Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0002068

Physical Location & Seq

Genomic Coordinates Reverse (-)

46394008 .. 46400103

Gene Structure 6096 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000009093

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1476 bp

ATGGAATTTGATGAATATGCTCAGTGGATGGTTGCGAGTCAGAGAAGCCTTCTTGAGGTCATGGCTGAATTTCCATCAGCCAAGCCCCCACTTGGAGTCTTCTTTGCAGCAGTTACTCCAAGGTTGCAGCCTAGATACTATTCAATCTCGTCATCCCCGAGGATGGCACCATCTAGAATTCATGTTACTTGTGCACTAGTTTTTGACAAAACATCAACAGGAAGGATTCACAAAGGAGTGTGTTCAACCTGGATGAAGAATTCTGTGCCTTCCGCAAAAAGTGATGATTGTAGTTGGGCACCAGTTTTTGTTCGGCAATCAAACTTCAGACTTCCCGTTGATACCAAAGTACCTATTCTTATGATTGGTCCTGGAACTGGATTGGCTCCTTTCAGGGGTTTCCTGAAGGAGAGATTAGCTCTTAAAGAAGATGGAGCAGAACTTGGACCCTCCGTATTATTCTTTGGATGTAGAAATAGTCAAATGGACTACATTTATGAAGATGAGCTGAACAACTTTGTAGAAAAAGGTGCAGTTTTTGAGCTTGTGGTTGCATTCTCCAGCCAGGGACCCACTAAGGAATATGTGCAACATAAAATGATGCATAAGGCTTCAGACATCTGGAACATGCTATCTCAGGGAGGTTATATTTACGTTTGTGGTGATGCTAAAGGCATGGCCAGGGATGTCCACCGGACTCTTCACAATATCGTGCAGGAGCAGGTATGTGAATATAAGCAGCTATTTAGAATTTTTGGCATGCGGTCACAGTTGTCACCTACCTATTATGAAGATGCTACGATCTGCCGTCCCCTCACCTGGCCCGGATCCGACCCGACCCTCCCTTCCCTCGTCCTCAACTCCCACCTCGACTCCATCCCCGCCGAGCCCTCCAAGTGGGCCGACCCTCCCTTCTCGGCCCACCGCACCCCCGAAGGCCACATCTTCGCTCGTGGCACCCAGAACGACAAGTGCATCGCCATCCAGTACCTCGAGGCCATCAGCAATCTCAAAGCCACAGGCTTCAACCCAATTGGCACTATCCACGTGTCCTACGTCCCCAACCAGAAGATCGGTGGCCTCGACGGTGCCGCCAAGTTCACCGTCTCTGACGAGTTCAAGGAACTGAAGGTCGAGTTTGTTTTGGACGAGGATCAGACCACCCCCGGCAATGAGATTCGGGTCTTTTACGCTGATCGGATGCCGTGGAATTTGATCGTCAAGGCGAAGGGGACACCAAAATCCAGGTGGGTCTTGTCGGAAATTCAGTCCAGGAATAACAGTATCATCAGGCTCTCTGGTTATTATTACTTAAGGAGGAGGAGGTTCAGGGTCTGCTGCAAAGCTCAAGAATCAGCTAACAAAAGCAATGGCAAGCTCTTCAATTTTGCTGTTTGGTTTCGTTTCTGGGTTGTTTATTTTGATGGTGTTTCAGTTAAAGAATCTTTCTTTATGAGTTTAGTTTGGAAGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003958 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006725 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009698 GO:0009987 GO:0012505 GO:0016491 GO:0016651 GO:0016653 GO:0019748 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0055114 GO:0071704 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_1 Flavodoxin_1 NAD_binding_1

Protein Analysis

492

Amino Acids

55.76

Weight (kDa)

8.98

Isoelectric Point (pI)

44.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_1	PF00667	4 - 84	2e-25	FAD binding domain
NAD_binding_1	PF00175	121 - 231	7.1e-16	Oxidoreductase NAD-binding domain
Peptidase_M20	PF01546	285 - 382	1.4e-12	Peptidase family M20/M25/M40

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002068)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30210 AT4G30210 AT4G30210
fragaria_vesca	FvH4_4g08180
malus_domestica	MD13G1253300.v1.1 MD16G1257600.v1.1
prunus_persica	Prupe.1G085400_v2.0.a1
pyrus_communis	pycom12480g00040 pycom13g22470
rosa_chinensis	RchiOBHm_Chr1g0334331 RchiOBHm_Chr4g0402381 RchiOBHm_Chr4g0402391 RchiOBHm_Chr4g0419591 RchiOBHm_Chr7g0226121
rosa_laevigata	RLG00000009089 RLG00000009093 RLG00000009097 RLG00000009098
rosa_multiflora	Rmu_co8074388.1_g000001 Rmu_sc0002660.1_g000001 Rmu_sc0023635.1_g000001
rosa_roxburghii	Rroxscaffold_1G00022590 Rroxscaffold_5G00347040 Rroxscaffold_5G00347050
rosa_rugosa	Rorug03G0293000 Rorug04G0034500 Rorug04G0034500 Rorug04G0034600 Rorug04G0034700 Rorug04G0034800 Rorug04G0034900 Rorug04G0035000 Rorug05G0246500
rosa_samantha	Rh4AG112500 Rh4AG112600 Rh4BG105000 Rh4BG105100 Rh4CG004400 Rh4CG119300 Rh4CG119400 Rh4DG104000 Rh4DG104100 Rh5AG337100
rosa_wichuraiana	Rw4G009010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	992
Acc36I	ACCTGC	1 cut(s)	712
AccB1I	GGYRCC	4 cut(s)	166, 298, 956, 1088
AciI	CCGC	5 cut(s)	273, 763, 882, 925, 1092
AclWI	GGATC	3 cut(s)	822, 835, 1161
AcoI	YGGCCR	1 cut(s)	678
AcsI	RAATTY	7 cut(s)	5, 68, 177, 259, 750, 1210, 1263
AcuI	CTGAAG	4 cut(s)	310, 425, 597, 1148
AcvI	CACGTG	1 cut(s)	1048
AfaI	GTAC	2 cut(s)	351, 989
AfiI	CCNNNNNNNGG	7 cut(s)	55, 92, 163, 377, 395, 819, 897
AflII	CTTAAG	1 cut(s)	1312
AflIII	ACRYGT	1 cut(s)	1047
AgsI	TTSAA	5 cut(s)	144, 246, 1027, 1120, 1384
AhlI	ACTAGT	1 cut(s)	196
AjnI	CCWGG	7 cut(s)	248, 370, 564, 680, 818, 1244, 1271
AluBI	AGCT	7 cut(s)	419, 508, 544, 742, 1346, 1358, 1378
AluI	AGCT	7 cut(s)	419, 508, 544, 742, 1346, 1358, 1378
Alw21I	GWGCWC	1 cut(s)	196
Alw26I	GTCTC	1 cut(s)	1111
Alw44I	GTGCAC	1 cut(s)	192
AlwI	GGATC	3 cut(s)	822, 835, 1161
AlwNI	CAGNNNCTG	1 cut(s)	1335
Ama87I	CYCGRG	2 cut(s)	157, 992
AoxI	GGCC	7 cut(s)	678, 821, 900, 918, 937, 996, 1078
ApaLI	GTGCAC	1 cut(s)	192
ApeKI	GCWGC	4 cut(s)	107, 127, 739, 1338
ApoI	RAATTY	7 cut(s)	5, 68, 177, 259, 750, 1210, 1263
AspS9I	GGNCC	6 cut(s)	368, 446, 569, 822, 900, 919
AsuC2I	CCSGG	2 cut(s)	825, 1167
AsuHPI	GGTGA	4 cut(s)	674, 768, 808, 1093
AvaI	CYCGRG	2 cut(s)	157, 992
AvaII	GGWCC	3 cut(s)	368, 446, 569
BaeGI	GKGCMC	2 cut(s)	196, 301
BaeI	ACNNNNGTAYC	4 cut(s)	333, 333, 366, 366
BalI	TGGCCA	1 cut(s)	680
BamHI	GGATCC	1 cut(s)	827
BanI	GGYRCC	4 cut(s)	166, 298, 956, 1088
BanII	GRGCYC	1 cut(s)	891
BauI	CACGAG	1 cut(s)	951
BbrPI	CACGTG	1 cut(s)	1048
BbsI	GAAGAC	1 cut(s)	91
Bbv12I	GWGCWC	1 cut(s)	196
BbvI	GCAGC	4 cut(s)	119, 139, 751, 1325
BccI	CCATC	9 cut(s)	22, 82, 157, 178, 425, 884, 989, 1007, 1418
BceAI	ACGGC	2 cut(s)	792, 1189
BciT130I	CCWGG	7 cut(s)	250, 372, 566, 682, 820, 1246, 1273
BcnI	CCSGG	2 cut(s)	825, 1167
BcoDI	GTCTC	1 cut(s)	1111
BcuI	ACTAGT	1 cut(s)	196
BfaI	CTAG	3 cut(s)	132, 174, 197
BfrI	CTTAAG	1 cut(s)	1312
BfuAI	ACCTGC	1 cut(s)	712
BisI	GCNGC	5 cut(s)	108, 128, 740, 1092, 1339
BlsI	GCNGC	5 cut(s)	109, 129, 741, 1093, 1340
Bme1390I	CCNGG	9 cut(s)	250, 372, 566, 682, 820, 825, 1167, 1246, 1273
Bme18I	GGWCC	3 cut(s)	368, 446, 569
BmeT110I	CYCGRG	2 cut(s)	157, 992
BmgT120I	GGNCC	6 cut(s)	368, 446, 569, 822, 900, 919
BmiI	GGNNCC	9 cut(s)	168, 300, 387, 448, 570, 571, 829, 958, 1090
BmrFI	CCNGG	9 cut(s)	250, 372, 566, 682, 820, 825, 1167, 1246, 1273
BmsI	GCATC	5 cut(s)	591, 655, 784, 984, 1191
BpiI	GAAGAC	1 cut(s)	91
BplI	GAGNNNNNCTC	2 cut(s)	403, 435
BpmI	CTGGAG	1 cut(s)	544
BpuEI	CTTGAG	2 cut(s)	74, 1332
BpuMI	CCSGG	2 cut(s)	825, 1167
BsaAI	YACGTR	1 cut(s)	1048
BsaJI	CCNNGG	6 cut(s)	119, 158, 565, 681, 1165, 1205
BsaWI	WCCGGW	1 cut(s)	693
BsaXI	ACNNNNNCTCC	2 cut(s)	857, 887
Bsc4I	CCNNNNNNNGG	7 cut(s)	55, 92, 163, 377, 395, 819, 897
Bse1I	ACTGG	3 cut(s)	302, 382, 985
Bse3DI	GCAATG	2 cut(s)	1177, 1375
BseBI	CCWGG	7 cut(s)	250, 372, 566, 682, 820, 1246, 1273
BseDI	CCNNGG	6 cut(s)	119, 158, 565, 681, 1165, 1205
BseGI	GGATG	9 cut(s)	33, 152, 168, 258, 473, 691, 876, 981, 1206
BseLI	CCNNNNNNNGG	7 cut(s)	55, 92, 163, 377, 395, 819, 897
BseMI	GCAATG	2 cut(s)	1177, 1375
BseMII	CTCAG	2 cut(s)	35, 650
BseNI	ACTGG	3 cut(s)	302, 382, 985
BseRI	GAGGAG	2 cut(s)	1333, 1336
BseSI	GKGCMC	2 cut(s)	196, 301
BseXI	GCAGC	4 cut(s)	119, 139, 751, 1325
BsgI	GTGCAG	2 cut(s)	552, 734
BshFI	GGCC	7 cut(s)	680, 823, 902, 920, 939, 998, 1080
BshNI	GGYRCC	4 cut(s)	166, 298, 956, 1088
BsiHKAI	GWGCWC	1 cut(s)	196
BsiHKCI	CYCGRG	2 cut(s)	157, 992
BsiSI	CCGG	3 cut(s)	694, 825, 1167
BslFI	GGGAC	4 cut(s)	582, 795, 1043, 1246
BslI	CCNNNNNNNGG	7 cut(s)	55, 92, 163, 377, 395, 819, 897
BsmAI	GTCTC	1 cut(s)	1111
BsmBI	CGTCTC	1 cut(s)	1111
BsmFI	GGGAC	4 cut(s)	582, 795, 1043, 1246
BsmI	GAATGC	1 cut(s)	554
BsnI	GGCC	7 cut(s)	680, 823, 902, 920, 939, 998, 1080
BsoBI	CYCGRG	2 cut(s)	157, 992
Bsp1286I	GDGCHC	3 cut(s)	196, 301, 891
Bsp143I	GATC	6 cut(s)	801, 827, 1071, 1153, 1195, 1215
BspACI	CCGC	5 cut(s)	273, 763, 882, 925, 1092
BspANI	GGCC	7 cut(s)	680, 823, 902, 920, 939, 998, 1080
BspCNI	CTCAG	2 cut(s)	34, 649
BspLI	GGNNCC	9 cut(s)	168, 300, 387, 448, 570, 571, 829, 958, 1090
BspMI	ACCTGC	1 cut(s)	712
BspPI	GGATC	3 cut(s)	822, 835, 1161
BspQI	GCTCTTC	1 cut(s)	1385
BspT107I	GGYRCC	4 cut(s)	166, 298, 956, 1088
BspTI	CTTAAG	1 cut(s)	1312
BsrDI	GCAATG	2 cut(s)	1177, 1375
BsrI	ACTGG	3 cut(s)	302, 382, 985
BssECI	CCNNGG	6 cut(s)	119, 158, 565, 681, 1165, 1205
BssMI	GATC	6 cut(s)	801, 827, 1071, 1153, 1195, 1215
BssSI	CACGAG	1 cut(s)	951
BssT1I	CCWWGG	1 cut(s)	119
Bst2BI	CACGAG	1 cut(s)	951
Bst2UI	CCWGG	7 cut(s)	250, 372, 566, 682, 820, 1246, 1273
Bst4CI	ACNGT	4 cut(s)	771, 1088, 1105, 1283
Bst6I	CTCTTC	2 cut(s)	705, 1385
BstAFI	CTTAAG	1 cut(s)	1312
BstBAI	YACGTR	1 cut(s)	1048
BstC8I	GCNNGC	2 cut(s)	761, 1376
BstDEI	CTNAG	3 cut(s)	21, 576, 636
BstDSI	CCRYGG	1 cut(s)	1205
BstENI	CCTNNNNNAGG	1 cut(s)	53
BstF5I	GGATG	9 cut(s)	33, 152, 168, 258, 473, 691, 876, 981, 1206
BstKTI	GATC	6 cut(s)	804, 830, 1074, 1156, 1198, 1218
BstMAI	GTCTC	1 cut(s)	1111
BstMBI	GATC	6 cut(s)	801, 827, 1071, 1153, 1195, 1215
BstNI	CCWGG	7 cut(s)	250, 372, 566, 682, 820, 1246, 1273
BstNSI	RCATGY	2 cut(s)	631, 763
BstSCI	CCNGG	9 cut(s)	248, 370, 564, 680, 818, 823, 1165, 1244, 1271
BstSLI	GKGCMC	2 cut(s)	196, 301
BstV1I	GCAGC	4 cut(s)	119, 139, 751, 1325
BstV2I	GAAGAC	1 cut(s)	91
BstX2I	RGATCY	1 cut(s)	827
BstYI	RGATCY	1 cut(s)	827
BsuRI	GGCC	7 cut(s)	680, 823, 902, 920, 939, 998, 1080
BtgI	CCRYGG	1 cut(s)	1205
BtgZI	GCGATG	1 cut(s)	961
BtsCI	GGATG	9 cut(s)	33, 152, 168, 258, 473, 691, 876, 981, 1206
BtsIMutI	CAGTG	1 cut(s)	29
BveI	ACCTGC	1 cut(s)	712
Cac8I	GCNNGC	2 cut(s)	761, 1376
CaiI	CAGNNNCTG	1 cut(s)	1335
Cfr13I	GGNCC	6 cut(s)	368, 446, 569, 822, 900, 919
Csp6I	GTAC	2 cut(s)	350, 988
CviAII	CATG	5 cut(s)	61, 182, 628, 676, 760
CviQI	GTAC	2 cut(s)	350, 988
DdeI	CTNAG	3 cut(s)	21, 576, 636
DpnI	GATC	6 cut(s)	803, 829, 1073, 1155, 1197, 1217
DpnII	GATC	6 cut(s)	801, 827, 1071, 1153, 1195, 1215
EaeI	YGGCCR	1 cut(s)	678
Eam1104I	CTCTTC	2 cut(s)	705, 1385
EarI	CTCTTC	2 cut(s)	705, 1385
Eco130I	CCWWGG	1 cut(s)	119
Eco24I	GRGCYC	1 cut(s)	891
Eco47I	GGWCC	3 cut(s)	368, 446, 569
Eco57I	CTGAAG	4 cut(s)	310, 425, 597, 1148
Eco72I	CACGTG	1 cut(s)	1048
Eco88I	CYCGRG	2 cut(s)	157, 992
EcoNI	CCTNNNNNAGG	1 cut(s)	53
EcoO109I	RGGNCCY	1 cut(s)	569
EcoRI	GAATTC	2 cut(s)	177, 259
EcoRII	CCWGG	7 cut(s)	248, 370, 564, 680, 818, 1244, 1271
EcoT14I	CCWWGG	1 cut(s)	119
EcoT22I	ATGCAT	1 cut(s)	606
EcoT38I	GRGCYC	1 cut(s)	891
ErhI	CCWWGG	1 cut(s)	119
Esp3I	CGTCTC	1 cut(s)	1111
FaeI	CATG	5 cut(s)	64, 185, 631, 679, 763
FaqI	GGGAC	4 cut(s)	582, 795, 1043, 1246
FatI	CATG	5 cut(s)	60, 181, 627, 675, 759
FauI	CCCGC	1 cut(s)	889
Fnu4HI	GCNGC	5 cut(s)	108, 128, 740, 1092, 1339
FokI	GGATG	9 cut(s)	40, 139, 175, 265, 480, 698, 863, 968, 1213
FriOI	GRGCYC	1 cut(s)	891
Fsp4HI	GCNGC	5 cut(s)	108, 128, 740, 1092, 1339
FspBI	CTAG	3 cut(s)	132, 174, 197
GluI	GCNGC	5 cut(s)	108, 128, 740, 1092, 1339
GsuI	CTGGAG	1 cut(s)	544
HaeIII	GGCC	7 cut(s)	680, 823, 902, 920, 939, 998, 1080
HapII	CCGG	3 cut(s)	694, 825, 1167
Hin1II	CATG	5 cut(s)	64, 185, 631, 679, 763
HinfI	GANTC	8 cut(s)	37, 96, 226, 697, 872, 1177, 1352, 1442
HpaII	CCGG	3 cut(s)	694, 825, 1167
HphI	GGTGA	4 cut(s)	674, 768, 808, 1093
Hpy166II	GTNNAC	3 cut(s)	194, 691, 1101
Hpy188I	TCNGA	8 cut(s)	42, 329, 616, 832, 1111, 1158, 1200, 1261
Hpy188III	TCNNGA	5 cut(s)	53, 174, 403, 622, 1349
Hpy8I	GTNNAC	3 cut(s)	194, 691, 1101
Hpy99I	CGWCG	1 cut(s)	1088
HpyAV	CCTTC	9 cut(s)	59, 216, 279, 400, 855, 922, 929, 1123, 1222
HpyCH4III	ACNGT	4 cut(s)	771, 1088, 1105, 1283
HpyCH4IV	ACGT	3 cut(s)	654, 1047, 1056
HpyF3I	CTNAG	3 cut(s)	21, 576, 636
HpySE526I	ACGT	3 cut(s)	654, 1047, 1056
Hsp92II	CATG	5 cut(s)	64, 185, 631, 679, 763
KflI	GGGWCCC	1 cut(s)	569
Kzo9I	GATC	6 cut(s)	801, 827, 1071, 1153, 1195, 1215
LguI	GCTCTTC	1 cut(s)	1385
LmnI	GCTCC	3 cut(s)	391, 434, 718
Lsp1109I	GCAGC	4 cut(s)	119, 139, 751, 1325
LweI	GCATC	5 cut(s)	591, 655, 784, 984, 1191
MaeI	CTAG	3 cut(s)	132, 174, 197
MaeII	ACGT	3 cut(s)	654, 1047, 1056
MaeIII	GTNAC	4 cut(s)	112, 184, 765, 774
MalI	GATC	6 cut(s)	803, 829, 1073, 1155, 1197, 1217
MboI	GATC	6 cut(s)	801, 827, 1071, 1153, 1195, 1215
MboII	GAAGA	9 cut(s)	91, 268, 440, 512, 692, 803, 937, 1081, 1372
MfeI	CAATTG	1 cut(s)	1032
MflI	RGATCY	1 cut(s)	827
MhlI	GDGCHC	3 cut(s)	196, 301, 891
MlsI	TGGCCA	1 cut(s)	680
MluCI	AATT	9 cut(s)	5, 68, 177, 259, 750, 1032, 1210, 1263, 1384
MluNI	TGGCCA	1 cut(s)	680
MlyI	GAGTC	4 cut(s)	46, 105, 691, 866
MmeI	TCCRAC	2 cut(s)	855, 1239
Mox20I	TGGCCA	1 cut(s)	680
Mph1103I	ATGCAT	1 cut(s)	606
MscI	TGGCCA	1 cut(s)	680
MseI	TTAA	3 cut(s)	423, 1313, 1437
Msp20I	TGGCCA	1 cut(s)	680
MspCI	CTTAAG	1 cut(s)	1312
MspI	CCGG	3 cut(s)	694, 825, 1167
MspR9I	CCNGG	9 cut(s)	250, 372, 566, 682, 820, 825, 1167, 1246, 1273
MunI	CAATTG	1 cut(s)	1032
Mva1269I	GAATGC	1 cut(s)	554
MvaI	CCWGG	7 cut(s)	250, 372, 566, 682, 820, 1246, 1273
NciI	CCSGG	2 cut(s)	825, 1167
NdeII	GATC	6 cut(s)	801, 827, 1071, 1153, 1195, 1215
NlaIII	CATG	5 cut(s)	64, 185, 631, 679, 763
NlaIV	GGNNCC	9 cut(s)	168, 300, 387, 448, 570, 571, 829, 958, 1090
NmeAIII	GCCGAG	2 cut(s)	896, 910
NmuCI	GTSAC	2 cut(s)	765, 774
NsiI	ATGCAT	1 cut(s)	606
NspI	RCATGY	2 cut(s)	631, 763
PaeI	GCATGC	1 cut(s)	763
PaeR7I	CTCGAG	1 cut(s)	992
PciSI	GCTCTTC	1 cut(s)	1385
PcsI	WCGNNNNNNNCGW	3 cut(s)	155, 1053, 1080
PctI	GAATGC	1 cut(s)	554
PfeI	GAWTC	4 cut(s)	226, 1177, 1352, 1442
PfoI	TCCNGGA	2 cut(s)	370, 1271
PkrI	GCNGC	5 cut(s)	109, 129, 741, 1093, 1340
PleI	GAGTC	4 cut(s)	45, 104, 691, 866
PmaCI	CACGTG	1 cut(s)	1048
PmlI	CACGTG	1 cut(s)	1048
PpsI	GAGTC	4 cut(s)	45, 104, 691, 866
Ppu21I	YACGTR	1 cut(s)	1048
PpuMI	RGGWCCY	1 cut(s)	569
Psp5II	RGGWCCY	1 cut(s)	569
Psp6I	CCWGG	7 cut(s)	248, 370, 564, 680, 818, 1244, 1271
PspCI	CACGTG	1 cut(s)	1048
PspGI	CCWGG	7 cut(s)	248, 370, 564, 680, 818, 1244, 1271
PspN4I	GGNNCC	9 cut(s)	168, 300, 387, 448, 570, 571, 829, 958, 1090
PspPI	GGNCC	6 cut(s)	368, 446, 569, 822, 900, 919
PspPPI	RGGWCCY	1 cut(s)	569
PspXI	VCTCGAGB	1 cut(s)	992
PstNI	CAGNNNCTG	1 cut(s)	1335
PsuI	RGATCY	1 cut(s)	827
RsaI	GTAC	2 cut(s)	351, 989
RsaNI	GTAC	2 cut(s)	350, 988
SapI	GCTCTTC	1 cut(s)	1385
SaqAI	TTAA	3 cut(s)	423, 1313, 1437
SatI	GCNGC	5 cut(s)	108, 128, 740, 1092, 1339
Sau3AI	GATC	6 cut(s)	801, 827, 1071, 1153, 1195, 1215
Sau96I	GGNCC	6 cut(s)	368, 446, 569, 822, 900, 919
SchI	GAGTC	4 cut(s)	46, 105, 691, 866
ScrFI	CCNGG	9 cut(s)	250, 372, 566, 682, 820, 825, 1167, 1246, 1273
SduI	GDGCHC	3 cut(s)	196, 301, 891
SfaNI	GCATC	5 cut(s)	591, 655, 784, 984, 1191
Sfr274I	CTCGAG	1 cut(s)	992
SinI	GGWCC	3 cut(s)	368, 446, 569
SlaI	CTCGAG	1 cut(s)	992
SmlI	CTYRAG	4 cut(s)	53, 992, 1312, 1347
SmoI	CTYRAG	4 cut(s)	53, 992, 1312, 1347
SpeI	ACTAGT	1 cut(s)	196
SphI	GCATGC	1 cut(s)	763
Sse9I	AATT	9 cut(s)	5, 68, 177, 259, 750, 1032, 1210, 1263, 1384
SsiI	CCGC	5 cut(s)	273, 763, 882, 925, 1092
SspMI	CTAG	3 cut(s)	132, 174, 197
StyD4I	CCNGG	9 cut(s)	248, 370, 564, 680, 818, 823, 1165, 1244, 1271
StyI	CCWWGG	1 cut(s)	119
TaaI	ACNGT	4 cut(s)	771, 1088, 1105, 1283
TaiI	ACGT	3 cut(s)	657, 1050, 1059
TaqI	TCGA	4 cut(s)	870, 993, 1083, 1134
TasI	AATT	9 cut(s)	5, 68, 177, 259, 750, 1032, 1210, 1263, 1384
TauI	GCSGC	1 cut(s)	1094
TfiI	GAWTC	4 cut(s)	226, 1177, 1352, 1442
Tru1I	TTAA	3 cut(s)	423, 1313, 1437
Tru9I	TTAA	3 cut(s)	423, 1313, 1437
TscAI	CASTG	1 cut(s)	29
TseFI	GTSAC	2 cut(s)	765, 774
TseI	GCWGC	4 cut(s)	107, 127, 739, 1338
Tsp45I	GTSAC	2 cut(s)	765, 774
TspDTI	ATGAA	5 cut(s)	27, 170, 269, 513, 804
TspGWI	ACGGA	1 cut(s)	442
TspRI	CASTG	1 cut(s)	29
Vha464I	CTTAAG	1 cut(s)	1312
VneI	GTGCAC	1 cut(s)	192
VpaK11BI	GGWCC	3 cut(s)	368, 446, 569
XagI	CCTNNNNNAGG	1 cut(s)	53
XapI	RAATTY	7 cut(s)	5, 68, 177, 259, 750, 1210, 1263
XbaI	TCTAGA	1 cut(s)	173
XceI	RCATGY	2 cut(s)	631, 763
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1073, 1245
XhoI	CTCGAG	1 cut(s)	992
XspI	CTAG	3 cut(s)	132, 174, 197
Zsp2I	ATGCAT	1 cut(s)	606

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.