Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0002068

Physical Location & Seq

Genomic Coordinates Forward (+)

18225891 .. 18231652

Gene Structure 5762 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00347040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2271 bp

ATGGAGTCGACTTCCGATAGCTCGATGAAAATCTCGCCGTTGGATCTGATGGCGGCGATCTTCAAGGGCAAGATGGACCCCTCCAACGCCTCCGCTGCCTCCTCCGCCGGCGCCGAGGTCACCTCGGTCATTCTCGAGAATCGTGAGTTCGTTATGATCCTGACGACCTCGATTGCCATTTTGATTGGCTGCGTCGTCGTTTTTGTGTGGCGGCGGTCGAGTGCTCAGAAGCCCAAGGTTGTCCAGCCTCTTAAGCCGTTGCTCATCCCGGAGCCTGAACCGGAGCTCGACGATGGAAGTAAGAAGGTCACAATCTTCTTCGGCACGCAAACCGGTACTGCTGAGGGATTTGCCAAGGCTTTGGCTGAGGAAGCGAAAGCTCGCTATGAAAAGGTCACATTCAAAGTTATTGATTTGGACGATTACGCAGCTGATGACGACGAATATGAGGAGAAATTGAAAAATGAGAGTTTGGCAATTTTCTTCTTGGCCACATATGGTGATGGTGAGCCGACGGATAATGCTGCTAGATTTTACAAGTGGTTTACAGAGGGGAAAGAGAAAGAAGCATGGCTTCAAAATCTTCATTACGGAGTGTTTGGTCTTGGAAACAGGCAGTATGAGCATTTCAATAAGGTCTACTTTTTAACTGCTGTTATAACTGCCATTTTGGTCATTTCTTTACTTACTGCTTATCTGCGTGGTGAATTTTCATCACGTCATTTGTGGCACTTAGTTTTGAGTTTAAGTGGGAAGAGACTTGTTCCAGTGGGCCTTGGAGATGATGATCAATGCATAGAGGATGATTTCACTGCATGGAGAGAGTCGATGTGGCCTGAGTTGGACCAATTGCTTCGAGATGAGGATGATGCAACCACACCTGCTTGCACACCTTACACTGCTGCTGTCTTGGAGTATCGAGTTGTATTTAATGATGCCGCTGATGCACCAGTAGAGGATAAGAGCTGGAATAATGCAAACGGTCATGCTGCCATTGATGCTCAGCATCCATGCAGGGCTAATGTTGCTGTGAGAAAGGAACTTCATACTCCTGCATCTGATCGTTCTTGCACCCATCTCGAATTTGATATTGCTGGCACTGGACTTACATATGAAACTGGTGATCATGTCGGTGTGTACTGTGAGAATCTTTCTGAAACTGTGGAAGAGGCTATAAGTTTGTTGGGCTTGGCTCCGGAAACATACTTCTCGATGCACACTGATAAGGATGATGGTACACCACTTAGCGGAGGCTCCTTGTTACCTCCCTTTCCACTGTGTACATTAAGAACAGCACTAACTCGATATGCTGATCTTTTGAGTTCTCCGAAAAAGTCTGCCCTACTGGCTTTAGCTGCCTATGCATCTGATCCAGCTGAAGCAGATCGATTAAGACATCTTGCATCACCTGCTGGGAAGGATGAATATGCTCAATGGATGGTTGCAAGTCAGAGAAGCCTTCTTGAGGTCATGGCTGAATTTCCATCAGCCAAGCCCCCACTTGGAGTCTTCTTTGCAGCAGTTGCTCCAAGGTTGCAGCCTAGATACTATTCAATCTCGTCATCCCCGAGGATGGCACCATCTAGAATTCATGTTACTTGTGCACTAGTTTATGACAAAACATCAACAGGAAGGATTCACAAAGGAGTGTGTTCAACCTGGATGAAGAATTCTGTGCCTTCAGCAAAAAGTGATGATTGTAGTTGGGCACCCGTTTTTGTTCGGCAATCAAACTTCAGACTTCCCGTTGATACTAAAGTACCTATTCTTATGATTGGTCCTGGAACTGGATTGGCTCCCTTCAGGGGTTTCCTGCAGGAAAGATTAGCTCTTAAAGAAGATGGAGCAGAACTTGGACCCTCCGTATTATTCTTTGGATGCAGAAATAGTCAAATGGACTACATTTACGAAGATGAGCTGAACAACTTTGTAGAAAAAGGTGCACTTTCTGAGCTTGTGCTTGCATTCTCCCGCCAGGGACCCACCAAGGAATATGTGCAACATAAAATGATGCAGAAGGCTTCAGACATCTGGAATATGCTATCTCAGGGAGGTTATATTTACGTTTGTGGTGATGCTAAGGGCATGGCCAGGGATGTCCACCGAACTCTTCACACAATCGTGCAGGAGCAGGGATCTCTGGACAGCTCAAAAGCTGAGAGCATGGTGAAAAATCTGCAAATGAATGGCAGCCTTGACAGGACAATTGCTCGTGTTGTGATTAAAGCAATTGGTTCTGTGATTCTTTCTTTCCCCGACCTACCCATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003958 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006725 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009698 GO:0009987 GO:0012505 GO:0016491 GO:0016651 GO:0016653 GO:0019748 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0055114 GO:0071704 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAD_binding_1 Flavodoxin_1 NAD_binding_1

Protein Analysis

756

Amino Acids

83.36

Weight (kDa)

5.25

Isoelectric Point (pI)

40.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Flavodoxin_1	PF00258	105 - 273	4.4e-24	Flavodoxin
FAD_binding_1	PF00667	332 - 554	5.3e-70	FAD binding domain
NAD_binding_1	PF00175	591 - 701	5e-16	Oxidoreductase NAD-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002068)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30210 AT4G30210 AT4G30210
fragaria_vesca	FvH4_4g08180
malus_domestica	MD13G1253300.v1.1 MD16G1257600.v1.1
prunus_persica	Prupe.1G085400_v2.0.a1
pyrus_communis	pycom12480g00040 pycom13g22470
rosa_chinensis	RchiOBHm_Chr1g0334331 RchiOBHm_Chr4g0402381 RchiOBHm_Chr4g0402391 RchiOBHm_Chr4g0419591 RchiOBHm_Chr7g0226121
rosa_laevigata	RLG00000009089 RLG00000009093 RLG00000009097 RLG00000009098
rosa_multiflora	Rmu_co8074388.1_g000001 Rmu_sc0002660.1_g000001 Rmu_sc0023635.1_g000001
rosa_roxburghii	Rroxscaffold_1G00022590 Rroxscaffold_5G00347040 Rroxscaffold_5G00347050
rosa_rugosa	Rorug03G0293000 Rorug04G0034500 Rorug04G0034500 Rorug04G0034600 Rorug04G0034700 Rorug04G0034800 Rorug04G0034900 Rorug04G0035000 Rorug05G0246500
rosa_samantha	Rh4AG112500 Rh4AG112600 Rh4BG105000 Rh4BG105100 Rh4CG004400 Rh4CG119300 Rh4CG119400 Rh4DG104000 Rh4DG104100 Rh5AG337100
rosa_wichuraiana	Rw4G009010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	659
AarI	CACCTGC	2 cut(s)	889, 1417
Acc36I	ACCTGC	2 cut(s)	889, 1417
AccB1I	GGYRCC	3 cut(s)	110, 1576, 1708
AccI	GTMKAC	2 cut(s)	8, 639
AccIII	TCCGGA	1 cut(s)	1195
AciI	CCGC	8 cut(s)	53, 93, 105, 211, 214, 939, 1248, 1972
AclWI	GGATC	4 cut(s)	51, 151, 1364, 2143
AcoI	YGGCCR	2 cut(s)	489, 2088
AcsI	RAATTY	5 cut(s)	707, 1082, 1478, 1587, 1669
AcuI	CTGAAG	5 cut(s)	1398, 1665, 1720, 1786, 2007
AcyI	GRCGYC	1 cut(s)	111
AfaI	GTAC	5 cut(s)	337, 1139, 1237, 1282, 1761
AfiI	CCNNNNNNNGG	6 cut(s)	1247, 1465, 1502, 1573, 1787, 1805
AflII	CTTAAG	1 cut(s)	251
AgeI	ACCGGT	1 cut(s)	332
AgsI	TTSAA	7 cut(s)	64, 403, 460, 578, 631, 1554, 1656
AhlI	ACTAGT	1 cut(s)	1606
AjiI	CACGTC	1 cut(s)	719
AjnI	CCWGG	4 cut(s)	1658, 1780, 1974, 2090
AleI	CACNNNNGTG	1 cut(s)	2120
Alw21I	GWGCWC	4 cut(s)	226, 288, 1606, 1945
Alw26I	GTCTC	1 cut(s)	751
Alw44I	GTGCAC	2 cut(s)	1602, 1941
AlwI	GGATC	4 cut(s)	51, 151, 1364, 2143
Ama87I	CYCGRG	2 cut(s)	134, 1567
Aor13HI	TCCGGA	1 cut(s)	1195
AoxI	GGCC	4 cut(s)	489, 772, 833, 2088
ApaLI	GTGCAC	2 cut(s)	1602, 1941
ApoI	RAATTY	5 cut(s)	707, 1082, 1478, 1587, 1669
AsiGI	ACCGGT	1 cut(s)	332
AspLEI	GCGC	1 cut(s)	113
AspS9I	GGNCC	6 cut(s)	76, 772, 844, 1778, 1856, 1979
AsuC2I	CCSGG	1 cut(s)	269
AsuHPI	GGTGA	8 cut(s)	112, 512, 518, 716, 1133, 1398, 2084, 2179
AvaI	CYCGRG	2 cut(s)	134, 1567
AvaII	GGWCC	5 cut(s)	76, 844, 1778, 1856, 1979
BaeGI	GKGCMC	3 cut(s)	1606, 1711, 1945
BaeI	ACNNNNGTAYC	4 cut(s)	1743, 1743, 1776, 1776
BalI	TGGCCA	2 cut(s)	491, 2090
BanI	GGYRCC	3 cut(s)	110, 1576, 1708
BanII	GRGCYC	1 cut(s)	288
BauI	CACGAG	1 cut(s)	2211
BbsI	GAAGAC	1 cut(s)	1501
Bbv12I	GWGCWC	4 cut(s)	226, 288, 1606, 1945
BbvCI	CCTCAGC	2 cut(s)	342, 366
BceAI	ACGGC	2 cut(s)	22, 241
BcgI	CGANNNNNNTGC	2 cut(s)	1060, 1094
BciT130I	CCWGG	4 cut(s)	1660, 1782, 1976, 2092
BclI	TGATCA	2 cut(s)	787, 1123
BcnI	CCSGG	1 cut(s)	269
BcoDI	GTCTC	1 cut(s)	751
BcuI	ACTAGT	1 cut(s)	1606
BfaI	CTAG	4 cut(s)	528, 1542, 1584, 1607
BfmI	CTRYAG	1 cut(s)	1814
BfoI	RGCGCY	1 cut(s)	114
BfrI	CTTAAG	1 cut(s)	251
BfuAI	ACCTGC	2 cut(s)	889, 1417
BglI	GCCNNNNNGGC	1 cut(s)	1346
BlpI	GCTNAGC	1 cut(s)	1002
Bme1390I	CCNGG	5 cut(s)	269, 1660, 1782, 1976, 2092
Bme18I	GGWCC	5 cut(s)	76, 844, 1778, 1856, 1979
BmeT110I	CYCGRG	2 cut(s)	134, 1567
BmgBI	CACGTC	1 cut(s)	719
BmgT120I	GGNCC	6 cut(s)	76, 772, 844, 1778, 1856, 1979
BmrFI	CCNGG	5 cut(s)	269, 1660, 1782, 1976, 2092
BpiI	GAAGAC	1 cut(s)	1501
BplI	GAGNNNNNCTC	2 cut(s)	107, 139
Bpu10I	CCTNAGC	3 cut(s)	342, 366, 2079
Bpu1102I	GCTNAGC	1 cut(s)	1002
BpuEI	CTTGAG	1 cut(s)	1484
BpuMI	CCSGG	1 cut(s)	269
Bsa29I	ATCGAT	1 cut(s)	1387
BsaBI	GATNNNNATC	2 cut(s)	29, 786
BsaHI	GRCGYC	1 cut(s)	111
BsaWI	WCCGGW	3 cut(s)	280, 332, 1195
Bsc4I	CCNNNNNNNGG	6 cut(s)	1247, 1465, 1502, 1573, 1787, 1805
Bse118I	RCCGGY	2 cut(s)	107, 332
Bse1I	ACTGG	6 cut(s)	767, 950, 1105, 1123, 1350, 1792
Bse8I	GATNNNNATC	2 cut(s)	29, 786
BseAI	TCCGGA	1 cut(s)	1195
BseBI	CCWGG	4 cut(s)	1660, 1782, 1976, 2092
BseCI	ATCGAT	1 cut(s)	1387
BseJI	GATNNNNATC	2 cut(s)	29, 786
BseLI	CCNNNNNNNGG	6 cut(s)	1247, 1465, 1502, 1573, 1787, 1805
BseMII	CTCAG	8 cut(s)	239, 333, 357, 828, 1016, 1941, 2060, 2148
BseNI	ACTGG	6 cut(s)	767, 950, 1105, 1123, 1350, 1792
BseRI	GAGGAG	2 cut(s)	91, 464
BseSI	GKGCMC	3 cut(s)	1606, 1711, 1945
BseYI	CCCAGC	1 cut(s)	1412
BsgI	GTGCAG	1 cut(s)	2144
Bsh1285I	CGRYCG	1 cut(s)	218
BshFI	GGCC	4 cut(s)	491, 774, 835, 2090
BshNI	GGYRCC	3 cut(s)	110, 1576, 1708
BshTI	ACCGGT	1 cut(s)	332
BshVI	ATCGAT	1 cut(s)	1387
BsiEI	CGRYCG	1 cut(s)	218
BsiHKAI	GWGCWC	4 cut(s)	226, 288, 1606, 1945
BsiHKCI	CYCGRG	2 cut(s)	134, 1567
BsiSI	CCGG	5 cut(s)	108, 269, 281, 333, 1196
BslFI	GGGAC	1 cut(s)	1992
BslI	CCNNNNNNNGG	6 cut(s)	1247, 1465, 1502, 1573, 1787, 1805
BsmAI	GTCTC	1 cut(s)	751
BsmFI	GGGAC	1 cut(s)	1992
BsmI	GAATGC	1 cut(s)	1964
BsnI	GGCC	4 cut(s)	491, 774, 835, 2090
BsoBI	CYCGRG	2 cut(s)	134, 1567
Bsp1286I	GDGCHC	5 cut(s)	226, 288, 1606, 1711, 1945
Bsp13I	TCCGGA	1 cut(s)	1195
Bsp1407I	TGTACA	1 cut(s)	1280
Bsp1720I	GCTNAGC	1 cut(s)	1002
BspACI	CCGC	8 cut(s)	53, 93, 105, 211, 214, 939, 1248, 1972
BspANI	GGCC	4 cut(s)	491, 774, 835, 2090
BspCNI	CTCAG	8 cut(s)	238, 334, 358, 829, 1015, 1942, 2059, 2149
BspDI	ATCGAT	1 cut(s)	1387
BspEI	TCCGGA	1 cut(s)	1195
BspMAI	CTGCAG	1 cut(s)	1818
BspMI	ACCTGC	2 cut(s)	889, 1417
BspPI	GGATC	4 cut(s)	51, 151, 1364, 2143
BspT107I	GGYRCC	3 cut(s)	110, 1576, 1708
BspTI	CTTAAG	1 cut(s)	251
BsrFI	RCCGGY	2 cut(s)	107, 332
BsrGI	TGTACA	1 cut(s)	1280
BsrI	ACTGG	6 cut(s)	767, 950, 1105, 1123, 1350, 1792
BssAI	RCCGGY	2 cut(s)	107, 332
BssNI	GRCGYC	1 cut(s)	111
BssSI	CACGAG	1 cut(s)	2211
BssT1I	CCWWGG	5 cut(s)	234, 354, 775, 1529, 1986
Bst2BI	CACGAG	1 cut(s)	2211
Bst2UI	CCWGG	4 cut(s)	1660, 1782, 1976, 2092
Bst4CI	ACNGT	4 cut(s)	983, 1142, 1162, 1278
Bst6I	CTCTTC	3 cut(s)	749, 1161, 2115
BstACI	GRCGYC	1 cut(s)	111
BstAFI	CTTAAG	1 cut(s)	251
BstAPI	GCANNNNNTGC	2 cut(s)	1409, 1523
BstAUI	TGTACA	1 cut(s)	1280
BstC8I	GCNNGC	6 cut(s)	109, 326, 382, 886, 1096, 1962
BstEII	GGTNACC	1 cut(s)	118
BstENI	CCTNNNNNAGG	1 cut(s)	1463
BstH2I	RGCGCY	1 cut(s)	114
BstHHI	GCGC	1 cut(s)	113
BstMAI	GTCTC	1 cut(s)	751
BstMCI	CGRYCG	1 cut(s)	218
BstNI	CCWGG	4 cut(s)	1660, 1782, 1976, 2092
BstPI	GGTNACC	1 cut(s)	118
BstSCI	CCNGG	5 cut(s)	267, 1658, 1780, 1974, 2090
BstSFI	CTRYAG	1 cut(s)	1814
BstSLI	GKGCMC	3 cut(s)	1606, 1711, 1945
BstV2I	GAAGAC	1 cut(s)	1501
BstX2I	RGATCY	2 cut(s)	43, 2135
BstXI	CCANNNNNNTGG	1 cut(s)	361
BstYI	RGATCY	2 cut(s)	43, 2135
Bsu15I	ATCGAT	1 cut(s)	1387
BsuRI	GGCC	4 cut(s)	491, 774, 835, 2090
BsuTUI	ATCGAT	1 cut(s)	1387
BtrI	CACGTC	1 cut(s)	719
BtsI	GCAGTG	2 cut(s)	810, 897
BtsIMutI	CAGTG	6 cut(s)	774, 810, 897, 1098, 1218, 1274
BveI	ACCTGC	2 cut(s)	889, 1417
Cac8I	GCNNGC	6 cut(s)	109, 326, 382, 886, 1096, 1962
CfoI	GCGC	1 cut(s)	113
Cfr10I	RCCGGY	2 cut(s)	107, 332
Cfr13I	GGNCC	6 cut(s)	76, 772, 844, 1778, 1856, 1979
ClaI	ATCGAT	1 cut(s)	1387
CseI	GACGC	1 cut(s)	181
Csp6I	GTAC	5 cut(s)	336, 1138, 1236, 1281, 1760
CspAI	ACCGGT	1 cut(s)	332
CviAII	CATG	9 cut(s)	570, 816, 986, 1011, 1127, 1471, 1592, 2086, 2164
CviQI	GTAC	5 cut(s)	336, 1138, 1236, 1281, 1760
DinI	GGCGCC	1 cut(s)	112
EaeI	YGGCCR	2 cut(s)	489, 2088
Eam1104I	CTCTTC	3 cut(s)	749, 1161, 2115
EarI	CTCTTC	3 cut(s)	749, 1161, 2115
EciI	GGCGGA	1 cut(s)	94
Ecl136II	GAGCTC	1 cut(s)	286
Eco130I	CCWWGG	5 cut(s)	234, 354, 775, 1529, 1986
Eco24I	GRGCYC	1 cut(s)	288
Eco47I	GGWCC	5 cut(s)	76, 844, 1778, 1856, 1979
Eco53kI	GAGCTC	1 cut(s)	286
Eco57I	CTGAAG	5 cut(s)	1398, 1665, 1720, 1786, 2007
Eco88I	CYCGRG	2 cut(s)	134, 1567
Eco91I	GGTNACC	1 cut(s)	118
EcoICRI	GAGCTC	1 cut(s)	286
EcoNI	CCTNNNNNAGG	1 cut(s)	1463
EcoO109I	RGGNCCY	1 cut(s)	1979
EcoO65I	GGTNACC	1 cut(s)	118
EcoRI	GAATTC	2 cut(s)	1587, 1669
EcoRII	CCWGG	4 cut(s)	1658, 1780, 1974, 2090
EcoT14I	CCWWGG	5 cut(s)	234, 354, 775, 1529, 1986
EcoT22I	ATGCAT	2 cut(s)	797, 1366
EcoT38I	GRGCYC	1 cut(s)	288
EgeI	GGCGCC	1 cut(s)	112
EheI	GGCGCC	1 cut(s)	112
ErhI	CCWWGG	5 cut(s)	234, 354, 775, 1529, 1986
FaeI	CATG	9 cut(s)	573, 819, 989, 1014, 1130, 1474, 1595, 2089, 2167
FalI	AAGNNNNNCTT	6 cut(s)	558, 590, 626, 658, 1929, 1961
FaqI	GGGAC	1 cut(s)	1992
FatI	CATG	9 cut(s)	569, 815, 985, 1010, 1126, 1470, 1591, 2085, 2163
FauI	CCCGC	1 cut(s)	1979
FauNDI	CATATG	3 cut(s)	496, 1111, 2267
FbaI	TGATCA	2 cut(s)	787, 1123
FblI	GTMKAC	2 cut(s)	8, 639
FriOI	GRGCYC	1 cut(s)	288
FspBI	CTAG	4 cut(s)	528, 1542, 1584, 1607
GlaI	GCGC	1 cut(s)	112
GsaI	CCCAGC	1 cut(s)	1416
HaeII	RGCGCY	1 cut(s)	114
HaeIII	GGCC	4 cut(s)	491, 774, 835, 2090
HapII	CCGG	5 cut(s)	108, 269, 281, 333, 1196
HgaI	GACGC	1 cut(s)	181
HhaI	GCGC	1 cut(s)	113
Hin1I	GRCGYC	1 cut(s)	111
Hin1II	CATG	9 cut(s)	573, 819, 989, 1014, 1130, 1474, 1595, 2089, 2167
Hin6I	GCGC	1 cut(s)	111
HinP1I	GCGC	1 cut(s)	111
HincII	GTYRAC	1 cut(s)	9
HindII	GTYRAC	1 cut(s)	9
HinfI	GANTC	7 cut(s)	5, 139, 824, 1147, 1506, 1636, 2242
HpaII	CCGG	5 cut(s)	108, 269, 281, 333, 1196
HphI	GGTGA	8 cut(s)	112, 512, 518, 716, 1133, 1398, 2084, 2179
Hpy166II	GTNNAC	9 cut(s)	9, 546, 640, 1138, 1238, 1281, 1604, 1943, 2101
Hpy8I	GTNNAC	9 cut(s)	9, 546, 640, 1138, 1238, 1281, 1604, 1943, 2101
Hpy99I	CGWCG	5 cut(s)	197, 200, 293, 443, 517
HpyAV	CCTTC	7 cut(s)	298, 1411, 1469, 1626, 1689, 1810, 2011
HpyCH4III	ACNGT	4 cut(s)	983, 1142, 1162, 1278
HpyCH4IV	ACGT	2 cut(s)	718, 2064
HpySE526I	ACGT	2 cut(s)	718, 2064
Hsp92I	GRCGYC	1 cut(s)	111
Hsp92II	CATG	9 cut(s)	573, 819, 989, 1014, 1130, 1474, 1595, 2089, 2167
HspAI	GCGC	1 cut(s)	111
KasI	GGCGCC	1 cut(s)	110
KflI	GGGWCCC	1 cut(s)	1979
Kpn2I	TCCGGA	1 cut(s)	1195
KroI	GCCGGC	1 cut(s)	107
KroNI	GCCGGC	1 cut(s)	109
Ksp22I	TGATCA	2 cut(s)	787, 1123
LmnI	GCTCC	8 cut(s)	271, 283, 1198, 1259, 1531, 1801, 1844, 2128
MaeI	CTAG	4 cut(s)	528, 1542, 1584, 1607
MaeII	ACGT	2 cut(s)	718, 2064
MaeIII	GTNAC	5 cut(s)	118, 307, 394, 1260, 1594
MfeI	CAATTG	3 cut(s)	848, 2205, 2229
MflI	RGATCY	2 cut(s)	43, 2135
MhlI	GDGCHC	5 cut(s)	226, 288, 1606, 1711, 1945
MlsI	TGGCCA	2 cut(s)	491, 2090
MluNI	TGGCCA	2 cut(s)	491, 2090
Mly113I	GGCGCC	1 cut(s)	111
MlyI	GAGTC	3 cut(s)	14, 833, 1515
MmeI	TCCRAC	3 cut(s)	21, 108, 822
Mox20I	TGGCCA	2 cut(s)	491, 2090
Mph1103I	ATGCAT	2 cut(s)	797, 1366
MreI	CGCCGGCG	1 cut(s)	107
MroI	TCCGGA	1 cut(s)	1195
MroNI	GCCGGC	1 cut(s)	107
MscI	TGGCCA	2 cut(s)	491, 2090
MseI	TTAA	8 cut(s)	252, 647, 746, 930, 1286, 1391, 1833, 2223
MslI	CAYNNNNRTG	2 cut(s)	1131, 2120
Msp20I	TGGCCA	2 cut(s)	491, 2090
MspA1I	CMGCKG	4 cut(s)	95, 431, 941, 1376
MspCI	CTTAAG	1 cut(s)	251
MspI	CCGG	5 cut(s)	108, 269, 281, 333, 1196
MspR9I	CCNGG	5 cut(s)	269, 1660, 1782, 1976, 2092
MunI	CAATTG	3 cut(s)	848, 2205, 2229
Mva1269I	GAATGC	1 cut(s)	1964
MvaI	CCWGG	4 cut(s)	1660, 1782, 1976, 2092
NaeI	GCCGGC	1 cut(s)	109
NarI	GGCGCC	1 cut(s)	111
NciI	CCSGG	1 cut(s)	269
NdeI	CATATG	3 cut(s)	496, 1111, 2267
NgoMIV	GCCGGC	1 cut(s)	107
NlaIII	CATG	9 cut(s)	573, 819, 989, 1014, 1130, 1474, 1595, 2089, 2167
NmeAIII	GCCGAG	1 cut(s)	139
NmuCI	GTSAC	3 cut(s)	118, 307, 394
NsiI	ATGCAT	2 cut(s)	797, 1366
OliI	CACNNNNGTG	1 cut(s)	2120
PaeR7I	CTCGAG	1 cut(s)	134
PaqCI	CACCTGC	2 cut(s)	889, 1417
PcsI	WCGNNNNNNNCGW	1 cut(s)	1565
PctI	GAATGC	1 cut(s)	1964
PdiI	GCCGGC	1 cut(s)	109
PfeI	GAWTC	4 cut(s)	139, 1147, 1636, 2242
PfoI	TCCNGGA	2 cut(s)	267, 1780
PinAI	ACCGGT	1 cut(s)	332
PleI	GAGTC	3 cut(s)	13, 832, 1514
PluTI	GGCGCC	1 cut(s)	114
PpsI	GAGTC	3 cut(s)	13, 832, 1514
PpuMI	RGGWCCY	1 cut(s)	1979
PsiI	TTATAA	1 cut(s)	659
Psp124BI	GAGCTC	1 cut(s)	288
Psp5II	RGGWCCY	1 cut(s)	1979
Psp6I	CCWGG	4 cut(s)	1658, 1780, 1974, 2090
PspEI	GGTNACC	1 cut(s)	118
PspFI	CCCAGC	1 cut(s)	1412
PspGI	CCWGG	4 cut(s)	1658, 1780, 1974, 2090
PspPI	GGNCC	6 cut(s)	76, 772, 844, 1778, 1856, 1979
PspPPI	RGGWCCY	1 cut(s)	1979
PstI	CTGCAG	1 cut(s)	1818
PsuI	RGATCY	2 cut(s)	43, 2135
PvuII	CAGCTG	2 cut(s)	431, 1376
RsaI	GTAC	5 cut(s)	337, 1139, 1237, 1282, 1761
RsaNI	GTAC	5 cut(s)	336, 1138, 1236, 1281, 1760
RseI	CAYNNNNRTG	2 cut(s)	1131, 2120
SacI	GAGCTC	1 cut(s)	288
SalI	GTCGAC	1 cut(s)	7
SaqAI	TTAA	8 cut(s)	252, 647, 746, 930, 1286, 1391, 1833, 2223
Sau96I	GGNCC	6 cut(s)	76, 772, 844, 1778, 1856, 1979
SbfI	CCTGCAGG	1 cut(s)	1818
SchI	GAGTC	3 cut(s)	14, 833, 1515
ScrFI	CCNGG	5 cut(s)	269, 1660, 1782, 1976, 2092
SdaI	CCTGCAGG	1 cut(s)	1818
SduI	GDGCHC	5 cut(s)	226, 288, 1606, 1711, 1945
SfcI	CTRYAG	1 cut(s)	1814
SfoI	GGCGCC	1 cut(s)	112
Sfr274I	CTCGAG	1 cut(s)	134
SgrAI	CRCCGGYG	1 cut(s)	107
SinI	GGWCC	5 cut(s)	76, 844, 1778, 1856, 1979
SlaI	CTCGAG	1 cut(s)	134
SmiMI	CAYNNNNRTG	2 cut(s)	1131, 2120
SmlI	CTYRAG	3 cut(s)	134, 251, 1463
SmoI	CTYRAG	3 cut(s)	134, 251, 1463
SpeI	ACTAGT	1 cut(s)	1606
Sse8387I	CCTGCAGG	1 cut(s)	1818
SsiI	CCGC	8 cut(s)	53, 93, 105, 211, 214, 939, 1248, 1972
SspDI	GGCGCC	1 cut(s)	110
SspMI	CTAG	4 cut(s)	528, 1542, 1584, 1607
SstI	GAGCTC	1 cut(s)	288
StyD4I	CCNGG	5 cut(s)	267, 1658, 1780, 1974, 2090
StyI	CCWWGG	5 cut(s)	234, 354, 775, 1529, 1986
TaaI	ACNGT	4 cut(s)	983, 1142, 1162, 1278
TaiI	ACGT	2 cut(s)	721, 2067
TaqII	GACCGA	1 cut(s)	115
TatI	WGTACW	2 cut(s)	1137, 1280
TauI	GCSGC	3 cut(s)	56, 214, 941
TfiI	GAWTC	4 cut(s)	139, 1147, 1636, 2242
Tru1I	TTAA	8 cut(s)	252, 647, 746, 930, 1286, 1391, 1833, 2223
Tru9I	TTAA	8 cut(s)	252, 647, 746, 930, 1286, 1391, 1833, 2223
TscAI	CASTG	6 cut(s)	774, 817, 904, 1105, 1225, 1281
TseFI	GTSAC	3 cut(s)	118, 307, 394
Tsp45I	GTSAC	3 cut(s)	118, 307, 394
TspGWI	ACGGA	3 cut(s)	530, 606, 1852
TspRI	CASTG	6 cut(s)	774, 817, 904, 1105, 1225, 1281
Vha464I	CTTAAG	1 cut(s)	251
VneI	GTGCAC	2 cut(s)	1602, 1941
VpaK11BI	GGWCC	5 cut(s)	76, 844, 1778, 1856, 1979
XagI	CCTNNNNNAGG	1 cut(s)	1463
XapI	RAATTY	5 cut(s)	707, 1082, 1478, 1587, 1669
XbaI	TCTAGA	1 cut(s)	1583
XhoI	CTCGAG	1 cut(s)	134
XmiI	GTMKAC	2 cut(s)	8, 639
XspI	CTAG	4 cut(s)	528, 1542, 1584, 1607
Zsp2I	ATGCAT	2 cut(s)	797, 1366

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.