Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0002068

Physical Location & Seq

Genomic Coordinates Reverse (-)

46454082 .. 46459621

Gene Structure 5540 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000009098

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

ATGGAGTCGACTTCCGATAGCTCGATGAAAATCTCGCCGTTGGATCTGATGGCGGCGATCTTCAAGGGCAAGATGGACCCCTCCAACGCCTCCGCTGCCTCCTCTGCCGGCGCCGAGGTCACCTCCGTCATTCTCGAGAATCGTGAGTTCGTTATGATCCTGACGACCTCGATTGCCATTTTGATTGGCTGCGTCGTGGTTTTTGTGTGGCGGCGGTCGAGTGCTCAGAAGCCCAAGGTTGTCCAGCCTCTTAAGCCGTTGGTCATCACGGAGCCTGAACCGGAGCTCGATGATGGAAGCAAGAAGGTCACAATCTTCTTCGGCACGCAAACCGGTACTGCTGAGGGATTTGCCAAGGCTTTGGCTGAGGAAGCGAAAGCTCGCTATGAAAAGGTCACATTCAAAGTTGTTGATTTGGATGATTACGCAGCTGATGACGAGGAATATGAGGAGAAATTGAAAAATGAGAATTTGGCAATTTTCTTCTTGGCCACATATGGTGATGGTGAGCCAACGGATAATGCTGCTAGATTTTACAAGTGGTTTACAGAGGGTAAAGAGAAGGAAGCATGGCTTCAAAATCTTCATTACGGAGTGTTTGGTCTTGGAAACAGGCAGTATGAGCATTTCAATAAGGTGGCCGTGGTTGTGGATGAGATTCTTGCTGCTCAGGGTGGGAAGAGACTCGTTCCAGTGGGCCTTGGAGATGATGATCAATGCATAGAGGATGATTTCACTGCATGGCGAGAGTCAATGTGGCCTGAGTTGGACCAGTTGCTTCGAGATGAGGATGATGCAACCACACCTGCTTGCACACCTTACACTGCCGCTGTCTTGGAGTATCGAGTTGTATTTAATGATGCTGCTGATGCACCAGTAGAGGATAAGAGCTGGAATAATGCAAACGGTCATGCTGTCATTGATGCTCAGCATCCATGCAGGGCTAATGTTGCTGTGAGAAAGGAACTTCATGCTCCTGCATCTGATCGTTCTTGCACCCATCTCGAATTTGATATTGCTGGCACTGGACTTGCATATGAAACTGGTGATCATGTCGGTGTGTACTGTGAGAATCTTTCAGAAACTGTGGAAGAGGCGATAAGTTTGTTGGGCTTGGCTCCGGAAACATACTTCTCGATGCACACTGATAAGGATGATGGTACACCACTTAGCGGAGGCTCCTTGTTACCTCCCTTTCCACCATGCACATTAAGAACAGCACTAACTCGATATGCTGATCTTTTGAGTTCTCCGAAAAAGTCTGCCCTACTGGCTTTAGCTGCCTATGCATCTGATCCAGCTGAAGCGGATCGATTAAGACATCTTGCATCACCTGCTGGGAAGGATGAATATGCTCAATGGATGGTTGCAAGTCAGAGAAGCCTTCTTGAGGTCATGGCTGAATATCCATCAGCCAAGCCCCCACTTGGAGTCTTCTTTGCAGCAGTTGCTCCAAGGTTGCAGCCTAGATACTATTCAATCTCGTCATCCCCGAGGATGGCACCATCTAGAATTCATGTTACTTGTGCACTAGTTTATGACAAAACATCAACAGGAAGGATTCACAAAGGAGTGTGTTCAACCTGGATGAAGAATTCTGTGCCTTCAGCGAAAAGTGATGATTGTAGTTGGGCACCCGTTTTTGTTCGGCTATCAAACTTCAGACTTCCCGTTGATACTAAAGTACCTATTCTTATGATTGGTCCTGGAACTGGATTGGCTCCTTTCAGGGGTTTCCTGCAGGAAAGATTAGCTCTTAAAGAAGATGGAGCAGAACTTGGAACCTCCGTATTATTCTTTGGATGCAGAAATCGTCAAATGGACTACATTTACGAAGATGAGCTGAACAACTTTGTAGAAAAAGGTGCACTTTCTGAGCTTGTGGTTGCATTCTCCCGCCAGGGACCCACCAAGGAATATGTGCAACATAAAATGATGCAGAAGGTTTGCCACCCACTCAAGTCTCTAAGTCTCAACCTCTGCCTACATCCCACAGTTTACAGTTTTTCTTCATTAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003958 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006725 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009698 GO:0009987 GO:0012505 GO:0016491 GO:0016651 GO:0016653 GO:0019748 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0055114 GO:0071704 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_1 Flavodoxin_1 NAD_binding_1

Protein Analysis

674

Amino Acids

74.14

Weight (kDa)

5.13

Isoelectric Point (pI)

40.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Flavodoxin_1	PF00258	105 - 248	1.4e-33	Flavodoxin
FAD_binding_1	PF00667	308 - 529	2.8e-70	FAD binding domain
NAD_binding_1	PF00175	566 - 651	8.9e-11	Oxidoreductase NAD-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002068)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30210 AT4G30210 AT4G30210
fragaria_vesca	FvH4_4g08180
malus_domestica	MD13G1253300.v1.1 MD16G1257600.v1.1
prunus_persica	Prupe.1G085400_v2.0.a1
pyrus_communis	pycom12480g00040 pycom13g22470
rosa_chinensis	RchiOBHm_Chr1g0334331 RchiOBHm_Chr4g0402381 RchiOBHm_Chr4g0402391 RchiOBHm_Chr4g0419591 RchiOBHm_Chr7g0226121
rosa_laevigata	RLG00000009089 RLG00000009093 RLG00000009097 RLG00000009098
rosa_multiflora	Rmu_co8074388.1_g000001 Rmu_sc0002660.1_g000001 Rmu_sc0023635.1_g000001
rosa_roxburghii	Rroxscaffold_1G00022590 Rroxscaffold_5G00347040 Rroxscaffold_5G00347050
rosa_rugosa	Rorug03G0293000 Rorug04G0034500 Rorug04G0034500 Rorug04G0034600 Rorug04G0034700 Rorug04G0034800 Rorug04G0034900 Rorug04G0035000 Rorug05G0246500
rosa_samantha	Rh4AG112500 Rh4AG112600 Rh4BG105000 Rh4BG105100 Rh4CG004400 Rh4CG119300 Rh4CG119400 Rh4DG104000 Rh4DG104100 Rh5AG337100
rosa_wichuraiana	Rw4G009010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	814, 1342
Acc36I	ACCTGC	2 cut(s)	814, 1342
AccB1I	GGYRCC	3 cut(s)	110, 1501, 1633
AccI	GTMKAC	1 cut(s)	8
AccIII	TCCGGA	1 cut(s)	1120
AciI	CCGC	8 cut(s)	53, 93, 211, 214, 828, 1173, 1307, 1897
AclWI	GGATC	4 cut(s)	51, 151, 1289, 1317
AcoI	YGGCCR	2 cut(s)	489, 639
AcsI	RAATTY	4 cut(s)	469, 1007, 1512, 1594
AcuI	CTGAAG	3 cut(s)	1323, 1590, 1645
AcyI	GRCGYC	1 cut(s)	111
AfaI	GTAC	4 cut(s)	337, 1064, 1162, 1686
AfiI	CCNNNNNNNGG	6 cut(s)	1172, 1390, 1427, 1498, 1712, 1730
AflII	CTTAAG	1 cut(s)	251
AgeI	ACCGGT	1 cut(s)	332
AgsI	TTSAA	7 cut(s)	64, 403, 460, 578, 631, 1479, 1581
AhlI	ACTAGT	1 cut(s)	1531
AjnI	CCWGG	3 cut(s)	1583, 1705, 1899
Alw21I	GWGCWC	4 cut(s)	226, 288, 1531, 1870
Alw26I	GTCTC	3 cut(s)	676, 1968, 1976
Alw44I	GTGCAC	2 cut(s)	1527, 1866
AlwI	GGATC	4 cut(s)	51, 151, 1289, 1317
AlwNI	CAGNNNCTG	1 cut(s)	1085
Ama87I	CYCGRG	2 cut(s)	134, 1492
Aor13HI	TCCGGA	1 cut(s)	1120
AoxI	GGCC	4 cut(s)	489, 639, 697, 758
ApaLI	GTGCAC	2 cut(s)	1527, 1866
ApeKI	GCWGC	9 cut(s)	95, 189, 428, 524, 665, 863, 1280, 1442, 1462
ApoI	RAATTY	4 cut(s)	469, 1007, 1512, 1594
AseI	ATTAAT	1 cut(s)	2015
AsiGI	ACCGGT	1 cut(s)	332
AspLEI	GCGC	1 cut(s)	113
AspS9I	GGNCC	5 cut(s)	76, 697, 769, 1703, 1904
AsuHPI	GGTGA	5 cut(s)	112, 512, 518, 1058, 1323
AvaI	CYCGRG	2 cut(s)	134, 1492
AvaII	GGWCC	4 cut(s)	76, 769, 1703, 1904
BaeGI	GKGCMC	3 cut(s)	1531, 1636, 1870
BaeI	ACNNNNGTAYC	4 cut(s)	1668, 1668, 1701, 1701
BalI	TGGCCA	1 cut(s)	491
BanI	GGYRCC	3 cut(s)	110, 1501, 1633
BanII	GRGCYC	1 cut(s)	288
BbsI	GAAGAC	1 cut(s)	1426
Bbv12I	GWGCWC	4 cut(s)	226, 288, 1531, 1870
BbvCI	CCTCAGC	2 cut(s)	342, 366
BbvI	GCAGC	9 cut(s)	82, 176, 440, 511, 652, 850, 1267, 1454, 1474
BceAI	ACGGC	3 cut(s)	22, 241, 626
BcgI	CGANNNNNNTGC	2 cut(s)	985, 1019
BciT130I	CCWGG	3 cut(s)	1585, 1707, 1901
BclI	TGATCA	2 cut(s)	712, 1048
BcoDI	GTCTC	3 cut(s)	676, 1968, 1976
BcuI	ACTAGT	1 cut(s)	1531
BfaI	CTAG	4 cut(s)	528, 1467, 1509, 1532
BfmI	CTRYAG	1 cut(s)	1739
BfoI	RGCGCY	1 cut(s)	114
BfrI	CTTAAG	1 cut(s)	251
BfuAI	ACCTGC	2 cut(s)	814, 1342
BglI	GCCNNNNNGGC	1 cut(s)	1271
BlpI	GCTNAGC	1 cut(s)	927
Bme1390I	CCNGG	3 cut(s)	1585, 1707, 1901
Bme18I	GGWCC	4 cut(s)	76, 769, 1703, 1904
BmeT110I	CYCGRG	2 cut(s)	134, 1492
BmgT120I	GGNCC	5 cut(s)	76, 697, 769, 1703, 1904
BmrFI	CCNGG	3 cut(s)	1585, 1707, 1901
BpiI	GAAGAC	1 cut(s)	1426
BplI	GAGNNNNNCTC	2 cut(s)	107, 139
Bpu10I	CCTNAGC	3 cut(s)	342, 366, 669
Bpu1102I	GCTNAGC	1 cut(s)	927
BpuEI	CTTGAG	2 cut(s)	1409, 1943
Bsa29I	ATCGAT	1 cut(s)	1312
BsaBI	GATNNNNATC	2 cut(s)	29, 711
BsaHI	GRCGYC	1 cut(s)	111
BsaJI	CCNNGG	9 cut(s)	114, 234, 354, 642, 700, 1454, 1493, 1900, 1911
BsaWI	WCCGGW	3 cut(s)	280, 332, 1120
Bsc4I	CCNNNNNNNGG	6 cut(s)	1172, 1390, 1427, 1498, 1712, 1730
Bse118I	RCCGGY	2 cut(s)	107, 332
Bse1I	ACTGG	7 cut(s)	692, 772, 875, 1030, 1048, 1275, 1717
Bse8I	GATNNNNATC	2 cut(s)	29, 711
BseAI	TCCGGA	1 cut(s)	1120
BseBI	CCWGG	3 cut(s)	1585, 1707, 1901
BseCI	ATCGAT	1 cut(s)	1312
BseDI	CCNNGG	9 cut(s)	114, 234, 354, 642, 700, 1454, 1493, 1900, 1911
BseJI	GATNNNNATC	2 cut(s)	29, 711
BseLI	CCNNNNNNNGG	6 cut(s)	1172, 1390, 1427, 1498, 1712, 1730
BseMII	CTCAG	7 cut(s)	239, 333, 357, 683, 753, 941, 1866
BseNI	ACTGG	7 cut(s)	692, 772, 875, 1030, 1048, 1275, 1717
BseRI	GAGGAG	2 cut(s)	91, 464
BseSI	GKGCMC	3 cut(s)	1531, 1636, 1870
BseXI	GCAGC	9 cut(s)	82, 176, 440, 511, 652, 850, 1267, 1454, 1474
BseYI	CCCAGC	1 cut(s)	1337
Bsh1285I	CGRYCG	1 cut(s)	218
BshFI	GGCC	4 cut(s)	491, 641, 699, 760
BshNI	GGYRCC	3 cut(s)	110, 1501, 1633
BshTI	ACCGGT	1 cut(s)	332
BshVI	ATCGAT	1 cut(s)	1312
BsiEI	CGRYCG	1 cut(s)	218
BsiHKAI	GWGCWC	4 cut(s)	226, 288, 1531, 1870
BsiHKCI	CYCGRG	2 cut(s)	134, 1492
BsiSI	CCGG	4 cut(s)	108, 281, 333, 1121
BslFI	GGGAC	1 cut(s)	1917
BslI	CCNNNNNNNGG	6 cut(s)	1172, 1390, 1427, 1498, 1712, 1730
BsmAI	GTCTC	3 cut(s)	676, 1968, 1976
BsmFI	GGGAC	1 cut(s)	1917
BsmI	GAATGC	1 cut(s)	1889
BsnI	GGCC	4 cut(s)	491, 641, 699, 760
BsoBI	CYCGRG	2 cut(s)	134, 1492
Bsp1286I	GDGCHC	5 cut(s)	226, 288, 1531, 1636, 1870
Bsp13I	TCCGGA	1 cut(s)	1120
Bsp143I	GATC	9 cut(s)	43, 57, 156, 712, 985, 1048, 1237, 1294, 1309
Bsp1720I	GCTNAGC	1 cut(s)	927
BspACI	CCGC	8 cut(s)	53, 93, 211, 214, 828, 1173, 1307, 1897
BspANI	GGCC	4 cut(s)	491, 641, 699, 760
BspCNI	CTCAG	7 cut(s)	238, 334, 358, 682, 754, 940, 1867
BspDI	ATCGAT	1 cut(s)	1312
BspEI	TCCGGA	1 cut(s)	1120
BspMAI	CTGCAG	1 cut(s)	1743
BspMI	ACCTGC	2 cut(s)	814, 1342
BspPI	GGATC	4 cut(s)	51, 151, 1289, 1317
BspT107I	GGYRCC	3 cut(s)	110, 1501, 1633
BspTI	CTTAAG	1 cut(s)	251
BsrFI	RCCGGY	2 cut(s)	107, 332
BsrI	ACTGG	7 cut(s)	692, 772, 875, 1030, 1048, 1275, 1717
BssAI	RCCGGY	2 cut(s)	107, 332
BssECI	CCNNGG	9 cut(s)	114, 234, 354, 642, 700, 1454, 1493, 1900, 1911
BssMI	GATC	9 cut(s)	43, 57, 156, 712, 985, 1048, 1237, 1294, 1309
BssNI	GRCGYC	1 cut(s)	111
BssT1I	CCWWGG	5 cut(s)	234, 354, 700, 1454, 1911
Bst2UI	CCWGG	3 cut(s)	1585, 1707, 1901
Bst4CI	ACNGT	5 cut(s)	908, 1067, 1087, 1996, 2003
Bst6I	CTCTTC	2 cut(s)	674, 1086
BstACI	GRCGYC	1 cut(s)	111
BstAFI	CTTAAG	1 cut(s)	251
BstAPI	GCANNNNNTGC	2 cut(s)	1334, 1448
BstC8I	GCNNGC	5 cut(s)	109, 326, 382, 811, 1021
BstDEI	CTNAG	9 cut(s)	225, 342, 366, 669, 762, 927, 1169, 1875, 1967
BstDSI	CCRYGG	1 cut(s)	642
BstEII	GGTNACC	1 cut(s)	118
BstENI	CCTNNNNNAGG	1 cut(s)	1388
BstH2I	RGCGCY	1 cut(s)	114
BstHHI	GCGC	1 cut(s)	113
BstKTI	GATC	9 cut(s)	46, 60, 159, 715, 988, 1051, 1240, 1297, 1312
BstMAI	GTCTC	3 cut(s)	676, 1968, 1976
BstMBI	GATC	9 cut(s)	43, 57, 156, 712, 985, 1048, 1237, 1294, 1309
BstMCI	CGRYCG	1 cut(s)	218
BstNI	CCWGG	3 cut(s)	1585, 1707, 1901
BstPI	GGTNACC	1 cut(s)	118
BstSCI	CCNGG	3 cut(s)	1583, 1705, 1899
BstSFI	CTRYAG	1 cut(s)	1739
BstSLI	GKGCMC	3 cut(s)	1531, 1636, 1870
BstV1I	GCAGC	9 cut(s)	82, 176, 440, 511, 652, 850, 1267, 1454, 1474
BstV2I	GAAGAC	1 cut(s)	1426
BstX2I	RGATCY	1 cut(s)	43
BstXI	CCANNNNNNTGG	1 cut(s)	361
BstYI	RGATCY	1 cut(s)	43
Bsu15I	ATCGAT	1 cut(s)	1312
BsuRI	GGCC	4 cut(s)	491, 641, 699, 760
BsuTUI	ATCGAT	1 cut(s)	1312
BtgI	CCRYGG	1 cut(s)	642
BtsI	GCAGTG	2 cut(s)	735, 822
BtsIMutI	CAGTG	5 cut(s)	699, 735, 822, 1023, 1143
BveI	ACCTGC	2 cut(s)	814, 1342
Cac8I	GCNNGC	5 cut(s)	109, 326, 382, 811, 1021
CaiI	CAGNNNCTG	1 cut(s)	1085
CfoI	GCGC	1 cut(s)	113
Cfr10I	RCCGGY	2 cut(s)	107, 332
Cfr13I	GGNCC	5 cut(s)	76, 697, 769, 1703, 1904
ClaI	ATCGAT	1 cut(s)	1312
CseI	GACGC	1 cut(s)	181
Csp6I	GTAC	4 cut(s)	336, 1063, 1161, 1685
CspAI	ACCGGT	1 cut(s)	332
CviAII	CATG	9 cut(s)	570, 741, 911, 936, 971, 1052, 1203, 1396, 1517
CviQI	GTAC	4 cut(s)	336, 1063, 1161, 1685
DdeI	CTNAG	9 cut(s)	225, 342, 366, 669, 762, 927, 1169, 1875, 1967
DinI	GGCGCC	1 cut(s)	112
DpnI	GATC	9 cut(s)	45, 59, 158, 714, 987, 1050, 1239, 1296, 1311
DpnII	GATC	9 cut(s)	43, 57, 156, 712, 985, 1048, 1237, 1294, 1309
EaeI	YGGCCR	2 cut(s)	489, 639
Eam1104I	CTCTTC	2 cut(s)	674, 1086
EarI	CTCTTC	2 cut(s)	674, 1086
Ecl136II	GAGCTC	1 cut(s)	286
Eco130I	CCWWGG	5 cut(s)	234, 354, 700, 1454, 1911
Eco24I	GRGCYC	1 cut(s)	288
Eco47I	GGWCC	4 cut(s)	76, 769, 1703, 1904
Eco53kI	GAGCTC	1 cut(s)	286
Eco57I	CTGAAG	3 cut(s)	1323, 1590, 1645
Eco88I	CYCGRG	2 cut(s)	134, 1492
Eco91I	GGTNACC	1 cut(s)	118
EcoICRI	GAGCTC	1 cut(s)	286
EcoNI	CCTNNNNNAGG	1 cut(s)	1388
EcoO109I	RGGNCCY	1 cut(s)	1904
EcoO65I	GGTNACC	1 cut(s)	118
EcoRI	GAATTC	2 cut(s)	1512, 1594
EcoRII	CCWGG	3 cut(s)	1583, 1705, 1899
EcoT14I	CCWWGG	5 cut(s)	234, 354, 700, 1454, 1911
EcoT22I	ATGCAT	2 cut(s)	722, 1291
EcoT38I	GRGCYC	1 cut(s)	288
EgeI	GGCGCC	1 cut(s)	112
EheI	GGCGCC	1 cut(s)	112
ErhI	CCWWGG	5 cut(s)	234, 354, 700, 1454, 1911
FaeI	CATG	9 cut(s)	573, 744, 914, 939, 974, 1055, 1206, 1399, 1520
FalI	AAGNNNNNCTT	4 cut(s)	558, 590, 1854, 1886
FaqI	GGGAC	1 cut(s)	1917
FatI	CATG	9 cut(s)	569, 740, 910, 935, 970, 1051, 1202, 1395, 1516
FauI	CCCGC	1 cut(s)	1904
FauNDI	CATATG	2 cut(s)	496, 1036
FbaI	TGATCA	2 cut(s)	712, 1048
FblI	GTMKAC	1 cut(s)	8
FriOI	GRGCYC	1 cut(s)	288
FspBI	CTAG	4 cut(s)	528, 1467, 1509, 1532
GlaI	GCGC	1 cut(s)	112
GsaI	CCCAGC	1 cut(s)	1341
HaeII	RGCGCY	1 cut(s)	114
HaeIII	GGCC	4 cut(s)	491, 641, 699, 760
HapII	CCGG	4 cut(s)	108, 281, 333, 1121
HgaI	GACGC	1 cut(s)	181
HhaI	GCGC	1 cut(s)	113
Hin1I	GRCGYC	1 cut(s)	111
Hin1II	CATG	9 cut(s)	573, 744, 914, 939, 974, 1055, 1206, 1399, 1520
Hin6I	GCGC	1 cut(s)	111
HinP1I	GCGC	1 cut(s)	111
HincII	GTYRAC	1 cut(s)	9
HindII	GTYRAC	1 cut(s)	9
HinfI	GANTC	8 cut(s)	5, 139, 658, 684, 749, 1072, 1431, 1561
HpaII	CCGG	4 cut(s)	108, 281, 333, 1121
HphI	GGTGA	5 cut(s)	112, 512, 518, 1058, 1323
Hpy166II	GTNNAC	7 cut(s)	9, 546, 1063, 1163, 1529, 1868, 1999
Hpy8I	GTNNAC	7 cut(s)	9, 546, 1063, 1163, 1529, 1868, 1999
Hpy99I	CGWCG	1 cut(s)	197
HpyAV	CCTTC	7 cut(s)	298, 556, 1336, 1394, 1551, 1614, 1936
HpyCH4III	ACNGT	5 cut(s)	908, 1067, 1087, 1996, 2003
HpyF3I	CTNAG	9 cut(s)	225, 342, 366, 669, 762, 927, 1169, 1875, 1967
Hsp92I	GRCGYC	1 cut(s)	111
Hsp92II	CATG	9 cut(s)	573, 744, 914, 939, 974, 1055, 1206, 1399, 1520
HspAI	GCGC	1 cut(s)	111
KasI	GGCGCC	1 cut(s)	110
KflI	GGGWCCC	1 cut(s)	1904
Kpn2I	TCCGGA	1 cut(s)	1120
KroI	GCCGGC	1 cut(s)	107
KroNI	GCCGGC	1 cut(s)	109
Ksp22I	TGATCA	2 cut(s)	712, 1048
Kzo9I	GATC	9 cut(s)	43, 57, 156, 712, 985, 1048, 1237, 1294, 1309
LmnI	GCTCC	8 cut(s)	271, 283, 979, 1123, 1184, 1456, 1726, 1769
Lsp1109I	GCAGC	9 cut(s)	82, 176, 440, 511, 652, 850, 1267, 1454, 1474
MaeI	CTAG	4 cut(s)	528, 1467, 1509, 1532
MaeIII	GTNAC	5 cut(s)	118, 307, 394, 1185, 1519
MalI	GATC	9 cut(s)	45, 59, 158, 714, 987, 1050, 1239, 1296, 1311
MboI	GATC	9 cut(s)	43, 57, 156, 712, 985, 1048, 1237, 1294, 1309
MflI	RGATCY	1 cut(s)	43
MhlI	GDGCHC	5 cut(s)	226, 288, 1531, 1636, 1870
MlsI	TGGCCA	1 cut(s)	491
MluCI	AATT	6 cut(s)	455, 469, 477, 1007, 1512, 1594
MluNI	TGGCCA	1 cut(s)	491
Mly113I	GGCGCC	1 cut(s)	111
MlyI	GAGTC	4 cut(s)	14, 678, 758, 1440
MmeI	TCCRAC	3 cut(s)	21, 108, 747
Mox20I	TGGCCA	1 cut(s)	491
Mph1103I	ATGCAT	2 cut(s)	722, 1291
MroI	TCCGGA	1 cut(s)	1120
MroNI	GCCGGC	1 cut(s)	107
MscI	TGGCCA	1 cut(s)	491
MseI	TTAA	6 cut(s)	252, 855, 1211, 1316, 1758, 2015
MslI	CAYNNNNRTG	2 cut(s)	1056, 2017
Msp20I	TGGCCA	1 cut(s)	491
MspA1I	CMGCKG	4 cut(s)	95, 431, 830, 1301
MspCI	CTTAAG	1 cut(s)	251
MspI	CCGG	4 cut(s)	108, 281, 333, 1121
MspR9I	CCNGG	3 cut(s)	1585, 1707, 1901
Mva1269I	GAATGC	1 cut(s)	1889
MvaI	CCWGG	3 cut(s)	1585, 1707, 1901
NaeI	GCCGGC	1 cut(s)	109
NarI	GGCGCC	1 cut(s)	111
NdeI	CATATG	2 cut(s)	496, 1036
NdeII	GATC	9 cut(s)	43, 57, 156, 712, 985, 1048, 1237, 1294, 1309
NgoMIV	GCCGGC	1 cut(s)	107
NlaIII	CATG	9 cut(s)	573, 744, 914, 939, 974, 1055, 1206, 1399, 1520
NmeAIII	GCCGAG	1 cut(s)	139
NmuCI	GTSAC	3 cut(s)	118, 307, 394
NsiI	ATGCAT	2 cut(s)	722, 1291
PaeR7I	CTCGAG	1 cut(s)	134
PaqCI	CACCTGC	2 cut(s)	814, 1342
PcsI	WCGNNNNNNNCGW	1 cut(s)	1490
PctI	GAATGC	1 cut(s)	1889
PdiI	GCCGGC	1 cut(s)	109
PfeI	GAWTC	4 cut(s)	139, 658, 1072, 1561
PfoI	TCCNGGA	1 cut(s)	1705
PinAI	ACCGGT	1 cut(s)	332
PleI	GAGTC	4 cut(s)	13, 678, 757, 1439
PluTI	GGCGCC	1 cut(s)	114
PpsI	GAGTC	4 cut(s)	13, 678, 757, 1439
PpuMI	RGGWCCY	1 cut(s)	1904
PshBI	ATTAAT	1 cut(s)	2015
Psp124BI	GAGCTC	1 cut(s)	288
Psp5II	RGGWCCY	1 cut(s)	1904
Psp6I	CCWGG	3 cut(s)	1583, 1705, 1899
PspEI	GGTNACC	1 cut(s)	118
PspFI	CCCAGC	1 cut(s)	1337
PspGI	CCWGG	3 cut(s)	1583, 1705, 1899
PspPI	GGNCC	5 cut(s)	76, 697, 769, 1703, 1904
PspPPI	RGGWCCY	1 cut(s)	1904
PstI	CTGCAG	1 cut(s)	1743
PstNI	CAGNNNCTG	1 cut(s)	1085
PsuI	RGATCY	1 cut(s)	43
PvuII	CAGCTG	2 cut(s)	431, 1301
RsaI	GTAC	4 cut(s)	337, 1064, 1162, 1686
RsaNI	GTAC	4 cut(s)	336, 1063, 1161, 1685
RseI	CAYNNNNRTG	2 cut(s)	1056, 2017
SacI	GAGCTC	1 cut(s)	288
SalI	GTCGAC	1 cut(s)	7
SaqAI	TTAA	6 cut(s)	252, 855, 1211, 1316, 1758, 2015
Sau3AI	GATC	9 cut(s)	43, 57, 156, 712, 985, 1048, 1237, 1294, 1309
Sau96I	GGNCC	5 cut(s)	76, 697, 769, 1703, 1904
SbfI	CCTGCAGG	1 cut(s)	1743
SchI	GAGTC	4 cut(s)	14, 678, 758, 1440
ScrFI	CCNGG	3 cut(s)	1585, 1707, 1901
SdaI	CCTGCAGG	1 cut(s)	1743
SduI	GDGCHC	5 cut(s)	226, 288, 1531, 1636, 1870
SfcI	CTRYAG	1 cut(s)	1739
SfoI	GGCGCC	1 cut(s)	112
Sfr274I	CTCGAG	1 cut(s)	134
SinI	GGWCC	4 cut(s)	76, 769, 1703, 1904
SlaI	CTCGAG	1 cut(s)	134
SmiMI	CAYNNNNRTG	2 cut(s)	1056, 2017
SmlI	CTYRAG	4 cut(s)	134, 251, 1388, 1958
SmoI	CTYRAG	4 cut(s)	134, 251, 1388, 1958
SpeI	ACTAGT	1 cut(s)	1531
Sse8387I	CCTGCAGG	1 cut(s)	1743
Sse9I	AATT	6 cut(s)	455, 469, 477, 1007, 1512, 1594
SsiI	CCGC	8 cut(s)	53, 93, 211, 214, 828, 1173, 1307, 1897
SspDI	GGCGCC	1 cut(s)	110
SspMI	CTAG	4 cut(s)	528, 1467, 1509, 1532
SstI	GAGCTC	1 cut(s)	288
StyD4I	CCNGG	3 cut(s)	1583, 1705, 1899
StyI	CCWWGG	5 cut(s)	234, 354, 700, 1454, 1911
TaaI	ACNGT	5 cut(s)	908, 1067, 1087, 1996, 2003
TasI	AATT	6 cut(s)	455, 469, 477, 1007, 1512, 1594
TatI	WGTACW	1 cut(s)	1062
TauI	GCSGC	3 cut(s)	56, 214, 830
TfiI	GAWTC	4 cut(s)	139, 658, 1072, 1561
Tru1I	TTAA	6 cut(s)	252, 855, 1211, 1316, 1758, 2015
Tru9I	TTAA	6 cut(s)	252, 855, 1211, 1316, 1758, 2015
TscAI	CASTG	5 cut(s)	699, 742, 829, 1030, 1150
TseFI	GTSAC	3 cut(s)	118, 307, 394
TseI	GCWGC	9 cut(s)	95, 189, 428, 524, 665, 863, 1280, 1442, 1462
Tsp45I	GTSAC	3 cut(s)	118, 307, 394
TspDTI	ATGAA	9 cut(s)	41, 402, 575, 959, 1053, 1362, 1505, 1604, 2001
TspGWI	ACGGA	5 cut(s)	115, 284, 530, 606, 1777
TspRI	CASTG	5 cut(s)	699, 742, 829, 1030, 1150
Vha464I	CTTAAG	1 cut(s)	251
VneI	GTGCAC	2 cut(s)	1527, 1866
VpaK11BI	GGWCC	4 cut(s)	76, 769, 1703, 1904
VspI	ATTAAT	1 cut(s)	2015
XagI	CCTNNNNNAGG	1 cut(s)	1388
XapI	RAATTY	4 cut(s)	469, 1007, 1512, 1594
XbaI	TCTAGA	1 cut(s)	1508
XhoI	CTCGAG	1 cut(s)	134
XmiI	GTMKAC	1 cut(s)	8
XspI	CTAG	4 cut(s)	528, 1467, 1509, 1532
Zsp2I	ATGCAT	2 cut(s)	722, 1291

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.