Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0002068

Physical Location & Seq

Genomic Coordinates Forward (+)

5214520 .. 5221267

Gene Structure 6748 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0035000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGGCCATGGGCAGCAGCAGAGTAGCTCATCACCACAATCTCAAACATCATTCCCAACGCCCTAATTCTATTTCGTCTTTCTTCTCCCCGAAGCTCTCCATCTACATCCTCGCTTCCTGCGTCGCCCTCTTCGTCATCTTCCACATCCAGTCCCTTCAAACTCCACCTGAATCCACATCGTCGCTGCCTTCATGGTCTCTCAATCTCATGCGCCAGTGGCAGAGAGTCATCAACACCACTACCACTGCCGCCACCGCCACAGCGGAAGAAACTACATCCACGTCCTTCACCAACAACTACACCAACGAGCTCAACGCACTAAGAGACAAACTCCGGCAGTCAGTCACGTTTCTCCCGCTCAAGGACTTACGTTACGCCCATGCGGCCCTCGTCGGGCACACGTGGTTCATGAGCTCCATGTACGACTCAAGTGACGAAGAAGGCGAGGTCCAGTACCAGCACTTCCCTTCACAGTTGTCGAGCAACAGACTCCTCTGCCTCAAAGGCCGCGACAACCATGACGGCACCTGGAACTCATATGCCCTTGCGTGGCCAGACGTGCTTCCCCACAACGCAACCCTAATGACCGGTCTGTCCTTCATTTCCTACAACCACTACAGCTACGACAATATATGGCACGGCCTCGCCGCCGTCATGCCCTTTGTAGCGTGGCACAAGAAGAACTCATGCGCCAAACCTGATCGGTGGATTTTGTACCACTGGGGGGAGATTAGGTCCAGGATGGCAGTGTGGCTTAGTACTCTTATGGAGGCTACTTTTGGAGGTCCGCCGTTCGTGGAAGTGTTTAACGGGGTTGAGGAAGGGAGGGCGGTTTGTTTCGAGGAGGCGGTGGTGATGAGGCACAACGAAGGTGGGATGTCTAGGGATCAGAGAATGGAGGTTTATGATCTAATGCGGTGTAAGGCCAGGGCTTACTGTAATGTGAGTTCGGAAGGGGAAGATCGTCGGAGGAAGATTGGAATGACGTTGTTCATGAGGACAGGACCGAGATCGTTCAAGAACGAGAGTGCGGTGGTTGGGATCTTTGAGAAAGAATGTGCCAAGGTTGACGGTTGCCGCTTGGTGGTGGCTCACTCCAACAACCTCACTTTCTGTGACCAGGTGAAGCTAATGAGCATGACAGATATTTTGATGTCACCACACGGCGCGCAGTTAACCAACATGTTCTTAATGGATAGAAACAGTAGTGTGATGGAGTTCTTCCCAAAAGGGTGGCTAAAACTAGCCGGTGTAGGACAATTCGTCTATCACTGGATTGCCAGTTGGTCGGGTATGAGACACCATGGTGCATGGCGAGACCCGAACGGAGAACTTTGCCAGTACAGTGAAGACGATCGCCGATGCATGTCCCTCTACAAGAATGGCAAAATTGGATACAATGAAACATATTTTTCTGAGTGGAGTAGAAATATACTCAATGAAGTTAAGAAAAGGAAGATGGAAGAAGTAGCAAATGGTGCTCTTCTAAGTCCTACTGGCTGTTTTTGTCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003958 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006725 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009698 GO:0009987 GO:0012505 GO:0016491 GO:0016651 GO:0016653 GO:0019748 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0055114 GO:0071704 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_1 Flavodoxin_1 NAD_binding_1

Protein Analysis

504

Amino Acids

57.6

Weight (kDa)

8.34

Isoelectric Point (pI)

51.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_61	PF04577	257 - 405	6.2e-14	Glycosyltransferase 61

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002068)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30210 AT4G30210 AT4G30210
fragaria_vesca	FvH4_4g08180
malus_domestica	MD13G1253300.v1.1 MD16G1257600.v1.1
prunus_persica	Prupe.1G085400_v2.0.a1
pyrus_communis	pycom12480g00040 pycom13g22470
rosa_chinensis	RchiOBHm_Chr1g0334331 RchiOBHm_Chr4g0402381 RchiOBHm_Chr4g0402391 RchiOBHm_Chr4g0419591 RchiOBHm_Chr7g0226121
rosa_laevigata	RLG00000009089 RLG00000009093 RLG00000009097 RLG00000009098
rosa_multiflora	Rmu_co8074388.1_g000001 Rmu_sc0002660.1_g000001 Rmu_sc0023635.1_g000001
rosa_roxburghii	Rroxscaffold_1G00022590 Rroxscaffold_5G00347040 Rroxscaffold_5G00347050
rosa_rugosa	Rorug03G0293000 Rorug04G0034500 Rorug04G0034500 Rorug04G0034600 Rorug04G0034700 Rorug04G0034800 Rorug04G0034900 Rorug04G0035000 Rorug05G0246500
rosa_samantha	Rh4AG112500 Rh4AG112600 Rh4BG105000 Rh4BG105100 Rh4CG004400 Rh4CG119300 Rh4CG119400 Rh4DG104000 Rh4DG104100 Rh5AG337100
rosa_wichuraiana	Rw4G009010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	592
AccB1I	GGYRCC	1 cut(s)	524
AccBSI	CCGCTC	1 cut(s)	358
AccII	CGCG	2 cut(s)	510, 1169
AclWI	GGATC	2 cut(s)	894, 1049
AcoI	YGGCCR	2 cut(s)	3, 551
AcvI	CACGTG	1 cut(s)	402
AfaI	GTAC	5 cut(s)	422, 455, 716, 760, 1343
AfiI	CCNNNNNNNGG	5 cut(s)	361, 393, 549, 724, 1084
AflIII	ACRYGT	2 cut(s)	399, 1182
AgeI	ACCGGT	1 cut(s)	587
AgsI	TTSAA	2 cut(s)	158, 1018
AhdI	GACNNNNNGTC	1 cut(s)	1262
AjiI	CACGTC	2 cut(s)	282, 559
AjnI	CCWGG	4 cut(s)	527, 737, 926, 1119
AleI	CACNNNNGTG	1 cut(s)	1305
AluBI	AGCT	6 cut(s)	26, 94, 310, 414, 621, 1129
AluI	AGCT	6 cut(s)	26, 94, 310, 414, 621, 1129
Alw21I	GWGCWC	3 cut(s)	312, 416, 1483
Alw26I	GTCTC	4 cut(s)	201, 318, 1291, 1311
AlwI	GGATC	2 cut(s)	894, 1049
AoxI	GGCC	6 cut(s)	3, 384, 505, 551, 640, 924
ApeKI	GCWGC	3 cut(s)	12, 15, 184
ArsI	GACNNNNNNTTYG	2 cut(s)	1132, 1164
AsiGI	ACCGGT	1 cut(s)	587
AspLEI	GCGC	4 cut(s)	213, 692, 1169, 1171
AspS9I	GGNCC	5 cut(s)	385, 448, 735, 785, 1004
AsuHPI	GGTGA	5 cut(s)	23, 280, 865, 1135, 1149
AvaII	GGWCC	4 cut(s)	448, 735, 785, 1004
BaeGI	GKGCMC	1 cut(s)	399
BalI	TGGCCA	2 cut(s)	5, 553
BanI	GGYRCC	1 cut(s)	524
BanII	GRGCYC	2 cut(s)	312, 416
BarI	GAAGNNNNNNTAC	2 cut(s)	446, 478
BbrPI	CACGTG	1 cut(s)	402
BbsI	GAAGAC	1 cut(s)	1356
Bbv12I	GWGCWC	3 cut(s)	312, 416, 1483
BbvI	GCAGC	3 cut(s)	24, 27, 171
BccI	CCATC	4 cut(s)	107, 736, 1207, 1453
BceAI	ACGGC	5 cut(s)	538, 635, 655, 775, 1180
BciT130I	CCWGG	4 cut(s)	529, 739, 928, 1121
BciVI	GTATCC	1 cut(s)	1388
BcoDI	GTCTC	4 cut(s)	201, 318, 1291, 1311
BfaI	CTAG	2 cut(s)	882, 1244
BfmI	CTRYAG	1 cut(s)	616
BfuI	GTATCC	1 cut(s)	1388
BglI	GCCNNNNNGGC	2 cut(s)	383, 504
BisI	GCNGC	8 cut(s)	13, 16, 185, 249, 384, 508, 648, 1078
BlsI	GCNGC	8 cut(s)	14, 17, 186, 250, 385, 509, 649, 1079
BmcAI	AGTACT	1 cut(s)	760
Bme1390I	CCNGG	4 cut(s)	529, 739, 928, 1121
Bme18I	GGWCC	4 cut(s)	448, 735, 785, 1004
BmeRI	GACNNNNNGTC	1 cut(s)	1262
BmgBI	CACGTC	2 cut(s)	282, 559
BmgT120I	GGNCC	5 cut(s)	385, 448, 735, 785, 1004
BmiI	GGNNCC	1 cut(s)	526
BmrFI	CCNGG	4 cut(s)	529, 739, 928, 1121
BmrI	ACTGGG	1 cut(s)	730
BmsI	GCATC	1 cut(s)	1352
BmuI	ACTGGG	1 cut(s)	730
BpiI	GAAGAC	1 cut(s)	1356
BplI	GAGNNNNNCTC	2 cut(s)	315, 347
BpuEI	CTTGAG	2 cut(s)	344, 412
BsaAI	YACGTR	1 cut(s)	402
BsaI	GGTCTC	2 cut(s)	201, 1311
BsaJI	CCNNGG	4 cut(s)	6, 927, 1062, 1303
BsaWI	WCCGGW	1 cut(s)	587
BsaXI	ACNNNNNCTCC	2 cut(s)	719, 749
Bsc4I	CCNNNNNNNGG	5 cut(s)	361, 393, 549, 724, 1084
Bse118I	RCCGGY	2 cut(s)	587, 1247
Bse1I	ACTGG	8 cut(s)	148, 214, 451, 725, 1277, 1281, 1339, 1501
BseBI	CCWGG	4 cut(s)	529, 739, 928, 1121
BseDI	CCNNGG	4 cut(s)	6, 927, 1062, 1303
BseGI	GGATG	5 cut(s)	105, 144, 275, 747, 882
BseLI	CCNNNNNNNGG	5 cut(s)	361, 393, 549, 724, 1084
BseMII	CTCAG	1 cut(s)	1407
BseNI	ACTGG	8 cut(s)	148, 214, 451, 725, 1277, 1281, 1339, 1501
BsePI	GCGCGC	1 cut(s)	1167
BseRI	GAGGAG	2 cut(s)	482, 857
BseSI	GKGCMC	1 cut(s)	399
BseXI	GCAGC	3 cut(s)	24, 27, 171
Bsh1236I	CGCG	2 cut(s)	510, 1169
Bsh1285I	CGRYCG	1 cut(s)	1357
BshFI	GGCC	6 cut(s)	5, 386, 507, 553, 642, 926
BshNI	GGYRCC	1 cut(s)	524
BshTI	ACCGGT	1 cut(s)	587
BsiEI	CGRYCG	1 cut(s)	1357
BsiHKAI	GWGCWC	3 cut(s)	312, 416, 1483
BsiSI	CCGG	3 cut(s)	334, 588, 1248
BslFI	GGGAC	2 cut(s)	136, 1354
BslI	CCNNNNNNNGG	5 cut(s)	361, 393, 549, 724, 1084
BsmAI	GTCTC	4 cut(s)	201, 318, 1291, 1311
BsmFI	GGGAC	2 cut(s)	136, 1354
BsnI	GGCC	6 cut(s)	5, 386, 507, 553, 642, 926
Bso31I	GGTCTC	2 cut(s)	201, 1311
Bsp1286I	GDGCHC	4 cut(s)	312, 399, 416, 1483
Bsp143I	GATC	7 cut(s)	700, 886, 907, 961, 1010, 1041, 1354
Bsp19I	CCATGG	2 cut(s)	6, 1303
BspANI	GGCC	6 cut(s)	5, 386, 507, 553, 642, 926
BspCNI	CTCAG	1 cut(s)	1408
BspFNI	CGCG	2 cut(s)	510, 1169
BspHI	TCATGA	2 cut(s)	408, 993
BspLI	GGNNCC	1 cut(s)	526
BspPI	GGATC	2 cut(s)	894, 1049
BspQI	GCTCTTC	1 cut(s)	1488
BspT107I	GGYRCC	1 cut(s)	524
BspTNI	GGTCTC	2 cut(s)	201, 1311
BsrBI	CCGCTC	1 cut(s)	358
BsrFI	RCCGGY	2 cut(s)	587, 1247
BsrI	ACTGG	8 cut(s)	148, 214, 451, 725, 1277, 1281, 1339, 1501
BssAI	RCCGGY	2 cut(s)	587, 1247
BssECI	CCNNGG	4 cut(s)	6, 927, 1062, 1303
BssHII	GCGCGC	1 cut(s)	1167
BssMI	GATC	7 cut(s)	700, 886, 907, 961, 1010, 1041, 1354
BssT1I	CCWWGG	3 cut(s)	6, 1062, 1303
Bst2UI	CCWGG	4 cut(s)	529, 739, 928, 1121
Bst4CI	ACNGT	5 cut(s)	474, 938, 1073, 1205, 1346
Bst6I	CTCTTC	2 cut(s)	134, 1488
BstAPI	GCANNNNNTGC	1 cut(s)	1478
BstBAI	YACGTR	1 cut(s)	402
BstC8I	GCNNGC	1 cut(s)	1169
BstDEI	CTNAG	4 cut(s)	320, 755, 1416, 1487
BstDSI	CCRYGG	2 cut(s)	6, 1303
BstF5I	GGATG	5 cut(s)	105, 144, 275, 747, 882
BstFNI	CGCG	2 cut(s)	510, 1169
BstHHI	GCGC	4 cut(s)	213, 692, 1169, 1171
BstKTI	GATC	7 cut(s)	703, 889, 910, 964, 1013, 1044, 1357
BstMAI	GTCTC	4 cut(s)	201, 318, 1291, 1311
BstMBI	GATC	7 cut(s)	700, 886, 907, 961, 1010, 1041, 1354
BstMCI	CGRYCG	1 cut(s)	1357
BstMWI	GCNNNNNNNGC	6 cut(s)	217, 254, 383, 504, 559, 1478
BstNI	CCWGG	4 cut(s)	529, 739, 928, 1121
BstNSI	RCATGY	2 cut(s)	1186, 1369
BstSCI	CCNGG	4 cut(s)	527, 737, 926, 1119
BstSFI	CTRYAG	1 cut(s)	616
BstSLI	GKGCMC	1 cut(s)	399
BstUI	CGCG	2 cut(s)	510, 1169
BstV1I	GCAGC	3 cut(s)	24, 27, 171
BstV2I	GAAGAC	1 cut(s)	1356
BstX2I	RGATCY	1 cut(s)	1041
BstXI	CCANNNNNNTGG	1 cut(s)	1233
BstYI	RGATCY	1 cut(s)	1041
BsuI	GTATCC	1 cut(s)	1388
BsuRI	GGCC	6 cut(s)	5, 386, 507, 553, 642, 926
BtgI	CCRYGG	2 cut(s)	6, 1303
BtrI	CACGTC	2 cut(s)	282, 559
BtsCI	GGATG	5 cut(s)	105, 144, 275, 747, 882
BtsI	GCAGTG	2 cut(s)	243, 753
BtsIMutI	CAGTG	6 cut(s)	221, 243, 718, 753, 1270, 1351
Cac8I	GCNNGC	1 cut(s)	1169
CciI	TCATGA	2 cut(s)	408, 993
CfoI	GCGC	4 cut(s)	213, 692, 1169, 1171
Cfr10I	RCCGGY	2 cut(s)	587, 1247
Cfr13I	GGNCC	5 cut(s)	385, 448, 735, 785, 1004
CseI	GACGC	1 cut(s)	109
CsiI	ACCWGGT	1 cut(s)	1119
Csp6I	GTAC	5 cut(s)	421, 454, 715, 759, 1342
CspAI	ACCGGT	1 cut(s)	587
CspCI	CAANNNNNGTGG	2 cut(s)	853, 888
CviQI	GTAC	5 cut(s)	421, 454, 715, 759, 1342
DdeI	CTNAG	4 cut(s)	320, 755, 1416, 1487
DpnI	GATC	7 cut(s)	702, 888, 909, 963, 1012, 1043, 1356
DpnII	GATC	7 cut(s)	700, 886, 907, 961, 1010, 1041, 1354
DrdI	GACNNNNNNGTC	1 cut(s)	592
DriI	GACNNNNNGTC	1 cut(s)	1262
DseDI	GACNNNNNNGTC	1 cut(s)	592
EaeI	YGGCCR	2 cut(s)	3, 551
Eam1104I	CTCTTC	2 cut(s)	134, 1488
Eam1105I	GACNNNNNGTC	1 cut(s)	1262
EarI	CTCTTC	2 cut(s)	134, 1488
EciI	GGCGGA	1 cut(s)	777
Ecl136II	GAGCTC	2 cut(s)	310, 414
Eco130I	CCWWGG	3 cut(s)	6, 1062, 1303
Eco24I	GRGCYC	2 cut(s)	312, 416
Eco31I	GGTCTC	2 cut(s)	201, 1311
Eco47I	GGWCC	4 cut(s)	448, 735, 785, 1004
Eco53kI	GAGCTC	2 cut(s)	310, 414
Eco72I	CACGTG	1 cut(s)	402
EcoICRI	GAGCTC	2 cut(s)	310, 414
EcoRII	CCWGG	4 cut(s)	527, 737, 926, 1119
EcoT14I	CCWWGG	3 cut(s)	6, 1062, 1303
EcoT22I	ATGCAT	1 cut(s)	1367
EcoT38I	GRGCYC	2 cut(s)	312, 416
ErhI	CCWWGG	3 cut(s)	6, 1062, 1303
FaqI	GGGAC	2 cut(s)	136, 1354
FauI	CCCGC	1 cut(s)	363
FauNDI	CATATG	1 cut(s)	538
Fnu4HI	GCNGC	8 cut(s)	13, 16, 185, 249, 384, 508, 648, 1078
FokI	GGATG	5 cut(s)	92, 131, 262, 754, 889
FriOI	GRGCYC	2 cut(s)	312, 416
Fsp4HI	GCNGC	8 cut(s)	13, 16, 185, 249, 384, 508, 648, 1078
FspBI	CTAG	2 cut(s)	882, 1244
GlaI	GCGC	4 cut(s)	212, 691, 1168, 1170
GluI	GCNGC	8 cut(s)	13, 16, 185, 249, 384, 508, 648, 1078
HaeIII	GGCC	6 cut(s)	5, 386, 507, 553, 642, 926
HapII	CCGG	3 cut(s)	334, 588, 1248
HgaI	GACGC	1 cut(s)	109
HhaI	GCGC	4 cut(s)	213, 692, 1169, 1171
Hin6I	GCGC	4 cut(s)	211, 690, 1167, 1169
HinP1I	GCGC	4 cut(s)	211, 690, 1167, 1169
HincII	GTYRAC	2 cut(s)	1069, 1176
HindII	GTYRAC	2 cut(s)	1069, 1176
HinfI	GANTC	4 cut(s)	170, 225, 425, 489
HpaI	GTTAAC	1 cut(s)	1176
HpaII	CCGG	3 cut(s)	334, 588, 1248
HphI	GGTGA	5 cut(s)	23, 280, 865, 1135, 1149
Hpy166II	GTNNAC	2 cut(s)	1069, 1176
Hpy188I	TCNGA	4 cut(s)	891, 952, 969, 1417
Hpy188III	TCNNGA	3 cut(s)	409, 994, 1018
Hpy8I	GTNNAC	2 cut(s)	1069, 1176
Hpy99I	CGWCG	4 cut(s)	125, 184, 395, 969
HpyAV	CCTTC	9 cut(s)	164, 198, 295, 434, 477, 607, 815, 863, 947
HpyCH4III	ACNGT	5 cut(s)	474, 938, 1073, 1205, 1346
HpyCH4IV	ACGT	6 cut(s)	281, 347, 370, 401, 558, 986
HpyCH4V	TGCA	2 cut(s)	1310, 1365
HpyF10VI	GCNNNNNNNGC	6 cut(s)	217, 254, 383, 504, 559, 1478
HpyF3I	CTNAG	4 cut(s)	320, 755, 1416, 1487
HpySE526I	ACGT	6 cut(s)	281, 347, 370, 401, 558, 986
HspAI	GCGC	4 cut(s)	211, 690, 1167, 1169
KspAI	GTTAAC	1 cut(s)	1176
Kzo9I	GATC	7 cut(s)	700, 886, 907, 961, 1010, 1041, 1354
LguI	GCTCTTC	1 cut(s)	1488
LmnI	GCTCC	1 cut(s)	419
Lsp1109I	GCAGC	3 cut(s)	24, 27, 171
LweI	GCATC	1 cut(s)	1352
MabI	ACCWGGT	1 cut(s)	1119
MaeI	CTAG	2 cut(s)	882, 1244
MaeII	ACGT	6 cut(s)	281, 347, 370, 401, 558, 986
MaeIII	GTNAC	5 cut(s)	343, 371, 431, 1115, 1155
MalI	GATC	7 cut(s)	702, 888, 909, 963, 1012, 1043, 1356
MbiI	CCGCTC	1 cut(s)	358
MboI	GATC	7 cut(s)	700, 886, 907, 961, 1010, 1041, 1354
MflI	RGATCY	1 cut(s)	1041
MhlI	GDGCHC	4 cut(s)	312, 399, 416, 1483
MlsI	TGGCCA	2 cut(s)	5, 553
MluCI	AATT	3 cut(s)	64, 1259, 1389
MluNI	TGGCCA	2 cut(s)	5, 553
MlyI	GAGTC	3 cut(s)	234, 419, 483
MmeI	TCCRAC	2 cut(s)	947, 1122
Mox20I	TGGCCA	2 cut(s)	5, 553
Mph1103I	ATGCAT	1 cut(s)	1367
MscI	TGGCCA	2 cut(s)	5, 553
MseI	TTAA	5 cut(s)	807, 1175, 1190, 1446, 1513
MslI	CAYNNNNRTG	1 cut(s)	1305
Msp20I	TGGCCA	2 cut(s)	5, 553
MspA1I	CMGCKG	1 cut(s)	263
MspI	CCGG	3 cut(s)	334, 588, 1248
MspR9I	CCNGG	4 cut(s)	529, 739, 928, 1121
MvaI	CCWGG	4 cut(s)	529, 739, 928, 1121
MvnI	CGCG	2 cut(s)	510, 1169
MwoI	GCNNNNNNNGC	6 cut(s)	217, 254, 383, 504, 559, 1478
NcoI	CCATGG	2 cut(s)	6, 1303
NdeI	CATATG	1 cut(s)	538
NdeII	GATC	7 cut(s)	700, 886, 907, 961, 1010, 1041, 1354
NlaIV	GGNNCC	1 cut(s)	526
NmuCI	GTSAC	4 cut(s)	343, 431, 1115, 1155
NsiI	ATGCAT	1 cut(s)	1367
NspI	RCATGY	2 cut(s)	1186, 1369
OliI	CACNNNNGTG	1 cut(s)	1305
PagI	TCATGA	2 cut(s)	408, 993
PauI	GCGCGC	1 cut(s)	1167
PciI	ACATGT	1 cut(s)	1182
PciSI	GCTCTTC	1 cut(s)	1488
PcsI	WCGNNNNNNNCGW	3 cut(s)	117, 129, 441
PfeI	GAWTC	1 cut(s)	170
PfoI	TCCNGGA	1 cut(s)	737
PinAI	ACCGGT	1 cut(s)	587
PkrI	GCNGC	8 cut(s)	14, 17, 186, 250, 385, 509, 649, 1079
Ple19I	CGATCG	1 cut(s)	1357
PleI	GAGTC	3 cut(s)	233, 419, 483
PmaCI	CACGTG	1 cut(s)	402
PmlI	CACGTG	1 cut(s)	402
PpsI	GAGTC	3 cut(s)	233, 419, 483
Ppu21I	YACGTR	1 cut(s)	402
PscI	ACATGT	1 cut(s)	1182
Psp124BI	GAGCTC	2 cut(s)	312, 416
Psp6I	CCWGG	4 cut(s)	527, 737, 926, 1119
PspCI	CACGTG	1 cut(s)	402
PspGI	CCWGG	4 cut(s)	527, 737, 926, 1119
PspN4I	GGNNCC	1 cut(s)	526
PspPI	GGNCC	5 cut(s)	385, 448, 735, 785, 1004
PsrI	GAACNNNNNNTAC	2 cut(s)	931, 963
PsuI	RGATCY	1 cut(s)	1041
PteI	GCGCGC	1 cut(s)	1167
PvuI	CGATCG	1 cut(s)	1357
RsaI	GTAC	5 cut(s)	422, 455, 716, 760, 1343
RsaNI	GTAC	5 cut(s)	421, 454, 715, 759, 1342
RseI	CAYNNNNRTG	1 cut(s)	1305
SacI	GAGCTC	2 cut(s)	312, 416
SapI	GCTCTTC	1 cut(s)	1488
SaqAI	TTAA	5 cut(s)	807, 1175, 1190, 1446, 1513
SatI	GCNGC	8 cut(s)	13, 16, 185, 249, 384, 508, 648, 1078
Sau3AI	GATC	7 cut(s)	700, 886, 907, 961, 1010, 1041, 1354
Sau96I	GGNCC	5 cut(s)	385, 448, 735, 785, 1004
ScaI	AGTACT	1 cut(s)	760
SchI	GAGTC	3 cut(s)	234, 419, 483
ScrFI	CCNGG	4 cut(s)	529, 739, 928, 1121
SduI	GDGCHC	4 cut(s)	312, 399, 416, 1483
SexAI	ACCWGGT	1 cut(s)	1119
SfaNI	GCATC	1 cut(s)	1352
SfcI	CTRYAG	1 cut(s)	616
SinI	GGWCC	4 cut(s)	448, 735, 785, 1004
SmiMI	CAYNNNNRTG	1 cut(s)	1305
SmlI	CTYRAG	2 cut(s)	359, 427
SmoI	CTYRAG	2 cut(s)	359, 427
Sse9I	AATT	3 cut(s)	64, 1259, 1389
SspMI	CTAG	2 cut(s)	882, 1244
SstI	GAGCTC	2 cut(s)	312, 416
StyD4I	CCNGG	4 cut(s)	527, 737, 926, 1119
StyI	CCWWGG	3 cut(s)	6, 1062, 1303
TaaI	ACNGT	5 cut(s)	474, 938, 1073, 1205, 1346
TaiI	ACGT	6 cut(s)	284, 350, 373, 404, 561, 989
TaqI	TCGA	2 cut(s)	479, 840
TaqII	GACCGA	1 cut(s)	1021
TasI	AATT	3 cut(s)	64, 1259, 1389
TatI	WGTACW	2 cut(s)	758, 1341
TauI	GCSGC	5 cut(s)	251, 386, 510, 650, 1080
TfiI	GAWTC	1 cut(s)	170
Tru1I	TTAA	5 cut(s)	807, 1175, 1190, 1446, 1513
Tru9I	TTAA	5 cut(s)	807, 1175, 1190, 1446, 1513
TscAI	CASTG	6 cut(s)	221, 250, 725, 753, 1277, 1351
TseFI	GTSAC	4 cut(s)	343, 431, 1115, 1155
TseI	GCWGC	3 cut(s)	12, 15, 184
Tsp45I	GTSAC	4 cut(s)	343, 431, 1115, 1155
TspDTI	ATGAA	6 cut(s)	180, 397, 589, 982, 1416, 1455
TspGWI	ACGGA	1 cut(s)	1341
TspRI	CASTG	6 cut(s)	221, 250, 725, 753, 1277, 1351
VpaK11BI	GGWCC	4 cut(s)	448, 735, 785, 1004
XceI	RCATGY	2 cut(s)	1186, 1369
XspI	CTAG	2 cut(s)	882, 1244
ZrmI	AGTACT	1 cut(s)	760
Zsp2I	ATGCAT	1 cut(s)	1367

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.