Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002068

Physical Location & Seq

Genomic Coordinates Forward (+)

6356153 .. 6361348

Gene Structure 5196 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G085400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGGATTCCTCCTCCAGCTCCATGAAAATCTCACCATTGGATCTGATGGCGGCGATCATCAAGGGCAAAATGGACCCCAGCAACGCCTCCGCCGACTTATCCGGCGCCCAGGTCACCTCCGTCATGCTCGAGAACCGCGAGTTCGTCATGATCTTGACCACCTCCATTGCCGTCCTAATCGGCTGCGTCGTCGTTTTGATTTGGCGGCGATCGTCGGCCCCTCCGAAGCCGCGAGTCATTCAGCCTCCCGCGCCCGTGATCGTGACGTCTGAGCCGGAGGTCGACGACGGGACCAAGAAGGTCACCATCTTCTTCGGCACCCAGACCGGTACCGCCGAAGGCTTCGCGAAGGCTTTGGCCGAGGAAGGAAAAGCTCGATACGAGAAGGTCACATTCAAAGTTGTTGATTTGGACGATTATGCTGCTGATGACGAAGCATATGAGGAGAAATTGAAGAAGGAAAGCTTGGCATTTTTCTTCTTGGCCACATATGGTGATGGTGAGCCAACCGATAATGCTGCCAGGTTTTACAAGTGGTTTACGGAGGGTAATGAGAGAGGAGAGTGGCTTCAGACGCTTCATTACGGAGTGTTTGGCCTTGGAAACAGGCAGTATGAGCATTTCAACAAGGTTGCTGTGGTTGTTGATGATGTCCTCACTGAGCAGGGTGCGAAGCGGCTTGTTCCAGTGGGTCTCGGAGATGATGATCAATGCATTGAGGATGACTTCAGTGCATGGCGAGAGTCTGTTTGGCCTGAGTTGGATCAGTTGCTTCGAGATGAGGATGATGCAATGACACCAATTTCTACACCTTACACTGCTGCTGTGTTGGAGTATCGAGTTGTAATTGAAGATTCTGCAGATGCATCAGTAGAGAATAAGAGCTGGAATAATGCAAATGGTCATGCTGTCATTGATGCTCAACATCCATGCAGAGCTAATGTGGCTGTGAGAAAGGAACTTCATACTCCTGCATCTGACCGTTCTTGCACCCATCTCGAATTTGATATTGCTGGCACTGGACTTACATACGAGACTGGGGATCATGTTGGTGTCTACTGTGAGAATCTTCCTGAAATTGTGGAAGAGGCGCTAAGCTTGTTGGGCTTGTCGCCAGAAACATATTTCTCGATACACACTGATAAGGAGGATGGCACACCACTTAGTGGAAGCTCCTTGGCACCTCCTTTCCCACCGTGCACACTAAGAACAGCACTAACTCGATATGCTGATCTTTTAAGTTCTCCCAAAAAGTCTGCCTTACTCGCTTTAGCAGCTCATGCATCTGACCCAACGGAAGCAGACCGACTAAGACATCTTGCATCACCTGCTGGAAAGGATGAATATGCACAATGGGTGGTTGCAAGTCAGAGAAGCCTTCTTGAGGTCATGGCTGAATATCCATCAGCCAAGCCCCCACTTGGTGTCTTCTTTGCAGCAGTCGCCCCACGATTGCAGCCTAGATACTATTCAATCTCATCATCCCCAAGGATGGCGTCTTCTAGGATTCATGTAACCTGTGCATTAGTTTATGAGAAGACACCAACAGGAAGGATTCACAAAGGAGTGTGTTCAACCTGGATGAAGAATTCTGTGCCTTTGGAGAAGAGCGATGATCCTAGTTGGGCACCCATTTTTGTTCGGCAGTCAAACTTCAGACTTCCTACTGACACTAAAGTACCCATTATCATGATTGGTCCTGGGACTGGATTGGCTCCTTTCAGGGGTTTCCTGCAGGAAAGATTAGCTCTTATAGAAGCTGGAGCGGAACTGGGACCCTCCACATTGTTCTTTGGATGTAGAAATAGTAAAACGGATTACATTTACGAAGATGAGCTGAACAACTTCTTAGAAACTGGTGCACTTTCTGAGCTAGTGGTTGCATTCTCACGCCAGGGACCCACCAAGGAATATGTGCAGCATAAAATGACGCAGAAGGCCTCAGACATCTGGAACATGCTATCTCAGGGAGCTTATATTTATGTTTGTGGTGATGCTAAGGGCATGGCCAGGGATGTCCACCGGACTCTTCACACAATAGTGCAGGAGCAGGGATCTCTGGACAGCTCCAAAGCCGAGAGCATGGTGAAAAATCTGCAAATGAGTGGCAGGTATCTGCGTGATGTGTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003958 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006725 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009698 GO:0009987 GO:0012505 GO:0016491 GO:0016651 GO:0016653 GO:0019748 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0055114 GO:0071704 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_1 Flavodoxin_1 NAD_binding_1

Protein Analysis

711

Amino Acids

78.23

Weight (kDa)

5.11

Isoelectric Point (pI)

39.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002068)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30210 AT4G30210 AT4G30210
fragaria_vesca	FvH4_4g08180
malus_domestica	MD13G1253300.v1.1 MD16G1257600.v1.1
prunus_persica	Prupe.1G085400_v2.0.a1
pyrus_communis	pycom12480g00040 pycom13g22470
rosa_chinensis	RchiOBHm_Chr1g0334331 RchiOBHm_Chr4g0402381 RchiOBHm_Chr4g0402391 RchiOBHm_Chr4g0419591 RchiOBHm_Chr7g0226121
rosa_laevigata	RLG00000009089 RLG00000009093 RLG00000009097 RLG00000009098
rosa_multiflora	Rmu_co8074388.1_g000001 Rmu_sc0002660.1_g000001 Rmu_sc0023635.1_g000001
rosa_roxburghii	Rroxscaffold_1G00022590 Rroxscaffold_5G00347040 Rroxscaffold_5G00347050
rosa_rugosa	Rorug03G0293000 Rorug04G0034500 Rorug04G0034500 Rorug04G0034600 Rorug04G0034700 Rorug04G0034800 Rorug04G0034900 Rorug04G0035000 Rorug05G0246500
rosa_samantha	Rh4AG112500 Rh4AG112600 Rh4BG105000 Rh4BG105100 Rh4CG004400 Rh4CG119300 Rh4CG119400 Rh4DG104000 Rh4DG104100 Rh5AG337100
rosa_wichuraiana	Rw4G009010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1336
AatII	GACGTC	1 cut(s)	269
Acc36I	ACCTGC	2 cut(s)	1336, 2100
Acc65I	GGTACC	1 cut(s)	329
AccB1I	GGYRCC	5 cut(s)	104, 317, 329, 1180, 1627
AccB7I	CCANNNNNTGG	1 cut(s)	1166
AccBSI	CCGCTC	1 cut(s)	1766
AccI	GTMKAC	2 cut(s)	282, 1056
AccII	CGCG	4 cut(s)	138, 232, 251, 347
AciI	CCGC	9 cut(s)	50, 90, 136, 205, 230, 249, 333, 676, 1766
AclWI	GGATC	5 cut(s)	48, 771, 1050, 1610, 2062
AcoI	YGGCCR	3 cut(s)	357, 483, 2007
AcsI	RAATTY	2 cut(s)	1001, 1588
AcuI	CTGAAG	3 cut(s)	554, 712, 1639
AcyI	GRCGYC	3 cut(s)	105, 266, 1496
AdeI	CACNNNGTG	2 cut(s)	1166, 1424
AfaI	GTAC	2 cut(s)	331, 1680
AfiI	CCNNNNNNNGG	6 cut(s)	1166, 1384, 1421, 1492, 1706, 1724
AgeI	ACCGGT	1 cut(s)	326
AgsI	TTSAA	6 cut(s)	397, 454, 625, 851, 1473, 1575
AjnI	CCWGG	6 cut(s)	108, 521, 1577, 1699, 1893, 2009
AjuI	GAANNNNNNNTTGG	2 cut(s)	449, 481
AleI	CACNNNNGTG	1 cut(s)	2039
Alw21I	GWGCWC	2 cut(s)	1202, 1864
Alw26I	GTCTC	2 cut(s)	698, 1028
Alw44I	GTGCAC	2 cut(s)	1198, 1860
AlwI	GGATC	5 cut(s)	48, 771, 1050, 1610, 2062
Ama87I	CYCGRG	1 cut(s)	128
AoxI	GGCC	7 cut(s)	216, 357, 483, 595, 752, 1938, 2007
ApaLI	GTGCAC	2 cut(s)	1198, 1860
ApeKI	GCWGC	8 cut(s)	183, 422, 518, 821, 1274, 1436, 1456, 1918
ApoI	RAATTY	2 cut(s)	1001, 1588
AsiGI	ACCGGT	1 cut(s)	326
Asp700I	GAANNNNTTC	1 cut(s)	1844
Asp718I	GGTACC	1 cut(s)	329
AspLEI	GCGC	3 cut(s)	107, 253, 1093
AspS9I	GGNCC	6 cut(s)	73, 217, 291, 1697, 1775, 1898
AsuHPI	GGTGA	8 cut(s)	24, 106, 295, 506, 512, 1317, 2003, 2098
AvaI	CYCGRG	1 cut(s)	128
AvaII	GGWCC	5 cut(s)	73, 291, 1697, 1775, 1898
BaeGI	GKGCMC	3 cut(s)	1202, 1630, 1864
BaeI	ACNNNNGTAYC	2 cut(s)	1662, 1695
BalI	TGGCCA	2 cut(s)	485, 2009
BanI	GGYRCC	5 cut(s)	104, 317, 329, 1180, 1627
BbsI	GAAGAC	3 cut(s)	1420, 1491, 1544
Bbv12I	GWGCWC	2 cut(s)	1202, 1864
BbvI	GCAGC	8 cut(s)	170, 409, 505, 808, 1286, 1448, 1468, 1930
BccI	CCATC	7 cut(s)	40, 314, 491, 1002, 1145, 1411, 1486
BceAI	ACGGC	1 cut(s)	155
BcgI	CGANNNNNNTGC	6 cut(s)	404, 438, 500, 534, 979, 1013
BciT130I	CCWGG	6 cut(s)	110, 523, 1579, 1701, 1895, 2011
BclI	TGATCA	1 cut(s)	706
BcoDI	GTCTC	2 cut(s)	698, 1028
BfaI	CTAG	4 cut(s)	1461, 1503, 1620, 1874
BfmI	CTRYAG	2 cut(s)	858, 1733
BfoI	RGCGCY	2 cut(s)	108, 1094
BfuAI	ACCTGC	2 cut(s)	1336, 2100
BlpI	GCTNAGC	1 cut(s)	1094
Bme1390I	CCNGG	6 cut(s)	110, 523, 1579, 1701, 1895, 2011
Bme18I	GGWCC	5 cut(s)	73, 291, 1697, 1775, 1898
BmeT110I	CYCGRG	1 cut(s)	128
BmgT120I	GGNCC	6 cut(s)	73, 217, 291, 1697, 1775, 1898
BmrFI	CCNGG	6 cut(s)	110, 523, 1579, 1701, 1895, 2011
BmrI	ACTGGG	2 cut(s)	1047, 1781
BmsI	GCATC	8 cut(s)	778, 853, 875, 907, 983, 1292, 1331, 1984
BmuI	ACTGGG	2 cut(s)	1047, 1781
BpiI	GAAGAC	3 cut(s)	1420, 1491, 1544
BpmI	CTGGAG	1 cut(s)	1782
Bpu10I	CCTNAGC	1 cut(s)	1998
Bpu1102I	GCTNAGC	1 cut(s)	1094
BpuEI	CTTGAG	1 cut(s)	1403
BsaBI	GATNNNNATC	1 cut(s)	705
BsaHI	GRCGYC	3 cut(s)	105, 266, 1496
BsaI	GGTCTC	1 cut(s)	698
BsaJI	CCNNGG	9 cut(s)	108, 360, 598, 1176, 1487, 1700, 1894, 1905, 2010
BsaWI	WCCGGW	2 cut(s)	326, 2022
Bsc4I	CCNNNNNNNGG	6 cut(s)	1166, 1384, 1421, 1492, 1706, 1724
Bse118I	RCCGGY	1 cut(s)	326
Bse1I	ACTGG	6 cut(s)	686, 1024, 1042, 1711, 1776, 1861
Bse3DI	GCAATG	2 cut(s)	165, 798
Bse8I	GATNNNNATC	1 cut(s)	705
BseBI	CCWGG	6 cut(s)	110, 523, 1579, 1701, 1895, 2011
BseDI	CCNNGG	9 cut(s)	108, 360, 598, 1176, 1487, 1700, 1894, 1905, 2010
BseJI	GATNNNNATC	1 cut(s)	705
BseLI	CCNNNNNNNGG	6 cut(s)	1166, 1384, 1421, 1492, 1706, 1724
BseMI	GCAATG	2 cut(s)	165, 798
BseMII	CTCAG	6 cut(s)	261, 651, 747, 1860, 1956, 1979
BseNI	ACTGG	6 cut(s)	686, 1024, 1042, 1711, 1776, 1861
BseRI	GAGGAG	2 cut(s)	458, 573
BseSI	GKGCMC	3 cut(s)	1202, 1630, 1864
BseXI	GCAGC	8 cut(s)	170, 409, 505, 808, 1286, 1448, 1468, 1930
BseYI	CCCAGC	1 cut(s)	77
BsgI	GTGCAG	2 cut(s)	1937, 2063
Bsh1236I	CGCG	4 cut(s)	138, 232, 251, 347
Bsh1285I	CGRYCG	1 cut(s)	212
BshFI	GGCC	7 cut(s)	218, 359, 485, 597, 754, 1940, 2009
BshNI	GGYRCC	5 cut(s)	104, 317, 329, 1180, 1627
BshTI	ACCGGT	1 cut(s)	326
BsiEI	CGRYCG	1 cut(s)	212
BsiHKAI	GWGCWC	2 cut(s)	1202, 1864
BsiHKCI	CYCGRG	1 cut(s)	128
BsiSI	CCGG	4 cut(s)	102, 275, 327, 2023
BslFI	GGGAC	4 cut(s)	304, 1717, 1788, 1911
BslI	CCNNNNNNNGG	6 cut(s)	1166, 1384, 1421, 1492, 1706, 1724
BsmAI	GTCTC	2 cut(s)	698, 1028
BsmFI	GGGAC	4 cut(s)	304, 1717, 1788, 1911
BsmI	GAATGC	1 cut(s)	1883
BsnI	GGCC	7 cut(s)	218, 359, 485, 597, 754, 1940, 2009
Bso31I	GGTCTC	1 cut(s)	698
BsoBI	CYCGRG	1 cut(s)	128
Bsp1286I	GDGCHC	3 cut(s)	1202, 1630, 1864
Bsp1720I	GCTNAGC	1 cut(s)	1094
Bsp68I	TCGCGA	1 cut(s)	347
BspACI	CCGC	9 cut(s)	50, 90, 136, 205, 230, 249, 333, 676, 1766
BspANI	GGCC	7 cut(s)	218, 359, 485, 597, 754, 1940, 2009
BspCNI	CTCAG	6 cut(s)	262, 652, 748, 1861, 1955, 1978
BspFNI	CGCG	4 cut(s)	138, 232, 251, 347
BspHI	TCATGA	2 cut(s)	147, 1689
BspMAI	CTGCAG	2 cut(s)	862, 1737
BspMI	ACCTGC	2 cut(s)	1336, 2100
BspPI	GGATC	5 cut(s)	48, 771, 1050, 1610, 2062
BspQI	GCTCTTC	1 cut(s)	1601
BspT107I	GGYRCC	5 cut(s)	104, 317, 329, 1180, 1627
BspTNI	GGTCTC	1 cut(s)	698
BsrBI	CCGCTC	1 cut(s)	1766
BsrDI	GCAATG	2 cut(s)	165, 798
BsrFI	RCCGGY	1 cut(s)	326
BsrI	ACTGG	6 cut(s)	686, 1024, 1042, 1711, 1776, 1861
BssAI	RCCGGY	1 cut(s)	326
BssECI	CCNNGG	9 cut(s)	108, 360, 598, 1176, 1487, 1700, 1894, 1905, 2010
BssNI	GRCGYC	3 cut(s)	105, 266, 1496
BssT1I	CCWWGG	4 cut(s)	598, 1176, 1487, 1905
Bst2UI	CCWGG	6 cut(s)	110, 523, 1579, 1701, 1895, 2011
Bst4CI	ACNGT	3 cut(s)	983, 1061, 1197
Bst6I	CTCTTC	3 cut(s)	1080, 1601, 2034
BstACI	GRCGYC	3 cut(s)	105, 266, 1496
BstAPI	GCANNNNNTGC	2 cut(s)	1280, 1328
BstC8I	GCNNGC	1 cut(s)	1015
BstEII	GGTNACC	2 cut(s)	112, 301
BstENI	CCTNNNNNAGG	1 cut(s)	1382
BstFNI	CGCG	4 cut(s)	138, 232, 251, 347
BstH2I	RGCGCY	2 cut(s)	108, 1094
BstHHI	GCGC	3 cut(s)	107, 253, 1093
BstMAI	GTCTC	2 cut(s)	698, 1028
BstMCI	CGRYCG	1 cut(s)	212
BstNI	CCWGG	6 cut(s)	110, 523, 1579, 1701, 1895, 2011
BstNSI	RCATGY	1 cut(s)	1960
BstPI	GGTNACC	2 cut(s)	112, 301
BstSCI	CCNGG	6 cut(s)	108, 521, 1577, 1699, 1893, 2009
BstSFI	CTRYAG	2 cut(s)	858, 1733
BstSLI	GKGCMC	3 cut(s)	1202, 1630, 1864
BstUI	CGCG	4 cut(s)	138, 232, 251, 347
BstV1I	GCAGC	8 cut(s)	170, 409, 505, 808, 1286, 1448, 1468, 1930
BstV2I	GAAGAC	3 cut(s)	1420, 1491, 1544
BstX2I	RGATCY	2 cut(s)	40, 2054
BstYI	RGATCY	2 cut(s)	40, 2054
BsuRI	GGCC	7 cut(s)	218, 359, 485, 597, 754, 1940, 2009
BtgZI	GCGATG	1 cut(s)	1626
BtsI	GCAGTG	1 cut(s)	816
BtsIMutI	CAGTG	6 cut(s)	657, 693, 736, 816, 1017, 1137
BtuMI	TCGCGA	1 cut(s)	347
BveI	ACCTGC	2 cut(s)	1336, 2100
Cac8I	GCNNGC	1 cut(s)	1015
CciI	TCATGA	2 cut(s)	147, 1689
CfoI	GCGC	3 cut(s)	107, 253, 1093
Cfr10I	RCCGGY	1 cut(s)	326
Cfr13I	GGNCC	6 cut(s)	73, 217, 291, 1697, 1775, 1898
CseI	GACGC	4 cut(s)	175, 583, 1485, 1939
Csp6I	GTAC	2 cut(s)	330, 1679
CspAI	ACCGGT	1 cut(s)	326
CspCI	CAANNNNNGTGG	2 cut(s)	148, 183
CviQI	GTAC	2 cut(s)	330, 1679
DinI	GGCGCC	1 cut(s)	106
DraIII	CACNNNGTG	2 cut(s)	1166, 1424
EaeI	YGGCCR	3 cut(s)	357, 483, 2007
Eam1104I	CTCTTC	3 cut(s)	1080, 1601, 2034
EarI	CTCTTC	3 cut(s)	1080, 1601, 2034
EciI	GGCGGA	1 cut(s)	79
Eco130I	CCWWGG	4 cut(s)	598, 1176, 1487, 1905
Eco147I	AGGCCT	1 cut(s)	1940
Eco31I	GGTCTC	1 cut(s)	698
Eco47I	GGWCC	5 cut(s)	73, 291, 1697, 1775, 1898
Eco57I	CTGAAG	3 cut(s)	554, 712, 1639
Eco88I	CYCGRG	1 cut(s)	128
Eco91I	GGTNACC	2 cut(s)	112, 301
EcoNI	CCTNNNNNAGG	1 cut(s)	1382
EcoO109I	RGGNCCY	2 cut(s)	1775, 1898
EcoO65I	GGTNACC	2 cut(s)	112, 301
EcoRI	GAATTC	1 cut(s)	1588
EcoRII	CCWGG	6 cut(s)	108, 521, 1577, 1699, 1893, 2009
EcoT14I	CCWWGG	4 cut(s)	598, 1176, 1487, 1905
EcoT22I	ATGCAT	3 cut(s)	716, 868, 1285
EgeI	GGCGCC	1 cut(s)	106
EheI	GGCGCC	1 cut(s)	106
ErhI	CCWWGG	4 cut(s)	598, 1176, 1487, 1905
FalI	AAGNNNNNCTT	4 cut(s)	449, 481, 1244, 1276
FaqI	GGGAC	4 cut(s)	304, 1717, 1788, 1911
FauI	CCCGC	1 cut(s)	256
FauNDI	CATATG	2 cut(s)	439, 490
FbaI	TGATCA	1 cut(s)	706
FblI	GTMKAC	2 cut(s)	282, 1056
FspBI	CTAG	4 cut(s)	1461, 1503, 1620, 1874
GlaI	GCGC	3 cut(s)	106, 252, 1092
GsaI	CCCAGC	1 cut(s)	81
GsuI	CTGGAG	1 cut(s)	1782
HaeII	RGCGCY	2 cut(s)	108, 1094
HaeIII	GGCC	7 cut(s)	218, 359, 485, 597, 754, 1940, 2009
HapII	CCGG	4 cut(s)	102, 275, 327, 2023
HgaI	GACGC	4 cut(s)	175, 583, 1485, 1939
HhaI	GCGC	3 cut(s)	107, 253, 1093
Hin1I	GRCGYC	3 cut(s)	105, 266, 1496
Hin6I	GCGC	3 cut(s)	105, 251, 1091
HinP1I	GCGC	3 cut(s)	105, 251, 1091
HincII	GTYRAC	1 cut(s)	283
HindII	GTYRAC	1 cut(s)	283
HindIII	AAGCTT	2 cut(s)	463, 1096
HinfI	GANTC	8 cut(s)	5, 234, 743, 854, 1066, 1507, 1555, 2026
HpaII	CCGG	4 cut(s)	102, 275, 327, 2023
HphI	GGTGA	8 cut(s)	24, 106, 295, 506, 512, 1317, 2003, 2098
Hpy166II	GTNNAC	6 cut(s)	283, 540, 1057, 1200, 1862, 2020
Hpy8I	GTNNAC	6 cut(s)	283, 540, 1057, 1200, 1862, 2020
Hpy99I	CGWCG	5 cut(s)	191, 194, 217, 287, 290
HpyAV	CCTTC	9 cut(s)	292, 332, 343, 359, 379, 451, 1388, 1545, 1930
HpyCH4III	ACNGT	3 cut(s)	983, 1061, 1197
HpyCH4IV	ACGT	1 cut(s)	266
HpySE526I	ACGT	1 cut(s)	266
Hsp92I	GRCGYC	3 cut(s)	105, 266, 1496
HspAI	GCGC	3 cut(s)	105, 251, 1091
KasI	GGCGCC	1 cut(s)	104
KflI	GGGWCCC	2 cut(s)	1775, 1898
KpnI	GGTACC	1 cut(s)	333
Ksp22I	TGATCA	1 cut(s)	706
LguI	GCTCTTC	1 cut(s)	1601
LmnI	GCTCC	7 cut(s)	23, 1178, 1720, 1763, 1970, 2047, 2072
Lsp1109I	GCAGC	8 cut(s)	170, 409, 505, 808, 1286, 1448, 1468, 1930
LweI	GCATC	8 cut(s)	778, 853, 875, 907, 983, 1292, 1331, 1984
MaeI	CTAG	4 cut(s)	1461, 1503, 1620, 1874
MaeII	ACGT	1 cut(s)	266
MaeIII	GTNAC	5 cut(s)	112, 262, 301, 388, 1513
MbiI	CCGCTC	1 cut(s)	1766
MflI	RGATCY	2 cut(s)	40, 2054
MhlI	GDGCHC	3 cut(s)	1202, 1630, 1864
MlsI	TGGCCA	2 cut(s)	485, 2009
MluCI	AATT	6 cut(s)	449, 801, 846, 1001, 1077, 1588
MluNI	TGGCCA	2 cut(s)	485, 2009
Mly113I	GGCGCC	1 cut(s)	105
MlyI	GAGTC	3 cut(s)	243, 752, 2020
MmeI	TCCRAC	2 cut(s)	741, 810
Mox20I	TGGCCA	2 cut(s)	485, 2009
Mph1103I	ATGCAT	3 cut(s)	716, 868, 1285
MroXI	GAANNNNTTC	1 cut(s)	1844
MscI	TGGCCA	2 cut(s)	485, 2009
MseI	TTAA	1 cut(s)	1238
MslI	CAYNNNNRTG	3 cut(s)	1050, 1688, 2039
Msp20I	TGGCCA	2 cut(s)	485, 2009
MspI	CCGG	4 cut(s)	102, 275, 327, 2023
MspR9I	CCNGG	6 cut(s)	110, 523, 1579, 1701, 1895, 2011
Mva1269I	GAATGC	1 cut(s)	1883
MvaI	CCWGG	6 cut(s)	110, 523, 1579, 1701, 1895, 2011
MvnI	CGCG	4 cut(s)	138, 232, 251, 347
NarI	GGCGCC	1 cut(s)	105
NdeI	CATATG	2 cut(s)	439, 490
NmeAIII	GCCGAG	2 cut(s)	385, 2101
NmuCI	GTSAC	4 cut(s)	112, 262, 301, 388
NruI	TCGCGA	1 cut(s)	347
NsiI	ATGCAT	3 cut(s)	716, 868, 1285
NspI	RCATGY	1 cut(s)	1960
OliI	CACNNNNGTG	1 cut(s)	2039
PaeR7I	CTCGAG	1 cut(s)	128
PagI	TCATGA	2 cut(s)	147, 1689
PaqCI	CACCTGC	1 cut(s)	1336
PceI	AGGCCT	1 cut(s)	1940
PciSI	GCTCTTC	1 cut(s)	1601
PcsI	WCGNNNNNNNCGW	4 cut(s)	90, 135, 186, 221
PctI	GAATGC	1 cut(s)	1883
PdmI	GAANNNNTTC	1 cut(s)	1844
PfeI	GAWTC	5 cut(s)	5, 854, 1066, 1507, 1555
PflMI	CCANNNNNTGG	1 cut(s)	1166
PinAI	ACCGGT	1 cut(s)	326
Ple19I	CGATCG	1 cut(s)	212
PleI	GAGTC	3 cut(s)	242, 751, 2020
PluTI	GGCGCC	1 cut(s)	108
PpsI	GAGTC	3 cut(s)	242, 751, 2020
PpuMI	RGGWCCY	2 cut(s)	1775, 1898
Psp5II	RGGWCCY	2 cut(s)	1775, 1898
Psp6I	CCWGG	6 cut(s)	108, 521, 1577, 1699, 1893, 2009
PspEI	GGTNACC	2 cut(s)	112, 301
PspFI	CCCAGC	1 cut(s)	77
PspGI	CCWGG	6 cut(s)	108, 521, 1577, 1699, 1893, 2009
PspPI	GGNCC	6 cut(s)	73, 217, 291, 1697, 1775, 1898
PspPPI	RGGWCCY	2 cut(s)	1775, 1898
PstI	CTGCAG	2 cut(s)	862, 1737
PsuI	RGATCY	2 cut(s)	40, 2054
PvuI	CGATCG	1 cut(s)	212
RruI	TCGCGA	1 cut(s)	347
RsaI	GTAC	2 cut(s)	331, 1680
RsaNI	GTAC	2 cut(s)	330, 1679
RseI	CAYNNNNRTG	3 cut(s)	1050, 1688, 2039
SalI	GTCGAC	1 cut(s)	281
SapI	GCTCTTC	1 cut(s)	1601
SaqAI	TTAA	1 cut(s)	1238
Sau96I	GGNCC	6 cut(s)	73, 217, 291, 1697, 1775, 1898
SbfI	CCTGCAGG	1 cut(s)	1737
SchI	GAGTC	3 cut(s)	243, 752, 2020
ScrFI	CCNGG	6 cut(s)	110, 523, 1579, 1701, 1895, 2011
SdaI	CCTGCAGG	1 cut(s)	1737
SduI	GDGCHC	3 cut(s)	1202, 1630, 1864
SfaNI	GCATC	8 cut(s)	778, 853, 875, 907, 983, 1292, 1331, 1984
SfcI	CTRYAG	2 cut(s)	858, 1733
SfoI	GGCGCC	1 cut(s)	106
Sfr274I	CTCGAG	1 cut(s)	128
SinI	GGWCC	5 cut(s)	73, 291, 1697, 1775, 1898
SlaI	CTCGAG	1 cut(s)	128
SmiMI	CAYNNNNRTG	3 cut(s)	1050, 1688, 2039
SmlI	CTYRAG	2 cut(s)	128, 1382
SmoI	CTYRAG	2 cut(s)	128, 1382
Sse8387I	CCTGCAGG	1 cut(s)	1737
Sse9I	AATT	6 cut(s)	449, 801, 846, 1001, 1077, 1588
SseBI	AGGCCT	1 cut(s)	1940
SsiI	CCGC	9 cut(s)	50, 90, 136, 205, 230, 249, 333, 676, 1766
SspDI	GGCGCC	1 cut(s)	104
SspMI	CTAG	4 cut(s)	1461, 1503, 1620, 1874
StuI	AGGCCT	1 cut(s)	1940
StyD4I	CCNGG	6 cut(s)	108, 521, 1577, 1699, 1893, 2009
StyI	CCWWGG	4 cut(s)	598, 1176, 1487, 1905
TaaI	ACNGT	3 cut(s)	983, 1061, 1197
TaiI	ACGT	1 cut(s)	269
TaqI	TCGA	8 cut(s)	129, 282, 376, 775, 838, 999, 1130, 1222
TaqII	GACCGA	1 cut(s)	1320
TasI	AATT	6 cut(s)	449, 801, 846, 1001, 1077, 1588
TauI	GCSGC	4 cut(s)	53, 208, 232, 679
TfiI	GAWTC	5 cut(s)	5, 854, 1066, 1507, 1555
Tru1I	TTAA	1 cut(s)	1238
Tru9I	TTAA	1 cut(s)	1238
TscAI	CASTG	6 cut(s)	664, 693, 736, 823, 1024, 1144
TseFI	GTSAC	4 cut(s)	112, 262, 301, 388
TseI	GCWGC	8 cut(s)	183, 422, 518, 821, 1274, 1436, 1456, 1918
Tsp45I	GTSAC	4 cut(s)	112, 262, 301, 388
TspDTI	ATGAA	6 cut(s)	38, 569, 953, 1356, 1499, 1598
TspGWI	ACGGA	5 cut(s)	109, 557, 600, 1310, 1829
TspRI	CASTG	6 cut(s)	664, 693, 736, 823, 1024, 1144
Van91I	CCANNNNNTGG	1 cut(s)	1166
VneI	GTGCAC	2 cut(s)	1198, 1860
VpaK11BI	GGWCC	5 cut(s)	73, 291, 1697, 1775, 1898
XagI	CCTNNNNNAGG	1 cut(s)	1382
XapI	RAATTY	2 cut(s)	1001, 1588
XceI	RCATGY	1 cut(s)	1960
XhoI	CTCGAG	1 cut(s)	128
XmiI	GTMKAC	2 cut(s)	282, 1056
XmnI	GAANNNNTTC	1 cut(s)	1844
XspI	CTAG	4 cut(s)	1461, 1503, 1620, 1874
ZraI	GACGTC	1 cut(s)	267
Zsp2I	ATGCAT	3 cut(s)	716, 868, 1285

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.