RchiOBHm_Chr7g0200251

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0001080
Physical Location & Seq
Forward (+)
18079202 .. 18080824
1623 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17922

Sequence Viewer

Length: 942 bp
ATGAACTTCTGGAGTGCTTTCGTTTACCTTATCCTCACCTGGACATTGATCCAAGCCCTCCTCTACTCAATTTCAAGAGCCAAAAACACCTCCAAAAAGCTTCCACCAGGTCCAAAACCGCTTCCAATCCTCGGAAACCTTCTCCTACTTGGTGACAAACCTCACAAATCTCTTGCCAAACTTGCCCAAATTCATGGCCCTTTAATGTCCCTAAAACTTGGACAGGTAACCTCCATAGTTGTTTCTTCATCAGCCATGGCCAAACAAGTCATGCAAACCCATGATCAATTCTTCTCCAACCGAACAATCCCCGATTCCATTCGAGCCCTTGATCACCACATTGTTGGCTTGCCATGGATCCCTGTCTCACCCCTCTGGAGAAACCTAAGAAAAATATGCAACACTCAGCTATTTGCCAACAAGATGCTTGATGCTAACCAAAACCTGCGACGCAAAAAAGTGGAGCAACTCCTTGAATCAGTCCATAAAAGCAGCCTGAGTGGGGAAGCAGTTGACTTTGGTAGGGCAGCTTTCACCACAACACTCAATTTGCTCTCTAATACAACTTTTTCAATTGATTTAGCAGACCCGAGTTCCAAAATGGCCAGGGAGTTCAAGGAGATGATGCATAATATTATGATCGAGGCTGGAAAACCAAACTTGGGGGACTATTTTCCTGTGCTTAGGAAGATTGATCCTAATGGCAGAAGAAGGAGAATGATAAAGTATTTTGGAAAGATAATAGATTTAGTTGAAACAATAGTTCAGCAGAGGTTGGAGCTGAGAAAATCGACTGAATCTGCAACAAAGAACGATGTGTTGGATACCCTTCTCACTATTACAGAAGAAAACAGTGAGGAGCTCAACAAAAATCAACTATATCATTTCATACTGGTCAGTTTGTATTACCTTTTTCATTTTCAATTGCTTTTAGTTTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

313

Amino Acids

35.67

Weight (kDa)

9.77

Isoelectric Point (pI)

41.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 35 - 296 3.6e-33 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 453
AciI CCGC 1 cut(s) 119
AclWI GGATC 4 cut(s) 43, 352, 365, 689
AcoI YGGCCR 2 cut(s) 258, 603
AcsI RAATTY 1 cut(s) 189
AfiI CCNNNNNNNGG 3 cut(s) 131, 502, 662
AgsI TTSAA 6 cut(s) 75, 476, 573, 616, 755, 923
AjnI CCWGG 3 cut(s) 38, 106, 605
AjuI GAANNNNNNNTTGG 2 cut(s) 803, 835
AluBI AGCT 5 cut(s) 100, 409, 530, 781, 862
AluI AGCT 5 cut(s) 100, 409, 530, 781, 862
Alw21I GWGCWC 1 cut(s) 864
Alw26I GTCTC 1 cut(s) 370
AlwI GGATC 4 cut(s) 43, 352, 365, 689
Ama87I CYCGRG 1 cut(s) 589
AoxI GGCC 3 cut(s) 196, 258, 603
ApeKI GCWGC 2 cut(s) 492, 527
ApoI RAATTY 1 cut(s) 189
AspS9I GGNCC 2 cut(s) 110, 197
AsuHPI GGTGA 5 cut(s) 28, 164, 326, 360, 526
AvaI CYCGRG 1 cut(s) 589
AvaII GGWCC 1 cut(s) 110
BalI TGGCCA 2 cut(s) 260, 605
BamHI GGATCC 1 cut(s) 357
BanII GRGCYC 2 cut(s) 328, 864
Bbv12I GWGCWC 1 cut(s) 864
BbvI GCAGC 2 cut(s) 504, 539
BciT130I CCWGG 3 cut(s) 40, 108, 607
BciVI GTATCC 1 cut(s) 817
BclI TGATCA 2 cut(s) 283, 331
BcoDI GTCTC 1 cut(s) 370
BfuAI ACCTGC 1 cut(s) 453
BfuI GTATCC 1 cut(s) 817
BisI GCNGC 2 cut(s) 493, 528
BlsI GCNGC 2 cut(s) 494, 529
Bme1390I CCNGG 3 cut(s) 40, 108, 607
Bme18I GGWCC 1 cut(s) 110
BmeT110I CYCGRG 1 cut(s) 589
BmgT120I GGNCC 2 cut(s) 110, 197
BmiI GGNNCC 1 cut(s) 359
BmrFI CCNGG 3 cut(s) 40, 108, 607
BmsI GCATC 3 cut(s) 414, 421, 615
BpmI CTGGAG 2 cut(s) 31, 397
Bpu10I CCTNAGC 1 cut(s) 683
BsaJI CCNNGG 4 cut(s) 130, 255, 353, 606
Bsc4I CCNNNNNNNGG 3 cut(s) 131, 502, 662
Bse1I ACTGG 1 cut(s) 897
BseBI CCWGG 3 cut(s) 40, 108, 607
BseDI CCNNGG 4 cut(s) 130, 255, 353, 606
BseLI CCNNNNNNNGG 3 cut(s) 131, 502, 662
BseMII CTCAG 3 cut(s) 419, 488, 773
BseNI ACTGG 1 cut(s) 897
BseRI GAGGAG 2 cut(s) 50, 872
BseXI GCAGC 2 cut(s) 504, 539
BshFI GGCC 3 cut(s) 198, 260, 605
BsiHKAI GWGCWC 1 cut(s) 864
BsiHKCI CYCGRG 1 cut(s) 589
BslFI GGGAC 2 cut(s) 193, 680
BslI CCNNNNNNNGG 3 cut(s) 131, 502, 662
BsmAI GTCTC 1 cut(s) 370
BsmFI GGGAC 2 cut(s) 193, 680
BsnI GGCC 3 cut(s) 198, 260, 605
BsoBI CYCGRG 1 cut(s) 589
Bsp1286I GDGCHC 2 cut(s) 328, 864
Bsp143I GATC 6 cut(s) 48, 283, 331, 357, 639, 694
Bsp19I CCATGG 2 cut(s) 255, 353
BspACI CCGC 1 cut(s) 119
BspANI GGCC 3 cut(s) 198, 260, 605
BspCNI CTCAG 3 cut(s) 418, 489, 774
BspLI GGNNCC 1 cut(s) 359
BspMI ACCTGC 1 cut(s) 453
BspPI GGATC 4 cut(s) 43, 352, 365, 689
BsrI ACTGG 1 cut(s) 897
BssECI CCNNGG 4 cut(s) 130, 255, 353, 606
BssMI GATC 6 cut(s) 48, 283, 331, 357, 639, 694
BssT1I CCWWGG 2 cut(s) 255, 353
Bst2UI CCWGG 3 cut(s) 40, 108, 607
Bst4CI ACNGT 1 cut(s) 854
BstC8I GCNNGC 1 cut(s) 350
BstDEI CTNAG 5 cut(s) 386, 405, 497, 683, 782
BstDSI CCRYGG 2 cut(s) 255, 353
BstEII GGTNACC 1 cut(s) 226
BstKTI GATC 6 cut(s) 51, 286, 334, 360, 642, 697
BstMAI GTCTC 1 cut(s) 370
BstMBI GATC 6 cut(s) 48, 283, 331, 357, 639, 694
BstMWI GCNNNNNNNGC 1 cut(s) 182
BstNI CCWGG 3 cut(s) 40, 108, 607
BstPI GGTNACC 1 cut(s) 226
BstSCI CCNGG 3 cut(s) 38, 106, 605
BstV1I GCAGC 2 cut(s) 504, 539
BstX2I RGATCY 1 cut(s) 357
BstXI CCANNNNNNTGG 2 cut(s) 194, 344
BstYI RGATCY 1 cut(s) 357
BsuI GTATCC 1 cut(s) 817
BsuRI GGCC 3 cut(s) 198, 260, 605
BtgI CCRYGG 2 cut(s) 255, 353
BtsIMutI CAGTG 1 cut(s) 859
BveI ACCTGC 1 cut(s) 453
Cac8I GCNNGC 1 cut(s) 350
Cfr13I GGNCC 2 cut(s) 110, 197
CseI GACGC 1 cut(s) 459
CsiI ACCWGGT 1 cut(s) 106
CviAII CATG 5 cut(s) 194, 256, 271, 281, 354
DdeI CTNAG 5 cut(s) 386, 405, 497, 683, 782
DpnI GATC 6 cut(s) 50, 285, 333, 359, 641, 696
DpnII GATC 6 cut(s) 48, 283, 331, 357, 639, 694
EaeI YGGCCR 2 cut(s) 258, 603
Ecl136II GAGCTC 1 cut(s) 862
Eco130I CCWWGG 2 cut(s) 255, 353
Eco24I GRGCYC 2 cut(s) 328, 864
Eco47I GGWCC 1 cut(s) 110
Eco53kI GAGCTC 1 cut(s) 862
Eco88I CYCGRG 1 cut(s) 589
Eco91I GGTNACC 1 cut(s) 226
EcoICRI GAGCTC 1 cut(s) 862
EcoO65I GGTNACC 1 cut(s) 226
EcoRII CCWGG 3 cut(s) 38, 106, 605
EcoT14I CCWWGG 2 cut(s) 255, 353
EcoT22I ATGCAT 1 cut(s) 630
EcoT38I GRGCYC 2 cut(s) 328, 864
ErhI CCWWGG 2 cut(s) 255, 353
FaeI CATG 5 cut(s) 197, 259, 274, 284, 357
FaqI GGGAC 2 cut(s) 193, 680
FatI CATG 5 cut(s) 193, 255, 270, 280, 353
FbaI TGATCA 2 cut(s) 283, 331
Fnu4HI GCNGC 2 cut(s) 493, 528
FriOI GRGCYC 2 cut(s) 328, 864
Fsp4HI GCNGC 2 cut(s) 493, 528
GluI GCNGC 2 cut(s) 493, 528
GsuI CTGGAG 2 cut(s) 31, 397
HaeIII GGCC 3 cut(s) 198, 260, 605
HgaI GACGC 1 cut(s) 459
Hin1II CATG 5 cut(s) 197, 259, 274, 284, 357
HincII GTYRAC 1 cut(s) 514
HindII GTYRAC 1 cut(s) 514
HindIII AAGCTT 1 cut(s) 98
HinfI GANTC 3 cut(s) 314, 476, 797
HphI GGTGA 5 cut(s) 28, 164, 326, 360, 526
Hpy166II GTNNAC 2 cut(s) 25, 514
Hpy188I TCNGA 1 cut(s) 134
Hpy188III TCNNGA 3 cut(s) 10, 75, 376
Hpy8I GTNNAC 2 cut(s) 25, 514
Hpy99I CGWCG 1 cut(s) 453
HpyAV CCTTC 3 cut(s) 149, 705, 839
HpyCH4III ACNGT 1 cut(s) 854
HpyCH4V TGCA 4 cut(s) 274, 399, 628, 803
HpyF10VI GCNNNNNNNGC 1 cut(s) 182
HpyF3I CTNAG 5 cut(s) 386, 405, 497, 683, 782
Hsp92II CATG 5 cut(s) 197, 259, 274, 284, 357
Ksp22I TGATCA 2 cut(s) 283, 331
Kzo9I GATC 6 cut(s) 48, 283, 331, 357, 639, 694
LmnI GCTCC 3 cut(s) 463, 778, 859
Lsp1109I GCAGC 2 cut(s) 504, 539
LweI GCATC 3 cut(s) 414, 421, 615
MabI ACCWGGT 1 cut(s) 106
MaeIII GTNAC 2 cut(s) 152, 226
MalI GATC 6 cut(s) 50, 285, 333, 359, 641, 696
MboI GATC 6 cut(s) 48, 283, 331, 357, 639, 694
MboII GAAGA 5 cut(s) 237, 283, 700, 720, 857
MfeI CAATTG 2 cut(s) 573, 923
MflI RGATCY 1 cut(s) 357
MhlI GDGCHC 2 cut(s) 328, 864
MlsI TGGCCA 2 cut(s) 260, 605
MluCI AATT 6 cut(s) 69, 189, 287, 547, 573, 923
MluNI TGGCCA 2 cut(s) 260, 605
MmeI TCCRAC 3 cut(s) 321, 756, 801
Mox20I TGGCCA 2 cut(s) 260, 605
Mph1103I ATGCAT 1 cut(s) 630
MscI TGGCCA 2 cut(s) 260, 605
MseI TTAA 1 cut(s) 203
Msp20I TGGCCA 2 cut(s) 260, 605
MspR9I CCNGG 3 cut(s) 40, 108, 607
MunI CAATTG 2 cut(s) 573, 923
MvaI CCWGG 3 cut(s) 40, 108, 607
MwoI GCNNNNNNNGC 1 cut(s) 182
NcoI CCATGG 2 cut(s) 255, 353
NdeII GATC 6 cut(s) 48, 283, 331, 357, 639, 694
NlaIII CATG 5 cut(s) 197, 259, 274, 284, 357
NlaIV GGNNCC 1 cut(s) 359
NmuCI GTSAC 1 cut(s) 152
NsiI ATGCAT 1 cut(s) 630
PfeI GAWTC 3 cut(s) 314, 476, 797
PkrI GCNGC 2 cut(s) 494, 529
Psp124BI GAGCTC 1 cut(s) 864
Psp6I CCWGG 3 cut(s) 38, 106, 605
PspEI GGTNACC 1 cut(s) 226
PspGI CCWGG 3 cut(s) 38, 106, 605
PspN4I GGNNCC 1 cut(s) 359
PspPI GGNCC 2 cut(s) 110, 197
PsuI RGATCY 1 cut(s) 357
SacI GAGCTC 1 cut(s) 864
SaqAI TTAA 1 cut(s) 203
SatI GCNGC 2 cut(s) 493, 528
Sau3AI GATC 6 cut(s) 48, 283, 331, 357, 639, 694
Sau96I GGNCC 2 cut(s) 110, 197
ScrFI CCNGG 3 cut(s) 40, 108, 607
SduI GDGCHC 2 cut(s) 328, 864
SexAI ACCWGGT 1 cut(s) 106
SfaNI GCATC 3 cut(s) 414, 421, 615
SinI GGWCC 1 cut(s) 110
Sse9I AATT 6 cut(s) 69, 189, 287, 547, 573, 923
SsiI CCGC 1 cut(s) 119
SspI AATATT 1 cut(s) 634
SstI GAGCTC 1 cut(s) 864
StyD4I CCNGG 3 cut(s) 38, 106, 605
StyI CCWWGG 2 cut(s) 255, 353
TaaI ACNGT 1 cut(s) 854
TaqI TCGA 3 cut(s) 322, 642, 791
TasI AATT 6 cut(s) 69, 189, 287, 547, 573, 923
TfiI GAWTC 3 cut(s) 314, 476, 797
Tru1I TTAA 1 cut(s) 203
Tru9I TTAA 1 cut(s) 203
TscAI CASTG 1 cut(s) 859
TseFI GTSAC 1 cut(s) 152
TseI GCWGC 2 cut(s) 492, 527
Tsp45I GTSAC 1 cut(s) 152
TspDTI ATGAA 5 cut(s) 17, 182, 237, 877, 905
TspRI CASTG 1 cut(s) 859
VpaK11BI GGWCC 1 cut(s) 110
XapI RAATTY 1 cut(s) 189
Zsp2I ATGCAT 1 cut(s) 630
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.