Prupe.1G229700_v2.0.a1

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001080
Physical Location & Seq
Forward (+)
24256176 .. 24258117
1942 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G229700.1

Sequence Viewer

Length: 1521 bp
ATGGATTTCTTGAGTTTTTGTATGGTCCTCCTAATCAGTCTTTTCTTTGTGTTCTTGTTCTCAATTCAAGCCCTTAGAAGCAAAGTCAACCCCAAAAGGCATCTTCTTCCACCTGGACCTAAGCCACTTCCTTTCATTGGCAATCTCCTAGAACTTGGAAACAAACCCCATCTCGATTTCACCAAGCTTTCTCAAATCTATGGCCCCATTATAACTCTGCAACTCGGCCAAGTAACAACGGTGGTTGTTTCTTCGTCAAACACAGCCAAACAAGTCCTCCAAACCCATGACCAATTCTTGTCCAACCGAACCGTGCCAGATGCAATCCAAGCCAGTGACCTTCGCGGAGACAGCCTGCCTTGGATACCAACTTCACCCAAATGGAGAAGCCTTCGAAAAATATGCAACTCTCACTTGTTCGCCCCCAAAATCCTTGACGCCAACCAACCCAGCCGCCGCATGAAAGTGCAAGAGCTCATATCTGATGTCAATGAAAGCTTGGTCAAAGGTGAGGCGGTAGATATTGGAAGGGCCGCTTTCAAAACGACGCTCAATCTGCTGTCGCGTACTATCTTCTCTGTGGATTTGGCTGACTCAAGTAGCGAGATGGCCAGAGAGTTCAAAGAGACTGTGTGGGGTTCGATGGAAGAGGCAGGGAAGCCAAATTGGGCAGACTTTTTCCCTGTTCTTAAGAAAATTGACCCTCAGGGAATTAGGCGGCGCATGATCAAACATGTCCGGAAGATAGAACAGGTCTTTGACCGCATCATTAGCCAAAGATTGGAATCTAGAAAAGCCCATGATTATGTCACAACCAATGATATGTTGGATACTCTTTTAAACATCAGTGAAGTGAACAGTGAGGACATGGACATGACCAAACTTCAACATCTGCTTATGATTCTATTTACTGCGGGCACAGATACAACCTCAGCCACGTTGGAATGGGCAATGGCTGAGCTGCTACGCAACCCTGAAAAGCTGTCAAAAGCTCAACAAGAGCTGGAGAAAATCATTGGCAAAGGAAAACCAATACAGGAAGGAGACATTGCTCGGCTTCCTTACTTCCAAGCAACAATCAAGGAGACCTTTCGGCTGCACCCAGCAACTCCATTGCTTCTCCCTAGAAAAGCCGATGCAGACGTTGAAATTTGCGGGTATATTGTACCCAAGGGTGCACAAGTGTTTGTGAATGCATGGGCCATCGGCAGAGACCCCAGCATTTGGGACAACCCAAGCTCATTTGTGCCTGAGAGGTTCTTGGGATTGGATGACCAAATTGATGTTATCGGGAAAAACTTTGAGCTTATCCCATTTGGTGCTGGGAGGAGAATATGTCCTGGCTTGTCGTGGACAATGCGAATTCTGCCCTTGATGTTGGGTTCACTCATTAACTCTTTTGAATGGAAGCTTGAAGATGGAGTTTTACCAGAGACCTTGAATATGGAAGAGAAGTTTGGCCTCACCTTGCAGATGGCTCACCCTCTTAGAGCTGTGCCAAAGTCATTTTGTGAAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

507

Amino Acids

57.12

Weight (kDa)

8.15

Isoelectric Point (pI)

35.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 212
AccB7I CCANNNNNTGG 2 cut(s) 781, 1224
AccII CGCG 2 cut(s) 345, 565
AccIII TCCGGA 1 cut(s) 738
AciI CCGC 9 cut(s) 345, 454, 457, 515, 534, 718, 763, 914, 1155
AcoI YGGCCR 2 cut(s) 226, 609
AcsI RAATTY 3 cut(s) 1149, 1362, 1515
AcyI GRCGYC 1 cut(s) 438
AfaI GTAC 2 cut(s) 568, 1167
AfiI CCNNNNNNNGG 3 cut(s) 137, 781, 1224
AflII CTTAAG 1 cut(s) 689
AflIII ACRYGT 1 cut(s) 733
AgsI TTSAA 8 cut(s) 68, 541, 622, 887, 1148, 1403, 1415, 1441
AjnI CCWGG 2 cut(s) 112, 1339
AjuI GAANNNNNNNTTGG 2 cut(s) 1440, 1472
Alw21I GWGCWC 2 cut(s) 477, 1180
Alw26I GTCTC 6 cut(s) 342, 620, 1038, 1079, 1206, 1427
Alw44I GTGCAC 1 cut(s) 1176
Aor13HI TCCGGA 1 cut(s) 738
AoxI GGCC 6 cut(s) 202, 226, 531, 609, 1200, 1459
ApaLI GTGCAC 1 cut(s) 1176
ApeKI GCWGC 2 cut(s) 961, 1096
ApoI RAATTY 3 cut(s) 1149, 1362, 1515
AspLEI GCGC 1 cut(s) 723
AspS9I GGNCC 5 cut(s) 25, 116, 203, 531, 1200
AsuHPI GGTGA 5 cut(s) 172, 366, 521, 1456, 1472
AsuII TTCGAA 1 cut(s) 394
AvaII GGWCC 2 cut(s) 25, 116
AxyI CCTNAGG 1 cut(s) 705
BaeGI GKGCMC 2 cut(s) 920, 1180
BalI TGGCCA 1 cut(s) 611
BanII GRGCYC 1 cut(s) 477
Bbv12I GWGCWC 2 cut(s) 477, 1180
BbvCI CCTCAGC 1 cut(s) 931
BbvI GCAGC 2 cut(s) 948, 1083
BccI CCATC 6 cut(s) 177, 601, 637, 1211, 1412, 1468
BcgI CGANNNNNNTGC 2 cut(s) 384, 418
BciT130I CCWGG 2 cut(s) 114, 1341
BciVI GTATCC 2 cut(s) 357, 823
BclI TGATCA 1 cut(s) 726
BcoDI GTCTC 6 cut(s) 342, 620, 1038, 1079, 1206, 1427
BfaI CTAG 3 cut(s) 149, 789, 1125
BfrI CTTAAG 1 cut(s) 689
BfuI GTATCC 2 cut(s) 357, 823
BisI GCNGC 6 cut(s) 454, 457, 534, 719, 962, 1097
BlpI GCTNAGC 1 cut(s) 957
BlsI GCNGC 6 cut(s) 455, 458, 535, 720, 963, 1098
Bme1390I CCNGG 2 cut(s) 114, 1341
Bme18I GGWCC 2 cut(s) 25, 116
BmgT120I GGNCC 5 cut(s) 25, 116, 203, 531, 1200
BmiI GGNNCC 1 cut(s) 205
BmrFI CCNGG 2 cut(s) 114, 1341
BmsI GCATC 4 cut(s) 109, 310, 774, 1126
BpmI CTGGAG 1 cut(s) 1025
Bpu10I CCTNAGC 2 cut(s) 120, 931
Bpu1102I GCTNAGC 1 cut(s) 957
Bpu14I TTCGAA 1 cut(s) 394
BpuEI CTTGAG 2 cut(s) 31, 580
BsaBI GATNNNNATC 1 cut(s) 784
BsaHI GRCGYC 1 cut(s) 438
BsaI GGTCTC 3 cut(s) 1079, 1206, 1427
BsaJI CCNNGG 2 cut(s) 359, 1170
BsaWI WCCGGW 1 cut(s) 738
BsaXI ACNNNNNCTCC 4 cut(s) 261, 291, 1321, 1351
Bsc4I CCNNNNNNNGG 3 cut(s) 137, 781, 1224
Bse1I ACTGG 1 cut(s) 333
Bse21I CCTNAGG 1 cut(s) 705
Bse3DI GCAATG 3 cut(s) 957, 1047, 1112
Bse8I GATNNNNATC 1 cut(s) 784
BseAI TCCGGA 1 cut(s) 738
BseBI CCWGG 2 cut(s) 114, 1341
BseDI CCNNGG 2 cut(s) 359, 1170
BseGI GGATG 1 cut(s) 1276
BseJI GATNNNNATC 1 cut(s) 784
BseLI CCNNNNNNNGG 3 cut(s) 137, 781, 1224
BseMI GCAATG 3 cut(s) 957, 1047, 1112
BseMII CTCAG 4 cut(s) 719, 945, 948, 1242
BseNI ACTGG 1 cut(s) 333
BseRI GAGGAG 1 cut(s) 1342
BseSI GKGCMC 2 cut(s) 920, 1180
BseXI GCAGC 2 cut(s) 948, 1083
BseYI CCCAGC 4 cut(s) 449, 1102, 1217, 1322
BsgI GTGCAG 1 cut(s) 1082
Bsh1236I CGCG 2 cut(s) 345, 565
BshFI GGCC 6 cut(s) 204, 228, 533, 611, 1202, 1461
BsiHKAI GWGCWC 2 cut(s) 477, 1180
BsiSI CCGG 1 cut(s) 739
BslFI GGGAC 1 cut(s) 1241
BslI CCNNNNNNNGG 3 cut(s) 137, 781, 1224
BsmAI GTCTC 6 cut(s) 342, 620, 1038, 1079, 1206, 1427
BsmFI GGGAC 1 cut(s) 1241
BsmI GAATGC 1 cut(s) 1198
BsnI GGCC 6 cut(s) 204, 228, 533, 611, 1202, 1461
Bso31I GGTCTC 3 cut(s) 1079, 1206, 1427
Bsp119I TTCGAA 1 cut(s) 394
Bsp1286I GDGCHC 3 cut(s) 477, 920, 1180
Bsp13I TCCGGA 1 cut(s) 738
Bsp143I GATC 1 cut(s) 726
Bsp1720I GCTNAGC 1 cut(s) 957
BspACI CCGC 9 cut(s) 345, 454, 457, 515, 534, 718, 763, 914, 1155
BspANI GGCC 6 cut(s) 204, 228, 533, 611, 1202, 1461
BspCNI CTCAG 4 cut(s) 718, 944, 949, 1243
BspEI TCCGGA 1 cut(s) 738
BspFNI CGCG 2 cut(s) 345, 565
BspLI GGNNCC 1 cut(s) 205
BspT104I TTCGAA 1 cut(s) 394
BspTI CTTAAG 1 cut(s) 689
BspTNI GGTCTC 3 cut(s) 1079, 1206, 1427
BsrDI GCAATG 3 cut(s) 957, 1047, 1112
BsrI ACTGG 1 cut(s) 333
BssECI CCNNGG 2 cut(s) 359, 1170
BssMI GATC 1 cut(s) 726
BssNI GRCGYC 1 cut(s) 438
BssT1I CCWWGG 2 cut(s) 359, 1170
Bst2UI CCWGG 2 cut(s) 114, 1341
Bst4CI ACNGT 4 cut(s) 241, 313, 631, 860
Bst6I CTCTTC 2 cut(s) 642, 1443
BstACI GRCGYC 1 cut(s) 438
BstAFI CTTAAG 1 cut(s) 689
BstBI TTCGAA 1 cut(s) 394
BstC8I GCNNGC 2 cut(s) 356, 916
BstDEI CTNAG 7 cut(s) 74, 120, 705, 931, 957, 1251, 1487
BstF5I GGATG 1 cut(s) 1276
BstFNI CGCG 2 cut(s) 345, 565
BstHHI GCGC 1 cut(s) 723
BstKTI GATC 1 cut(s) 729
BstMAI GTCTC 6 cut(s) 342, 620, 1038, 1079, 1206, 1427
BstMBI GATC 1 cut(s) 726
BstMWI GCNNNNNNNGC 5 cut(s) 329, 351, 556, 771, 1366
BstNI CCWGG 2 cut(s) 114, 1341
BstNSI RCATGY 1 cut(s) 737
BstSCI CCNGG 2 cut(s) 112, 1339
BstSLI GKGCMC 2 cut(s) 920, 1180
BstUI CGCG 2 cut(s) 345, 565
BstV1I GCAGC 2 cut(s) 948, 1083
Bsu36I CCTNAGG 1 cut(s) 705
BsuI GTATCC 2 cut(s) 357, 823
BsuRI GGCC 6 cut(s) 204, 228, 533, 611, 1202, 1461
BtsCI GGATG 1 cut(s) 1276
BtsIMutI CAGTG 3 cut(s) 340, 853, 865
Cac8I GCNNGC 2 cut(s) 356, 916
CfoI GCGC 1 cut(s) 723
Cfr13I GGNCC 5 cut(s) 25, 116, 203, 531, 1200
CseI GACGC 2 cut(s) 446, 556
Csp6I GTAC 2 cut(s) 567, 1166
CviAII CATG 8 cut(s) 287, 460, 724, 734, 800, 868, 874, 1197
CviQI GTAC 2 cut(s) 567, 1166
DdeI CTNAG 7 cut(s) 74, 120, 705, 931, 957, 1251, 1487
DpnI GATC 1 cut(s) 728
DpnII GATC 1 cut(s) 726
DraI TTTAAA 1 cut(s) 840
EaeI YGGCCR 2 cut(s) 226, 609
Eam1104I CTCTTC 2 cut(s) 642, 1443
EarI CTCTTC 2 cut(s) 642, 1443
Ecl136II GAGCTC 1 cut(s) 475
Eco130I CCWWGG 2 cut(s) 359, 1170
Eco24I GRGCYC 1 cut(s) 477
Eco31I GGTCTC 3 cut(s) 1079, 1206, 1427
Eco47I GGWCC 2 cut(s) 25, 116
Eco53kI GAGCTC 1 cut(s) 475
Eco81I CCTNAGG 1 cut(s) 705
EcoICRI GAGCTC 1 cut(s) 475
EcoRI GAATTC 1 cut(s) 1362
EcoRII CCWGG 2 cut(s) 112, 1339
EcoT14I CCWWGG 2 cut(s) 359, 1170
EcoT22I ATGCAT 1 cut(s) 1198
EcoT38I GRGCYC 1 cut(s) 477
ErhI CCWWGG 2 cut(s) 359, 1170
FaeI CATG 8 cut(s) 290, 463, 727, 737, 803, 871, 877, 1200
FalI AAGNNNNNCTT 4 cut(s) 520, 552, 1073, 1105
FaqI GGGAC 1 cut(s) 1241
FatI CATG 8 cut(s) 286, 459, 723, 733, 799, 867, 873, 1196
FauI CCCGC 2 cut(s) 907, 1148
FbaI TGATCA 1 cut(s) 726
Fnu4HI GCNGC 6 cut(s) 454, 457, 534, 719, 962, 1097
FokI GGATG 1 cut(s) 1283
FriOI GRGCYC 1 cut(s) 477
Fsp4HI GCNGC 6 cut(s) 454, 457, 534, 719, 962, 1097
FspBI CTAG 3 cut(s) 149, 789, 1125
GlaI GCGC 1 cut(s) 722
GluI GCNGC 6 cut(s) 454, 457, 534, 719, 962, 1097
GsaI CCCAGC 4 cut(s) 453, 1106, 1221, 1326
GsuI CTGGAG 1 cut(s) 1025
HaeIII GGCC 6 cut(s) 204, 228, 533, 611, 1202, 1461
HapII CCGG 1 cut(s) 739
HgaI GACGC 2 cut(s) 446, 556
HhaI GCGC 1 cut(s) 723
Hin1I GRCGYC 1 cut(s) 438
Hin1II CATG 8 cut(s) 290, 463, 727, 737, 803, 871, 877, 1200
Hin6I GCGC 1 cut(s) 721
HinP1I GCGC 1 cut(s) 721
HincII GTYRAC 1 cut(s) 88
HindII GTYRAC 1 cut(s) 88
HindIII AAGCTT 3 cut(s) 185, 496, 1409
HinfI GANTC 3 cut(s) 593, 785, 901
HpaII CCGG 1 cut(s) 739
HphI GGTGA 5 cut(s) 172, 366, 521, 1456, 1472
Hpy166II GTNNAC 5 cut(s) 88, 856, 1178, 1353, 1385
Hpy188I TCNGA 1 cut(s) 484
Hpy188III TCNNGA 5 cut(s) 10, 173, 739, 789, 1291
Hpy8I GTNNAC 5 cut(s) 88, 856, 1178, 1353, 1385
Hpy99I CGWCG 1 cut(s) 550
HpyAV CCTTC 4 cut(s) 350, 401, 522, 1034
HpyCH4III ACNGT 4 cut(s) 241, 313, 631, 860
HpyCH4IV ACGT 2 cut(s) 938, 1143
HpyCH4V TGCA 9 cut(s) 220, 323, 405, 469, 1099, 1139, 1178, 1196, 1471
HpyF10VI GCNNNNNNNGC 5 cut(s) 329, 351, 556, 771, 1366
HpyF3I CTNAG 7 cut(s) 74, 120, 705, 931, 957, 1251, 1487
HpySE526I ACGT 2 cut(s) 938, 1143
Hsp92I GRCGYC 1 cut(s) 438
Hsp92II CATG 8 cut(s) 290, 463, 727, 737, 803, 871, 877, 1200
HspAI GCGC 1 cut(s) 721
Kpn2I TCCGGA 1 cut(s) 738
Ksp22I TGATCA 1 cut(s) 726
Kzo9I GATC 1 cut(s) 726
Lsp1109I GCAGC 2 cut(s) 948, 1083
LweI GCATC 4 cut(s) 109, 310, 774, 1126
MaeI CTAG 3 cut(s) 149, 789, 1125
MaeII ACGT 2 cut(s) 938, 1143
MaeIII GTNAC 3 cut(s) 232, 335, 808
MalI GATC 1 cut(s) 728
MboI GATC 1 cut(s) 726
MboII GAAGA 8 cut(s) 95, 98, 243, 565, 659, 754, 1427, 1460
MhlI GDGCHC 3 cut(s) 477, 920, 1180
MlsI TGGCCA 1 cut(s) 611
MluCI AATT 9 cut(s) 63, 293, 664, 696, 711, 1149, 1278, 1362, 1515
MluNI TGGCCA 1 cut(s) 611
MlyI GAGTC 1 cut(s) 587
MmeI TCCRAC 3 cut(s) 327, 807, 921
Mox20I TGGCCA 1 cut(s) 611
Mph1103I ATGCAT 1 cut(s) 1198
MroI TCCGGA 1 cut(s) 738
MscI TGGCCA 1 cut(s) 611
MseI TTAA 4 cut(s) 690, 839, 1392, 1519
MslI CAYNNNNRTG 4 cut(s) 379, 464, 804, 872
Msp20I TGGCCA 1 cut(s) 611
MspCI CTTAAG 1 cut(s) 689
MspI CCGG 1 cut(s) 739
MspR9I CCNGG 2 cut(s) 114, 1341
Mva1269I GAATGC 1 cut(s) 1198
MvaI CCWGG 2 cut(s) 114, 1341
MvnI CGCG 2 cut(s) 345, 565
MwoI GCNNNNNNNGC 5 cut(s) 329, 351, 556, 771, 1366
NdeII GATC 1 cut(s) 726
NlaIII CATG 8 cut(s) 290, 463, 727, 737, 803, 871, 877, 1200
NlaIV GGNNCC 1 cut(s) 205
NmeAIII GCCGAG 2 cut(s) 204, 1033
NmuCI GTSAC 2 cut(s) 335, 808
NsiI ATGCAT 1 cut(s) 1198
NspI RCATGY 1 cut(s) 737
NspV TTCGAA 1 cut(s) 394
PciI ACATGT 1 cut(s) 733
PctI GAATGC 1 cut(s) 1198
PfeI GAWTC 2 cut(s) 785, 901
PflMI CCANNNNNTGG 2 cut(s) 781, 1224
PkrI GCNGC 6 cut(s) 455, 458, 535, 720, 963, 1098
PleI GAGTC 1 cut(s) 587
PpsI GAGTC 1 cut(s) 587
PscI ACATGT 1 cut(s) 733
PsiI TTATAA 1 cut(s) 212
Psp124BI GAGCTC 1 cut(s) 477
Psp6I CCWGG 2 cut(s) 112, 1339
PspFI CCCAGC 4 cut(s) 449, 1102, 1217, 1322
PspGI CCWGG 2 cut(s) 112, 1339
PspN4I GGNNCC 1 cut(s) 205
PspPI GGNCC 5 cut(s) 25, 116, 203, 531, 1200
RsaI GTAC 2 cut(s) 568, 1167
RsaNI GTAC 2 cut(s) 567, 1166
RseI CAYNNNNRTG 4 cut(s) 379, 464, 804, 872
SacI GAGCTC 1 cut(s) 477
SaqAI TTAA 4 cut(s) 690, 839, 1392, 1519
SatI GCNGC 6 cut(s) 454, 457, 534, 719, 962, 1097
Sau3AI GATC 1 cut(s) 726
Sau96I GGNCC 5 cut(s) 25, 116, 203, 531, 1200
SchI GAGTC 1 cut(s) 587
ScrFI CCNGG 2 cut(s) 114, 1341
SduI GDGCHC 3 cut(s) 477, 920, 1180
SfaNI GCATC 4 cut(s) 109, 310, 774, 1126
SfuI TTCGAA 1 cut(s) 394
SinI GGWCC 2 cut(s) 25, 116
SmiMI CAYNNNNRTG 4 cut(s) 379, 464, 804, 872
SmlI CTYRAG 3 cut(s) 10, 595, 689
SmoI CTYRAG 3 cut(s) 10, 595, 689
Sse9I AATT 9 cut(s) 63, 293, 664, 696, 711, 1149, 1278, 1362, 1515
SsiI CCGC 9 cut(s) 345, 454, 457, 515, 534, 718, 763, 914, 1155
SspMI CTAG 3 cut(s) 149, 789, 1125
SstI GAGCTC 1 cut(s) 477
StyD4I CCNGG 2 cut(s) 112, 1339
StyI CCWWGG 2 cut(s) 359, 1170
TaaI ACNGT 4 cut(s) 241, 313, 631, 860
TaiI ACGT 2 cut(s) 941, 1146
TaqI TCGA 3 cut(s) 174, 394, 641
TasI AATT 9 cut(s) 63, 293, 664, 696, 711, 1149, 1278, 1362, 1515
TauI GCSGC 4 cut(s) 456, 459, 536, 721
TfiI GAWTC 2 cut(s) 785, 901
Tru1I TTAA 4 cut(s) 690, 839, 1392, 1519
Tru9I TTAA 4 cut(s) 690, 839, 1392, 1519
TscAI CASTG 3 cut(s) 340, 853, 865
TseFI GTSAC 2 cut(s) 335, 808
TseI GCWGC 2 cut(s) 961, 1096
Tsp45I GTSAC 2 cut(s) 335, 808
TspDTI ATGAA 3 cut(s) 124, 476, 507
TspRI CASTG 3 cut(s) 340, 853, 865
Van91I CCANNNNNTGG 2 cut(s) 781, 1224
Vha464I CTTAAG 1 cut(s) 689
VneI GTGCAC 1 cut(s) 1176
VpaK11BI GGWCC 2 cut(s) 25, 116
XapI RAATTY 3 cut(s) 1149, 1362, 1515
XbaI TCTAGA 1 cut(s) 788
XceI RCATGY 1 cut(s) 737
XcmI CCANNNNNNNNNTGG 1 cut(s) 823
XspI CTAG 3 cut(s) 149, 789, 1125
Zsp2I ATGCAT 1 cut(s) 1198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.