RchiOBHm_Chr7g0200291

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0001080
Physical Location & Seq
Forward (+)
18093137 .. 18096469
3333 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17926

Sequence Viewer

Length: 474 bp
ATGGTCAGATGCACCTCACAATTAGAACTTTGCGAAGTAATTGGCAAAGGCAATCCAGTCGAGGAATTGGATATTGCTAGACTACCTTACTTGCAAGCCATTATCAAAGAAACTTTTCGTTTGCACCAAGGTCCTTTCTTACTTCCCCGAAAAGCCGAGTTAAAAGTAGAAATTGAAGGCTTGACAATCCCAAACGGCGCACAAGTGCTTGTGAACGTATGGGCCATTGGCAGGGACCCAACCCTATGGGATGACCCATATTCATTCAAGCCGAATAGGTTCTTGGGGTTTTGTTTCTTATTACTGTTTATGATTCAAGTGATTACTGTTTCAGAAGATTTGTGTTTCAGAATGTGTCCTGGATTGCCGTTGGCAATGAGAATGTTGCACTTAATGTTGGGATCTCTTATCCATTCATTTGTTTGGAAGCTTGAAGATGGAGTTACACCAGAGAACATGAACATATATGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

157

Amino Acids

17.91

Weight (kDa)

5.59

Isoelectric Point (pI)

28.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 8 - 95 2.2e-26 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 409
AfiI CCNNNNNNNGG 1 cut(s) 231
AgsI TTSAA 4 cut(s) 176, 268, 317, 434
AjnI CCWGG 1 cut(s) 358
AjuI GAANNNNNNNTTGG 2 cut(s) 266, 298
AluBI AGCT 1 cut(s) 430
AluI AGCT 1 cut(s) 430
AlwI GGATC 1 cut(s) 409
AoxI GGCC 1 cut(s) 222
Asp700I GAANNNNTTC 2 cut(s) 114, 278
AspLEI GCGC 1 cut(s) 200
AspS9I GGNCC 3 cut(s) 131, 222, 235
AvaII GGWCC 2 cut(s) 131, 235
BccI CCATC 1 cut(s) 431
BceAI ACGGC 2 cut(s) 211, 352
BcgI CGANNNNNNTGC 2 cut(s) 40, 74
BciT130I CCWGG 1 cut(s) 360
BfaI CTAG 1 cut(s) 78
Bme1390I CCNGG 1 cut(s) 360
Bme18I GGWCC 2 cut(s) 131, 235
BmgT120I GGNCC 3 cut(s) 131, 222, 235
BmiI GGNNCC 2 cut(s) 236, 237
BmrFI CCNGG 1 cut(s) 360
BsaJI CCNNGG 1 cut(s) 127
Bsc4I CCNNNNNNNGG 1 cut(s) 231
Bse1I ACTGG 1 cut(s) 56
Bse3DI GCAATG 1 cut(s) 381
BseBI CCWGG 1 cut(s) 360
BseDI CCNNGG 1 cut(s) 127
BseGI GGATG 1 cut(s) 256
BseLI CCNNNNNNNGG 1 cut(s) 231
BseMI GCAATG 1 cut(s) 381
BseNI ACTGG 1 cut(s) 56
BshFI GGCC 1 cut(s) 224
BslFI GGGAC 1 cut(s) 248
BslI CCNNNNNNNGG 1 cut(s) 231
BsmFI GGGAC 1 cut(s) 248
BsnI GGCC 1 cut(s) 224
Bsp143I GATC 1 cut(s) 401
BspANI GGCC 1 cut(s) 224
BspLI GGNNCC 2 cut(s) 236, 237
BspPI GGATC 1 cut(s) 409
BsrDI GCAATG 1 cut(s) 381
BsrI ACTGG 1 cut(s) 56
BssECI CCNNGG 1 cut(s) 127
BssMI GATC 1 cut(s) 401
BssT1I CCWWGG 1 cut(s) 127
Bst2UI CCWGG 1 cut(s) 360
Bst4CI ACNGT 2 cut(s) 306, 328
BstC8I GCNNGC 1 cut(s) 96
BstF5I GGATG 1 cut(s) 256
BstHHI GCGC 1 cut(s) 200
BstKTI GATC 1 cut(s) 404
BstMBI GATC 1 cut(s) 401
BstNI CCWGG 1 cut(s) 360
BstSCI CCNGG 1 cut(s) 358
BstX2I RGATCY 1 cut(s) 401
BstXI CCANNNNNNTGG 1 cut(s) 246
BstYI RGATCY 1 cut(s) 401
BsuRI GGCC 1 cut(s) 224
BtsCI GGATG 1 cut(s) 256
Cac8I GCNNGC 1 cut(s) 96
CfoI GCGC 1 cut(s) 200
Cfr13I GGNCC 3 cut(s) 131, 222, 235
CviAII CATG 1 cut(s) 457
CviJI RGCY 6 cut(s) 98, 155, 180, 224, 271, 430
CviKI_1 RGCY 6 cut(s) 98, 155, 180, 224, 271, 430
DpnI GATC 1 cut(s) 403
DpnII GATC 1 cut(s) 401
Eco130I CCWWGG 1 cut(s) 127
Eco47I GGWCC 2 cut(s) 131, 235
EcoO109I RGGNCCY 2 cut(s) 131, 235
EcoRII CCWGG 1 cut(s) 358
EcoT14I CCWWGG 1 cut(s) 127
ErhI CCWWGG 1 cut(s) 127
FaeI CATG 1 cut(s) 460
FaiI YATR 8 cut(s) 220, 247, 259, 311, 458, 464, 466, 468
FaqI GGGAC 1 cut(s) 248
FatI CATG 1 cut(s) 456
FokI GGATG 1 cut(s) 263
FspBI CTAG 1 cut(s) 78
GlaI GCGC 1 cut(s) 199
HaeIII GGCC 1 cut(s) 224
HhaI GCGC 1 cut(s) 200
Hin1II CATG 1 cut(s) 460
Hin6I GCGC 1 cut(s) 198
HinP1I GCGC 1 cut(s) 198
HindIII AAGCTT 1 cut(s) 428
HinfI GANTC 1 cut(s) 313
Hpy166II GTNNAC 1 cut(s) 214
Hpy188I TCNGA 3 cut(s) 8, 334, 350
Hpy8I GTNNAC 1 cut(s) 214
HpyAV CCTTC 1 cut(s) 170
HpyCH4III ACNGT 2 cut(s) 306, 328
HpyCH4IV ACGT 1 cut(s) 216
HpyCH4V TGCA 4 cut(s) 12, 94, 124, 388
HpySE526I ACGT 1 cut(s) 216
Hsp92II CATG 1 cut(s) 460
HspAI GCGC 1 cut(s) 198
KflI GGGWCCC 1 cut(s) 235
Kzo9I GATC 1 cut(s) 401
LpnPI CCDG 5 cut(s) 69, 217, 345, 372, 462
MaeI CTAG 1 cut(s) 78
MaeII ACGT 1 cut(s) 216
MaeIII GTNAC 1 cut(s) 442
MalI GATC 1 cut(s) 403
MboI GATC 1 cut(s) 401
MboII GAAGA 2 cut(s) 347, 446
MflI RGATCY 1 cut(s) 401
MluCI AATT 4 cut(s) 20, 39, 65, 171
MnlI CCTC 2 cut(s) 25, 55
MroXI GAANNNNTTC 2 cut(s) 114, 278
MseI TTAA 2 cut(s) 161, 392
MspR9I CCNGG 1 cut(s) 360
MvaI CCWGG 1 cut(s) 360
NdeII GATC 1 cut(s) 401
NlaIII CATG 1 cut(s) 460
NlaIV GGNNCC 2 cut(s) 236, 237
NmeAIII GCCGAG 1 cut(s) 181
PdmI GAANNNNTTC 2 cut(s) 114, 278
PfeI GAWTC 1 cut(s) 313
PfoI TCCNGGA 1 cut(s) 358
PpuMI RGGWCCY 2 cut(s) 131, 235
Psp5II RGGWCCY 2 cut(s) 131, 235
Psp6I CCWGG 1 cut(s) 358
PspGI CCWGG 1 cut(s) 358
PspN4I GGNNCC 2 cut(s) 236, 237
PspPI GGNCC 3 cut(s) 131, 222, 235
PspPPI RGGWCCY 2 cut(s) 131, 235
PsuI RGATCY 1 cut(s) 401
SaqAI TTAA 2 cut(s) 161, 392
Sau3AI GATC 1 cut(s) 401
Sau96I GGNCC 3 cut(s) 131, 222, 235
ScrFI CCNGG 1 cut(s) 360
SetI ASST 6 cut(s) 17, 88, 133, 219, 281, 432
SinI GGWCC 2 cut(s) 131, 235
Sse9I AATT 4 cut(s) 20, 39, 65, 171
SspMI CTAG 1 cut(s) 78
StyD4I CCNGG 1 cut(s) 358
StyI CCWWGG 1 cut(s) 127
TaaI ACNGT 2 cut(s) 306, 328
TaiI ACGT 1 cut(s) 219
TaqI TCGA 1 cut(s) 60
TasI AATT 4 cut(s) 20, 39, 65, 171
TfiI GAWTC 1 cut(s) 313
Tru1I TTAA 2 cut(s) 161, 392
Tru9I TTAA 2 cut(s) 161, 392
TspDTI ATGAA 3 cut(s) 252, 405, 473
VpaK11BI GGWCC 2 cut(s) 131, 235
XmnI GAANNNNTTC 2 cut(s) 114, 278
XspI CTAG 1 cut(s) 78
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.