s) | 100, 430, 459 |
| AlwI | GGATC | 4 cut(s) | 7, 502, 634, 857 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 275 |
| Ama87I | CYCGRG | 1 cut(s) | 622 |
| Aor13HI | TCCGGA | 1 cut(s) | 856 |
| AoxI | GGCC | 5 cut(s) | 57, 136, 359, 510, 522 |
| ApeKI | GCWGC | 2 cut(s) | 34, 471 |
| AspLEI | GCGC | 6 cut(s) | 262, 392, 559, 852, 854, 911 |
| AspS9I | GGNCC | 5 cut(s) | 58, 132, 158, 360, 511 |
| AsuC2I | CCSGG | 3 cut(s) | 145, 521, 830 |
| AsuHPI | GGTGA | 4 cut(s) | 73, 451, 691, 774 |
| AvaI | CYCGRG | 1 cut(s) | 622 |
| AvaII | GGWCC | 2 cut(s) | 132, 158 |
| BaeGI | GKGCMC | 1 cut(s) | 830 |
| BanI | GGYRCC | 4 cut(s) | 259, 556, 573, 825 |
| BanII | GRGCYC | 2 cut(s) | 437, 782 |
| BauI | CACGAG | 2 cut(s) | 355, 578 |
| BbrPI | CACGTG | 1 cut(s) | 844 |
| BbsI | GAAGAC | 1 cut(s) | 201 |
| Bbv12I | GWGCWC | 4 cut(s) | 9, 437, 585, 901 |
| BbvI | GCAGC | 2 cut(s) | 46, 483 |
| BceAI | ACGGC | 3 cut(s) | 484, 509, 570 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 328, 362, 679, 713 |
| BciT130I | CCWGG | 1 cut(s) | 748 |
| BcnI | CCSGG | 3 cut(s) | 145, 521, 830 |
| BcoDI | GTCTC | 3 cut(s) | 100, 430, 459 |
| BfoI | RGCGCY | 2 cut(s) | 263, 560 |
| BisI | GCNGC | 2 cut(s) | 35, 472 |
| BlsI | GCNGC | 2 cut(s) | 36, 473 |
| BmcAI | AGTACT | 1 cut(s) | 743 |
| Bme1390I | CCNGG | 4 cut(s) | 145, 521, 748, 830 |
| Bme18I | GGWCC | 2 cut(s) | 132, 158 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 205, 601 |
| BmeT110I | CYCGRG | 1 cut(s) | 622 |
| BmgBI | CACGTC | 1 cut(s) | 603 |
| BmgT120I | GGNCC | 5 cut(s) | 58, 132, 158, 360, 511 |
| BmiI | GGNNCC | 7 cut(s) | 149, 261, 513, 558, 575, 640, 827 |
| BmrFI | CCNGG | 4 cut(s) | 145, 521, 748, 830 |
| BmsI | GCATC | 1 cut(s) | 861 |
| BpiI | GAAGAC | 1 cut(s) | 201 |
| BpmI | CTGGAG | 2 cut(s) | 252, 769 |
| BpuMI | CCSGG | 3 cut(s) | 145, 521, 830 |
| BsaAI | YACGTR | 1 cut(s) | 844 |
| BsaHI | GRCGYC | 2 cut(s) | 260, 557 |
| BsaJI | CCNNGG | 3 cut(s) | 519, 552, 791 |
| BsaWI | WCCGGW | 4 cut(s) | 160, 461, 530, 856 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 80, 110, 386, 416, 575, 605, 728, 758 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 520, 553, 666, 776 |
| Bse118I | RCCGGY | 4 cut(s) | 134, 178, 700, 901 |
| Bse1I | ACTGG | 1 cut(s) | 269 |
| Bse3DI | GCAATG | 1 cut(s) | 652 |
| BseAI | TCCGGA | 1 cut(s) | 856 |
| BseBI | CCWGG | 1 cut(s) | 748 |
| BseDI | CCNNGG | 3 cut(s) | 519, 552, 791 |
| BseGI | GGATG | 1 cut(s) | 865 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 520, 553, 666, 776 |
| BseMI | GCAATG | 1 cut(s) | 652 |
| BseNI | ACTGG | 1 cut(s) | 269 |
| BsePI | GCGCGC | 1 cut(s) | 850 |
| BseRI | GAGGAG | 1 cut(s) | 113 |
| BseSI | GKGCMC | 1 cut(s) | 830 |
| BseX3I | CGGCCG | 1 cut(s) | 522 |
| BseXI | GCAGC | 2 cut(s) | 46, 483 |
| BseYI | CCCAGC | 1 cut(s) | 327 |
| BsgI | GTGCAG | 1 cut(s) | 829 |
| Bsh1236I | CGCG | 8 cut(s) | 63, 156, 374, 392, 407, 722, 852, 911 |
| Bsh1285I | CGRYCG | 3 cut(s) | 306, 525, 880 |
| BshFI | GGCC | 5 cut(s) | 59, 138, 361, 512, 524 |
| BshNI | GGYRCC | 4 cut(s) | 259, 556, 573, 825 |
| BsiEI | CGRYCG | 3 cut(s) | 306, 525, 880 |
| BsiHKAI | GWGCWC | 4 cut(s) | 9, 437, 585, 901 |
| BsiHKCI | CYCGRG | 1 cut(s) | 622 |
| BsiWI | CGTACG | 1 cut(s) | 886 |
| BslFI | GGGAC | 1 cut(s) | 275 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 520, 553, 666, 776 |
| BsmAI | GTCTC | 3 cut(s) | 100, 430, 459 |
| BsmBI | CGTCTC | 2 cut(s) | 100, 459 |
| BsmFI | GGGAC | 1 cut(s) | 275 |
| BsnI | GGCC | 5 cut(s) | 59, 138, 361, 512, 524 |
| BsoBI | CYCGRG | 1 cut(s) | 622 |
| Bsp1286I | GDGCHC | 6 cut(s) | 9, 437, 585, 782, 830, 901 |
| Bsp13I | TCCGGA | 1 cut(s) | 856 |
| Bsp68I | TCGCGA | 1 cut(s) | 407 |
| BspACI | CCGC | 8 cut(s) | 61, 156, 264, 392, 516, 722, 734, 911 |
| BspANI | GGCC | 5 cut(s) | 59, 138, 361, 512, 524 |
| BspEI | TCCGGA | 1 cut(s) | 856 |
| BspFNI | CGCG | 8 cut(s) | 63, 156, 374, 392, 407, 722, 852, 911 |
| BspLI | GGNNCC | 7 cut(s) | 149, 261, 513, 558, 575, 640, 827 |
| BspPI | GGATC | 4 cut(s) | 7, 502, 634, 857 |
| BspQI | GCTCTTC | 1 cut(s) | 380 |
| BspT107I | GGYRCC | 4 cut(s) | 259, 556, 573, 825 |
| BsrBI | CCGCTC | 1 cut(s) | 266 |
| BsrDI | GCAATG | 1 cut(s) | 652 |
| BsrFI | RCCGGY | 4 cut(s) | 134, 178, 700, 901 |
| BsrI | ACTGG | 1 cut(s) | 269 |
| BssAI | RCCGGY | 4 cut(s) | 134, 178, 700, 901 |
| BssECI | CCNNGG | 3 cut(s) | 519, 552, 791 |
| BssHII | GCGCGC | 1 cut(s) | 850 |
| BssNI | GRCGYC | 2 cut(s) | 260, 557 |
| BssSI | CACGAG | 2 cut(s) | 355, 578 |
| BssT1I | CCWWGG | 1 cut(s) | 791 |
| Bst2BI | CACGAG | 2 cut(s) | 355, 578 |
| Bst2UI | CCWGG | 1 cut(s) | 748 |
| Bst4CI | ACNGT | 6 cut(s) | 42, 71, 94, 277, 761, 817 |
| Bst6I | CTCTTC | 2 cut(s) | 380, 563 |
| BstACI | GRCGYC | 2 cut(s) | 260, 557 |
| BstBAI | YACGTR | 1 cut(s) | 844 |
| BstC8I | GCNNGC | 5 cut(s) | 61, 264, 702, 852, 907 |
| BstDEI | CTNAG | 1 cut(s) | 226 |
| BstDSI | CCRYGG | 1 cut(s) | 552 |
| BstF5I | GGATG | 1 cut(s) | 865 |
| BstFNI | CGCG | 8 cut(s) | 63, 156, 374, 392, 407, 722, 852, 911 |
| BstH2I | RGCGCY | 2 cut(s) | 263, 560 |
| BstHHI | GCGC | 6 cut(s) | 262, 392, 559, 852, 854, 911 |
| BstMAI | GTCTC | 3 cut(s) | 100, 430, 459 |
| BstMCI | CGRYCG | 3 cut(s) | 306, 525, 880 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 175 |
| BstNI | CCWGG | 1 cut(s) | 748 |
| BstNSI | RCATGY | 1 cut(s) | 909 |
| BstSCI | CCNGG | 4 cut(s) | 143, 519, 746, 828 |
| BstSLI | GKGCMC | 1 cut(s) | 830 |
| BstUI | CGCG | 8 cut(s) | 63, 156, 374, 392, 407, 722, 852, 911 |
| BstV1I | GCAGC | 2 cut(s) | 46, 483 |
| BstV2I | GAAGAC | 1 cut(s) | 201 |
| BstX2I | RGATCY | 1 cut(s) | 626 |
| BstYI | RGATCY | 1 cut(s) | 626 |
| BstZI | CGGCCG | 1 cut(s) | 522 |
| BsuRI | GGCC | 5 cut(s) | 59, 138, 361, 512, 524 |
| BtgI | CCRYGG | 1 cut(s) | 552 |
| BtgZI | GCGATG | 1 cut(s) | 884 |
| BtrI | CACGTC | 1 cut(s) | 603 |
| BtsCI | GGATG | 1 cut(s) | 865 |
| BtsIMutI | CAGTG | 2 cut(s) | 276, 427 |
| BtuMI | TCGCGA | 1 cut(s) | 407 |
| Cac8I | GCNNGC | 5 cut(s) | 61, 264, 702, 852, 907 |
| CaiI | CAGNNNCTG | 1 cut(s) | 275 |
| CfoI | GCGC | 6 cut(s) | 262, 392, 559, 852, 854, 911 |
| Cfr10I | RCCGGY | 4 cut(s) | 134, 178, 700, 901 |
| Cfr13I | GGNCC | 5 cut(s) | 58, 132, 158, 360, 511 |
| CpoI | CGGWCCG | 2 cut(s) | 132, 158 |
| CseI | GACGC | 4 cut(s) | 52, 162, 352, 363 |
| Csp6I | GTAC | 5 cut(s) | 72, 742, 757, 813, 887 |
| CspI | CGGWCCG | 2 cut(s) | 132, 158 |
| CviAII | CATG | 3 cut(s) | 340, 445, 906 |
| CviQI | GTAC | 5 cut(s) | 72, 742, 757, 813, 887 |
| DdeI | CTNAG | 1 cut(s) | 226 |
| DinI | GGCGCC | 2 cut(s) | 261, 558 |
| DraIII | CACNNNGTG | 1 cut(s) | 606 |
| DriI | GACNNNNNGTC | 2 cut(s) | 205, 601 |
| EaeI | YGGCCR | 2 cut(s) | 136, 522 |
| EagI | CGGCCG | 1 cut(s) | 522 |
| Eam1104I | CTCTTC | 2 cut(s) | 380, 563 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 205, 601 |
| EarI | CTCTTC | 2 cut(s) | 380, 563 |
| Ecl136II | GAGCTC | 1 cut(s) | 435 |
| EclXI | CGGCCG | 1 cut(s) | 522 |
| Eco130I | CCWWGG | 1 cut(s) | 791 |
| Eco24I | GRGCYC | 2 cut(s) | 437, 782 |
| Eco47I | GGWCC | 2 cut(s) | 132, 158 |
| Eco52I | CGGCCG | 1 cut(s) | 522 |
| Eco53kI | GAGCTC | 1 cut(s) | 435 |
| Eco57I | CTGAAG | 1 cut(s) | 403 |
| Eco72I | CACGTG | 1 cut(s) | 844 |
| Eco88I | CYCGRG | 1 cut(s) | 622 |
| EcoICRI | GAGCTC | 1 cut(s) | 435 |
| EcoRII | CCWGG | 1 cut(s) | 746 |
| EcoT14I | CCWWGG | 1 cut(s) | 791 |
| EcoT38I | GRGCYC | 2 cut(s) | 437, 782 |
| EgeI | GGCGCC | 2 cut(s) | 261, 558 |
| EheI | GGCGCC | 2 cut(s) | 261, 558 |
| ErhI | CCWWGG | 1 cut(s) | 791 |
| Esp3I | CGTCTC | 2 cut(s) | 100, 459 |
| FaeI | CATG | 3 cut(s) | 343, 448, 909 |
| FaiI | YATR | 3 cut(s) | 341, 446, 907 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 401, 433 |
| FaqI | GGGAC | 1 cut(s) | 275 |
| FatI | CATG | 3 cut(s) | 339, 444, 905 |
| FauI | CCCGC | 4 cut(s) | 68, 271, 523, 904 |
| FblI | GTMKAC | 1 cut(s) | 66 |
| Fnu4HI | GCNGC | 2 cut(s) | 35, 472 |
| FokI | GGATG | 1 cut(s) | 872 |
| FriOI | GRGCYC | 2 cut(s) | 437, 782 |
| Fsp4HI | GCNGC | 2 cut(s) | 35, 472 |
| GlaI | GCGC | 6 cut(s) | 261, 391, 558, 851, 853, 910 |
| GluI | GCNGC | 2 cut(s) | 35, 472 |
| GsaI | CCCAGC | 1 cut(s) | 331 |
| GsuI | CTGGAG | 2 cut(s) | 252, 769 |
| HaeII | RGCGCY | 2 cut(s) | 263, 560 |
| HaeIII | GGCC | 5 cut(s) | 59, 138, 361, 512, 524 |
| HgaI | GACGC | 4 cut(s) | 52, 162, 352, 363 |
| HhaI | GCGC | 6 cut(s) | 262, 392, 559, 852, 854, 911 |
| Hin1I | GRCGYC | 2 cut(s) | 260, 557 |
| Hin1II | CATG | 3 cut(s) | 343, 448, 909 |
| Hin6I | GCGC | 6 cut(s) | 260, 390, 557, 850, 852, 909 |
| HinP1I | GCGC | 6 cut(s) | 260, 390, 557, 850, 852, 909 |
| HincII | GTYRAC | 1 cut(s) | 67 |
| HindII | GTYRAC | 1 cut(s) | 67 |
| HinfI | GANTC | 6 cut(s) | 18, 172, 253, 298, 308, 691 |
| HphI | GGTGA | 4 cut(s) | 73, 451, 691, 774 |
| Hpy166II | GTNNAC | 2 cut(s) | 67, 184 |
| Hpy188III | TCNNGA | 5 cut(s) | 106, 355, 406, 624, 857 |
| Hpy8I | GTNNAC | 2 cut(s) | 67, 184 |
| Hpy99I | CGWCG | 9 cut(s) | 68, 156, 379, 433, 442, 454, 502, 599, 607 |
| HpyAV | CCTTC | 5 cut(s) | 103, 379, 403, 660, 885 |
| HpyCH4III | ACNGT | 6 cut(s) | 42, 71, 94, 277, 761, 817 |
| HpyCH4IV | ACGT | 4 cut(s) | 602, 843, 885, 919 |
| HpyCH4V | TGCA | 2 cut(s) | 609, 810 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 175 |
| HpyF3I | CTNAG | 1 cut(s) | 226 |
| HpySE526I | ACGT | 4 cut(s) | 602, 843, 885, 919 |
| Hsp92I | GRCGYC | 2 cut(s) | 260, 557 |
| Hsp92II | CATG | 3 cut(s) | 343, 448, 909 |
| HspAI | GCGC | 6 cut(s) | 260, 390, 557, 850, 852, 909 |
| KasI | GGCGCC | 2 cut(s) | 259, 556 |
| Kpn2I | TCCGGA | 1 cut(s) | 856 |
| KroI | GCCGGC | 1 cut(s) | 700 |
| KroNI | GCCGGC | 1 cut(s) | 702 |
| LguI | GCTCTTC | 1 cut(s) | 380 |
| LmnI | GCTCC | 7 cut(s) | 4, 271, 644, 662, 847, 859, 896 |
| Lsp1109I | GCAGC | 2 cut(s) | 46, 483 |
| LweI | GCATC | 1 cut(s) | 861 |
| MaeII | ACGT | 4 cut(s) | 602, 843, 885, 919 |
| MaeIII | GTNAC | 2 cut(s) | 271, 881 |
| MbiI | CCGCTC | 1 cut(s) | 266 |
| MboII | GAAGA | 6 cut(s) | 201, 236, 397, 496, 580, 694 |
| MflI | RGATCY | 1 cut(s) | 626 |
| MhlI | GDGCHC | 6 cut(s) | 9, 437, 585, 782, 830, 901 |
| Mly113I | GGCGCC | 2 cut(s) | 260, 557 |
| MlyI | GAGTC | 3 cut(s) | 247, 292, 317 |
| MmeI | TCCRAC | 4 cut(s) | 175, 275, 320, 618 |
| MroI | TCCGGA | 1 cut(s) | 856 |
| MroNI | GCCGGC | 1 cut(s) | 700 |
| MseI | TTAA | 1 cut(s) | 564 |
| MslI | CAYNNNNRTG | 1 cut(s) | 904 |
| MspA1I | CMGCKG | 1 cut(s) | 734 |
| MspR9I | CCNGG | 4 cut(s) | 145, 521, 748, 830 |
| MvaI | CCWGG | 1 cut(s) | 748 |
| MvnI | CGCG | 8 cut(s) | 63, 156, 374, 392, 407, 722, 852, 911 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 175 |
| NaeI | GCCGGC | 1 cut(s) | 702 |
| NarI | GGCGCC | 2 cut(s) | 260, 557 |
| NciI | CCSGG | 3 cut(s) | 145, 521, 830 |
| NgoMIV | GCCGGC | 1 cut(s) | 700 |
| NlaIII | CATG | 3 cut(s) | 343, 448, 909 |
| NlaIV | GGNNCC | 7 cut(s) | 149, 261, 513, 558, 575, 640, 827 |
| NmuCI | GTSAC | 1 cut(s) | 271 |
| NruI | TCGCGA | 1 cut(s) | 407 |
| NspI | RCATGY | 1 cut(s) | 909 |
| PaeI | GCATGC | 1 cut(s) | 909 |
| PauI | GCGCGC | 1 cut(s) | 850 |
| PciSI | GCTCTTC | 1 cut(s) | 380 |
| PcsI | WCGNNNNNNNCGW | 6 cut(s) | 434, 437, 446, 591, 882, 886 |
| PdiI | GCCGGC | 1 cut(s) | 702 |
| PfeI | GAWTC | 3 cut(s) | 18, 172, 691 |
| Pfl23II | CGTACG | 1 cut(s) | 886 |
| PflFI | GACNNNGTC | 1 cut(s) | 156 |
| PfoI | TCCNGGA | 1 cut(s) | 746 |
| PkrI | GCNGC | 2 cut(s) | 36, 473 |
| Ple19I | CGATCG | 2 cut(s) | 306, 880 |
| PleI | GAGTC | 3 cut(s) | 247, 292, 316 |
| PluTI | GGCGCC | 2 cut(s) | 263, 560 |
| PmaCI | CACGTG | 1 cut(s) | 844 |
| PmlI | CACGTG | 1 cut(s) | 844 |
| PpsI | GAGTC | 3 cut(s) | 247, 292, 316 |
| Ppu21I | YACGTR | 1 cut(s) | 844 |
| Psp124BI | GAGCTC | 1 cut(s) | 437 |
| Psp6I | CCWGG | 1 cut(s) | 746 |
| PspCI | CACGTG | 1 cut(s) | 844 |
| PspFI | CCCAGC | 1 cut(s) | 327 |
| PspGI | CCWGG | 1 cut(s) | 746 |
| PspLI | CGTACG | 1 cut(s) | 886 |
| PspN4I | GGNNCC | 7 cut(s) | 149, 261, 513, 558, 575, 640, 827 |
| PspPI | GGNCC | 5 cut(s) | 58, 132, 158, 360, 511 |
| PstNI | CAGNNNCTG | 1 cut(s) | 275 |
| PsuI | RGATCY | 1 cut(s) | 626 |
| PsyI | GACNNNGTC | 1 cut(s) | 156 |
| PteI | GCGCGC | 1 cut(s) | 850 |
| PvuI | CGATCG | 2 cut(s) | 306, 880 |
| RruI | TCGCGA | 1 cut(s) | 407 |
| RsaI | GTAC | 5 cut(s) | 73, 743, 758, 814, 888 |
| RsaNI | GTAC | 5 cut(s) | 72, 742, 757, 813, 887 |
| RseI | CAYNNNNRTG | 1 cut(s) | 904 |
| Rsr2I | CGGWCCG | 2 cut(s) | 132, 158 |
| RsrII | CGGWCCG | 2 cut(s) | 132, 158 |
| SacI | GAGCTC | 1 cut(s) | 437 |
| SalI | GTCGAC | 1 cut(s) | 65 |
| SapI | GCTCTTC | 1 cut(s) | 380 |
| SaqAI | TTAA | 1 cut(s) | 564 |
| SatI | GCNGC | 2 cut(s) | 35, 472 |
| Sau96I | GGNCC | 5 cut(s) | 58, 132, 158, 360, 511 |
| ScaI | AGTACT | 1 cut(s) | 743 |
| SchI | GAGTC | 3 cut(s) | 247, 292, 317 |
| ScrFI | CCNGG | 4 cut(s) | 145, 521, 748, 830 |
| SduI | GDGCHC | 6 cut(s) | 9, 437, 585, 782, 830, 901 |
| SfaNI | GCATC | 1 cut(s) | 861 |
| SfoI | GGCGCC | 2 cut(s) | 261, 558 |
| SinI | GGWCC | 2 cut(s) | 132, 158 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 904 |
| SphI | GCATGC | 1 cut(s) | 909 |
| SsiI | CCGC | 8 cut(s) | 61, 156, 264, 392, 516, 722, 734, 911 |
| SspDI | GGCGCC | 2 cut(s) | 259, 556 |
| SstI | GAGCTC | 1 cut(s) | 437 |
| StyD4I | CCNGG | 4 cut(s) | 143, 519, 746, 828 |
| StyI | CCWWGG | 1 cut(s) | 791 |
| TaaI | ACNGT | 6 cut(s) | 42, 71, 94, 277, 761, 817 |
| TaiI | ACGT | 4 cut(s) | 605, 846, 888, 922 |
| TaqI | TCGA | 8 cut(s) | 66, 306, 311, 348, 377, 431, 500, 876 |
| TatI | WGTACW | 1 cut(s) | 741 |
| TfiI | GAWTC | 3 cut(s) | 18, 172, 691 |
| Tru1I | TTAA | 1 cut(s) | 564 |
| Tru9I | TTAA | 1 cut(s) | 564 |
| TscAI | CASTG | 2 cut(s) | 276, 427 |
| TseFI | GTSAC | 1 cut(s) | 271 |
| TseI | GCWGC | 2 cut(s) | 34, 471 |
| Tsp45I | GTSAC | 1 cut(s) | 271 |
| TspDTI | ATGAA | 1 cut(s) | 433 |
| TspGWI | ACGGA | 1 cut(s) | 89 |
| TspRI | CASTG | 2 cut(s) | 276, 427 |
| Tth111I | GACNNNGTC | 1 cut(s) | 156 |
| VpaK11BI | GGWCC | 2 cut(s) | 132, 158 |
| XceI | RCATGY | 1 cut(s) | 909 |
| XmiI | GTMKAC | 1 cut(s) | 66 |
| ZrmI | AGTACT | 1 cut(s) | 743 |