Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002068

Physical Location & Seq

Genomic Coordinates Forward (+)

20936192 .. 20942040

Gene Structure 5849 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ37420

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGGACCCCTCCAACGCCTCCGCCGAGGTCACCTCCGTCATTCTCGACAATCGCCACTTCGTTATGATCCTCACGACCTCGATTGCCGTTTTGATCGGCTGCGTCGTCGTTTTTGTGTGGCGGCGATCGAGCGCTCAGAAGCCCAGGGTCGTCCAGCCTCTTAAGCCGTTGATCATCGCGGAGCCTGAGCCGGAGCTCGACGATGGAAGCAAGAAGGTCACAATCTTCTTCGGCACGCAAACCGGTACTGCCGAGGGATTTGCCAAGGCTTTTGCTGAAGAAGCGAAAGCTCGCTATGAGAAGGTCACATTCAAAGTTGTTGATTTGGATGATTATGCGGCTGATGACGAGGCCTATGAGGAGAAATTGAAAAATGAGAGTCTGGCAATTTTCTTTTTGGCGACATATGGTGATGGTGAGCCGACGGATAATGCTGCTAGATTTTACAAGTGGTTTACAGAGGGTAAAGAGAAGGAAGCATGGCTTCAAAATCTTCATTACGGAGTGTTTGGTCTTGGAAACAGGCAGTATGAGCATTTCAACAAGGTGGCCGTGGTTGTGGATGAGTTCCTCGCTGCTCAGGGTGGGAAGCGACTTGTTCCAGTGGGCCTTGGAGATGATGATCAATGCATAGAGGATGATTTCACTGCATGGCGAGAGTTGATGTGGCCTGAGTTGGACCAGTTGCTTCGCGATGAGGATGATGCAACCACACCTGCTTGCACACCTTACACTGCTGCTGTCTTGGAGTATCGAGTTGTATTTAATGATGCTGCTGATGTATCAGTAGAGGATAAGAGCTGGAATACTGCAAATGGTCATGCTGTTATTGATGCTCAGCATCCATGCAGGGCTAATGTTGCTGTGAGAAAGGAACTTCATACTCCTGCATCTGATCGTTCTTGCACCCATCTCGAATTTGATATTGCTGGCACTGGACTTGCATACGAAACTGGTGATCATGTCGGTGTGTACTGTGAGAATCTTTCTGAAACTGTGGAAGAGGCAATAAGTTTGTTGGGCTTGGCACCGGAAACATACTTCTCGATGCACACTGATAAGGATGATGGTACACCACTTAGTGGAGGCTCGTTGTTGCCTCCCTTTCCACCGTGCACATTAAGAACAGCACTAACTCGATATGTTGATCTTTTGAGTTCTCCGAAAAAGGCTGGCCTCTATTTTTTGTATGGTTGGTTCATAGTTTATCTTCTTTTTACTATTCTAATGGAAAGTTTGGGTAACCTTTTGGCTCTTATCATTTTCCAGTCTGCCCTGCTGGCTTTAGCTGCCTATGCATCTGATCCAGCTGAAGCGGATCGATTAAGACATCTTGCATCACCTGCTGGGAAGGATGAATATGCTCAGTGGATGGTTGTGAGTCAGAGAAGCCTTCTTGAGGTCATGGCTGAATTTCCATCAGCCAAGCCCCCACTTGGAGTCTTCTTTGCAGCAGTTGCTCCAAGGTTGCAGCCTAGATACTATTCAATTTCGTCATCCCCGAGGATGGCACCTTCTAGAATTCATGTTACTTGTGCACTAGTTTATGACAAAACATCAACAGGAAGGATTCACAAAGGAGTGTGTTCAACCTGGATGAAGAATTCTGTGCCTTCCGCAAAAAGTGATGATTGTAGTTGGGCACCCGTTTTTGTTCGGCAATCAAACTTCAGACTTCCCGTTGATACTGAAGTACCTATTCTTATGATTGGTCCTGGAACTGGATTGGCTCCTTTCAGGGGTTTCCTGCAGGAAAGATTAGCTCTTAAAGAAGATGGAGCAGAACTTGGACCCTCCATATTATTCTTTGGATGCAGAAATAGTCAAATGGACTACATTTATGAAGATGAGCTGAACAACTTTGTAGAAAAAGGTGCACTTTCTGAGCTTGTGGTTGTGTTCTCCCGCCAGGGACCCACTAAGGAATATGTGCAACATAAAATGATGCAGAAGGCTTCAGACATCTGGAACATGCTATCTCAGGGAGGTTATATTTACGTTTGTGGTGATGCTAAGGGCATGGCCAGGGATGTCCACCGGACTCTTCACACAATCGTGCAGGAGCAGGGATCTCTGGACAGCTCCAAAGCTGAGAGCATGGTGAAAAATCTGCAAATGAATGGCAGGTATTTGCGTGATGTGTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003958 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006725 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009698 GO:0009987 GO:0012505 GO:0016491 GO:0016651 GO:0016653 GO:0019748 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0055114 GO:0071704 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_1 Flavodoxin_1 NAD_binding_1

Protein Analysis

715

Amino Acids

79.46

Weight (kDa)

5.06

Isoelectric Point (pI)

38.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Flavodoxin_1	PF00258	75 - 218	2.7e-32	Flavodoxin
FAD_binding_1	PF00667	278 - 396	1.4e-28	FAD binding domain
FAD_binding_1	PF00667	424 - 532	5.8e-35	FAD binding domain
NAD_binding_1	PF00175	569 - 679	6.8e-16	Oxidoreductase NAD-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002068)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30210 AT4G30210 AT4G30210
fragaria_vesca	FvH4_4g08180
malus_domestica	MD13G1253300.v1.1 MD16G1257600.v1.1
prunus_persica	Prupe.1G085400_v2.0.a1
pyrus_communis	pycom12480g00040 pycom13g22470
rosa_chinensis	RchiOBHm_Chr1g0334331 RchiOBHm_Chr4g0402381 RchiOBHm_Chr4g0402391 RchiOBHm_Chr4g0419591 RchiOBHm_Chr7g0226121
rosa_laevigata	RLG00000009089 RLG00000009093 RLG00000009097 RLG00000009098
rosa_multiflora	Rmu_co8074388.1_g000001 Rmu_sc0002660.1_g000001 Rmu_sc0023635.1_g000001
rosa_roxburghii	Rroxscaffold_1G00022590 Rroxscaffold_5G00347040 Rroxscaffold_5G00347050
rosa_rugosa	Rorug03G0293000 Rorug04G0034500 Rorug04G0034500 Rorug04G0034600 Rorug04G0034700 Rorug04G0034800 Rorug04G0034900 Rorug04G0035000 Rorug05G0246500
rosa_samantha	Rh4AG112500 Rh4AG112600 Rh4BG105000 Rh4BG105100 Rh4CG004400 Rh4CG119300 Rh4CG119400 Rh4DG104000 Rh4DG104100 Rh5AG337100
rosa_wichuraiana	Rw4G009010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	724, 1351
Acc36I	ACCTGC	3 cut(s)	724, 1351, 2115
AccB1I	GGYRCC	3 cut(s)	1027, 1510, 1642
AccB7I	CCANNNNNTGG	1 cut(s)	1082
AccII	CGCG	2 cut(s)	179, 693
AciI	CCGC	7 cut(s)	21, 121, 179, 338, 1316, 1617, 1906
AclWI	GGATC	4 cut(s)	61, 1298, 1326, 2077
AcoI	YGGCCR	2 cut(s)	549, 2022
AcsI	RAATTY	4 cut(s)	917, 1412, 1521, 1603
AcuI	CTGAAG	5 cut(s)	297, 1332, 1654, 1710, 1941
AdeI	CACNNNGTG	1 cut(s)	1082
AfaI	GTAC	4 cut(s)	247, 974, 1072, 1695
AfeI	AGCGCT	1 cut(s)	133
AfiI	CCNNNNNNNGG	6 cut(s)	1082, 1399, 1436, 1507, 1721, 1739
AflII	CTTAAG	1 cut(s)	161
AgeI	ACCGGT	1 cut(s)	242
AgsI	TTSAA	6 cut(s)	313, 370, 488, 541, 1488, 1590
AhlI	ACTAGT	1 cut(s)	1540
AjnI	CCWGG	5 cut(s)	143, 1592, 1714, 1908, 2024
AleI	CACNNNNGTG	1 cut(s)	2054
Alw21I	GWGCWC	4 cut(s)	198, 1118, 1540, 1879
Alw44I	GTGCAC	3 cut(s)	1114, 1536, 1875
AlwI	GGATC	4 cut(s)	61, 1298, 1326, 2077
Ama87I	CYCGRG	1 cut(s)	1501
Aor51HI	AGCGCT	1 cut(s)	133
AoxI	GGCC	6 cut(s)	351, 549, 607, 668, 1174, 2022
ApaLI	GTGCAC	3 cut(s)	1114, 1536, 1875
ApeKI	GCWGC	8 cut(s)	99, 434, 575, 737, 773, 1289, 1451, 1471
ApoI	RAATTY	4 cut(s)	917, 1412, 1521, 1603
AsiGI	ACCGGT	1 cut(s)	242
AspLEI	GCGC	1 cut(s)	134
AspS9I	GGNCC	6 cut(s)	4, 607, 679, 1712, 1790, 1913
AsuHPI	GGTGA	7 cut(s)	22, 422, 428, 968, 1332, 2018, 2113
AvaI	CYCGRG	1 cut(s)	1501
AvaII	GGWCC	5 cut(s)	4, 679, 1712, 1790, 1913
BaeGI	GKGCMC	4 cut(s)	1118, 1540, 1645, 1879
BaeI	ACNNNNGTAYC	4 cut(s)	1677, 1677, 1710, 1710
BalI	TGGCCA	1 cut(s)	2024
BanI	GGYRCC	3 cut(s)	1027, 1510, 1642
BanII	GRGCYC	1 cut(s)	198
BbsI	GAAGAC	1 cut(s)	1435
Bbv12I	GWGCWC	4 cut(s)	198, 1118, 1540, 1879
BbvI	GCAGC	8 cut(s)	86, 421, 562, 724, 760, 1276, 1463, 1483
BccI	CCATC	8 cut(s)	197, 407, 918, 1061, 1366, 1426, 1501, 1769
BceAI	ACGGC	3 cut(s)	71, 151, 536
BcgI	CGANNNNNNTGC	4 cut(s)	242, 276, 895, 929
BciT130I	CCWGG	5 cut(s)	145, 1594, 1716, 1910, 2026
BclI	TGATCA	3 cut(s)	171, 622, 958
BcuI	ACTAGT	1 cut(s)	1540
BfaI	CTAG	4 cut(s)	438, 1476, 1518, 1541
BfmI	CTRYAG	1 cut(s)	1748
BfoI	RGCGCY	1 cut(s)	135
BfrI	CTTAAG	1 cut(s)	161
BfuAI	ACCTGC	3 cut(s)	724, 1351, 2115
BglI	GCCNNNNNGGC	1 cut(s)	1280
BlpI	GCTNAGC	1 cut(s)	837
Bme1390I	CCNGG	5 cut(s)	145, 1594, 1716, 1910, 2026
Bme18I	GGWCC	5 cut(s)	4, 679, 1712, 1790, 1913
BmeT110I	CYCGRG	1 cut(s)	1501
BmgT120I	GGNCC	6 cut(s)	4, 607, 679, 1712, 1790, 1913
BmiI	GGNNCC	9 cut(s)	6, 183, 1029, 1512, 1644, 1731, 1792, 1914, 1915
BmrFI	CCNGG	5 cut(s)	145, 1594, 1716, 1910, 2026
BpiI	GAAGAC	1 cut(s)	1435
BplI	GAGNNNNNCTC	2 cut(s)	17, 49
Bpu10I	CCTNAGC	3 cut(s)	186, 579, 2013
Bpu1102I	GCTNAGC	1 cut(s)	837
BpuEI	CTTGAG	1 cut(s)	1418
Bsa29I	ATCGAT	1 cut(s)	1321
BsaBI	GATNNNNATC	1 cut(s)	621
BsaWI	WCCGGW	3 cut(s)	242, 1030, 2037
Bsc4I	CCNNNNNNNGG	6 cut(s)	1082, 1399, 1436, 1507, 1721, 1739
Bse118I	RCCGGY	1 cut(s)	242
Bse1I	ACTGG	6 cut(s)	602, 682, 940, 958, 1267, 1726
Bse8I	GATNNNNATC	1 cut(s)	621
BseBI	CCWGG	5 cut(s)	145, 1594, 1716, 1910, 2026
BseCI	ATCGAT	1 cut(s)	1321
BseJI	GATNNNNATC	1 cut(s)	621
BseLI	CCNNNNNNNGG	6 cut(s)	1082, 1399, 1436, 1507, 1721, 1739
BseMII	CTCAG	9 cut(s)	149, 177, 593, 663, 851, 1379, 1875, 1994, 2082
BseNI	ACTGG	6 cut(s)	602, 682, 940, 958, 1267, 1726
BseRI	GAGGAG	1 cut(s)	374
BseSI	GKGCMC	4 cut(s)	1118, 1540, 1645, 1879
BseXI	GCAGC	8 cut(s)	86, 421, 562, 724, 760, 1276, 1463, 1483
BseYI	CCCAGC	1 cut(s)	1346
BsgI	GTGCAG	1 cut(s)	2078
Bsh1236I	CGCG	2 cut(s)	179, 693
Bsh1285I	CGRYCG	1 cut(s)	128
BshFI	GGCC	6 cut(s)	353, 551, 609, 670, 1176, 2024
BshNI	GGYRCC	3 cut(s)	1027, 1510, 1642
BshTI	ACCGGT	1 cut(s)	242
BshVI	ATCGAT	1 cut(s)	1321
BsiEI	CGRYCG	1 cut(s)	128
BsiHKAI	GWGCWC	4 cut(s)	198, 1118, 1540, 1879
BsiHKCI	CYCGRG	1 cut(s)	1501
BsiSI	CCGG	4 cut(s)	191, 243, 1031, 2038
BslFI	GGGAC	1 cut(s)	1926
BslI	CCNNNNNNNGG	6 cut(s)	1082, 1399, 1436, 1507, 1721, 1739
BsmFI	GGGAC	1 cut(s)	1926
BsnI	GGCC	6 cut(s)	353, 551, 609, 670, 1176, 2024
BsoBI	CYCGRG	1 cut(s)	1501
Bsp1286I	GDGCHC	5 cut(s)	198, 1118, 1540, 1645, 1879
Bsp1720I	GCTNAGC	1 cut(s)	837
Bsp68I	TCGCGA	1 cut(s)	693
BspACI	CCGC	7 cut(s)	21, 121, 179, 338, 1316, 1617, 1906
BspANI	GGCC	6 cut(s)	353, 551, 609, 670, 1176, 2024
BspCNI	CTCAG	9 cut(s)	148, 178, 592, 664, 850, 1378, 1876, 1993, 2083
BspDI	ATCGAT	1 cut(s)	1321
BspFNI	CGCG	2 cut(s)	179, 693
BspLI	GGNNCC	9 cut(s)	6, 183, 1029, 1512, 1644, 1731, 1792, 1914, 1915
BspMAI	CTGCAG	1 cut(s)	1752
BspMI	ACCTGC	3 cut(s)	724, 1351, 2115
BspPI	GGATC	4 cut(s)	61, 1298, 1326, 2077
BspT107I	GGYRCC	3 cut(s)	1027, 1510, 1642
BspTI	CTTAAG	1 cut(s)	161
BsrFI	RCCGGY	1 cut(s)	242
BsrI	ACTGG	6 cut(s)	602, 682, 940, 958, 1267, 1726
BssAI	RCCGGY	1 cut(s)	242
BssT1I	CCWWGG	3 cut(s)	264, 610, 1463
Bst2UI	CCWGG	5 cut(s)	145, 1594, 1716, 1910, 2026
Bst4CI	ACNGT	3 cut(s)	977, 997, 1113
Bst6I	CTCTTC	2 cut(s)	996, 2049
BstAFI	CTTAAG	1 cut(s)	161
BstAPI	GCANNNNNTGC	2 cut(s)	1343, 1457
BstC8I	GCNNGC	6 cut(s)	236, 292, 721, 931, 1174, 1281
BstDSI	CCRYGG	1 cut(s)	552
BstEII	GGTNACC	2 cut(s)	28, 1241
BstENI	CCTNNNNNAGG	1 cut(s)	1397
BstFNI	CGCG	2 cut(s)	179, 693
BstH2I	RGCGCY	1 cut(s)	135
BstHHI	GCGC	1 cut(s)	134
BstMCI	CGRYCG	1 cut(s)	128
BstMWI	GCNNNNNNNGC	9 cut(s)	163, 281, 532, 860, 1280, 1289, 1295, 1343, 1457
BstNI	CCWGG	5 cut(s)	145, 1594, 1716, 1910, 2026
BstNSI	RCATGY	1 cut(s)	1975
BstPI	GGTNACC	2 cut(s)	28, 1241
BstSCI	CCNGG	5 cut(s)	143, 1592, 1714, 1908, 2024
BstSFI	CTRYAG	1 cut(s)	1748
BstSLI	GKGCMC	4 cut(s)	1118, 1540, 1645, 1879
BstUI	CGCG	2 cut(s)	179, 693
BstV1I	GCAGC	8 cut(s)	86, 421, 562, 724, 760, 1276, 1463, 1483
BstV2I	GAAGAC	1 cut(s)	1435
BstX2I	RGATCY	1 cut(s)	2069
BstYI	RGATCY	1 cut(s)	2069
Bsu15I	ATCGAT	1 cut(s)	1321
BsuRI	GGCC	6 cut(s)	353, 551, 609, 670, 1176, 2024
BsuTUI	ATCGAT	1 cut(s)	1321
BtgI	CCRYGG	1 cut(s)	552
BtgZI	GCGATG	2 cut(s)	160, 708
BtsI	GCAGTG	2 cut(s)	645, 732
BtsIMutI	CAGTG	6 cut(s)	609, 645, 732, 933, 1053, 1373
BtuMI	TCGCGA	1 cut(s)	693
BveI	ACCTGC	3 cut(s)	724, 1351, 2115
Cac8I	GCNNGC	6 cut(s)	236, 292, 721, 931, 1174, 1281
CfoI	GCGC	1 cut(s)	134
Cfr10I	RCCGGY	1 cut(s)	242
Cfr13I	GGNCC	6 cut(s)	4, 607, 679, 1712, 1790, 1913
ClaI	ATCGAT	1 cut(s)	1321
CseI	GACGC	1 cut(s)	91
Csp6I	GTAC	4 cut(s)	246, 973, 1071, 1694
CspAI	ACCGGT	1 cut(s)	242
CviQI	GTAC	4 cut(s)	246, 973, 1071, 1694
DraIII	CACNNNGTG	1 cut(s)	1082
EaeI	YGGCCR	2 cut(s)	549, 2022
Eam1104I	CTCTTC	2 cut(s)	996, 2049
EarI	CTCTTC	2 cut(s)	996, 2049
EciI	GGCGGA	1 cut(s)	10
Ecl136II	GAGCTC	1 cut(s)	196
Eco130I	CCWWGG	3 cut(s)	264, 610, 1463
Eco147I	AGGCCT	1 cut(s)	353
Eco24I	GRGCYC	1 cut(s)	198
Eco47I	GGWCC	5 cut(s)	4, 679, 1712, 1790, 1913
Eco47III	AGCGCT	1 cut(s)	133
Eco53kI	GAGCTC	1 cut(s)	196
Eco57I	CTGAAG	5 cut(s)	297, 1332, 1654, 1710, 1941
Eco88I	CYCGRG	1 cut(s)	1501
Eco91I	GGTNACC	2 cut(s)	28, 1241
EcoICRI	GAGCTC	1 cut(s)	196
EcoNI	CCTNNNNNAGG	1 cut(s)	1397
EcoO109I	RGGNCCY	1 cut(s)	1913
EcoO65I	GGTNACC	2 cut(s)	28, 1241
EcoRI	GAATTC	2 cut(s)	1521, 1603
EcoRII	CCWGG	5 cut(s)	143, 1592, 1714, 1908, 2024
EcoT14I	CCWWGG	3 cut(s)	264, 610, 1463
EcoT22I	ATGCAT	2 cut(s)	632, 1300
EcoT38I	GRGCYC	1 cut(s)	198
ErhI	CCWWGG	3 cut(s)	264, 610, 1463
FalI	AAGNNNNNCTT	4 cut(s)	468, 500, 1863, 1895
FaqI	GGGAC	1 cut(s)	1926
FauI	CCCGC	1 cut(s)	1913
FauNDI	CATATG	1 cut(s)	406
FbaI	TGATCA	3 cut(s)	171, 622, 958
FriOI	GRGCYC	1 cut(s)	198
FspBI	CTAG	4 cut(s)	438, 1476, 1518, 1541
GlaI	GCGC	1 cut(s)	133
GsaI	CCCAGC	1 cut(s)	1350
HaeII	RGCGCY	1 cut(s)	135
HaeIII	GGCC	6 cut(s)	353, 551, 609, 670, 1176, 2024
HapII	CCGG	4 cut(s)	191, 243, 1031, 2038
HgaI	GACGC	1 cut(s)	91
HhaI	GCGC	1 cut(s)	134
Hin6I	GCGC	1 cut(s)	132
HinP1I	GCGC	1 cut(s)	132
HinfI	GANTC	6 cut(s)	379, 982, 1381, 1440, 1570, 2041
HpaII	CCGG	4 cut(s)	191, 243, 1031, 2038
HphI	GGTGA	7 cut(s)	22, 422, 428, 968, 1332, 2018, 2113
Hpy166II	GTNNAC	7 cut(s)	456, 973, 1073, 1116, 1538, 1877, 2035
Hpy188I	TCNGA	9 cut(s)	138, 895, 991, 1164, 1303, 1386, 1673, 1885, 1960
Hpy188III	TCNNGA	9 cut(s)	44, 73, 692, 914, 1045, 1397, 1518, 1966, 2075
Hpy8I	GTNNAC	7 cut(s)	456, 973, 1073, 1116, 1538, 1877, 2035
Hpy99I	CGWCG	4 cut(s)	107, 110, 203, 427
HpyAV	CCTTC	9 cut(s)	208, 295, 466, 1345, 1403, 1524, 1560, 1623, 1945
HpyCH4III	ACNGT	3 cut(s)	977, 997, 1113
HpyCH4IV	ACGT	1 cut(s)	1998
HpyF10VI	GCNNNNNNNGC	9 cut(s)	163, 281, 532, 860, 1280, 1289, 1295, 1343, 1457
HpySE526I	ACGT	1 cut(s)	1998
HspAI	GCGC	1 cut(s)	132
KflI	GGGWCCC	1 cut(s)	1913
Ksp22I	TGATCA	3 cut(s)	171, 622, 958
LmnI	GCTCC	7 cut(s)	181, 193, 1465, 1735, 1778, 2062, 2087
Lsp1109I	GCAGC	8 cut(s)	86, 421, 562, 724, 760, 1276, 1463, 1483
MaeI	CTAG	4 cut(s)	438, 1476, 1518, 1541
MaeII	ACGT	1 cut(s)	1998
MaeIII	GTNAC	5 cut(s)	28, 217, 304, 1241, 1528
MflI	RGATCY	1 cut(s)	2069
MhlI	GDGCHC	5 cut(s)	198, 1118, 1540, 1645, 1879
MlsI	TGGCCA	1 cut(s)	2024
MluCI	AATT	7 cut(s)	365, 387, 917, 1412, 1488, 1521, 1603
MluNI	TGGCCA	1 cut(s)	2024
MlyI	GAGTC	4 cut(s)	388, 1390, 1449, 2035
MmeI	TCCRAC	2 cut(s)	36, 657
Mox20I	TGGCCA	1 cut(s)	2024
Mph1103I	ATGCAT	2 cut(s)	632, 1300
MscI	TGGCCA	1 cut(s)	2024
MseI	TTAA	5 cut(s)	162, 765, 1121, 1325, 1767
MslI	CAYNNNNRTG	2 cut(s)	966, 2054
Msp20I	TGGCCA	1 cut(s)	2024
MspA1I	CMGCKG	1 cut(s)	1310
MspCI	CTTAAG	1 cut(s)	161
MspI	CCGG	4 cut(s)	191, 243, 1031, 2038
MspR9I	CCNGG	5 cut(s)	145, 1594, 1716, 1910, 2026
MvaI	CCWGG	5 cut(s)	145, 1594, 1716, 1910, 2026
MvnI	CGCG	2 cut(s)	179, 693
MwoI	GCNNNNNNNGC	9 cut(s)	163, 281, 532, 860, 1280, 1289, 1295, 1343, 1457
NdeI	CATATG	1 cut(s)	406
NlaIV	GGNNCC	9 cut(s)	6, 183, 1029, 1512, 1644, 1731, 1792, 1914, 1915
NmeAIII	GCCGAG	2 cut(s)	49, 277
NmuCI	GTSAC	3 cut(s)	28, 217, 304
NruI	TCGCGA	1 cut(s)	693
NsiI	ATGCAT	2 cut(s)	632, 1300
NspI	RCATGY	1 cut(s)	1975
OliI	CACNNNNGTG	1 cut(s)	2054
PaqCI	CACCTGC	2 cut(s)	724, 1351
PasI	CCCWGGG	1 cut(s)	144
PceI	AGGCCT	1 cut(s)	353
PcsI	WCGNNNNNNNCGW	3 cut(s)	21, 102, 1499
PfeI	GAWTC	2 cut(s)	982, 1570
PflMI	CCANNNNNTGG	1 cut(s)	1082
PfoI	TCCNGGA	1 cut(s)	1714
PinAI	ACCGGT	1 cut(s)	242
Ple19I	CGATCG	1 cut(s)	128
PleI	GAGTC	4 cut(s)	387, 1389, 1448, 2035
PpsI	GAGTC	4 cut(s)	387, 1389, 1448, 2035
PpuMI	RGGWCCY	1 cut(s)	1913
Psp124BI	GAGCTC	1 cut(s)	198
Psp5II	RGGWCCY	1 cut(s)	1913
Psp6I	CCWGG	5 cut(s)	143, 1592, 1714, 1908, 2024
PspEI	GGTNACC	2 cut(s)	28, 1241
PspFI	CCCAGC	1 cut(s)	1346
PspGI	CCWGG	5 cut(s)	143, 1592, 1714, 1908, 2024
PspN4I	GGNNCC	9 cut(s)	6, 183, 1029, 1512, 1644, 1731, 1792, 1914, 1915
PspPI	GGNCC	6 cut(s)	4, 607, 679, 1712, 1790, 1913
PspPPI	RGGWCCY	1 cut(s)	1913
PsrI	GAACNNNNNNTAC	2 cut(s)	1181, 1213
PstI	CTGCAG	1 cut(s)	1752
PsuI	RGATCY	1 cut(s)	2069
PvuI	CGATCG	1 cut(s)	128
PvuII	CAGCTG	1 cut(s)	1310
RruI	TCGCGA	1 cut(s)	693
RsaI	GTAC	4 cut(s)	247, 974, 1072, 1695
RsaNI	GTAC	4 cut(s)	246, 973, 1071, 1694
RseI	CAYNNNNRTG	2 cut(s)	966, 2054
SacI	GAGCTC	1 cut(s)	198
SaqAI	TTAA	5 cut(s)	162, 765, 1121, 1325, 1767
Sau96I	GGNCC	6 cut(s)	4, 607, 679, 1712, 1790, 1913
SbfI	CCTGCAGG	1 cut(s)	1752
SchI	GAGTC	4 cut(s)	388, 1390, 1449, 2035
ScrFI	CCNGG	5 cut(s)	145, 1594, 1716, 1910, 2026
SdaI	CCTGCAGG	1 cut(s)	1752
SduI	GDGCHC	5 cut(s)	198, 1118, 1540, 1645, 1879
SfcI	CTRYAG	1 cut(s)	1748
SinI	GGWCC	5 cut(s)	4, 679, 1712, 1790, 1913
SmiMI	CAYNNNNRTG	2 cut(s)	966, 2054
SmlI	CTYRAG	2 cut(s)	161, 1397
SmoI	CTYRAG	2 cut(s)	161, 1397
SpeI	ACTAGT	1 cut(s)	1540
Sse8387I	CCTGCAGG	1 cut(s)	1752
Sse9I	AATT	7 cut(s)	365, 387, 917, 1412, 1488, 1521, 1603
SseBI	AGGCCT	1 cut(s)	353
SsiI	CCGC	7 cut(s)	21, 121, 179, 338, 1316, 1617, 1906
SspMI	CTAG	4 cut(s)	438, 1476, 1518, 1541
SstI	GAGCTC	1 cut(s)	198
StuI	AGGCCT	1 cut(s)	353
StyD4I	CCNGG	5 cut(s)	143, 1592, 1714, 1908, 2024
StyI	CCWWGG	3 cut(s)	264, 610, 1463
TaaI	ACNGT	3 cut(s)	977, 997, 1113
TaiI	ACGT	1 cut(s)	2001
TaqI	TCGA	9 cut(s)	45, 80, 128, 198, 754, 915, 1046, 1138, 1321
TasI	AATT	7 cut(s)	365, 387, 917, 1412, 1488, 1521, 1603
TatI	WGTACW	1 cut(s)	972
TauI	GCSGC	2 cut(s)	124, 341
TfiI	GAWTC	2 cut(s)	982, 1570
Tru1I	TTAA	5 cut(s)	162, 765, 1121, 1325, 1767
Tru9I	TTAA	5 cut(s)	162, 765, 1121, 1325, 1767
TscAI	CASTG	6 cut(s)	609, 652, 739, 940, 1060, 1373
TseFI	GTSAC	3 cut(s)	28, 217, 304
TseI	GCWGC	8 cut(s)	99, 434, 575, 737, 773, 1289, 1451, 1471
Tsp45I	GTSAC	3 cut(s)	28, 217, 304
TspDTI	ATGAA	8 cut(s)	485, 869, 1189, 1371, 1514, 1613, 1857, 2132
TspGWI	ACGGA	3 cut(s)	25, 440, 516
TspRI	CASTG	6 cut(s)	609, 652, 739, 940, 1060, 1373
Van91I	CCANNNNNTGG	1 cut(s)	1082
Vha464I	CTTAAG	1 cut(s)	161
VneI	GTGCAC	3 cut(s)	1114, 1536, 1875
VpaK11BI	GGWCC	5 cut(s)	4, 679, 1712, 1790, 1913
XagI	CCTNNNNNAGG	1 cut(s)	1397
XapI	RAATTY	4 cut(s)	917, 1412, 1521, 1603
XbaI	TCTAGA	1 cut(s)	1517
XceI	RCATGY	1 cut(s)	1975
XspI	CTAG	4 cut(s)	438, 1476, 1518, 1541
Zsp2I	ATGCAT	2 cut(s)	632, 1300

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.