Prupe.5G084700_v2.0.a1

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0001080
Physical Location & Seq
Reverse (-)
9705651 .. 9707682
2032 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G084700.1

Sequence Viewer

Length: 1503 bp
ATGGAGTTCTTAAGCAGTTTCCTTTATCTCATCCTCACCTGGACATTGATCCAAACCATCCTCTATTCAATTTCAAGAAGTCAAAAGAGCTCAAGACCAAAGCTTCCACCAGGACCAAAACCATTTCCATTGATTGGAAACCTGCTTCAACTTGGTGACAAGCCCCACAAGTCCCTTGCCGAACTTGCCAAAAAACATGGCCCTCTGATGAGCCTAAAACTAGGCAAAGTAACAGCCATTGTTGTTTCTTCAGCAGCCATGGCCAAAGAAGTCCTCCAAACCCATGACCAGTTCTTATCCAACCGAACAATCCCTGATTCGATTCGAGCTTATGATCACCACATTGTTGGCCTACCATGGATTCCAGTTTCAACCCTGTGGAGAAACCTTAGGAAAATATGCAACACCGAACTGTTTGCCAATAAAATGCTTGATTCTAACCAAAACCTCAGGCGCAATAAAGTGCAGGAGCTCATCGGACAAGTCCACAGAAGCAGCCAAGCTGATGAAGCAGTGGATATTGGGAGGGCAGCCTTCACAACAACACTGAATTTGTTGTCTAACACAATTTTTTCCATTGATTTGGCAAACCCAAGTTCTGAAATGGCCAGGGAGTTCCAGGAGATGGTGTGTAATATTATGATGGAGGCTGGGAAGCCAAATTTGGGGGACTATTTTCCTGTGCTTAGGAAGATTGATCTCCATGGCAGAAGGCAGAGGATGACAGGGTACTTTGGGAAGATTTTGGATCTGCTTGACAACATAGTCAACCAAAGGTTGAAGCTAAGAGAATTGCCTGGTTCTACAACAAAAGATGATTTGTTAGATACCCTTCTCAACATTACTGAGGAAAACAGTGAGGTGATCAACAAAAAAGAGATCTATCATCTGTTACTGGTTCTATTTGTTGCTGGATCAGACACAACTTCATCCACATTCCAATGGGCAATGGCAGAGCTATTGCACAGCCCTGAGGTTTTGTCAAAGGCCCAACTAGAGCTTGAACAAGTAATTGGCAAAGGCAACCCAGTTGAGGAATCAGACATTGCTAGACTGCCTTACCTGCAAGCCATAGTCAAAGAGACCTTCAGGTTGCACCCTGCAGTTCCTTTGTTACTTCCCCGAAAGGCGGGAGCAGACGTAGAAATCGAAGGATTCACAGTACCGAAGGGTGCACAAGTGCTTGTTAACACATGGGCTATTGGCAGAGACCCCAGCCTCTGGGATGAACCAAGTTCATTCAAGCCAGAGAGGTTCTTGGGGTCAGAAATTGATGTTAAAGGCCGGAACTTTGAGCTTATACCGTTTGGAGCTGGACGAAGAGTATGTCCTGGATTGCCATTGGCAATGAGAATGCTGCACTTAATGTTGGGTTCTCTTATCCATTCCTTTGATTGGAAGCTTGAAGATGGGGTCACACCAGAGAACATGAACATGGATGATAAGTTTGGCATCACCTTAGAGATGGCCCAATCCTTGCGAGCTGTCCCCGTCTCTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

501

Amino Acids

56.07

Weight (kDa)

7.22

Isoelectric Point (pI)

43.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 764
Acc36I ACCTGC 2 cut(s) 150, 1071
AccB7I CCANNNNNTGG 3 cut(s) 134, 625, 1221
AciI CCGC 1 cut(s) 1130
AclWI GGATC 3 cut(s) 43, 756, 922
AcoI YGGCCR 2 cut(s) 261, 606
AcsI RAATTY 2 cut(s) 550, 661
AcuI CTGAAG 2 cut(s) 234, 1072
AfaI GTAC 2 cut(s) 731, 1164
AfiI CCNNNNNNNGG 7 cut(s) 134, 625, 665, 1033, 1129, 1221, 1395
AflII CTTAAG 1 cut(s) 10
AgsI TTSAA 8 cut(s) 69, 75, 149, 372, 781, 1004, 1243, 1406
AjnI CCWGG 6 cut(s) 38, 109, 608, 618, 796, 1330
AjuI GAANNNNNNNTTGG 4 cut(s) 647, 679, 996, 1028
Alw21I GWGCWC 3 cut(s) 92, 474, 1177
Alw26I GTCTC 3 cut(s) 1076, 1203, 1498
Alw44I GTGCAC 1 cut(s) 1173
AlwI GGATC 3 cut(s) 43, 756, 922
AlwNI CAGNNNCTG 1 cut(s) 1221
AoxI GGCC 7 cut(s) 199, 261, 349, 606, 987, 1282, 1467
ApaLI GTGCAC 1 cut(s) 1173
ApeKI GCWGC 4 cut(s) 254, 495, 530, 1357
ApoI RAATTY 2 cut(s) 550, 661
ArsI GACNNNNNNTTYG 2 cut(s) 1312, 1344
AspLEI GCGC 1 cut(s) 456
AspS9I GGNCC 4 cut(s) 113, 200, 988, 1468
AsuHPI GGTGA 5 cut(s) 28, 167, 329, 874, 1447
AvaII GGWCC 1 cut(s) 113
AxyI CCTNAGG 3 cut(s) 389, 449, 972
BaeGI GKGCMC 1 cut(s) 1177
BalI TGGCCA 2 cut(s) 263, 608
BanII GRGCYC 2 cut(s) 92, 474
Bbv12I GWGCWC 3 cut(s) 92, 474, 1177
BbvI GCAGC 4 cut(s) 266, 507, 542, 1344
BccI CCATC 5 cut(s) 65, 619, 637, 1403, 1459
BcgI CGANNNNNNTGC 2 cut(s) 398, 432
BciT130I CCWGG 6 cut(s) 40, 111, 610, 620, 798, 1332
BclI TGATCA 2 cut(s) 334, 864
BcoDI GTCTC 3 cut(s) 1076, 1203, 1498
BfaI CTAG 3 cut(s) 221, 995, 1050
BfmI CTRYAG 1 cut(s) 1101
BfrI CTTAAG 1 cut(s) 10
BfuAI ACCTGC 2 cut(s) 150, 1071
BglII AGATCT 1 cut(s) 879
BisI GCNGC 4 cut(s) 255, 496, 531, 1358
BlsI GCNGC 4 cut(s) 256, 497, 532, 1359
Bme1390I CCNGG 6 cut(s) 40, 111, 610, 620, 798, 1332
Bme18I GGWCC 1 cut(s) 113
BmgT120I GGNCC 4 cut(s) 113, 200, 988, 1468
BmrFI CCNGG 6 cut(s) 40, 111, 610, 620, 798, 1332
BmrI ACTGGG 1 cut(s) 1022
BmsI GCATC 1 cut(s) 1461
BmuI ACTGGG 1 cut(s) 1022
Bpu10I CCTNAGC 1 cut(s) 686
BpuEI CTTGAG 1 cut(s) 76
BsaI GGTCTC 2 cut(s) 1076, 1203
BsaJI CCNNGG 4 cut(s) 258, 356, 609, 703
BsaXI ACNNNNNCTCC 4 cut(s) 614, 644, 1125, 1155
Bsc4I CCNNNNNNNGG 7 cut(s) 134, 625, 665, 1033, 1129, 1221, 1395
Bse1I ACTGG 4 cut(s) 289, 365, 900, 1028
Bse21I CCTNAGG 3 cut(s) 389, 449, 972
Bse3DI GCAATG 3 cut(s) 954, 1044, 1353
BseBI CCWGG 6 cut(s) 40, 111, 610, 620, 798, 1332
BseDI CCNNGG 4 cut(s) 258, 356, 609, 703
BseGI GGATG 6 cut(s) 30, 57, 726, 929, 1231, 1444
BseLI CCNNNNNNNGG 7 cut(s) 134, 625, 665, 1033, 1129, 1221, 1395
BseMI GCAATG 3 cut(s) 954, 1044, 1353
BseMII CTCAG 3 cut(s) 463, 837, 963
BseNI ACTGG 4 cut(s) 289, 365, 900, 1028
BseSI GKGCMC 1 cut(s) 1177
BseXI GCAGC 4 cut(s) 266, 507, 542, 1344
BseYI CCCAGC 2 cut(s) 650, 1214
BsgI GTGCAG 2 cut(s) 485, 1343
BshFI GGCC 7 cut(s) 201, 263, 351, 608, 989, 1284, 1469
BsiHKAI GWGCWC 3 cut(s) 92, 474, 1177
BsiSI CCGG 1 cut(s) 1285
BslFI GGGAC 3 cut(s) 157, 683, 1472
BslI CCNNNNNNNGG 7 cut(s) 134, 625, 665, 1033, 1129, 1221, 1395
BsmAI GTCTC 3 cut(s) 1076, 1203, 1498
BsmBI CGTCTC 1 cut(s) 1498
BsmFI GGGAC 3 cut(s) 157, 683, 1472
BsmI GAATGC 1 cut(s) 1359
BsnI GGCC 7 cut(s) 201, 263, 351, 608, 989, 1284, 1469
Bso31I GGTCTC 2 cut(s) 1076, 1203
Bsp1286I GDGCHC 3 cut(s) 92, 474, 1177
Bsp143I GATC 7 cut(s) 48, 334, 697, 748, 864, 879, 914
Bsp19I CCATGG 3 cut(s) 258, 356, 703
BspACI CCGC 1 cut(s) 1130
BspANI GGCC 7 cut(s) 201, 263, 351, 608, 989, 1284, 1469
BspCNI CTCAG 3 cut(s) 462, 838, 964
BspMAI CTGCAG 1 cut(s) 1105
BspMI ACCTGC 2 cut(s) 150, 1071
BspPI GGATC 3 cut(s) 43, 756, 922
BspTI CTTAAG 1 cut(s) 10
BspTNI GGTCTC 2 cut(s) 1076, 1203
BsrDI GCAATG 3 cut(s) 954, 1044, 1353
BsrI ACTGG 4 cut(s) 289, 365, 900, 1028
BssECI CCNNGG 4 cut(s) 258, 356, 609, 703
BssMI GATC 7 cut(s) 48, 334, 697, 748, 864, 879, 914
BssT1I CCWWGG 3 cut(s) 258, 356, 703
Bst2UI CCWGG 6 cut(s) 40, 111, 610, 620, 798, 1332
Bst4CI ACNGT 4 cut(s) 414, 857, 1162, 1305
Bst6I CTCTTC 1 cut(s) 1315
BstAFI CTTAAG 1 cut(s) 10
BstC8I GCNNGC 2 cut(s) 1068, 1482
BstDEI CTNAG 7 cut(s) 389, 449, 686, 785, 846, 972, 1459
BstDSI CCRYGG 3 cut(s) 258, 356, 703
BstF5I GGATG 6 cut(s) 30, 57, 726, 929, 1231, 1444
BstHHI GCGC 1 cut(s) 456
BstKTI GATC 7 cut(s) 51, 337, 700, 751, 867, 882, 917
BstMAI GTCTC 3 cut(s) 1076, 1203, 1498
BstMBI GATC 7 cut(s) 48, 334, 697, 748, 864, 879, 914
BstMWI GCNNNNNNNGC 4 cut(s) 185, 260, 509, 1063
BstNI CCWGG 6 cut(s) 40, 111, 610, 620, 798, 1332
BstSCI CCNGG 6 cut(s) 38, 109, 608, 618, 796, 1330
BstSFI CTRYAG 1 cut(s) 1101
BstSLI GKGCMC 1 cut(s) 1177
BstV1I GCAGC 4 cut(s) 266, 507, 542, 1344
BstX2I RGATCY 2 cut(s) 748, 879
BstXI CCANNNNNNTGG 2 cut(s) 347, 583
BstYI RGATCY 2 cut(s) 748, 879
Bsu36I CCTNAGG 3 cut(s) 389, 449, 972
BsuRI GGCC 7 cut(s) 201, 263, 351, 608, 989, 1284, 1469
BtgI CCRYGG 3 cut(s) 258, 356, 703
BtsCI GGATG 6 cut(s) 30, 57, 726, 929, 1231, 1444
BtsI GCAGTG 1 cut(s) 519
BtsIMutI CAGTG 3 cut(s) 519, 545, 862
BveI ACCTGC 2 cut(s) 150, 1071
Cac8I GCNNGC 2 cut(s) 1068, 1482
CaiI CAGNNNCTG 1 cut(s) 1221
CfoI GCGC 1 cut(s) 456
Cfr13I GGNCC 4 cut(s) 113, 200, 988, 1468
Csp6I GTAC 2 cut(s) 730, 1163
CviAII CATG 8 cut(s) 197, 259, 284, 357, 704, 1194, 1429, 1435
CviQI GTAC 2 cut(s) 730, 1163
DdeI CTNAG 7 cut(s) 389, 449, 686, 785, 846, 972, 1459
DpnI GATC 7 cut(s) 50, 336, 699, 750, 866, 881, 916
DpnII GATC 7 cut(s) 48, 334, 697, 748, 864, 879, 914
DrdI GACNNNNNNGTC 1 cut(s) 764
DseDI GACNNNNNNGTC 1 cut(s) 764
EaeI YGGCCR 2 cut(s) 261, 606
Eam1104I CTCTTC 1 cut(s) 1315
EarI CTCTTC 1 cut(s) 1315
Ecl136II GAGCTC 2 cut(s) 90, 472
Eco130I CCWWGG 3 cut(s) 258, 356, 703
Eco24I GRGCYC 2 cut(s) 92, 474
Eco31I GGTCTC 2 cut(s) 1076, 1203
Eco47I GGWCC 1 cut(s) 113
Eco53kI GAGCTC 2 cut(s) 90, 472
Eco57I CTGAAG 2 cut(s) 234, 1072
Eco81I CCTNAGG 3 cut(s) 389, 449, 972
EcoICRI GAGCTC 2 cut(s) 90, 472
EcoRII CCWGG 6 cut(s) 38, 109, 608, 618, 796, 1330
EcoT14I CCWWGG 3 cut(s) 258, 356, 703
EcoT38I GRGCYC 2 cut(s) 92, 474
ErhI CCWWGG 3 cut(s) 258, 356, 703
Esp3I CGTCTC 1 cut(s) 1498
FaeI CATG 8 cut(s) 200, 262, 287, 360, 707, 1197, 1432, 1438
FaqI GGGAC 3 cut(s) 157, 683, 1472
FatI CATG 8 cut(s) 196, 258, 283, 356, 703, 1193, 1428, 1434
FauI CCCGC 1 cut(s) 1123
FbaI TGATCA 2 cut(s) 334, 864
Fnu4HI GCNGC 4 cut(s) 255, 496, 531, 1358
FokI GGATG 6 cut(s) 17, 44, 733, 916, 1238, 1451
FriOI GRGCYC 2 cut(s) 92, 474
Fsp4HI GCNGC 4 cut(s) 255, 496, 531, 1358
FspBI CTAG 3 cut(s) 221, 995, 1050
GlaI GCGC 1 cut(s) 455
GluI GCNGC 4 cut(s) 255, 496, 531, 1358
GsaI CCCAGC 2 cut(s) 654, 1218
HaeIII GGCC 7 cut(s) 201, 263, 351, 608, 989, 1284, 1469
HapII CCGG 1 cut(s) 1285
HhaI GCGC 1 cut(s) 456
Hin1II CATG 8 cut(s) 200, 262, 287, 360, 707, 1197, 1432, 1438
Hin6I GCGC 1 cut(s) 454
HinP1I GCGC 1 cut(s) 454
HincII GTYRAC 2 cut(s) 769, 1189
HindII GTYRAC 2 cut(s) 769, 1189
HindIII AAGCTT 2 cut(s) 101, 1400
HinfI GANTC 6 cut(s) 317, 322, 361, 434, 1037, 1155
HpaI GTTAAC 1 cut(s) 1189
HpaII CCGG 1 cut(s) 1285
HphI GGTGA 5 cut(s) 28, 167, 329, 874, 1447
Hpy166II GTNNAC 4 cut(s) 487, 769, 1175, 1189
Hpy188I TCNGA 6 cut(s) 207, 479, 601, 919, 1042, 1267
Hpy188III TCNNGA 2 cut(s) 75, 93
Hpy8I GTNNAC 4 cut(s) 487, 769, 1175, 1189
HpyAV CCTTC 6 cut(s) 544, 705, 842, 1096, 1145, 1162
HpyCH4III ACNGT 4 cut(s) 414, 857, 1162, 1305
HpyCH4IV ACGT 1 cut(s) 1140
HpyCH4V TGCA 8 cut(s) 402, 466, 964, 1066, 1096, 1103, 1175, 1360
HpyF10VI GCNNNNNNNGC 4 cut(s) 185, 260, 509, 1063
HpyF3I CTNAG 7 cut(s) 389, 449, 686, 785, 846, 972, 1459
HpySE526I ACGT 1 cut(s) 1140
Hsp92II CATG 8 cut(s) 200, 262, 287, 360, 707, 1197, 1432, 1438
HspAI GCGC 1 cut(s) 454
Ksp22I TGATCA 2 cut(s) 334, 864
KspAI GTTAAC 1 cut(s) 1189
Kzo9I GATC 7 cut(s) 48, 334, 697, 748, 864, 879, 914
LmnI GCTCC 3 cut(s) 469, 1133, 1310
Lsp1109I GCAGC 4 cut(s) 266, 507, 542, 1344
LweI GCATC 1 cut(s) 1461
MaeI CTAG 3 cut(s) 221, 995, 1050
MaeII ACGT 1 cut(s) 1140
MaeIII GTNAC 5 cut(s) 155, 229, 891, 1113, 1414
MalI GATC 7 cut(s) 50, 336, 699, 750, 866, 881, 916
MboI GATC 7 cut(s) 48, 334, 697, 748, 864, 879, 914
MboII GAAGA 5 cut(s) 240, 703, 751, 1332, 1418
MflI RGATCY 2 cut(s) 748, 879
MhlI GDGCHC 3 cut(s) 92, 474, 1177
MlsI TGGCCA 2 cut(s) 263, 608
MluCI AATT 7 cut(s) 69, 550, 567, 661, 791, 1011, 1269
MluNI TGGCCA 2 cut(s) 263, 608
MmeI TCCRAC 1 cut(s) 324
Mox20I TGGCCA 2 cut(s) 263, 608
MscI TGGCCA 2 cut(s) 263, 608
MseI TTAA 4 cut(s) 11, 1188, 1278, 1364
MslI CAYNNNNRTG 2 cut(s) 940, 1433
Msp20I TGGCCA 2 cut(s) 263, 608
MspCI CTTAAG 1 cut(s) 10
MspI CCGG 1 cut(s) 1285
MspR9I CCNGG 6 cut(s) 40, 111, 610, 620, 798, 1332
Mva1269I GAATGC 1 cut(s) 1359
MvaI CCWGG 6 cut(s) 40, 111, 610, 620, 798, 1332
MwoI GCNNNNNNNGC 4 cut(s) 185, 260, 509, 1063
NcoI CCATGG 3 cut(s) 258, 356, 703
NdeII GATC 7 cut(s) 48, 334, 697, 748, 864, 879, 914
NlaIII CATG 8 cut(s) 200, 262, 287, 360, 707, 1197, 1432, 1438
NmuCI GTSAC 2 cut(s) 155, 1414
PcsI WCGNNNNNNNCGW 1 cut(s) 1146
PctI GAATGC 1 cut(s) 1359
PfeI GAWTC 6 cut(s) 317, 322, 361, 434, 1037, 1155
PflMI CCANNNNNTGG 3 cut(s) 134, 625, 1221
PfoI TCCNGGA 2 cut(s) 618, 1330
PkrI GCNGC 4 cut(s) 256, 497, 532, 1359
Psp124BI GAGCTC 2 cut(s) 92, 474
Psp6I CCWGG 6 cut(s) 38, 109, 608, 618, 796, 1330
PspFI CCCAGC 2 cut(s) 650, 1214
PspGI CCWGG 6 cut(s) 38, 109, 608, 618, 796, 1330
PspPI GGNCC 4 cut(s) 113, 200, 988, 1468
PstI CTGCAG 1 cut(s) 1105
PstNI CAGNNNCTG 1 cut(s) 1221
PsuI RGATCY 2 cut(s) 748, 879
RsaI GTAC 2 cut(s) 731, 1164
RsaNI GTAC 2 cut(s) 730, 1163
RseI CAYNNNNRTG 2 cut(s) 940, 1433
SacI GAGCTC 2 cut(s) 92, 474
SaqAI TTAA 4 cut(s) 11, 1188, 1278, 1364
SatI GCNGC 4 cut(s) 255, 496, 531, 1358
Sau3AI GATC 7 cut(s) 48, 334, 697, 748, 864, 879, 914
Sau96I GGNCC 4 cut(s) 113, 200, 988, 1468
ScrFI CCNGG 6 cut(s) 40, 111, 610, 620, 798, 1332
SduI GDGCHC 3 cut(s) 92, 474, 1177
SfaNI GCATC 1 cut(s) 1461
SfcI CTRYAG 1 cut(s) 1101
SinI GGWCC 1 cut(s) 113
SmiMI CAYNNNNRTG 2 cut(s) 940, 1433
SmlI CTYRAG 2 cut(s) 10, 91
SmoI CTYRAG 2 cut(s) 10, 91
Sse9I AATT 7 cut(s) 69, 550, 567, 661, 791, 1011, 1269
SsiI CCGC 1 cut(s) 1130
SspI AATATT 1 cut(s) 637
SspMI CTAG 3 cut(s) 221, 995, 1050
SstI GAGCTC 2 cut(s) 92, 474
StyD4I CCNGG 6 cut(s) 38, 109, 608, 618, 796, 1330
StyI CCWWGG 3 cut(s) 258, 356, 703
TaaI ACNGT 4 cut(s) 414, 857, 1162, 1305
TaiI ACGT 1 cut(s) 1143
TaqI TCGA 3 cut(s) 320, 325, 1149
TasI AATT 7 cut(s) 69, 550, 567, 661, 791, 1011, 1269
TfiI GAWTC 6 cut(s) 317, 322, 361, 434, 1037, 1155
Tru1I TTAA 4 cut(s) 11, 1188, 1278, 1364
Tru9I TTAA 4 cut(s) 11, 1188, 1278, 1364
TscAI CASTG 3 cut(s) 519, 552, 862
TseFI GTSAC 2 cut(s) 155, 1414
TseI GCWGC 4 cut(s) 254, 495, 530, 1357
Tsp45I GTSAC 2 cut(s) 155, 1414
TspDTI ATGAA 5 cut(s) 522, 918, 1227, 1242, 1445
TspRI CASTG 3 cut(s) 519, 552, 862
Van91I CCANNNNNTGG 3 cut(s) 134, 625, 1221
Vha464I CTTAAG 1 cut(s) 10
VneI GTGCAC 1 cut(s) 1173
VpaK11BI GGWCC 1 cut(s) 113
XapI RAATTY 2 cut(s) 550, 661
XspI CTAG 3 cut(s) 221, 995, 1050
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.